Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601790 | XP_003606369.2 | 98.932 | 936 | 10 | 0 | 1 | 936 | 1 | 936 | 0.0 | 1936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0601790 | 0.812307 | 4.529276e-51 | -8.615850e-47 |
| Msa0004180 | Msa0601790 | -0.806773 | 6.989419e-50 | -8.615850e-47 |
| Msa0026420 | Msa0601790 | 0.814190 | 1.747848e-51 | -8.615850e-47 |
| Msa0027020 | Msa0601790 | -0.835395 | 1.720586e-56 | -8.615850e-47 |
| Msa0033970 | Msa0601790 | 0.803793 | 2.942458e-49 | -8.615850e-47 |
| Msa0037280 | Msa0601790 | 0.817275 | 3.587817e-52 | -8.615850e-47 |
| Msa0039890 | Msa0601790 | 0.859906 | 2.989904e-63 | -8.615850e-47 |
| Msa0042520 | Msa0601790 | -0.810355 | 1.201454e-50 | -8.615850e-47 |
| Msa0046020 | Msa0601790 | -0.802723 | 4.899261e-49 | -8.615850e-47 |
| Msa0052780 | Msa0601790 | 0.816424 | 5.569921e-52 | -8.615850e-47 |
| Msa0074860 | Msa0601790 | -0.840420 | 8.787580e-58 | -8.615850e-47 |
| Msa0075990 | Msa0601790 | -0.807032 | 6.161719e-50 | -8.615850e-47 |
| Msa0081700 | Msa0601790 | -0.802493 | 5.465266e-49 | -8.615850e-47 |
| Msa0087550 | Msa0601790 | 0.887141 | 1.851240e-72 | -8.615850e-47 |
| Msa0093360 | Msa0601790 | -0.800113 | 1.678183e-48 | -8.615850e-47 |
| Msa0097570 | Msa0601790 | 0.808176 | 3.522405e-50 | -8.615850e-47 |
| Msa0127350 | Msa0601790 | -0.809654 | 1.700793e-50 | -8.615850e-47 |
| Msa0127910 | Msa0601790 | -0.809055 | 2.285731e-50 | -8.615850e-47 |
| Msa0128030 | Msa0601790 | 0.805123 | 1.553597e-49 | -8.615850e-47 |
| Msa0129640 | Msa0601790 | 0.822393 | 2.427105e-53 | -8.615850e-47 |
| Msa0134270 | Msa0601790 | 0.887172 | 1.801572e-72 | -8.615850e-47 |
| Msa0138340 | Msa0601790 | -0.801686 | 8.010602e-49 | -8.615850e-47 |
| Msa0143640 | Msa0601790 | 0.831406 | 1.699646e-55 | -8.615850e-47 |
| Msa0147960 | Msa0601790 | -0.803252 | 3.809857e-49 | -8.615850e-47 |
| Msa0159240 | Msa0601790 | -0.815166 | 1.062812e-51 | -8.615850e-47 |
| Msa0167160 | Msa0601790 | -0.837941 | 3.860292e-57 | -8.615850e-47 |
| Msa0168770 | Msa0601790 | -0.800252 | 1.572564e-48 | -8.615850e-47 |
| Msa0174060 | Msa0601790 | -0.809708 | 1.655327e-50 | -8.615850e-47 |
| Msa0180820 | Msa0601790 | 0.866401 | 2.929297e-65 | -8.615850e-47 |
| Msa0182020 | Msa0601790 | 0.801902 | 7.230700e-49 | -8.615850e-47 |
| Msa0186240 | Msa0601790 | 0.808939 | 2.420226e-50 | -8.615850e-47 |
| Msa0216150 | Msa0601790 | -0.810477 | 1.130283e-50 | -8.615850e-47 |
| Msa0224210 | Msa0601790 | 0.824743 | 6.841808e-54 | -8.615850e-47 |
| Msa0225280 | Msa0601790 | -0.814416 | 1.558305e-51 | -8.615850e-47 |
| Msa0232160 | Msa0601790 | -0.810005 | 1.429071e-50 | -8.615850e-47 |
| Msa0236690 | Msa0601790 | -0.806367 | 8.512790e-50 | -8.615850e-47 |
| Msa0368620 | Msa0601790 | 0.830836 | 2.347026e-55 | -8.615850e-47 |
| Msa0371010 | Msa0601790 | -0.803425 | 3.507868e-49 | -8.615850e-47 |
| Msa0382020 | Msa0601790 | -0.807286 | 5.443229e-50 | -8.615850e-47 |
| Msa0389710 | Msa0601790 | 0.829502 | 4.966278e-55 | -8.615850e-47 |
