Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139550 | XP_003604167.1 | 95.873 | 315 | 13 | 0 | 1 | 315 | 1 | 315 | 0.0 | 631 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139550 | sp|Q9LU39|GLUBP_ARATH | 54.829 | 321 | 121 | 8 | 1 | 313 | 1 | 305 | 4.17e-118 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139550 | G7JVM7 | 95.873 | 315 | 13 | 0 | 1 | 315 | 1 | 315 | 0.0 | 631 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028620 | Msa0139550 | -0.805090 | 1.578631e-49 | -8.615850e-47 |
| Msa0032080 | Msa0139550 | -0.819812 | 9.541202e-53 | -8.615850e-47 |
| Msa0032470 | Msa0139550 | -0.816223 | 6.178980e-52 | -8.615850e-47 |
| Msa0076290 | Msa0139550 | -0.809583 | 1.761525e-50 | -8.615850e-47 |
| Msa0090510 | Msa0139550 | -0.804301 | 2.307420e-49 | -8.615850e-47 |
| Msa0090550 | Msa0139550 | -0.808157 | 3.555138e-50 | -8.615850e-47 |
| Msa0108140 | Msa0139550 | -0.830093 | 3.566105e-55 | -8.615850e-47 |
| Msa0115790 | Msa0139550 | -0.843957 | 1.017738e-58 | -8.615850e-47 |
| Msa0139550 | Msa0144530 | -0.802408 | 5.690196e-49 | -8.615850e-47 |
| Msa0139550 | Msa0148080 | -0.800416 | 1.455898e-48 | -8.615850e-47 |
| Msa0139550 | Msa0150230 | -0.805856 | 1.090705e-49 | -8.615850e-47 |
| Msa0139550 | Msa0160960 | -0.817051 | 4.030344e-52 | -8.615850e-47 |
| Msa0139550 | Msa0189030 | -0.802073 | 6.670989e-49 | -8.615850e-47 |
| Msa0139550 | Msa0207040 | 0.803168 | 3.965812e-49 | -8.615850e-47 |
| Msa0139550 | Msa0218370 | -0.810443 | 1.149840e-50 | -8.615850e-47 |
| Msa0139550 | Msa0219590 | -0.803916 | 2.773595e-49 | -8.615850e-47 |
| Msa0139550 | Msa0220400 | 0.815282 | 1.001458e-51 | -8.615850e-47 |
| Msa0139550 | Msa0234410 | 0.815179 | 1.055244e-51 | -8.615850e-47 |
| Msa0139550 | Msa0241140 | -0.817369 | 3.418280e-52 | -8.615850e-47 |
| Msa0139550 | Msa0309270 | -0.807987 | 3.864875e-50 | -8.615850e-47 |
| Msa0139550 | Msa0318680 | -0.831690 | 1.446953e-55 | -8.615850e-47 |
| Msa0139550 | Msa0374220 | -0.800768 | 1.234486e-48 | -8.615850e-47 |
| Msa0139550 | Msa0374340 | 0.848482 | 5.958535e-60 | -8.615850e-47 |
| Msa0139550 | Msa0374420 | 0.837477 | 5.079142e-57 | -8.615850e-47 |
| Msa0139550 | Msa0377290 | -0.818592 | 1.809104e-52 | -8.615850e-47 |
| Msa0139550 | Msa0388080 | 0.802173 | 6.360139e-49 | -8.615850e-47 |
| Msa0139550 | Msa0395750 | -0.834645 | 2.659495e-56 | -8.615850e-47 |
| Msa0139550 | Msa0403470 | 0.842229 | 2.937364e-58 | -8.615850e-47 |
| Msa0139550 | Msa0434540 | -0.805643 | 1.208961e-49 | -8.615850e-47 |
| Msa0139550 | Msa0470880 | -0.800670 | 1.292619e-48 | -8.615850e-47 |
| Msa0139550 | Msa0527540 | -0.854485 | 1.193051e-61 | -8.615850e-47 |
| Msa0139550 | Msa0529780 | 0.950809 | 7.624169e-109 | -8.615850e-47 |
| Msa0139550 | Msa0542560 | -0.824211 | 9.125443e-54 | -8.615850e-47 |
| Msa0139550 | Msa0545050 | -0.814439 | 1.539535e-51 | -8.615850e-47 |
| Msa0139550 | Msa0548650 | 0.802866 | 4.577907e-49 | -8.615850e-47 |
| Msa0139550 | Msa0566120 | 0.859151 | 5.042666e-63 | -8.615850e-47 |
| Msa0139550 | Msa0566350 | -0.812192 | 4.796892e-51 | -8.615850e-47 |
| Msa0139550 | Msa0566750 | -0.803885 | 2.815696e-49 | -8.615850e-47 |
| Msa0139550 | Msa0589260 | 0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa0139550 | Msa0604290 | -0.834766 | 2.479629e-56 | -8.615850e-47 |
| Msa0139550 | Msa0613110 | -0.820744 | 5.834287e-53 | -8.615850e-47 |
| Msa0139550 | Msa0613420 | -0.808035 | 3.774928e-50 | -8.615850e-47 |
| Msa0139550 | Msa0623990 | -0.840272 | 9.609386e-58 | -8.615850e-47 |
| Msa0139550 | Msa0624060 | -0.834716 | 2.551201e-56 | -8.615850e-47 |
| Msa0139550 | Msa0637930 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
| Msa0139550 | Msa0657930 | 0.857829 | 1.250324e-62 | -8.615850e-47 |
| Msa0139550 | Msa0662540 | -0.805535 | 1.273914e-49 | -8.615850e-47 |
| Msa0139550 | Msa0665530 | 0.801663 | 8.095753e-49 | -8.615850e-47 |
| Msa0139550 | Msa0676130 | -0.837894 | 3.970109e-57 | -8.615850e-47 |
| Msa0139550 | Msa0676180 | -0.835762 | 1.389505e-56 | -8.615850e-47 |
| Msa0139550 | Msa0677530 | -0.812177 | 4.834357e-51 | -8.615850e-47 |
| Msa0139550 | Msa0685090 | -0.804018 | 2.641415e-49 | -8.615850e-47 |
| Msa0139550 | Msa0696540 | -0.808537 | 2.949486e-50 | -8.615850e-47 |
| Msa0139550 | Msa0703810 | -0.826723 | 2.319694e-54 | -8.615850e-47 |
