Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044311.01.T01 | XP_013445471.2 | 95.986 | 573 | 21 | 1 | 20 | 592 | 19 | 589 | 0 | 1086 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044311.01.T01 | Q9SHH0 | 70.951 | 568 | 165 | 0 | 19 | 586 | 20 | 587 | 0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880044307.01 | MsG0880044311.01 | 0.829873 | 4.034785e-55 | 4.182697e-52 |
| MsG0880044309.01 | MsG0880044311.01 | 0.899719 | 1.499251e-77 | 1.876209e-73 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044311.01.T01 | MTR_8g461380 | 95.812 | 573 | 22 | 1 | 20 | 592 | 19 | 589 | 0.0 | 1083 |
| MsG0880044311.01.T01 | MTR_2g035430 | 61.687 | 569 | 217 | 1 | 10 | 577 | 2 | 570 | 0.0 | 722 |
| MsG0880044311.01.T01 | MTR_8g089320 | 50.805 | 559 | 274 | 1 | 27 | 584 | 19 | 577 | 0.0 | 586 |
| MsG0880044311.01.T01 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 25 | 589 | 0.0 | 565 |
| MsG0880044311.01.T01 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 8 | 572 | 0.0 | 565 |
| MsG0880044311.01.T01 | MTR_1g030660 | 48.909 | 550 | 279 | 2 | 37 | 585 | 24 | 572 | 0.0 | 553 |
| MsG0880044311.01.T01 | MTR_6g034535 | 85.020 | 247 | 33 | 1 | 352 | 594 | 68 | 314 | 2.63e-147 | 428 |
| MsG0880044311.01.T01 | MTR_6g034535 | 66.667 | 96 | 7 | 1 | 106 | 201 | 19 | 89 | 3.29e-28 | 115 |
| MsG0880044311.01.T01 | MTR_8g089340 | 47.111 | 450 | 225 | 4 | 157 | 593 | 1 | 450 | 2.93e-135 | 402 |
| MsG0880044311.01.T01 | MTR_1g111740 | 39.859 | 567 | 323 | 4 | 37 | 588 | 7 | 570 | 3.54e-133 | 401 |
| MsG0880044311.01.T01 | MTR_4g099270 | 38.314 | 522 | 313 | 5 | 64 | 577 | 6 | 526 | 1.22e-106 | 332 |
| MsG0880044311.01.T01 | MTR_4g099270 | 41.114 | 377 | 218 | 2 | 40 | 412 | 3 | 379 | 6.61e-89 | 281 |
| MsG0880044311.01.T01 | MTR_4g099270 | 36.145 | 415 | 256 | 5 | 171 | 577 | 1 | 414 | 2.09e-77 | 252 |
| MsG0880044311.01.T01 | MTR_4g099270 | 40.132 | 304 | 178 | 2 | 40 | 339 | 3 | 306 | 1.74e-65 | 217 |
| MsG0880044311.01.T01 | MTR_7g007850 | 31.380 | 529 | 337 | 10 | 76 | 587 | 45 | 564 | 2.78e-64 | 221 |
| MsG0880044311.01.T01 | MTR_7g007850 | 29.910 | 555 | 341 | 11 | 76 | 587 | 45 | 594 | 6.07e-62 | 215 |
| MsG0880044311.01.T01 | MTR_6g027680 | 31.450 | 407 | 264 | 3 | 63 | 454 | 21 | 427 | 6.09e-62 | 215 |
| MsG0880044311.01.T01 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 5.59e-61 | 213 |
| MsG0880044311.01.T01 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 1.11e-60 | 213 |
| MsG0880044311.01.T01 | MTR_6g027660 | 31.034 | 406 | 265 | 3 | 56 | 454 | 28 | 425 | 6.43e-60 | 211 |
| MsG0880044311.01.T01 | MTR_7g086510 | 31.593 | 383 | 255 | 3 | 79 | 454 | 37 | 419 | 3.09e-59 | 209 |
| MsG0880044311.01.T01 | MTR_6g027650 | 29.829 | 409 | 271 | 4 | 53 | 454 | 18 | 417 | 5.84e-59 | 208 |
| MsG0880044311.01.T01 | MTR_7g086610 | 31.771 | 384 | 251 | 4 | 80 | 454 | 32 | 413 | 3.61e-57 | 203 |
| MsG0880044311.01.T01 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 6.77e-56 | 197 |
| MsG0880044311.01.T01 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 7.07e-56 | 197 |
| MsG0880044311.01.T01 | MTR_6g027630 | 31.454 | 337 | 224 | 3 | 125 | 454 | 3 | 339 | 3.63e-49 | 179 |
| MsG0880044311.01.T01 | MTR_8g089342 | 57.265 | 117 | 50 | 0 | 30 | 146 | 23 | 139 | 2.03e-39 | 141 |
| MsG0880044311.01.T01 | MTR_6g027670 | 33.544 | 158 | 105 | 0 | 297 | 454 | 1 | 158 | 2.10e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044311.01.T01 | AT1G17120 | 70.951 | 568 | 165 | 0 | 19 | 586 | 20 | 587 | 0.0 | 820 |
| MsG0880044311.01.T01 | AT2G34960 | 62.679 | 560 | 206 | 3 | 20 | 577 | 4 | 562 | 0.0 | 733 |
| MsG0880044311.01.T01 | AT4G21120 | 51.494 | 569 | 274 | 2 | 28 | 594 | 18 | 586 | 0.0 | 596 |
| MsG0880044311.01.T01 | AT4G21120 | 49.771 | 436 | 217 | 2 | 161 | 594 | 1 | 436 | 2.92e-148 | 435 |
| MsG0880044311.01.T01 | AT5G04770 | 39.685 | 572 | 322 | 6 | 38 | 590 | 15 | 582 | 7.21e-130 | 393 |
