Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044309.01.T01 | XP_013445471.2 | 95.946 | 592 | 21 | 2 | 1 | 592 | 1 | 589 | 0 | 1148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044309.01.T01 | Q9SHH0 | 71.303 | 568 | 163 | 0 | 19 | 586 | 20 | 587 | 0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044309.01.T01 | A0A396GJV2 | 95.946 | 592 | 21 | 2 | 1 | 592 | 1 | 589 | 0.0 | 1148 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880044307.01 | MsG0880044309.01 | 0.886909 | 2.267296e-72 | 1.650696e-68 |
| MsG0880044309.01 | MsG0880044311.01 | 0.899719 | 1.499251e-77 | 1.876209e-73 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044309.01.T01 | MTR_8g461380 | 95.777 | 592 | 22 | 2 | 1 | 592 | 1 | 589 | 0.0 | 1145 |
| MsG0880044309.01.T01 | MTR_2g035430 | 62.657 | 557 | 207 | 1 | 22 | 577 | 14 | 570 | 0.0 | 721 |
| MsG0880044309.01.T01 | MTR_8g089320 | 50.626 | 559 | 275 | 1 | 27 | 584 | 19 | 577 | 0.0 | 583 |
| MsG0880044309.01.T01 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 8 | 572 | 0.0 | 563 |
| MsG0880044309.01.T01 | MTR_8g089360 | 49.823 | 566 | 276 | 3 | 28 | 586 | 25 | 589 | 0.0 | 563 |
| MsG0880044309.01.T01 | MTR_1g030660 | 48.909 | 550 | 279 | 2 | 37 | 585 | 24 | 572 | 0.0 | 553 |
| MsG0880044309.01.T01 | MTR_6g034535 | 85.020 | 247 | 33 | 1 | 352 | 594 | 68 | 314 | 6.26e-147 | 427 |
| MsG0880044309.01.T01 | MTR_6g034535 | 67.708 | 96 | 6 | 1 | 106 | 201 | 19 | 89 | 1.10e-28 | 117 |
| MsG0880044309.01.T01 | MTR_8g089340 | 47.111 | 450 | 225 | 4 | 157 | 593 | 1 | 450 | 5.26e-135 | 402 |
| MsG0880044309.01.T01 | MTR_1g111740 | 39.506 | 567 | 325 | 4 | 37 | 588 | 7 | 570 | 2.63e-132 | 399 |
| MsG0880044309.01.T01 | MTR_4g099270 | 38.314 | 522 | 313 | 5 | 64 | 577 | 6 | 526 | 2.18e-106 | 331 |
| MsG0880044309.01.T01 | MTR_4g099270 | 41.005 | 378 | 219 | 2 | 40 | 413 | 3 | 380 | 1.62e-88 | 280 |
| MsG0880044309.01.T01 | MTR_4g099270 | 36.145 | 415 | 256 | 5 | 171 | 577 | 1 | 414 | 3.55e-77 | 252 |
| MsG0880044309.01.T01 | MTR_4g099270 | 40.132 | 304 | 178 | 2 | 40 | 339 | 3 | 306 | 6.49e-65 | 215 |
| MsG0880044309.01.T01 | MTR_7g007850 | 31.380 | 529 | 337 | 10 | 76 | 587 | 45 | 564 | 4.71e-64 | 220 |
| MsG0880044309.01.T01 | MTR_7g007850 | 29.730 | 555 | 342 | 10 | 76 | 587 | 45 | 594 | 1.66e-61 | 214 |
| MsG0880044309.01.T01 | MTR_6g027680 | 30.296 | 406 | 267 | 3 | 56 | 454 | 31 | 427 | 2.22e-61 | 213 |
| MsG0880044309.01.T01 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 8.68e-61 | 212 |
| MsG0880044309.01.T01 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 2.17e-60 | 212 |
| MsG0880044309.01.T01 | MTR_6g027660 | 31.034 | 406 | 265 | 3 | 56 | 454 | 28 | 425 | 1.81e-59 | 209 |
| MsG0880044309.01.T01 | MTR_7g086510 | 31.675 | 382 | 254 | 3 | 80 | 454 | 38 | 419 | 5.97e-59 | 208 |
| MsG0880044309.01.T01 | MTR_6g027650 | 29.730 | 407 | 270 | 4 | 55 | 454 | 20 | 417 | 2.06e-58 | 206 |
| MsG0880044309.01.T01 | MTR_7g086610 | 30.928 | 388 | 261 | 2 | 74 | 454 | 26 | 413 | 7.10e-57 | 202 |
| MsG0880044309.01.T01 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 2.20e-55 | 195 |
| MsG0880044309.01.T01 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 2.42e-55 | 196 |
| MsG0880044309.01.T01 | MTR_6g027630 | 31.454 | 337 | 224 | 3 | 125 | 454 | 3 | 339 | 9.58e-49 | 178 |
| MsG0880044309.01.T01 | MTR_8g089342 | 56.410 | 117 | 51 | 0 | 30 | 146 | 23 | 139 | 1.27e-38 | 139 |
| MsG0880044309.01.T01 | MTR_6g027670 | 33.544 | 158 | 105 | 0 | 297 | 454 | 1 | 158 | 2.25e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044309.01.T01 | AT1G17120 | 71.303 | 568 | 163 | 0 | 19 | 586 | 20 | 587 | 0.0 | 823 |
| MsG0880044309.01.T01 | AT2G34960 | 62.500 | 560 | 207 | 3 | 20 | 577 | 4 | 562 | 0.0 | 729 |
| MsG0880044309.01.T01 | AT4G21120 | 51.318 | 569 | 275 | 2 | 28 | 594 | 18 | 586 | 0.0 | 593 |
| MsG0880044309.01.T01 | AT4G21120 | 49.771 | 436 | 217 | 2 | 161 | 594 | 1 | 436 | 4.60e-148 | 435 |