| Msa0139550 | Msa0878220 | -0.835045 | 2.108315e-56 | -8.615850e-47 |
| Msa0139550 | Msa0910620 | -0.813830 | 2.098621e-51 | -8.615850e-47 |
| Msa0139550 | Msa0943970 | -0.848547 | 5.718359e-60 | -8.615850e-47 |
| Msa0139550 | Msa0944020 | -0.852968 | 3.257300e-61 | -8.615850e-47 |
| Msa0139550 | Msa0965290 | -0.801895 | 7.255821e-49 | -8.615850e-47 |
| Msa0139550 | Msa0968470 | 0.815900 | 7.293276e-52 | -8.615850e-47 |
| Msa0139550 | Msa0985180 | -0.828121 | 1.072221e-54 | -8.615850e-47 |
| Msa0139550 | Msa0992510 | -0.813588 | 2.372631e-51 | -8.615850e-47 |
| Msa0139550 | Msa1029060 | 0.805940 | 1.047053e-49 | -8.615850e-47 |
| Msa0139550 | Msa1080330 | 0.818781 | 1.639035e-52 | -8.615850e-47 |
| Msa0139550 | Msa1081790 | 0.807900 | 4.032213e-50 | -8.615850e-47 |
| Msa0139550 | Msa1100130 | 0.824158 | 9.390290e-54 | -8.615850e-47 |
| Msa0139550 | Msa1122150 | -0.830670 | 2.577137e-55 | -8.615850e-47 |
| Msa0139550 | Msa1124530 | 0.803387 | 3.571103e-49 | -8.615850e-47 |
| Msa0139550 | Msa1156150 | 0.818037 | 2.415149e-52 | -8.615850e-47 |
| Msa0139550 | Msa1160560 | -0.815330 | 9.772227e-52 | -8.615850e-47 |
| Msa0139550 | Msa1190100 | 0.818531 | 1.867124e-52 | -8.615850e-47 |
| Msa0139550 | Msa1196610 | 0.806545 | 7.809647e-50 | -8.615850e-47 |
| Msa0139550 | Msa1208450 | 0.806981 | 6.317763e-50 | -8.615850e-47 |
| Msa0139550 | Msa1240970 | -0.808151 | 3.566135e-50 | -8.615850e-47 |
| Msa0139550 | Msa1246360 | -0.804984 | 1.661151e-49 | -8.615850e-47 |
| Msa0139550 | Msa1258030 | 0.820332 | 7.253295e-53 | -8.615850e-47 |
| Msa0139550 | Msa1271130 | -0.810430 | 1.157062e-50 | -8.615850e-47 |
| Msa0139550 | Msa1277670 | -0.801979 | 6.971865e-49 | -8.615850e-47 |
| Msa0139550 | Msa1298390 | 0.810619 | 1.053290e-50 | -8.615850e-47 |
| Msa0139550 | Msa1325410 | 0.820252 | 7.568533e-53 | -8.615850e-47 |
| Msa0139550 | Msa1329200 | -0.849083 | 4.060024e-60 | -8.615850e-47 |
| Msa0139550 | Msa1341060 | -0.800006 | 1.764671e-48 | -8.615850e-47 |
| Msa0139550 | Msa1346840 | -0.843276 | 1.548151e-58 | -8.615850e-47 |
| Msa0139550 | Msa1357560 | -0.802569 | 5.272427e-49 | -8.615850e-47 |
| Msa0139550 | Msa1364350 | 0.824844 | 6.477718e-54 | -8.615850e-47 |
| Msa0139550 | Msa1369920 | 0.835616 | 1.513045e-56 | -8.615850e-47 |
| Msa0139550 | Msa1378410 | -0.836982 | 6.798699e-57 | -8.615850e-47 |
| Msa0139550 | Msa1392210 | -0.811932 | 5.467569e-51 | -8.615850e-47 |
| Msa0139550 | Msa1401990 | -0.824073 | 9.835284e-54 | -8.615850e-47 |
| Msa0139550 | Msa1407760 | -0.851006 | 1.174931e-60 | -8.615850e-47 |
| Msa0139550 | Msa1419840 | -0.806939 | 6.446953e-50 | -8.615850e-47 |
| Msa0139550 | Msa1437730 | -0.850540 | 1.589224e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139550 | MtrunA17_Chr4g0000861 | 95.873 | 315 | 13 | 0 | 1 | 315 | 1 | 315 | 0.0 | 631 |
| Msa0139550 | MtrunA17_Chr3g0077841 | 83.721 | 43 | 7 | 0 | 223 | 265 | 1 | 43 | 1.05e-19 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0139550 | AT3G21200.1 | 54.829 | 321 | 121 | 8 | 1 | 313 | 1 | 305 | 4.24e-119 | 345 |
| Msa0139550 | AT3G03890.1 | 28.295 | 258 | 153 | 12 | 53 | 292 | 75 | 318 | 8.22e-13 | 68.6 |
| Msa0139550 | AT3G03890.2 | 28.163 | 245 | 144 | 12 | 53 | 279 | 75 | 305 | 8.20e-12 | 65.5 |
Find 90 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGTTTCAAGAACAATTA+TGG | 0.206636 | 1_3:-73232415 | Msa0139550:CDS |
| CCTTGCATATTTGATGAAAT+TGG | 0.214626 | 1_3:+73229959 | None:intergenic |
| TAGGGTTCATATAGTATTTC+AGG | 0.218025 | 1_3:+73229726 | None:intergenic |
| AGTAATGTCTTCCATATTAT+TGG | 0.225630 | 1_3:+73230565 | None:intergenic |
| CGATTGTTGATTGTTCTAAT+TGG | 0.226764 | 1_3:+73232466 | None:intergenic |
| TGAAGGGTGTGTTGAGATTT+TGG | 0.236408 | 1_3:+73232536 | None:intergenic |
| CTATGTTGATTTGGATTTCC+AGG | 0.294434 | 1_3:-73230528 | Msa0139550:intron |
| TGTTGAAATGAAAGGGAAAA+TGG | 0.302674 | 1_3:+73232700 | None:intergenic |
| TCACAGAAGCAAAGATGATA+TGG | 0.313832 | 1_3:-73230224 | Msa0139550:CDS |
| TGTATATTATTGCTGTAGAT+AGG | 0.315510 | 1_3:-73230849 | Msa0139550:CDS |
| GCTGCACTTGGATGACTTCC+AGG | 0.317388 | 1_3:-73230824 | Msa0139550:CDS |
| TGAAATTAACACCAATAATA+TGG | 0.323447 | 1_3:-73230576 | Msa0139550:CDS |
| CAAGAATATGACCATTGTTA+TGG | 0.328686 | 1_3:-73229918 | Msa0139550:three_prime_UTR |