| MsG0880044311.01.T01 | AT3G10600 | 40.179 | 560 | 310 | 8 | 35 | 576 | 11 | 563 | 1.48e-128 | 390 |
| MsG0880044311.01.T01 | AT5G04770 | 43.750 | 384 | 206 | 2 | 38 | 411 | 15 | 398 | 2.38e-98 | 306 |
| MsG0880044311.01.T01 | AT3G10600 | 37.900 | 438 | 247 | 8 | 171 | 590 | 1 | 431 | 5.10e-89 | 283 |
| MsG0880044311.01.T01 | AT5G04770 | 37.358 | 439 | 252 | 6 | 171 | 590 | 1 | 435 | 1.45e-84 | 271 |
| MsG0880044311.01.T01 | AT1G05940 | 30.970 | 536 | 332 | 9 | 76 | 584 | 44 | 568 | 1.58e-61 | 214 |
| MsG0880044311.01.T01 | AT5G36940 | 29.730 | 407 | 279 | 3 | 55 | 454 | 4 | 410 | 2.11e-60 | 211 |
| MsG0880044311.01.T01 | AT1G58030 | 29.897 | 388 | 265 | 3 | 74 | 454 | 34 | 421 | 3.69e-58 | 206 |
| MsG0880044311.01.T01 | AT1G05940 | 31.288 | 489 | 302 | 8 | 76 | 541 | 44 | 521 | 6.31e-57 | 200 |
| MsG0880044311.01.T01 | AT1G05940 | 32.663 | 398 | 260 | 3 | 76 | 466 | 44 | 440 | 3.23e-56 | 197 |
| MsG0880044311.01.T01 | AT3G03720 | 28.784 | 403 | 278 | 5 | 60 | 454 | 4 | 405 | 9.23e-54 | 193 |
| MsG0880044311.01.T01 | AT1G05940 | 29.231 | 455 | 283 | 8 | 156 | 584 | 9 | 450 | 3.56e-44 | 164 |
Find 131 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACCTATTGGTTTAAT+TGG | 0.145764 | 8:-39866146 | MsG0880044311.01.T01:CDS |
| CTTTATCATTGTTGCAAAAT+AGG | 0.159095 | 8:+39866508 | None:intergenic |
| TTCTTTCCTTACGGTGTTAA+AGG | 0.232045 | 8:-39866260 | MsG0880044311.01.T01:CDS |
| ATTAATAGGTGTTCCAGTTT+TGG | 0.242325 | 8:+39865860 | None:intergenic |
| GGCATTGGCACTTGTGAATA+TGG | 0.273952 | 8:-39866087 | MsG0880044311.01.T01:CDS |
| GGGACTGCGCTATGGAATTC+TGG | 0.274074 | 8:-39865621 | MsG0880044311.01.T01:CDS |
| GTTGTTGGTTCTTGTGTTGC+TGG | 0.281893 | 8:-39865642 | MsG0880044311.01.T01:CDS |
| GCCGTTGAAGTTCCTGTTGC+CGG | 0.312047 | 8:-39866647 | MsG0880044311.01.T01:CDS |
| CCAATGATCCCATGAGAAAA+AGG | 0.312755 | 8:+39865451 | None:intergenic |
| CCGGTTTGGAAAGATGGTTC+TGG | 0.322501 | 8:+39866965 | None:intergenic |
| AACAAAACCACAACGGCTAA+TGG | 0.322847 | 8:+39866422 | None:intergenic |
| GCACTTATTCATCCCAAAAC+TGG | 0.324146 | 8:-39865873 | MsG0880044311.01.T01:CDS |
| TTGCTTGTGAGGAGATATTA+TGG | 0.327696 | 8:-39865720 | MsG0880044311.01.T01:CDS |
| TTGTTCAAATTGGTATGAAA+TGG | 0.328124 | 8:-39866019 | MsG0880044311.01.T01:CDS |
| AACGGTTATTTATTGTTTGA+TGG | 0.330270 | 8:-39866108 | MsG0880044311.01.T01:CDS |
| TGACAACAAGTTTGCTTGTT+GGG | 0.330599 | 8:-39865959 | MsG0880044311.01.T01:CDS |
| GAGAGTCTGTTGATCGGTTT+AGG | 0.331137 | 8:+39866888 | None:intergenic |
| GAAGAGGCAACCGAAGGTTT+GGG | 0.333568 | 8:-39865520 | MsG0880044311.01.T01:CDS |
| TTCGGTAGGTTTCTCCGGTT+TGG | 0.334689 | 8:+39866951 | None:intergenic |
| CTGCCGGTCTCGGTCGTTCA+TGG | 0.340474 | 8:-39866535 | MsG0880044311.01.T01:CDS |
| TTTAGGTTCTTGATTTGTAC+TGG | 0.342607 | 8:-39865414 | MsG0880044311.01.T01:CDS |
| TCTGGTTTGTTTGGTTGGAT+TGG | 0.343362 | 8:-39865603 | MsG0880044311.01.T01:CDS |
| CTTGTTGGTGCTGCCGGTCT+CGG | 0.343843 | 8:-39866545 | MsG0880044311.01.T01:CDS |
| TGTTCAAATTGGTATGAAAT+GGG | 0.344658 | 8:-39866018 | MsG0880044311.01.T01:CDS |
| TTCGGCGCTGTCGTTGGTTC+CGG | 0.347948 | 8:-39866785 | MsG0880044311.01.T01:CDS |
| AGAAGAGGCAACCGAAGGTT+TGG | 0.353119 | 8:-39865521 | MsG0880044311.01.T01:CDS |
| CATGGGATCATTGGGTTATG+AGG | 0.363980 | 8:-39865442 | MsG0880044311.01.T01:CDS |
| ATTCTCCTTGAAGCTCTTGT+TGG | 0.364163 | 8:-39866560 | MsG0880044311.01.T01:CDS |
| CTATGGAATTCTGGTTTGTT+TGG | 0.375852 | 8:-39865612 | MsG0880044311.01.T01:CDS |
| CACCTTCCATTATCTCTTCA+CGG | 0.376508 | 8:+39865313 | None:intergenic |
| ATCAAACCGTGAAGAGATAA+TGG | 0.377043 | 8:-39865319 | MsG0880044311.01.T01:CDS |
| CTCGCTTTCGGCGCTGTCGT+TGG | 0.378647 | 8:-39866791 | MsG0880044311.01.T01:CDS |
| CTGGTTTGTTTGGTTGGATT+GGG | 0.380047 | 8:-39865602 | MsG0880044311.01.T01:CDS |
| CCTTCAAGAGATATACCTAT+TGG | 0.381314 | 8:-39866155 | MsG0880044311.01.T01:CDS |
| GTCAAAAGTGTAGCATTAAT+AGG | 0.382938 | 8:+39865846 | None:intergenic |
| GGAATTCTGGTTTGTTTGGT+TGG | 0.396442 | 8:-39865608 | MsG0880044311.01.T01:CDS |