| MsG0880044309.01.T01 | AT5G04770 | 39.510 | 572 | 323 | 6 | 38 | 590 | 15 | 582 | 9.04e-130 | 393 |
| MsG0880044309.01.T01 | AT3G10600 | 39.373 | 574 | 323 | 8 | 35 | 590 | 11 | 577 | 2.38e-128 | 389 |
| MsG0880044309.01.T01 | AT5G04770 | 43.490 | 384 | 207 | 2 | 38 | 411 | 15 | 398 | 4.16e-98 | 305 |
| MsG0880044309.01.T01 | AT3G10600 | 37.900 | 438 | 247 | 8 | 171 | 590 | 1 | 431 | 3.47e-89 | 283 |
| MsG0880044309.01.T01 | AT5G04770 | 37.358 | 439 | 252 | 6 | 171 | 590 | 1 | 435 | 7.99e-85 | 271 |
| MsG0880044309.01.T01 | AT1G05940 | 30.784 | 536 | 333 | 9 | 76 | 584 | 44 | 568 | 6.11e-61 | 212 |
| MsG0880044309.01.T01 | AT5G36940 | 29.730 | 407 | 279 | 3 | 55 | 454 | 4 | 410 | 5.02e-60 | 211 |
| MsG0880044309.01.T01 | AT1G58030 | 29.897 | 388 | 265 | 3 | 74 | 454 | 34 | 421 | 8.90e-58 | 205 |
| MsG0880044309.01.T01 | AT1G05940 | 31.084 | 489 | 303 | 8 | 76 | 541 | 44 | 521 | 2.02e-56 | 199 |
| MsG0880044309.01.T01 | AT1G05940 | 32.412 | 398 | 261 | 3 | 76 | 466 | 44 | 440 | 1.20e-55 | 196 |
| MsG0880044309.01.T01 | AT3G03720 | 28.536 | 403 | 279 | 4 | 60 | 454 | 4 | 405 | 1.81e-53 | 192 |
| MsG0880044309.01.T01 | AT1G05940 | 29.717 | 424 | 263 | 7 | 156 | 557 | 9 | 419 | 5.41e-44 | 163 |
Find 130 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACCTATTGGTTTAAT+TGG | 0.145764 | 8:-39834923 | MsG0880044309.01.T01:CDS |
| TTCTTTCCTTACGGTGTTAA+AGG | 0.232045 | 8:-39835037 | MsG0880044309.01.T01:CDS |
| ATTAATAGGTGTTCCAGTTT+TGG | 0.242325 | 8:+39834637 | None:intergenic |
| GGCATTGGCACTTGTGAATA+TGG | 0.273952 | 8:-39834864 | MsG0880044309.01.T01:CDS |
| GGGACTGCGCTATGGAATTC+TGG | 0.274074 | 8:-39834398 | MsG0880044309.01.T01:CDS |
| GTTGTTGGTTCTTGTGTTGC+TGG | 0.281893 | 8:-39834419 | MsG0880044309.01.T01:CDS |
| GACTTAACCTGGCTTGCTTT+TGG | 0.287921 | 8:-39835580 | MsG0880044309.01.T01:CDS |
| TTTCTTGCTTTCATTGCTGC+TGG | 0.302937 | 8:-39835364 | MsG0880044309.01.T01:CDS |
| GGTGGGGATGGTTGTGGAGG+AGG | 0.309980 | 8:+39835819 | None:intergenic |
| CCAATGATCCCATGAGAAAA+AGG | 0.312755 | 8:+39834228 | None:intergenic |
| TGCGGTGGTGGGGATGGTTG+TGG | 0.314718 | 8:+39835813 | None:intergenic |
| AACAAAACCACAACGGCTAA+TGG | 0.322847 | 8:+39835199 | None:intergenic |
| GGCTTTGAAGGTGCGGTGGT+GGG | 0.323895 | 8:+39835802 | None:intergenic |
| GCACTTATTCATCCCAAAAC+TGG | 0.324146 | 8:-39834650 | MsG0880044309.01.T01:CDS |
| TTGCTTGTGAGGAGATATTA+TGG | 0.327696 | 8:-39834497 | MsG0880044309.01.T01:CDS |
| TTGTTCAAATTGGTATGAAA+TGG | 0.328124 | 8:-39834796 | MsG0880044309.01.T01:CDS |
| GGGGATGGTTGTGGAGGAGG+AGG | 0.328468 | 8:+39835822 | None:intergenic |
| AACGGTTATTTATTGTTTGA+TGG | 0.330270 | 8:-39834885 | MsG0880044309.01.T01:CDS |
| TGACAACAAGTTTGCTTGTT+GGG | 0.330599 | 8:-39834736 | MsG0880044309.01.T01:CDS |
| GAAGAGGCAACCGAAGGTTT+GGG | 0.333568 | 8:-39834297 | MsG0880044309.01.T01:CDS |
| CTGCCGGTCTCGGTCGTTCA+TGG | 0.340474 | 8:-39835312 | MsG0880044309.01.T01:CDS |
| TTTAGGTTCTTGATTTGTAC+TGG | 0.342607 | 8:-39834191 | MsG0880044309.01.T01:CDS |
| TCTGGTTTGTTTGGTTGGAT+TGG | 0.343362 | 8:-39834380 | MsG0880044309.01.T01:CDS |
| CTTGTTGGTGCTGCCGGTCT+CGG | 0.343843 | 8:-39835322 | MsG0880044309.01.T01:CDS |
| TGTTCAAATTGGTATGAAAT+GGG | 0.344658 | 8:-39834795 | MsG0880044309.01.T01:CDS |
| CCGGTTTGGAAAGATGGTTC+TGG | 0.347078 | 8:+39835742 | None:intergenic |
| AGAAGAGGCAACCGAAGGTT+TGG | 0.353119 | 8:-39834298 | MsG0880044309.01.T01:CDS |
| TTTGGCGCTGTCGTCGGTTC+CGG | 0.359301 | 8:-39835562 | MsG0880044309.01.T01:CDS |
| CATGGGATCATTGGGTTATG+AGG | 0.363980 | 8:-39834219 | MsG0880044309.01.T01:CDS |
| ATTCTCCTTGAAGCTCTTGT+TGG | 0.364163 | 8:-39835337 | MsG0880044309.01.T01:CDS |
| GATGGTTGTGGAGGAGGAGG+AGG | 0.366628 | 8:+39835825 | None:intergenic |
| CTATGGAATTCTGGTTTGTT+TGG | 0.375852 | 8:-39834389 | MsG0880044309.01.T01:CDS |
| CACCTTCCATTATCTCTTCA+CGG | 0.376508 | 8:+39834090 | None:intergenic |
| ATCAAACCGTGAAGAGATAA+TGG | 0.377043 | 8:-39834096 | MsG0880044309.01.T01:CDS |
| TGGCTTTGAAGGTGCGGTGG+TGG | 0.379853 | 8:+39835801 | None:intergenic |