| Msa0390590 | Msa0601790 | -0.812422 | 4.274482e-51 | -8.615850e-47 |
| Msa0390790 | Msa0601790 | 0.827663 | 1.381548e-54 | -8.615850e-47 |
| Msa0393100 | Msa0601790 | 0.814812 | 1.273174e-51 | -8.615850e-47 |
| Msa0402800 | Msa0601790 | 0.833292 | 5.799677e-56 | -8.615850e-47 |
| Msa0403740 | Msa0601790 | -0.810723 | 1.000430e-50 | -8.615850e-47 |
| Msa0405200 | Msa0601790 | 0.814675 | 1.365136e-51 | -8.615850e-47 |
| Msa0415760 | Msa0601790 | -0.807795 | 4.244548e-50 | -8.615850e-47 |
| Msa0416040 | Msa0601790 | 0.811930 | 5.471396e-51 | -8.615850e-47 |
| Msa0417790 | Msa0601790 | -0.801355 | 9.361344e-49 | -8.615850e-47 |
| Msa0419150 | Msa0601790 | -0.810010 | 1.425467e-50 | -8.615850e-47 |
| Msa0427230 | Msa0601790 | -0.807565 | 4.749348e-50 | -8.615850e-47 |
| Msa0427560 | Msa0601790 | 0.815714 | 8.024491e-52 | -8.615850e-47 |
| Msa0428720 | Msa0601790 | -0.810871 | 9.292236e-51 | -8.615850e-47 |
| Msa0429840 | Msa0601790 | 0.824450 | 8.020402e-54 | -8.615850e-47 |
| Msa0434830 | Msa0601790 | -0.800270 | 1.559483e-48 | -8.615850e-47 |
| Msa0437820 | Msa0601790 | -0.802714 | 4.920056e-49 | -8.615850e-47 |
| Msa0449490 | Msa0601790 | 0.804426 | 2.172964e-49 | -8.615850e-47 |
| Msa0449500 | Msa0601790 | 0.829972 | 3.815971e-55 | -8.615850e-47 |
| Msa0449620 | Msa0601790 | 0.811297 | 7.513304e-51 | -8.615850e-47 |
| Msa0456450 | Msa0601790 | -0.810346 | 1.206738e-50 | -8.615850e-47 |
| Msa0459150 | Msa0601790 | 0.803153 | 3.992735e-49 | -8.615850e-47 |
| Msa0460510 | Msa0601790 | -0.805713 | 1.168563e-49 | -8.615850e-47 |
| Msa0464360 | Msa0601790 | 0.817725 | 2.841177e-52 | -8.615850e-47 |
| Msa0464980 | Msa0601790 | -0.811421 | 7.061054e-51 | -8.615850e-47 |
| Msa0473740 | Msa0601790 | -0.808643 | 2.800641e-50 | -8.615850e-47 |
| Msa0476600 | Msa0601790 | -0.810314 | 1.225775e-50 | -8.615850e-47 |
| Msa0478080 | Msa0601790 | 0.803768 | 2.978030e-49 | -8.615850e-47 |
| Msa0480260 | Msa0601790 | 0.825871 | 3.700501e-54 | -8.615850e-47 |
| Msa0480530 | Msa0601790 | 0.823110 | 1.652253e-53 | -8.615850e-47 |
| Msa0480540 | Msa0601790 | 0.825023 | 5.877091e-54 | -8.615850e-47 |
| Msa0480550 | Msa0601790 | 0.823349 | 1.452882e-53 | -8.615850e-47 |
| Msa0481770 | Msa0601790 | 0.808780 | 2.617403e-50 | -8.615850e-47 |
| Msa0240630 | Msa0601790 | -0.806841 | 6.762293e-50 | -8.615850e-47 |
| Msa0246140 | Msa0601790 | 0.840662 | 7.596153e-58 | -8.615850e-47 |
| Msa0254640 | Msa0601790 | 0.834660 | 2.635998e-56 | -8.615850e-47 |
| Msa0259770 | Msa0601790 | -0.803667 | 3.125279e-49 | -8.615850e-47 |
| Msa0265480 | Msa0601790 | 0.812874 | 3.404052e-51 | -8.615850e-47 |
| Msa0266330 | Msa0601790 | -0.801201 | 1.007060e-48 | -8.615850e-47 |
| Msa0267700 | Msa0601790 | 0.809236 | 2.090655e-50 | -8.615850e-47 |
| Msa0269710 | Msa0601790 | 0.804150 | 2.479617e-49 | -8.615850e-47 |
| Msa0284730 | Msa0601790 | 0.840476 | 8.497653e-58 | -8.615850e-47 |
| Msa0306310 | Msa0601790 | 0.808985 | 2.366770e-50 | -8.615850e-47 |