| GACTTAACCTGGCTCGCTTT+CGG | 0.398071 | 8:-39866803 | MsG0880044311.01.T01:CDS |
| GGCGGTTCGGTAGGTTTCTC+CGG | 0.398229 | 8:+39866946 | None:intergenic |
| AAGTTTGCTTGTTGGGTCAA+TGG | 0.398278 | 8:-39865952 | MsG0880044311.01.T01:CDS |
| TTTCTTGCTTTCATTGCTGC+TGG | 0.398831 | 8:-39866587 | MsG0880044311.01.T01:CDS |
| AGCTGCGGCGGTGGTGGTCG+TGG | 0.399597 | 8:+39867033 | None:intergenic |
| GTTTCTCCGGTTTGGAAAGA+TGG | 0.404436 | 8:+39866959 | None:intergenic |
| GAAAACGAGCCACCGGCAAC+AGG | 0.406244 | 8:+39866635 | None:intergenic |
| ATACAGTTGCTGCTTGTGTT+TGG | 0.407814 | 8:-39865578 | MsG0880044311.01.T01:CDS |
| CTCCATCGCCAGTAGCTTCG+TGG | 0.408798 | 8:+39867004 | None:intergenic |
| GACAGCGCCGAAAGCGAGCC+AGG | 0.411784 | 8:+39866796 | None:intergenic |
| AATCACCGAGTTCGATTCTC+AGG | 0.413491 | 8:+39866609 | None:intergenic |
| ACGCTGCAGCTGTCGTGTAT+TGG | 0.414985 | 8:-39866229 | MsG0880044311.01.T01:CDS |
| TATTTATTGTTTGATGGCAT+TGG | 0.415152 | 8:-39866102 | MsG0880044311.01.T01:CDS |
| CCATGACTCGTTGCCTCACT+TGG | 0.415187 | 8:-39866829 | MsG0880044311.01.T01:CDS |
| GGTGGTGGTCGTGGAGGAGG+AGG | 0.415763 | 8:+39867042 | None:intergenic |
| AGTTTGCTTGTTGGGTCAAT+GGG | 0.420169 | 8:-39865951 | MsG0880044311.01.T01:CDS |
| ATTGAACCAATTAAACCAAT+AGG | 0.426832 | 8:+39866140 | None:intergenic |
| TTAACACCGTTCTTTCCTTA+CGG | 0.428643 | 8:-39866269 | MsG0880044311.01.T01:CDS |
| CCAATAGGTATATCTCTTGA+AGG | 0.429939 | 8:+39866155 | None:intergenic |
| TTGTTGGTTCTTGTGTTGCT+GGG | 0.430117 | 8:-39865641 | MsG0880044311.01.T01:CDS |
| GGTGGTCGTGGAGGAGGAGG+AGG | 0.431865 | 8:+39867045 | None:intergenic |
| ACCTTCGGTTGCCTCTTCTT+CGG | 0.433369 | 8:+39865525 | None:intergenic |
| CGCTGCATATGAGAGGATAA+TGG | 0.438614 | 8:+39866715 | None:intergenic |
| CCAGAACCATCTTTCCAAAC+CGG | 0.442083 | 8:-39866965 | MsG0880044311.01.T01:CDS |
| GGCGGTGGTGGTCGTGGAGG+AGG | 0.442173 | 8:+39867039 | None:intergenic |
| ATCCTCTCATATGCAGCGTC+AGG | 0.442530 | 8:-39866710 | MsG0880044311.01.T01:CDS |
| TCACTTGGTGGGACTTAACC+TGG | 0.456437 | 8:-39866814 | MsG0880044311.01.T01:CDS |
| TGCTTGTGAGGAGATATTAT+GGG | 0.457451 | 8:-39865719 | MsG0880044311.01.T01:CDS |
| GAAGCTCTTGTTGGTGCTGC+CGG | 0.460471 | 8:-39866551 | MsG0880044311.01.T01:CDS |
| TGGATCGAGCATATTGAAAC+CGG | 0.463832 | 8:+39866442 | None:intergenic |
| TGGTTCAATGTCTATGATAA+CGG | 0.465812 | 8:-39866126 | MsG0880044311.01.T01:CDS |
| GTCGTGTATTGGTCTTATAC+CGG | 0.481654 | 8:-39866218 | MsG0880044311.01.T01:CDS |
| TCCGGTATCTTCGTCGTCAC+CGG | 0.482639 | 8:-39866767 | MsG0880044311.01.T01:CDS |
| ACCGGTGACGACGAAGATAC+CGG | 0.483231 | 8:+39866766 | None:intergenic |
| CTTCAAAACCACGAAGCTAC+TGG | 0.483779 | 8:-39867012 | MsG0880044311.01.T01:CDS |
| GACTCGTTGCCTCACTTGGT+GGG | 0.485706 | 8:-39866825 | MsG0880044311.01.T01:CDS |
| ATGACAACAAGTTTGCTTGT+TGG | 0.486739 | 8:-39865960 | MsG0880044311.01.T01:CDS |
| TGACTCGTTGCCTCACTTGG+TGG | 0.488994 | 8:-39866826 | MsG0880044311.01.T01:CDS |
| CCAAGTGAGGCAACGAGTCA+TGG | 0.489696 | 8:+39866829 | None:intergenic |
| GCAACTTATGATGTGGATCA+TGG | 0.490232 | 8:-39865354 | MsG0880044311.01.T01:CDS |
| TATGATGTGGATCATGGAAT+TGG | 0.490780 | 8:-39865348 | MsG0880044311.01.T01:CDS |
| AGGTGTTTGCTAAGGCGGTT+CGG | 0.497696 | 8:+39866933 | None:intergenic |
| AGTTGCAACCATATCAAAAC+CGG | 0.498318 | 8:+39866199 | None:intergenic |
| CAAGAAGCTCGTTTCAATGC+TGG | 0.502149 | 8:-39866743 | MsG0880044311.01.T01:CDS |
| GTGAGTATTTGTGCTTTGAA+AGG | 0.502564 | 8:-39865984 | MsG0880044311.01.T01:CDS |
| CAGCACCAACAAGAGCTTCA+AGG | 0.507060 | 8:+39866555 | None:intergenic |
| ATAGTGTTAGGGCTAAACTA+TGG | 0.519584 | 8:+39865290 | None:intergenic |
| AAAACACCTTTAACACCGTA+AGG | 0.526823 | 8:+39866254 | None:intergenic |
| GTTCAAATTGGTATGAAATG+GGG | 0.527507 | 8:-39866017 | MsG0880044311.01.T01:CDS |
| GTTTGCTAAGGCGGTTCGGT+AGG | 0.533705 | 8:+39866937 | None:intergenic |
| GCTCGATCCATTAGCCGTTG+TGG | 0.536314 | 8:-39866429 | MsG0880044311.01.T01:CDS |