| CTGGTTTGTTTGGTTGGATT+GGG | 0.380047 | 8:-39834379 | MsG0880044309.01.T01:CDS |
| CCTTCAAGAGATATACCTAT+TGG | 0.381314 | 8:-39834932 | MsG0880044309.01.T01:CDS |
| GTCAAAAGTGTAGCATTAAT+AGG | 0.382938 | 8:+39834623 | None:intergenic |
| GGAATTCTGGTTTGTTTGGT+TGG | 0.396442 | 8:-39834385 | MsG0880044309.01.T01:CDS |
| AAGTTTGCTTGTTGGGTCAA+TGG | 0.398278 | 8:-39834729 | MsG0880044309.01.T01:CDS |
| GCCGTTGAAGTTCCCGTCGC+TGG | 0.406958 | 8:-39835424 | MsG0880044309.01.T01:CDS |
| ATACAGTTGCTGCTTGTGTT+TGG | 0.407814 | 8:-39834355 | MsG0880044309.01.T01:CDS |
| CAGTAGCTTCGTGGCTTTGA+AGG | 0.407913 | 8:+39835790 | None:intergenic |
| TCACTTGGTGGGACTTAACC+TGG | 0.412491 | 8:-39835591 | MsG0880044309.01.T01:CDS |
| ACGCTGCAGCTGTCGTGTAT+TGG | 0.414985 | 8:-39835006 | MsG0880044309.01.T01:CDS |
| TATTTATTGTTTGATGGCAT+TGG | 0.415152 | 8:-39834879 | MsG0880044309.01.T01:CDS |
| CTCCATCGCCAGTAGCTTCG+TGG | 0.417828 | 8:+39835781 | None:intergenic |
| AGTTTGCTTGTTGGGTCAAT+GGG | 0.420169 | 8:-39834728 | MsG0880044309.01.T01:CDS |
| ATTGAACCAATTAAACCAAT+AGG | 0.426832 | 8:+39834917 | None:intergenic |
| CCAATAGGTATATCTCTTGA+AGG | 0.429939 | 8:+39834932 | None:intergenic |
| TTGTTGGTTCTTGTGTTGCT+GGG | 0.430117 | 8:-39834418 | MsG0880044309.01.T01:CDS |
| TTCTTGCTTTCATTGCTGCT+GGG | 0.430448 | 8:-39835363 | MsG0880044309.01.T01:CDS |
| TTAACACCGTTCTTTCCTTA+CGG | 0.430663 | 8:-39835046 | MsG0880044309.01.T01:CDS |
| CCAGAACCATCTTTCCAAAC+CGG | 0.431612 | 8:-39835742 | MsG0880044309.01.T01:CDS |
| TGAAGGTGCGGTGGTGGGGA+TGG | 0.431688 | 8:+39835807 | None:intergenic |
| ATTCTCTCCTATGCAGCGTC+AGG | 0.432906 | 8:-39835487 | MsG0880044309.01.T01:CDS |
| ACCTTCGGTTGCCTCTTCTT+CGG | 0.433369 | 8:+39834302 | None:intergenic |
| GGTGGTGGGGATGGTTGTGG+AGG | 0.440644 | 8:+39835816 | None:intergenic |
| TGCTTGTGAGGAGATATTAT+GGG | 0.457451 | 8:-39834496 | MsG0880044309.01.T01:CDS |
| GAAGCTCTTGTTGGTGCTGC+CGG | 0.460471 | 8:-39835328 | MsG0880044309.01.T01:CDS |
| CACAATGATAAAGAACGATT+CGG | 0.464761 | 8:-39835275 | MsG0880044309.01.T01:CDS |
| CCATGACTCGTTGCCTCACT+TGG | 0.465548 | 8:-39835606 | MsG0880044309.01.T01:CDS |
| TGGTTCAATGTCTATGATAA+CGG | 0.465812 | 8:-39834903 | MsG0880044309.01.T01:CDS |
| CGCTGCATAGGAGAGAATAA+TGG | 0.467239 | 8:+39835492 | None:intergenic |
| GCTTTGAAGGTGCGGTGGTG+GGG | 0.472654 | 8:+39835803 | None:intergenic |
| TGACTCGTTGCCTCACTTGG+TGG | 0.477289 | 8:-39835603 | MsG0880044309.01.T01:CDS |
| GAGAGTCTGTTGATCGGTTG+AGG | 0.481012 | 8:+39835665 | None:intergenic |
| GTCGTGTATTGGTCTTATAC+CGG | 0.481654 | 8:-39834995 | MsG0880044309.01.T01:CDS |
| TCCGGTATCTTCGTCGTCAC+CGG | 0.482639 | 8:-39835544 | MsG0880044309.01.T01:CDS |
| ACCGGTGACGACGAAGATAC+CGG | 0.483231 | 8:+39835543 | None:intergenic |
| GACTCGTTGCCTCACTTGGT+GGG | 0.485706 | 8:-39835602 | MsG0880044309.01.T01:CDS |
| ATGACAACAAGTTTGCTTGT+TGG | 0.486739 | 8:-39834737 | MsG0880044309.01.T01:CDS |
| GCAACTTATGATGTGGATCA+TGG | 0.490232 | 8:-39834131 | MsG0880044309.01.T01:CDS |
| TATGATGTGGATCATGGAAT+TGG | 0.490780 | 8:-39834125 | MsG0880044309.01.T01:CDS |
| CTTCAAAGCCACGAAGCTAC+TGG | 0.495668 | 8:-39835789 | MsG0880044309.01.T01:CDS |
| AGTTGCAACCATATCAAAAC+CGG | 0.498318 | 8:+39834976 | None:intergenic |
| CGAATCGTTCTTTATCATTG+TGG | 0.500875 | 8:+39835276 | None:intergenic |
| CAAGAAGCTCGTTTCAATGC+TGG | 0.502149 | 8:-39835520 | MsG0880044309.01.T01:CDS |
| GTGAGTATTTGTGCTTTGAA+AGG | 0.502564 | 8:-39834761 | MsG0880044309.01.T01:CDS |
| CAGCACCAACAAGAGCTTCA+AGG | 0.507060 | 8:+39835332 | None:intergenic |
| AGAAAACGAGCCACCAGCGA+CGG | 0.513871 | 8:+39835411 | None:intergenic |
| GTTTGCTAAGGCGGTTCGAT+AGG | 0.515786 | 8:+39835714 | None:intergenic |
| GAAAACGAGCCACCAGCGAC+GGG | 0.517113 | 8:+39835412 | None:intergenic |
| ATAGTGTTAGGGCTAAACTA+TGG | 0.519584 | 8:+39834067 | None:intergenic |
| CTGTTGATCGGTTGAGGAGA+CGG | 0.523901 | 8:+39835671 | None:intergenic |
| AAAACACCTTTAACACCGTA+AGG | 0.526823 | 8:+39835031 | None:intergenic |