| TTCGTTATTGATTCTGAAGA+TGG | 0.354749 | 1_3:-73232324 | Msa0139550:CDS |
| TTGTAATGTCTATGTTGATT+TGG | 0.370501 | 1_3:-73230537 | Msa0139550:CDS |
| CACAGCGGCTTGTTTCTTTG+TGG | 0.379289 | 1_3:-73230909 | Msa0139550:intron |
| ACTTTCAACGTTAACCCAAC+AGG | 0.382511 | 1_3:-73232373 | Msa0139550:CDS |
| ATTTAACTGTATGTCACAAT+TGG | 0.386834 | 1_3:-73230091 | Msa0139550:CDS |
| AGAGAAGTCACAGATGAAAA+AGG | 0.391076 | 1_3:-73230126 | Msa0139550:CDS |
| GATGATATGGGTAGACCGTT+TGG | 0.393043 | 1_3:-73230211 | Msa0139550:CDS |
| GATTGTTGATTGTTCTAATT+GGG | 0.406772 | 1_3:+73232467 | None:intergenic |
| ATGGGTAGACCGTTTGGGCT+TGG | 0.410130 | 1_3:-73230205 | Msa0139550:CDS |
| ATGATATGGGTAGACCGTTT+GGG | 0.419361 | 1_3:-73230210 | Msa0139550:CDS |
| TCCTAACAACGGTTTATTTG+AGG | 0.427212 | 1_3:-73230166 | Msa0139550:CDS |
| GAACAATTATGGATTTAGCT+AGG | 0.431943 | 1_3:-73232404 | Msa0139550:CDS |
| TGACAAGATATTGAACTTGT+TGG | 0.433046 | 1_3:-73229757 | Msa0139550:three_prime_UTR |
| TCTTTGTGGACGAAGAGGTT+TGG | 0.443453 | 1_3:-73230895 | Msa0139550:CDS |
| ACTGTATGTCACAATTGGCT+TGG | 0.444223 | 1_3:-73230086 | Msa0139550:CDS |
| ATTCTGTGATGATTCATTTG+AGG | 0.444580 | 1_3:-73229888 | Msa0139550:three_prime_UTR |
| CGAAATGAGATTGAATTTGA+AGG | 0.447078 | 1_3:+73232519 | None:intergenic |
| ACCCAACAGGGTTATCCTCT+TGG | 0.450020 | 1_3:-73232360 | Msa0139550:CDS |
| CTGTATGTCACAATTGGCTT+GGG | 0.450082 | 1_3:-73230085 | Msa0139550:CDS |
| AGAAAGAAACTTCCATCCTC+TGG | 0.456228 | 1_3:-73230058 | Msa0139550:CDS |
| TGTTCAGTGTTGAAATGAAA+GGG | 0.456955 | 1_3:+73232693 | None:intergenic |
| AACAATTATGGATTTAGCTA+GGG | 0.462844 | 1_3:-73232403 | Msa0139550:CDS |
| CTTGAAACTTCAGATGGAAA+CGG | 0.466933 | 1_3:+73232426 | None:intergenic |
| ACTCCTCAGTGTACACTTCA+AGG | 0.467071 | 1_3:-73232083 | Msa0139550:CDS |
| TAAATGGGCAAATCCAAAAT+CGG | 0.468532 | 1_3:-73232760 | None:intergenic |
| TGTAGATAGGGTGCTGCACT+TGG | 0.473744 | 1_3:-73230836 | Msa0139550:CDS |
| CACTTCTTTCAAATAAAGTC+AGG | 0.480140 | 1_3:+73229786 | None:intergenic |
| CAGGGTTATCCTCTTGGTGT+TGG | 0.489252 | 1_3:-73232354 | Msa0139550:CDS |
| ATTATGGATTTAGCTAGGGT+TGG | 0.490791 | 1_3:-73232399 | Msa0139550:CDS |
| ACCTCAAATAAACCGTTGTT+AGG | 0.493427 | 1_3:+73230165 | None:intergenic |
| ATTGTTCTTGAAACTTCAGA+TGG | 0.496689 | 1_3:+73232420 | None:intergenic |
| GTCAATGTTATTATCAGTGG+TGG | 0.500964 | 1_3:+73232266 | None:intergenic |
| TCAGGATCCGGCTTTGATCA+AGG | 0.506394 | 1_3:-73232045 | Msa0139550:intron |
| GAAATGAGATTGAATTTGAA+GGG | 0.509653 | 1_3:+73232520 | None:intergenic |
| TTGTTCAGTGTTGAAATGAA+AGG | 0.517988 | 1_3:+73232692 | None:intergenic |
| GTATATTATTGCTGTAGATA+GGG | 0.518730 | 1_3:-73230848 | Msa0139550:CDS |
| GAAGATTGAATTGAAATTGA+AGG | 0.519184 | 1_3:+73232633 | None:intergenic |
| TTTCATCTGTGACTTCTCTA+GGG | 0.522593 | 1_3:+73230130 | None:intergenic |
| ACCAAGAGGATAACCCTGTT+GGG | 0.525860 | 1_3:+73232359 | None:intergenic |
| GTTGTTGGTGTAAAACATGA+TGG | 0.527632 | 1_3:+73232570 | None:intergenic |
| CATACAGTTAAATGTTGACT+TGG | 0.529692 | 1_3:+73230101 | None:intergenic |
| ACCTTGACATGAAGTGAAGA+GGG | 0.536966 | 1_3:+73232240 | None:intergenic |
| CATATAGTATTTCAGGCACA+AGG | 0.543248 | 1_3:+73229733 | None:intergenic |
| CACCAAGAGGATAACCCTGT+TGG | 0.548682 | 1_3:+73232358 | None:intergenic |
| CCTTCTCAAAATCCAGAGGA+TGG | 0.550636 | 1_3:+73230046 | None:intergenic |
| ATATTTGATGAAATTGGTAG+TGG | 0.551633 | 1_3:+73229965 | None:intergenic |
| CACAGAAGCAAAGATGATAT+GGG | 0.552316 | 1_3:-73230223 | Msa0139550:CDS |
| TCACTCACCTTGATCAAAGC+CGG | 0.553576 | 1_3:+73232038 | None:intergenic |
| AAAATTTCTAAAGAACTCTA+GGG | 0.557397 | 1_3:+73229708 | None:intergenic |
| AATTCTCAGCAAACTCTCGA+AGG | 0.558854 | 1_3:+73230606 | None:intergenic |
| ATTCTCAGCAAACTCTCGAA+GGG | 0.571271 | 1_3:+73230607 | None:intergenic |
| CTTTCAACGTTAACCCAACA+GGG | 0.573683 | 1_3:-73232372 | Msa0139550:CDS |
| AGGAACGCTCACGAAACCTC+AGG | 0.583087 | 1_3:-73232063 | Msa0139550:CDS |
| AACGCATATCCAAGCCCAAA+CGG | 0.583766 | 1_3:+73230196 | None:intergenic |
| TCTGTGACTTCTCTAGGGAA+AGG | 0.588455 | 1_3:+73230135 | None:intergenic |
| TACCTTGACATGAAGTGAAG+AGG | 0.592658 | 1_3:+73232239 | None:intergenic |
| CCCCTCTTCACTTCATGTCA+AGG | 0.595937 | 1_3:-73232241 | Msa0139550:intron |