| CTGTTGATCGGTTTAGGAGA+CGG | 0.536854 | 8:+39866894 | None:intergenic |
| TGACCATGAACGACCGAGAC+CGG | 0.540172 | 8:+39866532 | None:intergenic |
| TGGCTATTGCATTGCTTGTG+AGG | 0.541304 | 8:-39865731 | MsG0880044311.01.T01:CDS |
| GTGTTGCTGGGACTGCGCTA+TGG | 0.541923 | 8:-39865629 | MsG0880044311.01.T01:CDS |
| ATTGAAACGAGCTTCTTGAC+CGG | 0.547155 | 8:+39866748 | None:intergenic |
| TGAGCAGGTGTTTGCTAAGG+CGG | 0.548053 | 8:+39866928 | None:intergenic |
| AAGAGGCAACCGAAGGTTTG+GGG | 0.551045 | 8:-39865519 | MsG0880044311.01.T01:CDS |
| TGAGTTTGCTTCCGAAGAAG+AGG | 0.551130 | 8:-39865536 | MsG0880044311.01.T01:CDS |
| TTGGGTCAATGGGACAAGCT+AGG | 0.554068 | 8:-39865941 | MsG0880044311.01.T01:CDS |
| ACGTGAGCAGGTGTTTGCTA+AGG | 0.555170 | 8:+39866925 | None:intergenic |
| ACTAACGGAATCGCGGCTAG+TGG | 0.559727 | 8:-39866395 | MsG0880044311.01.T01:CDS |
| TTCGTCGCAATTGACAATGA+TGG | 0.568799 | 8:+39865474 | None:intergenic |
| CAACGGATAAGAGTGATTTG+TGG | 0.572032 | 8:-39865689 | MsG0880044311.01.T01:CDS |
| GATGGCACCCACGGAACCAA+CGG | 0.573267 | 8:+39865492 | None:intergenic |
| TGCGGCGGTGGTGGTCGTGG+AGG | 0.574346 | 8:+39867036 | None:intergenic |
| ATTGACAATGATGGCACCCA+CGG | 0.576091 | 8:+39865483 | None:intergenic |
| AGAGGCAACCGAAGGTTTGG+GGG | 0.576184 | 8:-39865518 | MsG0880044311.01.T01:CDS |
| CAATAGGTATATCTCTTGAA+GGG | 0.579389 | 8:+39866156 | None:intergenic |
| CAGGAATGAAAACGAGCCAC+CGG | 0.587952 | 8:+39866628 | None:intergenic |
| GTTGAAGTTCCTGTTGCCGG+TGG | 0.592442 | 8:-39866644 | MsG0880044311.01.T01:CDS |
| GTTCATGAGAGTCTGTTGAT+CGG | 0.592871 | 8:+39866882 | None:intergenic |
| AAGTATAGTGAGATTGATGC+TGG | 0.595966 | 8:-39866062 | MsG0880044311.01.T01:CDS |
| GAGGAGGAGGAGGATGATGT+CGG | 0.597641 | 8:+39867055 | None:intergenic |
| TCCGAAGAAGAGGCAACCGA+AGG | 0.598435 | 8:-39865526 | MsG0880044311.01.T01:CDS |
| AACCACGAAGCTACTGGCGA+TGG | 0.600504 | 8:-39867006 | MsG0880044311.01.T01:CDS |
| GAGGAGGAGGATGATGTCGG+TGG | 0.603081 | 8:+39867058 | None:intergenic |
| GGATAAGAGTGATTTGTGGA+AGG | 0.603211 | 8:-39865685 | MsG0880044311.01.T01:CDS |
| ATATTATGGGAGGGAATCAA+CGG | 0.605663 | 8:-39865706 | MsG0880044311.01.T01:CDS |
| AACCGTGAAGAGATAATGGA+AGG | 0.615392 | 8:-39865315 | MsG0880044311.01.T01:CDS |
| GAGGCAACCGAAGGTTTGGG+GGG | 0.616110 | 8:-39865517 | MsG0880044311.01.T01:CDS |
| AGGTTAAGTCCCACCAAGTG+AGG | 0.616937 | 8:+39866816 | None:intergenic |
| AACCTGACGCTGCATATGAG+AGG | 0.617228 | 8:+39866708 | None:intergenic |
| TGTGAGGAGATATTATGGGA+GGG | 0.620522 | 8:-39865715 | MsG0880044311.01.T01:CDS |
| ACCGGCAACAGGAACTTCAA+CGG | 0.628727 | 8:+39866646 | None:intergenic |
| TTGTGAGGAGATATTATGGG+AGG | 0.634083 | 8:-39865716 | MsG0880044311.01.T01:CDS |
| GTTAATCACTAACGGAATCG+CGG | 0.635124 | 8:-39866402 | MsG0880044311.01.T01:CDS |
| TCATTCCTGAGAATCGAACT+CGG | 0.639210 | 8:-39866614 | MsG0880044311.01.T01:CDS |
| GGTACACTACTCAAATTGCA+AGG | 0.653655 | 8:-39865920 | MsG0880044311.01.T01:CDS |
| TTAACACCGTAAGGAAAGAA+CGG | 0.656749 | 8:+39866263 | None:intergenic |
| GCATATGAGAGGATAATGGA+AGG | 0.658306 | 8:+39866719 | None:intergenic |
| TGTTCATGCAACTTATGATG+TGG | 0.672047 | 8:-39865361 | MsG0880044311.01.T01:CDS |
| GATGAAAGCGGAAAGAAGAG+CGG | 0.683982 | 8:+39866682 | None:intergenic |
| GAATTCAGCGTAGATGAAAG+CGG | 0.686074 | 8:+39866670 | None:intergenic |
| AGTGATTAACAAAACCACAA+CGG | 0.729960 | 8:+39866415 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTACAACTTTTATTAT+CGG | - | Chr8:39866031-39866050 | MsG0880044311.01.T01:CDS | 15.0% |
| !!! | CTTTTGTATTATTTATTTGT+GGG | - | Chr8:39866982-39867001 | MsG0880044311.01.T01:CDS | 15.0% |
| !!! | GCTTTTGTATTATTTATTTG+TGG | - | Chr8:39866981-39867000 | MsG0880044311.01.T01:CDS | 20.0% |
| !!! | TCTTTTCATTTTTATGCTTA+TGG | - | Chr8:39866615-39866634 | MsG0880044311.01.T01:CDS | 20.0% |
| ! | AACGGTTATTTATTGTTTGA+TGG | - | Chr8:39866258-39866277 | MsG0880044311.01.T01:CDS | 25.0% |