| GTTCAAATTGGTATGAAATG+GGG | 0.527507 | 8:-39834794 | MsG0880044309.01.T01:CDS |
| GACAGCGCCAAAAGCAAGCC+AGG | 0.528955 | 8:+39835573 | None:intergenic |
| CCAAGTGAGGCAACGAGTCA+TGG | 0.533379 | 8:+39835606 | None:intergenic |
| GCTTGATCCATTAGCCGTTG+TGG | 0.536314 | 8:-39835206 | MsG0880044309.01.T01:CDS |
| ACGTGGGCAGGTGTTTGCTA+AGG | 0.538243 | 8:+39835702 | None:intergenic |
| AGAGAAACCTGACGCTGCAT+AGG | 0.539280 | 8:+39835480 | None:intergenic |
| TGACCATGAACGACCGAGAC+CGG | 0.540172 | 8:+39835309 | None:intergenic |
| TGGCTATTGCATTGCTTGTG+AGG | 0.541304 | 8:-39834508 | MsG0880044309.01.T01:CDS |
| GTGTTGCTGGGACTGCGCTA+TGG | 0.541923 | 8:-39834406 | MsG0880044309.01.T01:CDS |
| ATTGAAACGAGCTTCTTGAC+CGG | 0.547155 | 8:+39835525 | None:intergenic |
| TGGGCAGGTGTTTGCTAAGG+CGG | 0.548053 | 8:+39835705 | None:intergenic |
| AAGAGGCAACCGAAGGTTTG+GGG | 0.551045 | 8:-39834296 | MsG0880044309.01.T01:CDS |
| TGAGTTTGCTTCCGAAGAAG+AGG | 0.551130 | 8:-39834313 | MsG0880044309.01.T01:CDS |
| GGAGGATGTCGGTGGTGTCA+TGG | 0.553029 | 8:+39835843 | None:intergenic |
| TTGGGTCAATGGGACAAGCT+AGG | 0.554068 | 8:-39834718 | MsG0880044309.01.T01:CDS |
| ACTAACGGAATCGCGGCTAG+TGG | 0.559727 | 8:-39835172 | MsG0880044309.01.T01:CDS |
| GTTGAAGTTCCCGTCGCTGG+TGG | 0.562608 | 8:-39835421 | MsG0880044309.01.T01:CDS |
| TTCGTCGCAATTGACAATGA+TGG | 0.568799 | 8:+39834251 | None:intergenic |
| CAACGGATAAGAGTGATTTG+TGG | 0.572032 | 8:-39834466 | MsG0880044309.01.T01:CDS |
| GATGGCACCCACGGAACCAA+CGG | 0.573267 | 8:+39834269 | None:intergenic |
| ATTGACAATGATGGCACCCA+CGG | 0.576091 | 8:+39834260 | None:intergenic |
| AGAGGCAACCGAAGGTTTGG+GGG | 0.576184 | 8:-39834295 | MsG0880044309.01.T01:CDS |
| AGCCACGAAGCTACTGGCGA+TGG | 0.577541 | 8:-39835783 | MsG0880044309.01.T01:CDS |
| CAATAGGTATATCTCTTGAA+GGG | 0.579389 | 8:+39834933 | None:intergenic |
| GAGGAGGAGGAGGATGTCGG+TGG | 0.585848 | 8:+39835835 | None:intergenic |
| ACCAGCGACGGGAACTTCAA+CGG | 0.587595 | 8:+39835423 | None:intergenic |
| GCTTCGTGGCTTTGAAGGTG+CGG | 0.594338 | 8:+39835795 | None:intergenic |
| AAGTATAGTGAGATTGATGC+TGG | 0.595966 | 8:-39834839 | MsG0880044309.01.T01:CDS |
| TCCGAAGAAGAGGCAACCGA+AGG | 0.598435 | 8:-39834303 | MsG0880044309.01.T01:CDS |
| GGATAAGAGTGATTTGTGGA+AGG | 0.603211 | 8:-39834462 | MsG0880044309.01.T01:CDS |
| ATATTATGGGAGGGAATCAA+CGG | 0.605663 | 8:-39834483 | MsG0880044309.01.T01:CDS |
| AACCGTGAAGAGATAATGGA+AGG | 0.615392 | 8:-39834092 | MsG0880044309.01.T01:CDS |
| GAGGCAACCGAAGGTTTGGG+GGG | 0.616110 | 8:-39834294 | MsG0880044309.01.T01:CDS |
| AGGTTAAGTCCCACCAAGTG+AGG | 0.616937 | 8:+39835593 | None:intergenic |
| TGTGAGGAGATATTATGGGA+GGG | 0.620522 | 8:-39834492 | MsG0880044309.01.T01:CDS |
| TCGTGGCTTTGAAGGTGCGG+TGG | 0.632893 | 8:+39835798 | None:intergenic |
| TTGTGAGGAGATATTATGGG+AGG | 0.634083 | 8:-39834493 | MsG0880044309.01.T01:CDS |
| GTTAATCACTAACGGAATCG+CGG | 0.635124 | 8:-39835179 | MsG0880044309.01.T01:CDS |
| GTTCATGAGAGTCTGTTGAT+CGG | 0.635369 | 8:+39835659 | None:intergenic |
| GGTACACTACTCAAATTGCA+AGG | 0.653655 | 8:-39834697 | MsG0880044309.01.T01:CDS |
| TTAACACCGTAAGGAAAGAA+CGG | 0.656749 | 8:+39835040 | None:intergenic |
| TGTTCATGCAACTTATGATG+TGG | 0.672047 | 8:-39834138 | MsG0880044309.01.T01:CDS |
| GCATAGGAGAGAATAATGGA+AGG | 0.678902 | 8:+39835496 | None:intergenic |
| AGTGATTAACAAAACCACAA+CGG | 0.729960 | 8:+39835192 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTACAACTTTTATTAT+CGG | - | Chr8:39834808-39834827 | MsG0880044309.01.T01:CDS | 15.0% |
| !!! | CTTTTGTATTATTTATTTGT+GGG | - | Chr8:39835759-39835778 | MsG0880044309.01.T01:CDS | 15.0% |
| !!! | GCTTTTGTATTATTTATTTG+TGG | - | Chr8:39835758-39835777 | MsG0880044309.01.T01:CDS | 20.0% |
| !!! | TCTTTTCATTTTTATGCTTA+TGG | - | Chr8:39835392-39835411 | MsG0880044309.01.T01:CDS | 20.0% |
| ! | AACGGTTATTTATTGTTTGA+TGG | - | Chr8:39835035-39835054 | MsG0880044309.01.T01:CDS | 25.0% |
| ! | ATTGAACCAATTAAACCAAT+AGG | + | Chr8:39835006-39835025 | None:intergenic | 25.0% |