| Msa0310270 | Msa0601790 | -0.823248 | 1.534068e-53 | -8.615850e-47 |
| Msa0319680 | Msa0601790 | 0.846511 | 2.074759e-59 | -8.615850e-47 |
| Msa0332360 | Msa0601790 | 0.855642 | 5.499640e-62 | -8.615850e-47 |
| Msa0340370 | Msa0601790 | 0.833502 | 5.140997e-56 | -8.615850e-47 |
| Msa0340700 | Msa0601790 | -0.803613 | 3.206066e-49 | -8.615850e-47 |
| Msa0345050 | Msa0601790 | 0.803208 | 3.889282e-49 | -8.615850e-47 |
| Msa0355630 | Msa0601790 | -0.811076 | 8.389307e-51 | -8.615850e-47 |
| Msa0358750 | Msa0601790 | -0.805973 | 1.030804e-49 | -8.615850e-47 |
| Msa0364030 | Msa0601790 | -0.811218 | 7.814143e-51 | -8.615850e-47 |
| Msa0488580 | Msa0601790 | 0.817313 | 3.518621e-52 | -8.615850e-47 |
| Msa0492330 | Msa0601790 | -0.805275 | 1.444165e-49 | -8.615850e-47 |
| Msa0497680 | Msa0601790 | 0.825732 | 3.992174e-54 | -8.615850e-47 |
| Msa0497860 | Msa0601790 | 0.834195 | 3.449182e-56 | -8.615850e-47 |
| Msa0500910 | Msa0601790 | 0.820986 | 5.132615e-53 | -8.615850e-47 |
| Msa0505640 | Msa0601790 | 0.820397 | 7.009942e-53 | -8.615850e-47 |
| Msa0506370 | Msa0601790 | 0.828531 | 8.538398e-55 | -8.615850e-47 |
| Msa0508160 | Msa0601790 | 0.853315 | 2.591608e-61 | -8.615850e-47 |
| Msa0518190 | Msa0601790 | 0.803716 | 3.052287e-49 | -8.615850e-47 |
| Msa0521260 | Msa0601790 | -0.801063 | 1.074360e-48 | -8.615850e-47 |
| Msa0522170 | Msa0601790 | 0.808135 | 3.594275e-50 | -8.615850e-47 |
| Msa0532870 | Msa0601790 | -0.801151 | 1.030893e-48 | -8.615850e-47 |
| Msa0538050 | Msa0601790 | -0.802610 | 5.170242e-49 | -8.615850e-47 |
| Msa0547060 | Msa0601790 | 0.910986 | 1.012805e-82 | -8.615850e-47 |
| Msa0548420 | Msa0601790 | 0.803584 | 3.251631e-49 | -8.615850e-47 |
| Msa0550980 | Msa0601790 | -0.813653 | 2.295615e-51 | -8.615850e-47 |
| Msa0557440 | Msa0601790 | -0.819980 | 8.735013e-53 | -8.615850e-47 |
| Msa0560280 | Msa0601790 | 0.838115 | 3.483718e-57 | -8.615850e-47 |
| Msa0562580 | Msa0601790 | 0.819905 | 9.087017e-53 | -8.615850e-47 |
| Msa0565180 | Msa0601790 | 0.821100 | 4.830686e-53 | -8.615850e-47 |
| Msa0567190 | Msa0601790 | -0.809218 | 2.109698e-50 | -8.615850e-47 |
| Msa0572730 | Msa0601790 | -0.817755 | 2.796800e-52 | -8.615850e-47 |
| Msa0573950 | Msa0601790 | 0.821244 | 4.475818e-53 | -8.615850e-47 |
| Msa0580840 | Msa0601790 | 0.836559 | 8.716030e-57 | -8.615850e-47 |
| Msa0580890 | Msa0601790 | -0.817307 | 3.528876e-52 | -8.615850e-47 |
| Msa0582270 | Msa0601790 | -0.802331 | 5.900999e-49 | -8.615850e-47 |
| Msa0583270 | Msa0601790 | -0.822589 | 2.184476e-53 | -8.615850e-47 |
| Msa0601790 | Msa0606340 | -0.806189 | 9.281679e-50 | -8.615850e-47 |
| Msa0601790 | Msa0614290 | 0.838070 | 3.578116e-57 | -8.615850e-47 |
| Msa0601790 | Msa0615070 | 0.803672 | 3.116745e-49 | -8.615850e-47 |
| Msa0601790 | Msa0638810 | 0.826236 | 3.029710e-54 | -8.615850e-47 |
| Msa0601790 | Msa0638820 | 0.831858 | 1.315209e-55 | -8.615850e-47 |
| Msa0601790 | Msa0639530 | -0.825119 | 5.578332e-54 | -8.615850e-47 |