| ! | ATTGAACCAATTAAACCAAT+AGG | + | Chr8:39866229-39866248 | None:intergenic | 25.0% |
| ! | CTTTATCATTGTTGCAAAAT+AGG | + | Chr8:39865861-39865880 | None:intergenic | 25.0% |
| ! | GAAAAACATCTATCTTAACA+TGG | - | Chr8:39865999-39866018 | MsG0880044311.01.T01:CDS | 25.0% |
| ! | TGTTCAAATTGGTATGAAAT+GGG | - | Chr8:39866348-39866367 | MsG0880044311.01.T01:CDS | 25.0% |
| ! | TTGTTCAAATTGGTATGAAA+TGG | - | Chr8:39866347-39866366 | MsG0880044311.01.T01:CDS | 25.0% |
| !! | TATTTATTGTTTGATGGCAT+TGG | - | Chr8:39866264-39866283 | MsG0880044311.01.T01:CDS | 25.0% |
| !!! | AGAACGATTCTGATTTTTTT+CGG | - | Chr8:39865879-39865898 | MsG0880044311.01.T01:CDS | 25.0% |
| !!! | ATCGGTTTTATTATTGTGAT+CGG | - | Chr8:39866049-39866068 | MsG0880044311.01.T01:CDS | 25.0% |
| !!! | CGAATTGATTCTTTTAAAAC+CGG | - | Chr8:39865905-39865924 | MsG0880044311.01.T01:CDS | 25.0% |
| !!! | CGGTTTTAAAAGAATCAATT+CGG | + | Chr8:39865907-39865926 | None:intergenic | 25.0% |
| !!! | GATATACCTATTGGTTTAAT+TGG | - | Chr8:39866220-39866239 | MsG0880044311.01.T01:CDS | 25.0% |
| !!! | TTGTGTTTGTTTTTTGTTGT+TGG | - | Chr8:39866709-39866728 | MsG0880044311.01.T01:CDS | 25.0% |
| AGTGATTAACAAAACCACAA+CGG | + | Chr8:39865954-39865973 | None:intergenic | 30.0% | |
| CAATAGGTATATCTCTTGAA+GGG | + | Chr8:39866213-39866232 | None:intergenic | 30.0% | |
| GGATGAATAAGTGCAAAAAA+GGG | + | Chr8:39866487-39866506 | None:intergenic | 30.0% | |
| GTTCAAATTGGTATGAAATG+GGG | - | Chr8:39866349-39866368 | MsG0880044311.01.T01:CDS | 30.0% | |
| TGGTTCAATGTCTATGATAA+CGG | - | Chr8:39866240-39866259 | MsG0880044311.01.T01:CDS | 30.0% | |
| ! | ATTAATAGGTGTTCCAGTTT+TGG | + | Chr8:39866509-39866528 | None:intergenic | 30.0% |
| ! | GTCAAAAGTGTAGCATTAAT+AGG | + | Chr8:39866523-39866542 | None:intergenic | 30.0% |
| ! | TGTTGCTCTTTTTACTAGTT+TGG | - | Chr8:39866561-39866580 | MsG0880044311.01.T01:CDS | 30.0% |
| ! | TTAATAGGTGTTCCAGTTTT+GGG | + | Chr8:39866508-39866527 | None:intergenic | 30.0% |
| ! | TTTTGATATGGTTGCAACTA+TGG | - | Chr8:39866171-39866190 | MsG0880044311.01.T01:CDS | 30.0% |
| !! | ATTGTGATCGGTTTTATACA+CGG | - | Chr8:39866061-39866080 | MsG0880044311.01.T01:CDS | 30.0% |
| !! | TTTAGGTTCTTGATTTGTAC+TGG | - | Chr8:39866952-39866971 | MsG0880044311.01.T01:CDS | 30.0% |
| !!! | GTGGTTTTGTTAATCACTAA+CGG | - | Chr8:39865956-39865975 | MsG0880044311.01.T01:CDS | 30.0% |
| !!! | TCAGTTGCTTTTGTTCAAAT+TGG | - | Chr8:39866337-39866356 | MsG0880044311.01.T01:CDS | 30.0% |
| AAAACACCTTTAACACCGTA+AGG | + | Chr8:39866115-39866134 | None:intergenic | 35.0% | |
| AAGTATAGTGAGATTGATGC+TGG | - | Chr8:39866304-39866323 | MsG0880044311.01.T01:CDS | 35.0% | |
| AGTTGCAACCATATCAAAAC+CGG | + | Chr8:39866170-39866189 | None:intergenic | 35.0% | |
| ATATTATGGGAGGGAATCAA+CGG | - | Chr8:39866660-39866679 | MsG0880044311.01.T01:CDS | 35.0% | |
| ATCAAACCGTGAAGAGATAA+TGG | - | Chr8:39867047-39867066 | MsG0880044311.01.T01:CDS | 35.0% | |
| CCAATAGGTATATCTCTTGA+AGG | + | Chr8:39866214-39866233 | None:intergenic | 35.0% | |
| CCTTCAAGAGATATACCTAT+TGG | - | Chr8:39866211-39866230 | MsG0880044311.01.T01:CDS | 35.0% | |
| GGGATGAATAAGTGCAAAAA+AGG | + | Chr8:39866488-39866507 | None:intergenic | 35.0% | |
| TATGATGTGGATCATGGAAT+TGG | - | Chr8:39867018-39867037 | MsG0880044311.01.T01:CDS | 35.0% | |
| TGAATAAGTGCAAAAAAGGG+TGG | + | Chr8:39866484-39866503 | None:intergenic | 35.0% | |
| TGCTTGTGAGGAGATATTAT+GGG | - | Chr8:39866647-39866666 | MsG0880044311.01.T01:CDS | 35.0% | |
| TGTTCATGCAACTTATGATG+TGG | - | Chr8:39867005-39867024 | MsG0880044311.01.T01:CDS | 35.0% | |
| TTAACACCGTAAGGAAAGAA+CGG | + | Chr8:39866106-39866125 | None:intergenic | 35.0% | |
| TTAACACCGTTCTTTCCTTA+CGG | - | Chr8:39866097-39866116 | MsG0880044311.01.T01:CDS | 35.0% | |
| TTGCTTGTGAGGAGATATTA+TGG | - | Chr8:39866646-39866665 | MsG0880044311.01.T01:CDS | 35.0% | |
| ! | ATGACAACAAGTTTGCTTGT+TGG | - | Chr8:39866406-39866425 | MsG0880044311.01.T01:CDS | 35.0% |