| ! | GAAAAACATCTATCTTAACA+TGG | - | Chr8:39834776-39834795 | MsG0880044309.01.T01:CDS | 25.0% |
| ! | TGTTCAAATTGGTATGAAAT+GGG | - | Chr8:39835125-39835144 | MsG0880044309.01.T01:CDS | 25.0% |
| ! | TTGTTCAAATTGGTATGAAA+TGG | - | Chr8:39835124-39835143 | MsG0880044309.01.T01:CDS | 25.0% |
| !! | TATTTATTGTTTGATGGCAT+TGG | - | Chr8:39835041-39835060 | MsG0880044309.01.T01:CDS | 25.0% |
| !!! | AGAATCGATTCTTTTAAAAC+AGG | - | Chr8:39834682-39834701 | MsG0880044309.01.T01:CDS | 25.0% |
| !!! | ATCGGTTTTATTATTGTGAT+CGG | - | Chr8:39834826-39834845 | MsG0880044309.01.T01:CDS | 25.0% |
| !!! | GATATACCTATTGGTTTAAT+TGG | - | Chr8:39834997-39835016 | MsG0880044309.01.T01:CDS | 25.0% |
| !!! | TCTTTTCTAAGAATTGAACT+CGG | - | Chr8:39834529-39834548 | MsG0880044309.01.T01:CDS | 25.0% |
| !!! | TTGTGTTTGTTTTTTGTTGT+TGG | - | Chr8:39835486-39835505 | MsG0880044309.01.T01:CDS | 25.0% |
| AGTGATTAACAAAACCACAA+CGG | + | Chr8:39834731-39834750 | None:intergenic | 30.0% | |
| CAATAGGTATATCTCTTGAA+GGG | + | Chr8:39834990-39835009 | None:intergenic | 30.0% | |
| CACAATGATAAAGAACGATT+CGG | - | Chr8:39834645-39834664 | MsG0880044309.01.T01:CDS | 30.0% | |
| GGATGAATAAGTGCAAAAAA+GGG | + | Chr8:39835264-39835283 | None:intergenic | 30.0% | |
| GTTCAAATTGGTATGAAATG+GGG | - | Chr8:39835126-39835145 | MsG0880044309.01.T01:CDS | 30.0% | |
| TGGTTCAATGTCTATGATAA+CGG | - | Chr8:39835017-39835036 | MsG0880044309.01.T01:CDS | 30.0% | |
| ! | ATTAATAGGTGTTCCAGTTT+TGG | + | Chr8:39835286-39835305 | None:intergenic | 30.0% |
| ! | GTCAAAAGTGTAGCATTAAT+AGG | + | Chr8:39835300-39835319 | None:intergenic | 30.0% |
| ! | TGTTGCTCTTTTTACTAGTT+TGG | - | Chr8:39835338-39835357 | MsG0880044309.01.T01:CDS | 30.0% |
| ! | TTAATAGGTGTTCCAGTTTT+GGG | + | Chr8:39835285-39835304 | None:intergenic | 30.0% |
| ! | TTTTGATATGGTTGCAACTA+TGG | - | Chr8:39834948-39834967 | MsG0880044309.01.T01:CDS | 30.0% |
| !! | AGAACGATTCGGATTATTTT+CGG | - | Chr8:39834656-39834675 | MsG0880044309.01.T01:CDS | 30.0% |
| !! | ATTGTGATCGGTTTTATACA+TGG | - | Chr8:39834838-39834857 | MsG0880044309.01.T01:CDS | 30.0% |
| !! | TTTAGGTTCTTGATTTGTAC+TGG | - | Chr8:39835729-39835748 | MsG0880044309.01.T01:CDS | 30.0% |
| !!! | GTGGTTTTGTTAATCACTAA+CGG | - | Chr8:39834733-39834752 | MsG0880044309.01.T01:CDS | 30.0% |
| !!! | TCAGTTGCTTTTGTTCAAAT+TGG | - | Chr8:39835114-39835133 | MsG0880044309.01.T01:CDS | 30.0% |
| AAAACACCTTTAACACCGTA+AGG | + | Chr8:39834892-39834911 | None:intergenic | 35.0% | |
| AAGTATAGTGAGATTGATGC+TGG | - | Chr8:39835081-39835100 | MsG0880044309.01.T01:CDS | 35.0% | |
| AGTTGCAACCATATCAAAAC+CGG | + | Chr8:39834947-39834966 | None:intergenic | 35.0% | |
| ATATTATGGGAGGGAATCAA+CGG | - | Chr8:39835437-39835456 | MsG0880044309.01.T01:CDS | 35.0% | |
| ATCAAACCGTGAAGAGATAA+TGG | - | Chr8:39835824-39835843 | MsG0880044309.01.T01:CDS | 35.0% | |
| CCAATAGGTATATCTCTTGA+AGG | + | Chr8:39834991-39835010 | None:intergenic | 35.0% | |
| CCTTCAAGAGATATACCTAT+TGG | - | Chr8:39834988-39835007 | MsG0880044309.01.T01:CDS | 35.0% | |
| CGAATCGTTCTTTATCATTG+TGG | + | Chr8:39834647-39834666 | None:intergenic | 35.0% | |
| GGGATGAATAAGTGCAAAAA+AGG | + | Chr8:39835265-39835284 | None:intergenic | 35.0% | |
| TATGATGTGGATCATGGAAT+TGG | - | Chr8:39835795-39835814 | MsG0880044309.01.T01:CDS | 35.0% | |
| TGAATAAGTGCAAAAAAGGG+TGG | + | Chr8:39835261-39835280 | None:intergenic | 35.0% | |
| TGCTTGTGAGGAGATATTAT+GGG | - | Chr8:39835424-39835443 | MsG0880044309.01.T01:CDS | 35.0% | |
| TGTTCATGCAACTTATGATG+TGG | - | Chr8:39835782-39835801 | MsG0880044309.01.T01:CDS | 35.0% | |
| TTAACACCGTAAGGAAAGAA+CGG | + | Chr8:39834883-39834902 | None:intergenic | 35.0% | |
| TTAACACCGTTCTTTCCTTA+CGG | - | Chr8:39834874-39834893 | MsG0880044309.01.T01:CDS | 35.0% | |
| TTGCTTGTGAGGAGATATTA+TGG | - | Chr8:39835423-39835442 | MsG0880044309.01.T01:CDS | 35.0% | |
| ! | ATGACAACAAGTTTGCTTGT+TGG | - | Chr8:39835183-39835202 | MsG0880044309.01.T01:CDS | 35.0% |