| TTGTTTCTTTGTGGACGAAG+AGG | 0.598679 | 1_3:-73230900 | Msa0139550:CDS |
| GGTGTCAATGTTATTATCAG+TGG | 0.602710 | 1_3:+73232263 | None:intergenic |
| TATGTCACAATTGGCTTGGG+AGG | 0.603045 | 1_3:-73230082 | Msa0139550:CDS |
| GATTGAATTGAAATTGAAGG+TGG | 0.604584 | 1_3:+73232636 | None:intergenic |
| GCTCACGAAACCTCAGGATC+CGG | 0.604789 | 1_3:-73232057 | Msa0139550:CDS |
| TTGATCAAAGCCGGATCCTG+AGG | 0.605727 | 1_3:+73232047 | None:intergenic |
| TTCTTTCAAATAAAGTCAGG+AGG | 0.611188 | 1_3:+73229789 | None:intergenic |
| CCAATTTCATCAAATATGCA+AGG | 0.612346 | 1_3:-73229959 | Msa0139550:three_prime_UTR |
| TCAATGTTATTATCAGTGGT+GGG | 0.627423 | 1_3:+73232267 | None:intergenic |
| TTCTCAGCAAACTCTCGAAG+GGG | 0.632254 | 1_3:+73230608 | None:intergenic |
| GAATACAAACACCATAACAA+TGG | 0.639089 | 1_3:+73229907 | None:intergenic |
| AATCGAACACCAACACCAAG+AGG | 0.641303 | 1_3:+73232345 | None:intergenic |
| CTTCTCTAGGGAAAGGAATG+CGG | 0.641717 | 1_3:+73230142 | None:intergenic |
| TCTCAGCAAACTCTCGAAGG+GGG | 0.641945 | 1_3:+73230609 | None:intergenic |
| GTAACCTTCTCAAAATCCAG+AGG | 0.672238 | 1_3:+73230042 | None:intergenic |
| ATATAGTATTTCAGGCACAA+GGG | 0.673526 | 1_3:+73229734 | None:intergenic |
| CTTGACATGAAGTGAAGAGG+GGG | 0.679817 | 1_3:+73232242 | None:intergenic |
| CCTTGACATGAAGTGAAGAG+GGG | 0.702259 | 1_3:+73232241 | None:intergenic |
| GCACTTGGATGACTTCCAGG+AGG | 0.736814 | 1_3:-73230821 | Msa0139550:intron |
| GTTCCTTGAAGTGTACACTG+AGG | 0.794003 | 1_3:+73232080 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGAATGAATTATTAA+TGG | - | chr1_3:73230268-73230287 | Msa0139550:intron | 10.0% |
| !!! | TTTTTGAATGAATTATTAAT+GGG | - | chr1_3:73230269-73230288 | Msa0139550:intron | 10.0% |
| !! | TATGATTGAAATAGAAAAAA+GGG | + | chr1_3:73230176-73230195 | None:intergenic | 15.0% |
| !! | TTATGATTGAAATAGAAAAA+AGG | + | chr1_3:73230177-73230196 | None:intergenic | 15.0% |
| !! | AACTAATGTGATATATTATA+TGG | + | chr1_3:73231059-73231078 | None:intergenic | 15.0% |
| !! | ACTAAATTAACTAATTCAAA+AGG | - | chr1_3:73231271-73231290 | Msa0139550:intron | 15.0% |
| !! | CTAAATTAACTAATTCAAAA+GGG | - | chr1_3:73231272-73231291 | Msa0139550:intron | 15.0% |
| !!! | TGATTGATGATTTTTAATTT+TGG | - | chr1_3:73231301-73231320 | Msa0139550:intron | 15.0% |
| !! | GGATAACAAATAAATAAAAA+TGG | + | chr1_3:73232020-73232039 | None:intergenic | 15.0% |
| !! | TGAATTATTAATGGGATAAT+TGG | - | chr1_3:73230277-73230296 | Msa0139550:intron | 20.0% |
| !!! | TTGGTAACATTTTAGAATTT+CGG | - | chr1_3:73230831-73230850 | Msa0139550:CDS | 20.0% |
| !! | TGAAATTAACACCAATAATA+TGG | - | chr1_3:73231895-73231914 | Msa0139550:intron | 20.0% |
| ! | GAAGATTGAATTGAAATTGA+AGG | + | chr1_3:73229841-73229860 | None:intergenic | 25.0% |
| ! | GAAATGAGATTGAATTTGAA+GGG | + | chr1_3:73229954-73229973 | None:intergenic | 25.0% |
| !! | GATTGTTGATTGTTCTAATT+GGG | + | chr1_3:73230007-73230026 | None:intergenic | 25.0% |
| ! | TGAAGTTTCAAGAACAATTA+TGG | - | chr1_3:73230056-73230075 | Msa0139550:CDS | 25.0% |
| ! | AACAATTATGGATTTAGCTA+GGG | - | chr1_3:73230068-73230087 | Msa0139550:CDS | 25.0% |
| ! | ATTAATGGGATAATTGGAAT+TGG | - | chr1_3:73230283-73230302 | Msa0139550:intron | 25.0% |
| ! | TTAGTATAGATACATATGCA+TGG | - | chr1_3:73230512-73230531 | Msa0139550:intron | 25.0% |
| ! | AATTTAGTCCCTTAAATTGT+AGG | - | chr1_3:73230566-73230585 | Msa0139550:CDS | 25.0% |
| ! | AAACTAATGTGATCTATTGT+TGG | + | chr1_3:73230595-73230614 | None:intergenic | 25.0% |
| !! | ATTAGTTTGAATCAAGTAAG+TGG | - | chr1_3:73230607-73230626 | Msa0139550:CDS | 25.0% |
| ! | ACTAATTTGACTAACTCAAA+AGG | - | chr1_3:73230782-73230801 | Msa0139550:intron | 25.0% |
| !! | GGTCTAAAATTAAGTTCAAT+TGG | - | chr1_3:73230852-73230871 | Msa0139550:CDS | 25.0% |
| ! | TGATCTCTTAAATGAACAAA+AGG | - | chr1_3:73231026-73231045 | Msa0139550:intron | 25.0% |
| !!! | TTATTTTTGTATCAACCATC+CGG | + | chr1_3:73231218-73231237 | None:intergenic | 25.0% |
| ! | TTAATTACCGAGAATTTCTA+GGG | - | chr1_3:73231342-73231361 | Msa0139550:intron | 25.0% |
| ! | TGTATATTATTGCTGTAGAT+AGG | - | chr1_3:73231622-73231641 | Msa0139550:intron | 25.0% |
| ! | GTATATTATTGCTGTAGATA+GGG | - | chr1_3:73231623-73231642 | Msa0139550:intron | 25.0% |
| ! | TTGCTGATACTAATTGTAAT+AGG | - | chr1_3:73231727-73231746 | Msa0139550:intron | 25.0% |