| ! | CTTTTTCTCATGGGATCATT+GGG | - | Chr8:39866916-39866935 | MsG0880044311.01.T01:CDS | 35.0% |
| ! | GTGAGTATTTGTGCTTTGAA+AGG | - | Chr8:39866382-39866401 | MsG0880044311.01.T01:CDS | 35.0% |
| ! | TGACAACAAGTTTGCTTGTT+GGG | - | Chr8:39866407-39866426 | MsG0880044311.01.T01:CDS | 35.0% |
| ! | TTCTTTCCTTACGGTGTTAA+AGG | - | Chr8:39866106-39866125 | MsG0880044311.01.T01:CDS | 35.0% |
| !! | CTATGGAATTCTGGTTTGTT+TGG | - | Chr8:39866754-39866773 | MsG0880044311.01.T01:CDS | 35.0% |
| !!! | ATGGAATTTTCACTGGCTTT+GGG | + | Chr8:39865521-39865540 | None:intergenic | 35.0% |
| !!! | GTCTTATACCGGTTTTGATA+TGG | - | Chr8:39866159-39866178 | MsG0880044311.01.T01:CDS | 35.0% |
| !!! | TGGGTTATGAGGCTTTTTTT+AGG | - | Chr8:39866935-39866954 | MsG0880044311.01.T01:CDS | 35.0% |
| AACAAAACCACAACGGCTAA+TGG | + | Chr8:39865947-39865966 | None:intergenic | 40.0% | |
| ATTCTCCTTGAAGCTCTTGT+TGG | - | Chr8:39865806-39865825 | MsG0880044311.01.T01:CDS | 40.0% | |
| ATTGAAACGAGCTTCTTGAC+CGG | + | Chr8:39865621-39865640 | None:intergenic | 40.0% | |
| CAACGGATAAGAGTGATTTG+TGG | - | Chr8:39866677-39866696 | MsG0880044311.01.T01:CDS | 40.0% | |
| CACCTTCCATTATCTCTTCA+CGG | + | Chr8:39867056-39867075 | None:intergenic | 40.0% | |
| CCAATGATCCCATGAGAAAA+AGG | + | Chr8:39866918-39866937 | None:intergenic | 40.0% | |
| GAATTCAGCGTAGATGAAAG+CGG | + | Chr8:39865699-39865718 | None:intergenic | 40.0% | |
| GCAACTTATGATGTGGATCA+TGG | - | Chr8:39867012-39867031 | MsG0880044311.01.T01:CDS | 40.0% | |
| GCACTTATTCATCCCAAAAC+TGG | - | Chr8:39866493-39866512 | MsG0880044311.01.T01:CDS | 40.0% | |
| GGTACACTACTCAAATTGCA+AGG | - | Chr8:39866446-39866465 | MsG0880044311.01.T01:CDS | 40.0% | |
| GTTAATCACTAACGGAATCG+CGG | - | Chr8:39865964-39865983 | MsG0880044311.01.T01:CDS | 40.0% | |
| GTTCATGAGAGTCTGTTGAT+CGG | + | Chr8:39865487-39865506 | None:intergenic | 40.0% | |
| TCATTCCTGAGAATCGAACT+CGG | - | Chr8:39865752-39865771 | MsG0880044311.01.T01:CDS | 40.0% | |
| TGGATCGAGCATATTGAAAC+CGG | + | Chr8:39865927-39865946 | None:intergenic | 40.0% | |
| TGTGAGGAGATATTATGGGA+GGG | - | Chr8:39866651-39866670 | MsG0880044311.01.T01:CDS | 40.0% | |
| TTCGTCGCAATTGACAATGA+TGG | + | Chr8:39866895-39866914 | None:intergenic | 40.0% | |
| TTGTGAGGAGATATTATGGG+AGG | - | Chr8:39866650-39866669 | MsG0880044311.01.T01:CDS | 40.0% | |
| TTTCTTGCTTTCATTGCTGC+TGG | - | Chr8:39865779-39865798 | MsG0880044311.01.T01:CDS | 40.0% | |
| ! | AAGTTTGCTTGTTGGGTCAA+TGG | - | Chr8:39866414-39866433 | MsG0880044311.01.T01:CDS | 40.0% |
| ! | ACGAGTCATGGAATTTTCAC+TGG | + | Chr8:39865528-39865547 | None:intergenic | 40.0% |
| ! | AGTTTGCTTGTTGGGTCAAT+GGG | - | Chr8:39866415-39866434 | MsG0880044311.01.T01:CDS | 40.0% |
| ! | ATACAGTTGCTGCTTGTGTT+TGG | - | Chr8:39866788-39866807 | MsG0880044311.01.T01:CDS | 40.0% |
| ! | CCTTTTTCTCATGGGATCAT+TGG | - | Chr8:39866915-39866934 | MsG0880044311.01.T01:CDS | 40.0% |
| ! | GGATAAGAGTGATTTGTGGA+AGG | - | Chr8:39866681-39866700 | MsG0880044311.01.T01:CDS | 40.0% |
| !! | AACCGTGAAGAGATAATGGA+AGG | - | Chr8:39867051-39867070 | MsG0880044311.01.T01:CDS | 40.0% |
| !! | CTGGTTTGTTTGGTTGGATT+GGG | - | Chr8:39866764-39866783 | MsG0880044311.01.T01:CDS | 40.0% |
| !! | GCATATGAGAGGATAATGGA+AGG | + | Chr8:39865650-39865669 | None:intergenic | 40.0% |
| !! | GGAATTCTGGTTTGTTTGGT+TGG | - | Chr8:39866758-39866777 | MsG0880044311.01.T01:CDS | 40.0% |
| !! | GTCGTGTATTGGTCTTATAC+CGG | - | Chr8:39866148-39866167 | MsG0880044311.01.T01:CDS | 40.0% |
| !! | TCTGGTTTGTTTGGTTGGAT+TGG | - | Chr8:39866763-39866782 | MsG0880044311.01.T01:CDS | 40.0% |
| !! | TTGTTGGTTCTTGTGTTGCT+GGG | - | Chr8:39866725-39866744 | MsG0880044311.01.T01:CDS | 40.0% |
| !!! | AATTTTCACTGGCTTTGGGA+AGG | + | Chr8:39865517-39865536 | None:intergenic | 40.0% |
| !!! | CATGGAATTTTCACTGGCTT+TGG | + | Chr8:39865522-39865541 | None:intergenic | 40.0% |
| !!! | TGCTGCTTGTGTTTGGTTTT+TGG | - | Chr8:39866795-39866814 | MsG0880044311.01.T01:CDS | 40.0% |