| ! | CTTTTTCTCATGGGATCATT+GGG | - | Chr8:39835693-39835712 | MsG0880044309.01.T01:CDS | 35.0% |
| ! | GTGAGTATTTGTGCTTTGAA+AGG | - | Chr8:39835159-39835178 | MsG0880044309.01.T01:CDS | 35.0% |
| ! | TGACAACAAGTTTGCTTGTT+GGG | - | Chr8:39835184-39835203 | MsG0880044309.01.T01:CDS | 35.0% |
| ! | TTCTTTCCTTACGGTGTTAA+AGG | - | Chr8:39834883-39834902 | MsG0880044309.01.T01:CDS | 35.0% |
| !! | CTATGGAATTCTGGTTTGTT+TGG | - | Chr8:39835531-39835550 | MsG0880044309.01.T01:CDS | 35.0% |
| !!! | ATGGTATTTTCACTGGCTTT+GGG | + | Chr8:39834298-39834317 | None:intergenic | 35.0% |
| !!! | GTCTTATACCGGTTTTGATA+TGG | - | Chr8:39834936-39834955 | MsG0880044309.01.T01:CDS | 35.0% |
| !!! | TGGGTTATGAGGCTTTTTTT+AGG | - | Chr8:39835712-39835731 | MsG0880044309.01.T01:CDS | 35.0% |
| AACAAAACCACAACGGCTAA+TGG | + | Chr8:39834724-39834743 | None:intergenic | 40.0% | |
| ATTCTCCTTGAAGCTCTTGT+TGG | - | Chr8:39834583-39834602 | MsG0880044309.01.T01:CDS | 40.0% | |
| ATTGAAACGAGCTTCTTGAC+CGG | + | Chr8:39834398-39834417 | None:intergenic | 40.0% | |
| CAACGGATAAGAGTGATTTG+TGG | - | Chr8:39835454-39835473 | MsG0880044309.01.T01:CDS | 40.0% | |
| CACCTTCCATTATCTCTTCA+CGG | + | Chr8:39835833-39835852 | None:intergenic | 40.0% | |
| CCAATGATCCCATGAGAAAA+AGG | + | Chr8:39835695-39835714 | None:intergenic | 40.0% | |
| GCAACTTATGATGTGGATCA+TGG | - | Chr8:39835789-39835808 | MsG0880044309.01.T01:CDS | 40.0% | |
| GCACTTATTCATCCCAAAAC+TGG | - | Chr8:39835270-39835289 | MsG0880044309.01.T01:CDS | 40.0% | |
| GGTACACTACTCAAATTGCA+AGG | - | Chr8:39835223-39835242 | MsG0880044309.01.T01:CDS | 40.0% | |
| GTTAATCACTAACGGAATCG+CGG | - | Chr8:39834741-39834760 | MsG0880044309.01.T01:CDS | 40.0% | |
| GTTCATGAGAGTCTGTTGAT+CGG | + | Chr8:39834264-39834283 | None:intergenic | 40.0% | |
| TGTGAGGAGATATTATGGGA+GGG | - | Chr8:39835428-39835447 | MsG0880044309.01.T01:CDS | 40.0% | |
| TTCGTCGCAATTGACAATGA+TGG | + | Chr8:39835672-39835691 | None:intergenic | 40.0% | |
| TTCTTGCTTTCATTGCTGCT+GGG | - | Chr8:39834557-39834576 | MsG0880044309.01.T01:CDS | 40.0% | |
| TTGTGAGGAGATATTATGGG+AGG | - | Chr8:39835427-39835446 | MsG0880044309.01.T01:CDS | 40.0% | |
| TTTCTTGCTTTCATTGCTGC+TGG | - | Chr8:39834556-39834575 | MsG0880044309.01.T01:CDS | 40.0% | |
| ! | AAGTTTGCTTGTTGGGTCAA+TGG | - | Chr8:39835191-39835210 | MsG0880044309.01.T01:CDS | 40.0% |
| ! | ACGAGTCATGGTATTTTCAC+TGG | + | Chr8:39834305-39834324 | None:intergenic | 40.0% |
| ! | AGTTTGCTTGTTGGGTCAAT+GGG | - | Chr8:39835192-39835211 | MsG0880044309.01.T01:CDS | 40.0% |
| ! | ATACAGTTGCTGCTTGTGTT+TGG | - | Chr8:39835565-39835584 | MsG0880044309.01.T01:CDS | 40.0% |
| ! | CCTTTTTCTCATGGGATCAT+TGG | - | Chr8:39835692-39835711 | MsG0880044309.01.T01:CDS | 40.0% |
| ! | GCATAGGAGAGAATAATGGA+AGG | + | Chr8:39834427-39834446 | None:intergenic | 40.0% |
| ! | GGATAAGAGTGATTTGTGGA+AGG | - | Chr8:39835458-39835477 | MsG0880044309.01.T01:CDS | 40.0% |
| ! | TTCGATAGGTTTTTCCGGTT+TGG | + | Chr8:39834195-39834214 | None:intergenic | 40.0% |
| !! | AACCGTGAAGAGATAATGGA+AGG | - | Chr8:39835828-39835847 | MsG0880044309.01.T01:CDS | 40.0% |
| !! | CTGGTTTGTTTGGTTGGATT+GGG | - | Chr8:39835541-39835560 | MsG0880044309.01.T01:CDS | 40.0% |
| !! | GGAATTCTGGTTTGTTTGGT+TGG | - | Chr8:39835535-39835554 | MsG0880044309.01.T01:CDS | 40.0% |
| !! | GTCGTGTATTGGTCTTATAC+CGG | - | Chr8:39834925-39834944 | MsG0880044309.01.T01:CDS | 40.0% |
| !! | TCTGGTTTGTTTGGTTGGAT+TGG | - | Chr8:39835540-39835559 | MsG0880044309.01.T01:CDS | 40.0% |
| !! | TTGTTGGTTCTTGTGTTGCT+GGG | - | Chr8:39835502-39835521 | MsG0880044309.01.T01:CDS | 40.0% |
| !!! | CATGGTATTTTCACTGGCTT+TGG | + | Chr8:39834299-39834318 | None:intergenic | 40.0% |
| !!! | GTTTTTCCGGTTTGGAAAGA+TGG | + | Chr8:39834187-39834206 | None:intergenic | 40.0% |
| !!! | TATTTTCACTGGCTTTGGGA+AGG | + | Chr8:39834294-39834313 | None:intergenic | 40.0% |
| !!! | TGCTGCTTGTGTTTGGTTTT+TGG | - | Chr8:39835572-39835591 | MsG0880044309.01.T01:CDS | 40.0% |