| ! | AGTAATGTCTTCCATATTAT+TGG | + | chr1_3:73231909-73231928 | None:intergenic | 25.0% |
| !! | TTGTAATGTCTATGTTGATT+TGG | - | chr1_3:73231934-73231953 | Msa0139550:intron | 25.0% |
| !! | TTGTTATCCTTTGATTTAAC+TGG | - | chr1_3:73232031-73232050 | Msa0139550:intron | 25.0% |
| ! | CTAACTTCAAAACAATATTG+AGG | - | chr1_3:73232167-73232186 | Msa0139550:intron | 25.0% |
| ! | ATTTAACTGTATGTCACAAT+TGG | - | chr1_3:73232380-73232399 | Msa0139550:CDS | 25.0% |
| ! | ATATTTGATGAAATTGGTAG+TGG | + | chr1_3:73232509-73232528 | None:intergenic | 25.0% |
| TGTTGAAATGAAAGGGAAAA+TGG | + | chr1_3:73229774-73229793 | None:intergenic | 30.0% | |
| ! | TGTTCAGTGTTGAAATGAAA+GGG | + | chr1_3:73229781-73229800 | None:intergenic | 30.0% |
| ! | TTGTTCAGTGTTGAAATGAA+AGG | + | chr1_3:73229782-73229801 | None:intergenic | 30.0% |
| !!! | GTTGTGTTTTTTGTTCTTGT+TGG | + | chr1_3:73229816-73229835 | None:intergenic | 30.0% |
| GATTGAATTGAAATTGAAGG+TGG | + | chr1_3:73229838-73229857 | None:intergenic | 30.0% | |
| CGAAATGAGATTGAATTTGA+AGG | + | chr1_3:73229955-73229974 | None:intergenic | 30.0% | |
| ! | CGATTGTTGATTGTTCTAAT+TGG | + | chr1_3:73230008-73230027 | None:intergenic | 30.0% |
| ATTGTTCTTGAAACTTCAGA+TGG | + | chr1_3:73230054-73230073 | None:intergenic | 30.0% | |
| GAACAATTATGGATTTAGCT+AGG | - | chr1_3:73230067-73230086 | Msa0139550:CDS | 30.0% | |
| !! | TTCGTTATTGATTCTGAAGA+TGG | - | chr1_3:73230147-73230166 | Msa0139550:CDS | 30.0% |
| TCAATGTTATTATCAGTGGT+GGG | + | chr1_3:73230207-73230226 | None:intergenic | 30.0% | |
| GGATAATTGGAATTGGAATT+GGG | - | chr1_3:73230290-73230309 | Msa0139550:intron | 30.0% | |
| TTTGAATCAAGTAAGTGGTT+TGG | - | chr1_3:73230612-73230631 | Msa0139550:CDS | 30.0% | |
| AGTACCTGAATTTGATTCTT+GGG | - | chr1_3:73230677-73230696 | Msa0139550:intron | 30.0% | |
| ! | ATTTTCAGAACCCATTTTCT+TGG | - | chr1_3:73230748-73230767 | Msa0139550:intron | 30.0% |
| ! | TGATTGAGGATTTTCAATGT+TGG | - | chr1_3:73230812-73230831 | Msa0139550:intron | 30.0% |
| TAAGTTCAATTGGACAATGT+TGG | - | chr1_3:73230862-73230881 | Msa0139550:CDS | 30.0% | |
| TAAACCGTTAGTATTAGTGA+AGG | - | chr1_3:73230924-73230943 | Msa0139550:intron | 30.0% | |
| TGTACCTTCACTAATACTAA+CGG | + | chr1_3:73230931-73230950 | None:intergenic | 30.0% | |
| TCACAGTTTGAAAAAACCTT+AGG | + | chr1_3:73230956-73230975 | None:intergenic | 30.0% | |
| TGGTTAATGAGTTTCAGTTA+AGG | - | chr1_3:73231102-73231121 | Msa0139550:intron | 30.0% | |
| GTTAATTACCGAGAATTTCT+AGG | - | chr1_3:73231341-73231360 | Msa0139550:intron | 30.0% | |
| AACTTATCCCTAGAAATTCT+CGG | + | chr1_3:73231352-73231371 | None:intergenic | 30.0% | |
| AAAGTGATTGATGTTGACAA+AGG | - | chr1_3:73231423-73231442 | Msa0139550:intron | 30.0% | |
| GCTATATGAAACTACAATCA+AGG | + | chr1_3:73231484-73231503 | None:intergenic | 30.0% | |
| !! | AGTCGTTTTGTTGTATAAGT+TGG | - | chr1_3:73231773-73231792 | Msa0139550:intron | 30.0% |
| ! | AGCATTTTTGTAGTCTAAAG+AGG | + | chr1_3:73231834-73231853 | None:intergenic | 30.0% |
| AAATGCTGTGTAGATAAATC+AGG | + | chr1_3:73232061-73232080 | None:intergenic | 30.0% | |
| ACACAGCAAAACTAACTTAT+CGG | + | chr1_3:73232194-73232213 | None:intergenic | 30.0% | |
| ! | TGTATTTGATTTCCCATTGT+AGG | - | chr1_3:73232224-73232243 | Msa0139550:intron | 30.0% |
| ! | CATACAGTTAAATGTTGACT+TGG | + | chr1_3:73232373-73232392 | None:intergenic | 30.0% |
| CCTTGCATATTTGATGAAAT+TGG | + | chr1_3:73232515-73232534 | None:intergenic | 30.0% | |
| CCAATTTCATCAAATATGCA+AGG | - | chr1_3:73232512-73232531 | Msa0139550:CDS | 30.0% | |
| CAAGAATATGACCATTGTTA+TGG | - | chr1_3:73232553-73232572 | Msa0139550:CDS | 30.0% | |
| GAATACAAACACCATAACAA+TGG | + | chr1_3:73232567-73232586 | None:intergenic | 30.0% | |
| ATTCTGTGATGATTCATTTG+AGG | - | chr1_3:73232583-73232602 | Msa0139550:CDS | 30.0% | |
| !! | TTGTTTTGCAAGGCAATTTT+TGG | - | chr1_3:73232637-73232656 | Msa0139550:five_prime_UTR | 30.0% |
| TTCTTTCAAATAAAGTCAGG+AGG | + | chr1_3:73232685-73232704 | None:intergenic | 30.0% | |
| CACTTCTTTCAAATAAAGTC+AGG | + | chr1_3:73232688-73232707 | None:intergenic | 30.0% | |
| TGACAAGATATTGAACTTGT+TGG | - | chr1_3:73232714-73232733 | Msa0139550:five_prime_UTR | 30.0% | |
| ATATAGTATTTCAGGCACAA+GGG | + | chr1_3:73232740-73232759 | None:intergenic | 30.0% | |