| AATCACCGAGTTCGATTCTC+AGG | + | Chr8:39865760-39865779 | None:intergenic | 45.0% | |
| ATTGACAATGATGGCACCCA+CGG | + | Chr8:39866886-39866905 | None:intergenic | 45.0% | |
| CAAGAAGCTCGTTTCAATGC+TGG | - | Chr8:39865623-39865642 | MsG0880044311.01.T01:CDS | 45.0% | |
| CATGGGATCATTGGGTTATG+AGG | - | Chr8:39866924-39866943 | MsG0880044311.01.T01:CDS | 45.0% | |
| CCAGAACCATCTTTCCAAAC+CGG | - | Chr8:39865401-39865420 | MsG0880044311.01.T01:CDS | 45.0% | |
| CGCTGCATATGAGAGGATAA+TGG | + | Chr8:39865654-39865673 | None:intergenic | 45.0% | |
| CTTCAAAACCACGAAGCTAC+TGG | - | Chr8:39865354-39865373 | MsG0880044311.01.T01:CDS | 45.0% | |
| GATGAAAGCGGAAAGAAGAG+CGG | + | Chr8:39865687-39865706 | None:intergenic | 45.0% | |
| TGGCTATTGCATTGCTTGTG+AGG | - | Chr8:39866635-39866654 | MsG0880044311.01.T01:CDS | 45.0% | |
| ! | CTGTTGATCGGTTTAGGAGA+CGG | + | Chr8:39865475-39865494 | None:intergenic | 45.0% |
| ! | GAGAGTCTGTTGATCGGTTT+AGG | + | Chr8:39865481-39865500 | None:intergenic | 45.0% |
| ! | GCGACGAACCTTTTTCTCAT+GGG | - | Chr8:39866907-39866926 | MsG0880044311.01.T01:CDS | 45.0% |
| ! | TGAGTTTGCTTCCGAAGAAG+AGG | - | Chr8:39866830-39866849 | MsG0880044311.01.T01:CDS | 45.0% |
| ! | TGCGACGAACCTTTTTCTCA+TGG | - | Chr8:39866906-39866925 | MsG0880044311.01.T01:CDS | 45.0% |
| !! | GGCATTGGCACTTGTGAATA+TGG | - | Chr8:39866279-39866298 | MsG0880044311.01.T01:CDS | 45.0% |
| !! | GTTGTTGGTTCTTGTGTTGC+TGG | - | Chr8:39866724-39866743 | MsG0880044311.01.T01:CDS | 45.0% |
| !! | GTTTCTCCGGTTTGGAAAGA+TGG | + | Chr8:39865410-39865429 | None:intergenic | 45.0% |
| AACCTGACGCTGCATATGAG+AGG | + | Chr8:39865661-39865680 | None:intergenic | 50.0% | |
| AAGAGGCAACCGAAGGTTTG+GGG | - | Chr8:39866847-39866866 | MsG0880044311.01.T01:CDS | 50.0% | |
| ACCGGCAACAGGAACTTCAA+CGG | + | Chr8:39865723-39865742 | None:intergenic | 50.0% | |
| ACCTTCGGTTGCCTCTTCTT+CGG | + | Chr8:39866844-39866863 | None:intergenic | 50.0% | |
| AGAAGAGGCAACCGAAGGTT+TGG | - | Chr8:39866845-39866864 | MsG0880044311.01.T01:CDS | 50.0% | |
| AGGTTAAGTCCCACCAAGTG+AGG | + | Chr8:39865553-39865572 | None:intergenic | 50.0% | |
| ATCCTCTCATATGCAGCGTC+AGG | - | Chr8:39865656-39865675 | MsG0880044311.01.T01:CDS | 50.0% | |
| CAGCACCAACAAGAGCTTCA+AGG | + | Chr8:39865814-39865833 | None:intergenic | 50.0% | |
| CAGGAATGAAAACGAGCCAC+CGG | + | Chr8:39865741-39865760 | None:intergenic | 50.0% | |
| GAAGAGGCAACCGAAGGTTT+GGG | - | Chr8:39866846-39866865 | MsG0880044311.01.T01:CDS | 50.0% | |
| TTCGGTAGGTTTCTCCGGTT+TGG | + | Chr8:39865418-39865437 | None:intergenic | 50.0% | |
| TTGGGTCAATGGGACAAGCT+AGG | - | Chr8:39866425-39866444 | MsG0880044311.01.T01:CDS | 50.0% | |
| ! | ACGGTCTTTTAGACGTGAGC+AGG | + | Chr8:39865456-39865475 | None:intergenic | 50.0% |
| ! | ACGTGAGCAGGTGTTTGCTA+AGG | + | Chr8:39865444-39865463 | None:intergenic | 50.0% |
| ! | AGGTGTTTGCTAAGGCGGTT+CGG | + | Chr8:39865436-39865455 | None:intergenic | 50.0% |
| ! | GACTTAACCTGGCTCGCTTT+CGG | - | Chr8:39865563-39865582 | MsG0880044311.01.T01:CDS | 50.0% |
| ! | TCACTTGGTGGGACTTAACC+TGG | - | Chr8:39865552-39865571 | MsG0880044311.01.T01:CDS | 50.0% |
| ! | TGAGCAGGTGTTTGCTAAGG+CGG | + | Chr8:39865441-39865460 | None:intergenic | 50.0% |
| !! | CCGGTTTGGAAAGATGGTTC+TGG | + | Chr8:39865404-39865423 | None:intergenic | 50.0% |
| !!! | GCTTCGTGGTTTTGAAGCTG+CGG | + | Chr8:39865351-39865370 | None:intergenic | 50.0% |
| AACCACGAAGCTACTGGCGA+TGG | - | Chr8:39865360-39865379 | MsG0880044311.01.T01:CDS | 55.0% | |
| AACGGAACCCCCCAAACCTT+CGG | + | Chr8:39866859-39866878 | None:intergenic | 55.0% | |
| ACCGGTGACGACGAAGATAC+CGG | + | Chr8:39865603-39865622 | None:intergenic | 55.0% | |
| ACGCTGCAGCTGTCGTGTAT+TGG | - | Chr8:39866137-39866156 | MsG0880044311.01.T01:CDS | 55.0% | |
| ACTAACGGAATCGCGGCTAG+TGG | - | Chr8:39865971-39865990 | MsG0880044311.01.T01:CDS | 55.0% | |
| AGAGGCAACCGAAGGTTTGG+GGG | - | Chr8:39866848-39866867 | MsG0880044311.01.T01:CDS | 55.0% | |