| ATTGACAATGATGGCACCCA+CGG | + | Chr8:39835663-39835682 | None:intergenic | 45.0% | |
| CAAGAAGCTCGTTTCAATGC+TGG | - | Chr8:39834400-39834419 | MsG0880044309.01.T01:CDS | 45.0% | |
| CATGGGATCATTGGGTTATG+AGG | - | Chr8:39835701-39835720 | MsG0880044309.01.T01:CDS | 45.0% | |
| CCAGAACCATCTTTCCAAAC+CGG | - | Chr8:39834178-39834197 | MsG0880044309.01.T01:CDS | 45.0% | |
| CGCTGCATAGGAGAGAATAA+TGG | + | Chr8:39834431-39834450 | None:intergenic | 45.0% | |
| TGGCTATTGCATTGCTTGTG+AGG | - | Chr8:39835412-39835431 | MsG0880044309.01.T01:CDS | 45.0% | |
| ! | GCGACGAACCTTTTTCTCAT+GGG | - | Chr8:39835684-39835703 | MsG0880044309.01.T01:CDS | 45.0% |
| ! | TGAGTTTGCTTCCGAAGAAG+AGG | - | Chr8:39835607-39835626 | MsG0880044309.01.T01:CDS | 45.0% |
| ! | TGCGACGAACCTTTTTCTCA+TGG | - | Chr8:39835683-39835702 | MsG0880044309.01.T01:CDS | 45.0% |
| !! | GGCATTGGCACTTGTGAATA+TGG | - | Chr8:39835056-39835075 | MsG0880044309.01.T01:CDS | 45.0% |
| !! | GTTGTTGGTTCTTGTGTTGC+TGG | - | Chr8:39835501-39835520 | MsG0880044309.01.T01:CDS | 45.0% |
| !!! | GACTTAACCTGGCTTGCTTT+TGG | - | Chr8:39834340-39834359 | MsG0880044309.01.T01:CDS | 45.0% |
| AAGAGGCAACCGAAGGTTTG+GGG | - | Chr8:39835624-39835643 | MsG0880044309.01.T01:CDS | 50.0% | |
| ACCTTCGGTTGCCTCTTCTT+CGG | + | Chr8:39835621-39835640 | None:intergenic | 50.0% | |
| AGAAGAGGCAACCGAAGGTT+TGG | - | Chr8:39835622-39835641 | MsG0880044309.01.T01:CDS | 50.0% | |
| AGAGAAACCTGACGCTGCAT+AGG | + | Chr8:39834443-39834462 | None:intergenic | 50.0% | |
| AGGTTAAGTCCCACCAAGTG+AGG | + | Chr8:39834330-39834349 | None:intergenic | 50.0% | |
| ATTCTCTCCTATGCAGCGTC+AGG | - | Chr8:39834433-39834452 | MsG0880044309.01.T01:CDS | 50.0% | |
| CAGCACCAACAAGAGCTTCA+AGG | + | Chr8:39834591-39834610 | None:intergenic | 50.0% | |
| CTGTTGATCGGTTGAGGAGA+CGG | + | Chr8:39834252-39834271 | None:intergenic | 50.0% | |
| CTTCAAAGCCACGAAGCTAC+TGG | - | Chr8:39834131-39834150 | MsG0880044309.01.T01:CDS | 50.0% | |
| GAAGAGGCAACCGAAGGTTT+GGG | - | Chr8:39835623-39835642 | MsG0880044309.01.T01:CDS | 50.0% | |
| GAGAGTCTGTTGATCGGTTG+AGG | + | Chr8:39834258-39834277 | None:intergenic | 50.0% | |
| GCTTGATCCATTAGCCGTTG+TGG | - | Chr8:39834714-39834733 | MsG0880044309.01.T01:CDS | 50.0% | |
| TTGGGTCAATGGGACAAGCT+AGG | - | Chr8:39835202-39835221 | MsG0880044309.01.T01:CDS | 50.0% | |
| ! | AGGAGACGGTCTTTTAGACG+TGG | + | Chr8:39834238-39834257 | None:intergenic | 50.0% |
| ! | GGAGACGGTCTTTTAGACGT+GGG | + | Chr8:39834237-39834256 | None:intergenic | 50.0% |
| ! | GGCGGTTCGATAGGTTTTTC+CGG | + | Chr8:39834200-39834219 | None:intergenic | 50.0% |
| ! | GTTTGCTAAGGCGGTTCGAT+AGG | + | Chr8:39834209-39834228 | None:intergenic | 50.0% |
| ! | TCACTTGGTGGGACTTAACC+TGG | - | Chr8:39834329-39834348 | MsG0880044309.01.T01:CDS | 50.0% |
| !! | CAGTAGCTTCGTGGCTTTGA+AGG | + | Chr8:39834133-39834152 | None:intergenic | 50.0% |
| !! | CCGGTTTGGAAAGATGGTTC+TGG | + | Chr8:39834181-39834200 | None:intergenic | 50.0% |
| AACGGAACCCCCCAAACCTT+CGG | + | Chr8:39835636-39835655 | None:intergenic | 55.0% | |
| ACCAGCGACGGGAACTTCAA+CGG | + | Chr8:39834500-39834519 | None:intergenic | 55.0% | |
| ACCGGTGACGACGAAGATAC+CGG | + | Chr8:39834380-39834399 | None:intergenic | 55.0% | |
| ACGCTGCAGCTGTCGTGTAT+TGG | - | Chr8:39834914-39834933 | MsG0880044309.01.T01:CDS | 55.0% | |
| ACTAACGGAATCGCGGCTAG+TGG | - | Chr8:39834748-39834767 | MsG0880044309.01.T01:CDS | 55.0% | |
| AGAAAACGAGCCACCAGCGA+CGG | + | Chr8:39834512-39834531 | None:intergenic | 55.0% | |
| AGAGGCAACCGAAGGTTTGG+GGG | - | Chr8:39835625-39835644 | MsG0880044309.01.T01:CDS | 55.0% | |
| CCAAGTGAGGCAACGAGTCA+TGG | + | Chr8:39834317-39834336 | None:intergenic | 55.0% | |
| CCATGACTCGTTGCCTCACT+TGG | - | Chr8:39834314-39834333 | MsG0880044309.01.T01:CDS | 55.0% | |
| GACTCGTTGCCTCACTTGGT+GGG | - | Chr8:39834318-39834337 | MsG0880044309.01.T01:CDS | 55.0% | |
| GGGACTGCGCTATGGAATTC+TGG | - | Chr8:39835522-39835541 | MsG0880044309.01.T01:CDS | 55.0% | |