| TAGGGTTCATATAGTATTTC+AGG | + | chr1_3:73232748-73232767 | None:intergenic | 30.0% | |
| ! | CAATGTGTCTTTTCCGATTT+TGG | + | chr1_3:73229727-73229746 | None:intergenic | 35.0% |
| GTTGTTGGTGTAAAACATGA+TGG | + | chr1_3:73229904-73229923 | None:intergenic | 35.0% | |
| !!! | TTGGTGTTTGGTTTTGTTGT+TGG | + | chr1_3:73229919-73229938 | None:intergenic | 35.0% |
| !!! | TGTGTTGAGATTTTGGTGTT+TGG | + | chr1_3:73229931-73229950 | None:intergenic | 35.0% |
| CTTGAAACTTCAGATGGAAA+CGG | + | chr1_3:73230048-73230067 | None:intergenic | 35.0% | |
| ATTATGGATTTAGCTAGGGT+TGG | - | chr1_3:73230072-73230091 | Msa0139550:CDS | 35.0% | |
| GTCAATGTTATTATCAGTGG+TGG | + | chr1_3:73230208-73230227 | None:intergenic | 35.0% | |
| GGTGTCAATGTTATTATCAG+TGG | + | chr1_3:73230211-73230230 | None:intergenic | 35.0% | |
| GGGATAATTGGAATTGGAAT+TGG | - | chr1_3:73230289-73230308 | Msa0139550:intron | 35.0% | |
| GAGTACCTGAATTTGATTCT+TGG | - | chr1_3:73230676-73230695 | Msa0139550:intron | 35.0% | |
| TCTACCCAAGAATCAAATTC+AGG | + | chr1_3:73230684-73230703 | None:intergenic | 35.0% | |
| TTCTTGGGTAGAACAATTTG+TGG | - | chr1_3:73230692-73230711 | Msa0139550:intron | 35.0% | |
| TCTGCATTGTCCAAGAAAAT+GGG | + | chr1_3:73230761-73230780 | None:intergenic | 35.0% | |
| CAAAAGGACTAATGTGATTG+AGG | - | chr1_3:73230798-73230817 | Msa0139550:intron | 35.0% | |
| ! | TTAGTGAAGGTACATACCTA+AGG | - | chr1_3:73230937-73230956 | Msa0139550:intron | 35.0% |
| AGTTTAGTTGCTGAAATCGT+AGG | - | chr1_3:73230991-73231010 | Msa0139550:intron | 35.0% | |
| AACAATCTTTGGCCAAACTT+TGG | - | chr1_3:73231164-73231183 | Msa0139550:intron | 35.0% | |
| TTTAGTCTCTACAATTGTCC+AGG | + | chr1_3:73231257-73231276 | None:intergenic | 35.0% | |
| ! | GAGAATTTCTAGGGATAAGT+TGG | - | chr1_3:73231351-73231370 | Msa0139550:intron | 35.0% |
| AAACTACAATCAAGGTCACA+AGG | + | chr1_3:73231476-73231495 | None:intergenic | 35.0% | |
| ATACAACAAAACGACTTGCA+AGG | + | chr1_3:73231769-73231788 | None:intergenic | 35.0% | |
| !!! | TATGTCCTTGTTTTTCAGGA+CGG | - | chr1_3:73231797-73231816 | Msa0139550:intron | 35.0% |
| !! | CTATGTTGATTTGGATTTCC+AGG | - | chr1_3:73231943-73231962 | Msa0139550:intron | 35.0% |
| TCACAGAAGCAAAGATGATA+TGG | - | chr1_3:73232247-73232266 | Msa0139550:CDS | 35.0% | |
| CACAGAAGCAAAGATGATAT+GGG | - | chr1_3:73232248-73232267 | Msa0139550:CDS | 35.0% | |
| !! | CGTTTGTTTTCTCCTAACAA+CGG | - | chr1_3:73232294-73232313 | Msa0139550:CDS | 35.0% |
| TCCTAACAACGGTTTATTTG+AGG | - | chr1_3:73232305-73232324 | Msa0139550:CDS | 35.0% | |
| ACCTCAAATAAACCGTTGTT+AGG | + | chr1_3:73232309-73232328 | None:intergenic | 35.0% | |
| TTTCATCTGTGACTTCTCTA+GGG | + | chr1_3:73232344-73232363 | None:intergenic | 35.0% | |
| ! | TTTTCATCTGTGACTTCTCT+AGG | + | chr1_3:73232345-73232364 | None:intergenic | 35.0% |
| AGAGAAGTCACAGATGAAAA+AGG | - | chr1_3:73232345-73232364 | Msa0139550:CDS | 35.0% | |
| !!! | AAGACTGATCTTGTTTTGCA+AGG | - | chr1_3:73232627-73232646 | Msa0139550:five_prime_UTR | 35.0% |
| CATATAGTATTTCAGGCACA+AGG | + | chr1_3:73232741-73232760 | None:intergenic | 35.0% | |
| !! | TGAAGGGTGTGTTGAGATTT+TGG | + | chr1_3:73229938-73229957 | None:intergenic | 40.0% |
| ACTTTCAACGTTAACCCAAC+AGG | - | chr1_3:73230098-73230117 | Msa0139550:CDS | 40.0% | |
| CTTTCAACGTTAACCCAACA+GGG | - | chr1_3:73230099-73230118 | Msa0139550:CDS | 40.0% | |
| ACCTTGACATGAAGTGAAGA+GGG | + | chr1_3:73230234-73230253 | None:intergenic | 40.0% | |
| TACCTTGACATGAAGTGAAG+AGG | + | chr1_3:73230235-73230254 | None:intergenic | 40.0% | |
| ! | GTCAATCAGTTTTTGCAGTC+TGG | - | chr1_3:73230358-73230377 | Msa0139550:intron | 40.0% |
| ! | AGTTTTTGCAGTCTGGATTG+AGG | - | chr1_3:73230365-73230384 | Msa0139550:intron | 40.0% |
| GTTGGACGCCTACAATTTAA+GGG | + | chr1_3:73230577-73230596 | None:intergenic | 40.0% | |
| TGTTGGACGCCTACAATTTA+AGG | + | chr1_3:73230578-73230597 | None:intergenic | 40.0% | |
| ! | AGTAAGTGGTTTGGCTTAAG+TGG | - | chr1_3:73230621-73230640 | Msa0139550:CDS | 40.0% |
| GTCGAGAGGCAAGTAAAAAT+TGG | + | chr1_3:73230718-73230737 | None:intergenic | 40.0% | |
| CTCTGCATTGTCCAAGAAAA+TGG | + | chr1_3:73230762-73230781 | None:intergenic | 40.0% | |
| AACAAGAAGCTCAACTCAAG+TGG | - | chr1_3:73231082-73231101 | Msa0139550:intron | 40.0% | |
| ! | GCCAAAGATTGTTCTAGCTA+GGG | + | chr1_3:73231157-73231176 | None:intergenic | 40.0% |