| CCAAGTGAGGCAACGAGTCA+TGG | + | Chr8:39865540-39865559 | None:intergenic | 55.0% | |
| CCATGACTCGTTGCCTCACT+TGG | - | Chr8:39865537-39865556 | MsG0880044311.01.T01:CDS | 55.0% | |
| GACTCGTTGCCTCACTTGGT+GGG | - | Chr8:39865541-39865560 | MsG0880044311.01.T01:CDS | 55.0% | |
| GAGGAGGAGGAGGATGATGT+CGG | + | Chr8:39865314-39865333 | None:intergenic | 55.0% | |
| GCCGTTGAAGTTCCTGTTGC+CGG | - | Chr8:39865719-39865738 | MsG0880044311.01.T01:CDS | 55.0% | |
| GCTCGATCCATTAGCCGTTG+TGG | - | Chr8:39865937-39865956 | MsG0880044311.01.T01:CDS | 55.0% | |
| GGGACTGCGCTATGGAATTC+TGG | - | Chr8:39866745-39866764 | MsG0880044311.01.T01:CDS | 55.0% | |
| GTTGAAGTTCCTGTTGCCGG+TGG | - | Chr8:39865722-39865741 | MsG0880044311.01.T01:CDS | 55.0% | |
| TCCGAAGAAGAGGCAACCGA+AGG | - | Chr8:39866840-39866859 | MsG0880044311.01.T01:CDS | 55.0% | |
| TCCGGTATCTTCGTCGTCAC+CGG | - | Chr8:39865599-39865618 | MsG0880044311.01.T01:CDS | 55.0% | |
| TGACCATGAACGACCGAGAC+CGG | + | Chr8:39865837-39865856 | None:intergenic | 55.0% | |
| TGACTCGTTGCCTCACTTGG+TGG | - | Chr8:39865540-39865559 | MsG0880044311.01.T01:CDS | 55.0% | |
| !! | GAAGCTCTTGTTGGTGCTGC+CGG | - | Chr8:39865815-39865834 | MsG0880044311.01.T01:CDS | 55.0% |
| !! | GTTTGCTAAGGCGGTTCGGT+AGG | + | Chr8:39865432-39865451 | None:intergenic | 55.0% |
| !!! | TCGTGGTTTTGAAGCTGCGG+CGG | + | Chr8:39865348-39865367 | None:intergenic | 55.0% |
| CTCCATCGCCAGTAGCTTCG+TGG | + | Chr8:39865365-39865384 | None:intergenic | 60.0% | |
| GAAAACGAGCCACCGGCAAC+AGG | + | Chr8:39865734-39865753 | None:intergenic | 60.0% | |
| GAAGGTTTGGGGGGTTCCGT+TGG | - | Chr8:39866858-39866877 | MsG0880044311.01.T01:CDS | 60.0% | |
| GAGGAGGAGGATGATGTCGG+TGG | + | Chr8:39865311-39865330 | None:intergenic | 60.0% | |
| GAGGCAACCGAAGGTTTGGG+GGG | - | Chr8:39866849-39866868 | MsG0880044311.01.T01:CDS | 60.0% | |
| GATGGCACCCACGGAACCAA+CGG | + | Chr8:39866877-39866896 | None:intergenic | 60.0% | |
| ! | GTGTTGCTGGGACTGCGCTA+TGG | - | Chr8:39866737-39866756 | MsG0880044311.01.T01:CDS | 60.0% |
| !! | CTTGTTGGTGCTGCCGGTCT+CGG | - | Chr8:39865821-39865840 | MsG0880044311.01.T01:CDS | 60.0% |
| !! | GGCGGTTCGGTAGGTTTCTC+CGG | + | Chr8:39865423-39865442 | None:intergenic | 60.0% |
| !! | TTCGGCGCTGTCGTTGGTTC+CGG | - | Chr8:39865581-39865600 | MsG0880044311.01.T01:CDS | 60.0% |
| !!! | TGGTTTTGAAGCTGCGGCGG+TGG | + | Chr8:39865345-39865364 | None:intergenic | 60.0% |
| !!! | TTTTGAAGCTGCGGCGGTGG+TGG | + | Chr8:39865342-39865361 | None:intergenic | 60.0% |
| CTCGCTTTCGGCGCTGTCGT+TGG | - | Chr8:39865575-39865594 | MsG0880044311.01.T01:CDS | 65.0% | |
| CTGCCGGTCTCGGTCGTTCA+TGG | - | Chr8:39865831-39865850 | MsG0880044311.01.T01:CDS | 65.0% | |
| !! | GGGGGTTCCGTTGGTTCCGT+GGG | - | Chr8:39866867-39866886 | MsG0880044311.01.T01:CDS | 65.0% |
| GGTGGTCGTGGAGGAGGAGG+AGG | + | Chr8:39865324-39865343 | None:intergenic | 70.0% | |
| ! | GACAGCGCCGAAAGCGAGCC+AGG | + | Chr8:39865573-39865592 | None:intergenic | 70.0% |
| ! | GGTGGTGGTCGTGGAGGAGG+AGG | + | Chr8:39865327-39865346 | None:intergenic | 70.0% |
| !! | GGGGGGTTCCGTTGGTTCCG+TGG | - | Chr8:39866866-39866885 | MsG0880044311.01.T01:CDS | 70.0% |
| ! | AGCTGCGGCGGTGGTGGTCG+TGG | + | Chr8:39865336-39865355 | None:intergenic | 75.0% |
| ! | GGCGGTGGTGGTCGTGGAGG+AGG | + | Chr8:39865330-39865349 | None:intergenic | 75.0% |
| ! | TGCGGCGGTGGTGGTCGTGG+AGG | + | Chr8:39865333-39865352 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 39865302 | 39867086 | 39865302 | ID=MsG0880044311.01;Name=MsG0880044311.01 |
| Chr8 | mRNA | 39865302 | 39867086 | 39865302 | ID=MsG0880044311.01.T01;Parent=MsG0880044311.01;Name=MsG0880044311.01.T01;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|594 |
| Chr8 | exon | 39865302 | 39867086 | 39865302 | ID=MsG0880044311.01.T01:exon:16901;Parent=MsG0880044311.01.T01 |
| Chr8 | CDS | 39865302 | 39867086 | 39865302 | ID=MsG0880044311.01.T01:cds;Parent=MsG0880044311.01.T01 |
| Gene Sequence |
| Protein sequence |