| TCCGAAGAAGAGGCAACCGA+AGG | - | Chr8:39835617-39835636 | MsG0880044309.01.T01:CDS | 55.0% | |
| TCCGGTATCTTCGTCGTCAC+CGG | - | Chr8:39834376-39834395 | MsG0880044309.01.T01:CDS | 55.0% | |
| TGACCATGAACGACCGAGAC+CGG | + | Chr8:39834614-39834633 | None:intergenic | 55.0% | |
| TGACTCGTTGCCTCACTTGG+TGG | - | Chr8:39834317-39834336 | MsG0880044309.01.T01:CDS | 55.0% | |
| ! | ACGGTCTTTTAGACGTGGGC+AGG | + | Chr8:39834233-39834252 | None:intergenic | 55.0% |
| ! | ACGTGGGCAGGTGTTTGCTA+AGG | + | Chr8:39834221-39834240 | None:intergenic | 55.0% |
| ! | TGGGCAGGTGTTTGCTAAGG+CGG | + | Chr8:39834218-39834237 | None:intergenic | 55.0% |
| !! | CTTGCTTTTGGCGCTGTCGT+CGG | - | Chr8:39834352-39834371 | MsG0880044309.01.T01:CDS | 55.0% |
| !! | GAAGCTCTTGTTGGTGCTGC+CGG | - | Chr8:39834592-39834611 | MsG0880044309.01.T01:CDS | 55.0% |
| !! | GCTTCGTGGCTTTGAAGGTG+CGG | + | Chr8:39834128-39834147 | None:intergenic | 55.0% |
| AGCCACGAAGCTACTGGCGA+TGG | - | Chr8:39834137-39834156 | MsG0880044309.01.T01:CDS | 60.0% | |
| CTCCATCGCCAGTAGCTTCG+TGG | + | Chr8:39834142-39834161 | None:intergenic | 60.0% | |
| GAAAACGAGCCACCAGCGAC+GGG | + | Chr8:39834511-39834530 | None:intergenic | 60.0% | |
| GAAGGTTTGGGGGGTTCCGT+TGG | - | Chr8:39835635-39835654 | MsG0880044309.01.T01:CDS | 60.0% | |
| GACAGCGCCAAAAGCAAGCC+AGG | + | Chr8:39834350-39834369 | None:intergenic | 60.0% | |
| GAGGCAACCGAAGGTTTGGG+GGG | - | Chr8:39835626-39835645 | MsG0880044309.01.T01:CDS | 60.0% | |
| GATGGCACCCACGGAACCAA+CGG | + | Chr8:39835654-39835673 | None:intergenic | 60.0% | |
| GATGGTTGTGGAGGAGGAGG+AGG | + | Chr8:39834098-39834117 | None:intergenic | 60.0% | |
| GTGGAGGAGGAGGAGGATGT+CGG | + | Chr8:39834091-39834110 | None:intergenic | 60.0% | |
| GTTGAAGTTCCCGTCGCTGG+TGG | - | Chr8:39834499-39834518 | MsG0880044309.01.T01:CDS | 60.0% | |
| ! | GTGTTGCTGGGACTGCGCTA+TGG | - | Chr8:39835514-39835533 | MsG0880044309.01.T01:CDS | 60.0% |
| !! | CTTGTTGGTGCTGCCGGTCT+CGG | - | Chr8:39834598-39834617 | MsG0880044309.01.T01:CDS | 60.0% |
| !! | GCTTTGAAGGTGCGGTGGTG+GGG | + | Chr8:39834120-39834139 | None:intergenic | 60.0% |
| !! | GGCTTTGAAGGTGCGGTGGT+GGG | + | Chr8:39834121-39834140 | None:intergenic | 60.0% |
| !! | TCGTGGCTTTGAAGGTGCGG+TGG | + | Chr8:39834125-39834144 | None:intergenic | 60.0% |
| !! | TGGCTTTGAAGGTGCGGTGG+TGG | + | Chr8:39834122-39834141 | None:intergenic | 60.0% |
| !! | TTTGGCGCTGTCGTCGGTTC+CGG | - | Chr8:39834358-39834377 | MsG0880044309.01.T01:CDS | 60.0% |
| CTGCCGGTCTCGGTCGTTCA+TGG | - | Chr8:39834608-39834627 | MsG0880044309.01.T01:CDS | 65.0% | |
| GAGGAGGAGGAGGATGTCGG+TGG | + | Chr8:39834088-39834107 | None:intergenic | 65.0% | |
| GCCGTTGAAGTTCCCGTCGC+TGG | - | Chr8:39834496-39834515 | MsG0880044309.01.T01:CDS | 65.0% | |
| GGGGATGGTTGTGGAGGAGG+AGG | + | Chr8:39834101-39834120 | None:intergenic | 65.0% | |
| GGTGGGGATGGTTGTGGAGG+AGG | + | Chr8:39834104-39834123 | None:intergenic | 65.0% | |
| !! | GGGGGTTCCGTTGGTTCCGT+GGG | - | Chr8:39835644-39835663 | MsG0880044309.01.T01:CDS | 65.0% |
| !! | GGTGGTGGGGATGGTTGTGG+AGG | + | Chr8:39834107-39834126 | None:intergenic | 65.0% |
| !! | TGAAGGTGCGGTGGTGGGGA+TGG | + | Chr8:39834116-39834135 | None:intergenic | 65.0% |
| !! | TGCGGTGGTGGGGATGGTTG+TGG | + | Chr8:39834110-39834129 | None:intergenic | 65.0% |
| !! | GGGGGGTTCCGTTGGTTCCG+TGG | - | Chr8:39835643-39835662 | MsG0880044309.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 39834079 | 39835863 | 39834079 | ID=MsG0880044309.01;Name=MsG0880044309.01 |
| Chr8 | mRNA | 39834079 | 39835863 | 39834079 | ID=MsG0880044309.01.T01;Parent=MsG0880044309.01;Name=MsG0880044309.01.T01;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|594 |
| Chr8 | exon | 39834079 | 39835863 | 39834079 | ID=MsG0880044309.01.T01:exon:16894;Parent=MsG0880044309.01.T01 |
| Chr8 | CDS | 39834079 | 39835863 | 39834079 | ID=MsG0880044309.01.T01:cds;Parent=MsG0880044309.01.T01 |
| Gene Sequence |
| Protein sequence |