| AACATTGCATTAGTTCGTCC+TGG | - | chr1_3:73231236-73231255 | Msa0139550:intron | 40.0% | |
| GTGATTGATGTTGACAAAGG+TGG | - | chr1_3:73231426-73231445 | Msa0139550:intron | 40.0% | |
| CAATCAAGGTCACAAGGTAA+GGG | + | chr1_3:73231470-73231489 | None:intergenic | 40.0% | |
| ACAATCAAGGTCACAAGGTA+AGG | + | chr1_3:73231471-73231490 | None:intergenic | 40.0% | |
| ! | TTGTTTCTTTGTGGACGAAG+AGG | - | chr1_3:73231571-73231590 | Msa0139550:intron | 40.0% |
| !!! | TGGCTATGTCCTTGTTTTTC+AGG | - | chr1_3:73231793-73231812 | Msa0139550:intron | 40.0% |
| ATTCTCAGCAAACTCTCGAA+GGG | + | chr1_3:73231867-73231886 | None:intergenic | 40.0% | |
| AATTCTCAGCAAACTCTCGA+AGG | + | chr1_3:73231868-73231887 | None:intergenic | 40.0% | |
| !! | ATACATGCAGGAAAAGTACC+TGG | + | chr1_3:73231964-73231983 | None:intergenic | 40.0% |
| CATGCTATGTAGATACATGC+AGG | + | chr1_3:73231976-73231995 | None:intergenic | 40.0% | |
| AGGTGCACCAGTTAAATCAA+AGG | + | chr1_3:73232041-73232060 | None:intergenic | 40.0% | |
| TGCATAAATACAGTCACAGC+AGG | + | chr1_3:73232100-73232119 | None:intergenic | 40.0% | |
| TTGCTTCTGTGACCTACAAT+GGG | + | chr1_3:73232239-73232258 | None:intergenic | 40.0% | |
| TTTGCTTCTGTGACCTACAA+TGG | + | chr1_3:73232240-73232259 | None:intergenic | 40.0% | |
| ATGATATGGGTAGACCGTTT+GGG | - | chr1_3:73232261-73232280 | Msa0139550:CDS | 40.0% | |
| ACTGTATGTCACAATTGGCT+TGG | - | chr1_3:73232385-73232404 | Msa0139550:CDS | 40.0% | |
| ! | CTGTATGTCACAATTGGCTT+GGG | - | chr1_3:73232386-73232405 | Msa0139550:CDS | 40.0% |
| AGAAAGAAACTTCCATCCTC+TGG | - | chr1_3:73232413-73232432 | Msa0139550:CDS | 40.0% | |
| GTAACCTTCTCAAAATCCAG+AGG | + | chr1_3:73232432-73232451 | None:intergenic | 40.0% | |
| ! | GTTTTTGTCTAGTCTGTTGC+AGG | - | chr1_3:73232659-73232678 | Msa0139550:five_prime_UTR | 40.0% |
| ACCAAGAGGATAACCCTGTT+GGG | + | chr1_3:73230115-73230134 | None:intergenic | 45.0% | |
| AATCGAACACCAACACCAAG+AGG | + | chr1_3:73230129-73230148 | None:intergenic | 45.0% | |
| CTTGACATGAAGTGAAGAGG+GGG | + | chr1_3:73230232-73230251 | None:intergenic | 45.0% | |
| CCTTGACATGAAGTGAAGAG+GGG | + | chr1_3:73230233-73230252 | None:intergenic | 45.0% | |
| ACTCCTCAGTGTACACTTCA+AGG | - | chr1_3:73230388-73230407 | Msa0139550:intron | 45.0% | |
| GTTCCTTGAAGTGTACACTG+AGG | + | chr1_3:73230394-73230413 | None:intergenic | 45.0% | |
| TCACTCACCTTGATCAAAGC+CGG | + | chr1_3:73230436-73230455 | None:intergenic | 45.0% | |
| CTTTGATCAAGGTGAGTGAG+TGG | - | chr1_3:73230437-73230456 | Msa0139550:intron | 45.0% | |
| AAATCCAGAGTTGAGTCGAG+AGG | + | chr1_3:73230732-73230751 | None:intergenic | 45.0% | |
| GCCCTAGCTAGAACAATCTT+TGG | - | chr1_3:73231153-73231172 | Msa0139550:intron | 45.0% | |
| ! | GGCCAAAGATTGTTCTAGCT+AGG | + | chr1_3:73231158-73231177 | None:intergenic | 45.0% |
| TCCGGTTTCCAGAGGAAAAA+GGG | + | chr1_3:73231200-73231219 | None:intergenic | 45.0% | |
| ATCCGGTTTCCAGAGGAAAA+AGG | + | chr1_3:73231201-73231220 | None:intergenic | 45.0% | |
| !! | TTTTTCCTCTGGAAACCGGA+TGG | - | chr1_3:73231200-73231219 | Msa0139550:intron | 45.0% |
| ACAGAACACACAAGCGTAGA+TGG | + | chr1_3:73231516-73231535 | None:intergenic | 45.0% | |
| TTTCTATTGCCACTCCACAG+CGG | - | chr1_3:73231547-73231566 | Msa0139550:intron | 45.0% | |
| TCTTTGTGGACGAAGAGGTT+TGG | - | chr1_3:73231576-73231595 | Msa0139550:intron | 45.0% | |
| ACACACCGTCCTGAAAAACA+AGG | + | chr1_3:73231805-73231824 | None:intergenic | 45.0% | |
| !!! | TTGTTTTTCAGGACGGTGTG+TGG | - | chr1_3:73231804-73231823 | Msa0139550:intron | 45.0% |
| TTCTCAGCAAACTCTCGAAG+GGG | + | chr1_3:73231866-73231885 | None:intergenic | 45.0% | |
| GATGATATGGGTAGACCGTT+TGG | - | chr1_3:73232260-73232279 | Msa0139550:CDS | 45.0% | |
| AACGCATATCCAAGCCCAAA+CGG | + | chr1_3:73232278-73232297 | None:intergenic | 45.0% | |
| ! | CTTCTCTAGGGAAAGGAATG+CGG | + | chr1_3:73232332-73232351 | None:intergenic | 45.0% |
| ! | TCTGTGACTTCTCTAGGGAA+AGG | + | chr1_3:73232339-73232358 | None:intergenic | 45.0% |
| !! | TATGTCACAATTGGCTTGGG+AGG | - | chr1_3:73232389-73232408 | Msa0139550:CDS | 45.0% |
| CCTTCTCAAAATCCAGAGGA+TGG | + | chr1_3:73232428-73232447 | None:intergenic | 45.0% | |
| !! | CCATCCTCTGGATTTTGAGA+AGG | - | chr1_3:73232425-73232444 | Msa0139550:CDS | 45.0% |
| !! | TATAATTTAATAAAAATGAA+GGG | + | chr1_3:73231687-73231706 | None:intergenic | 5.0% |
| !! | ATATAATTTAATAAAAATGA+AGG | + | chr1_3:73231688-73231707 | None:intergenic | 5.0% |
| ACCCAACAGGGTTATCCTCT+TGG | - | chr1_3:73230111-73230130 | Msa0139550:CDS | 50.0% | |
| CACCAAGAGGATAACCCTGT+TGG | + | chr1_3:73230116-73230135 | None:intergenic | 50.0% | |
| ! | CAGGGTTATCCTCTTGGTGT+TGG | - | chr1_3:73230117-73230136 | Msa0139550:CDS | 50.0% |
| CCCCTCTTCACTTCATGTCA+AGG | - | chr1_3:73230230-73230249 | Msa0139550:intron | 50.0% | |
| TTGATCAAAGCCGGATCCTG+AGG | + | chr1_3:73230427-73230446 | None:intergenic | 50.0% | |
| ! | TCAGGATCCGGCTTTGATCA+AGG | - | chr1_3:73230426-73230445 | Msa0139550:intron | 50.0% |
| ! | TTCTAGCTAGGGCTCGAACT+CGG | + | chr1_3:73231146-73231165 | None:intergenic | 50.0% |
| ! | GGCTCTGGTAGTCCAAAGTT+TGG | + | chr1_3:73231179-73231198 | None:intergenic | 50.0% |
| ! | TACCAGAGCCCTTTTTCCTC+TGG | - | chr1_3:73231189-73231208 | Msa0139550:intron | 50.0% |
| TTCCAGAGGAAAAAGGGCTC+TGG | + | chr1_3:73231194-73231213 | None:intergenic | 50.0% | |
| !! | GCCCTTTTTCCTCTGGAAAC+CGG | - | chr1_3:73231196-73231215 | Msa0139550:intron | 50.0% |
| ATCAACCATCCGGTTTCCAG+AGG | + | chr1_3:73231208-73231227 | None:intergenic | 50.0% | |
| CACAAAGAAACAAGCCGCTG+TGG | + | chr1_3:73231564-73231583 | None:intergenic | 50.0% | |
| ! | CACAGCGGCTTGTTTCTTTG+TGG | - | chr1_3:73231562-73231581 | Msa0139550:intron | 50.0% |
| !! | TGTAGATAGGGTGCTGCACT+TGG | - | chr1_3:73231635-73231654 | Msa0139550:intron | 50.0% |
| TTGGATGACTTCCAGGAGGT+AGG | - | chr1_3:73231654-73231673 | Msa0139550:intron | 50.0% | |
| TGGATGACTTCCAGGAGGTA+GGG | - | chr1_3:73231655-73231674 | Msa0139550:intron | 50.0% | |
| TCTCAGCAAACTCTCGAAGG+GGG | + | chr1_3:73231865-73231884 | None:intergenic | 50.0% | |
| AGGAACGCTCACGAAACCTC+AGG | - | chr1_3:73230408-73230427 | Msa0139550:intron | 55.0% | |
| GCTCACGAAACCTCAGGATC+CGG | - | chr1_3:73230414-73230433 | Msa0139550:intron | 55.0% | |
| CTTGCCTCTCGACTCAACTC+TGG | - | chr1_3:73230725-73230744 | Msa0139550:intron | 55.0% | |
| TCTAGCTAGGGCTCGAACTC+GGG | + | chr1_3:73231145-73231164 | None:intergenic | 55.0% | |
| AGAAACAAGCCGCTGTGGAG+TGG | + | chr1_3:73231559-73231578 | None:intergenic | 55.0% | |
| GCTGCACTTGGATGACTTCC+AGG | - | chr1_3:73231647-73231666 | Msa0139550:intron | 55.0% | |
| GCACTTGGATGACTTCCAGG+AGG | - | chr1_3:73231650-73231669 | Msa0139550:intron | 55.0% | |
| ATGGGTAGACCGTTTGGGCT+TGG | - | chr1_3:73232266-73232285 | Msa0139550:CDS | 55.0% | |
| AGGGTCAAGTCCCTACCTCC+TGG | + | chr1_3:73231668-73231687 | None:intergenic | 60.0% | |
| GCAAACTCTCGAAGGGGGTC+AGG | + | chr1_3:73231860-73231879 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 73229717 | 73232776 | 73229717 | ID=Msa0139550;Name=Msa0139550 |
| chr1_3 | mRNA | 73229717 | 73232776 | 73229717 | ID=Msa0139550-mRNA-1;Parent=Msa0139550;Name=Msa0139550-mRNA-1;_AED=0.04;_eAED=0.04;_QI=154|1|1|1|1|1|5|300|315 |
| chr1_3 | exon | 73229717 | 73230247 | 73229717 | ID=Msa0139550-mRNA-1:exon:25537;Parent=Msa0139550-mRNA-1 |
| chr1_3 | exon | 73230529 | 73230678 | 73230529 | ID=Msa0139550-mRNA-1:exon:25536;Parent=Msa0139550-mRNA-1 |
| chr1_3 | exon | 73230822 | 73230926 | 73230822 | ID=Msa0139550-mRNA-1:exon:25535;Parent=Msa0139550-mRNA-1 |
| chr1_3 | exon | 73232046 | 73232126 | 73232046 | ID=Msa0139550-mRNA-1:exon:25534;Parent=Msa0139550-mRNA-1 |
| chr1_3 | exon | 73232242 | 73232776 | 73232242 | ID=Msa0139550-mRNA-1:exon:25533;Parent=Msa0139550-mRNA-1 |
| chr1_3 | five_prime_UTR | 73232623 | 73232776 | 73232623 | ID=Msa0139550-mRNA-1:five_prime_utr;Parent=Msa0139550-mRNA-1 |
| chr1_3 | CDS | 73232242 | 73232622 | 73232242 | ID=Msa0139550-mRNA-1:cds;Parent=Msa0139550-mRNA-1 |
| chr1_3 | CDS | 73232046 | 73232126 | 73232046 | ID=Msa0139550-mRNA-1:cds;Parent=Msa0139550-mRNA-1 |
| chr1_3 | CDS | 73230822 | 73230926 | 73230822 | ID=Msa0139550-mRNA-1:cds;Parent=Msa0139550-mRNA-1 |
| chr1_3 | CDS | 73230529 | 73230678 | 73230529 | ID=Msa0139550-mRNA-1:cds;Parent=Msa0139550-mRNA-1 |
| chr1_3 | CDS | 73230017 | 73230247 | 73230017 | ID=Msa0139550-mRNA-1:cds;Parent=Msa0139550-mRNA-1 |
| chr1_3 | three_prime_UTR | 73229717 | 73230016 | 73229717 | ID=Msa0139550-mRNA-1:three_prime_utr;Parent=Msa0139550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