| Msa0601790 | Msa0642920 | 0.916527 | 1.599955e-85 | -8.615850e-47 |
| Msa0601790 | Msa0657340 | 0.824051 | 9.952292e-54 | -8.615850e-47 |
| Msa0601790 | Msa0660650 | 0.816473 | 5.429962e-52 | -8.615850e-47 |
| Msa0601790 | Msa0667670 | -0.821007 | 5.075048e-53 | -8.615850e-47 |
| Msa0601790 | Msa0672950 | 0.806722 | 7.164395e-50 | -8.615850e-47 |
| Msa0601790 | Msa0672980 | 0.811430 | 7.030300e-51 | -8.615850e-47 |
| Msa0601790 | Msa0690100 | -0.814149 | 1.784203e-51 | -8.615850e-47 |
| Msa0601790 | Msa0695140 | 0.807674 | 4.504570e-50 | -8.615850e-47 |
| Msa0601790 | Msa0695250 | -0.820778 | 5.730216e-53 | -8.615850e-47 |
| Msa0601790 | Msa0697510 | 0.838137 | 3.438482e-57 | -8.615850e-47 |
| Msa0601790 | Msa0697520 | 0.835206 | 1.920437e-56 | -8.615850e-47 |
| Msa0601790 | Msa0698110 | 0.816154 | 6.401602e-52 | -8.615850e-47 |
| Msa0601790 | Msa0699800 | 0.827657 | 1.386455e-54 | -8.615850e-47 |
| Msa0601790 | Msa0701430 | 0.804045 | 2.607778e-49 | -8.615850e-47 |
| Msa0601790 | Msa0713570 | -0.804729 | 1.878641e-49 | -8.615850e-47 |
| Msa0601790 | Msa0744540 | 0.819990 | 8.689728e-53 | -8.615850e-47 |
| Msa0601790 | Msa0744550 | 0.824383 | 8.315080e-54 | -8.615850e-47 |
| Msa0601790 | Msa0744560 | 0.826653 | 2.410238e-54 | -8.615850e-47 |
| Msa0601790 | Msa0793130 | -0.804370 | 2.232202e-49 | -8.615850e-47 |
| Msa0601790 | Msa0793270 | 0.823607 | 1.264554e-53 | -8.615850e-47 |
| Msa0601790 | Msa0794900 | -0.813295 | 2.751438e-51 | -8.615850e-47 |
| Msa0601790 | Msa0795320 | 0.843079 | 1.746600e-58 | -8.615850e-47 |
| Msa0601790 | Msa0816630 | 0.838458 | 2.841477e-57 | -8.615850e-47 |
| Msa0601790 | Msa0826360 | 0.807368 | 5.230139e-50 | -8.615850e-47 |
| Msa0601790 | Msa0826370 | 0.801874 | 7.329207e-49 | -8.615850e-47 |
| Msa0601790 | Msa0826380 | 0.807547 | 4.791471e-50 | -8.615850e-47 |
| Msa0601790 | Msa0826450 | 0.818600 | 1.801225e-52 | -8.615850e-47 |
| Msa0601790 | Msa0826820 | -0.812872 | 3.406270e-51 | -8.615850e-47 |
| Msa0601790 | Msa0829250 | -0.807735 | 4.371894e-50 | -8.615850e-47 |
| Msa0601790 | Msa0835050 | -0.806262 | 8.960684e-50 | -8.615850e-47 |
| Msa0601790 | Msa0863940 | 0.833198 | 6.119228e-56 | -8.615850e-47 |
| Msa0601790 | Msa0865500 | -0.801469 | 8.872510e-49 | -8.615850e-47 |
| Msa0601790 | Msa0865810 | 0.808778 | 2.620686e-50 | -8.615850e-47 |
| Msa0601790 | Msa0865820 | 0.804720 | 1.886748e-49 | -8.615850e-47 |
| Msa0601790 | Msa0865830 | 0.810269 | 1.253864e-50 | -8.615850e-47 |
| Msa0601790 | Msa0876790 | 0.811234 | 7.753424e-51 | -8.615850e-47 |
| Msa0601790 | Msa0888520 | -0.801478 | 8.835275e-49 | -8.615850e-47 |
| Msa0601790 | Msa0921790 | 0.815187 | 1.051469e-51 | -8.615850e-47 |
| Msa0601790 | Msa0934290 | -0.808146 | 3.574200e-50 | -8.615850e-47 |
| Msa0601790 | Msa0945160 | -0.814798 | 1.282617e-51 | -8.615850e-47 |
| Msa0601790 | Msa0947550 | -0.803101 | 4.092591e-49 | -8.615850e-47 |
| Msa0601790 | Msa0971780 | -0.808089 | 3.676043e-50 | -8.615850e-47 |
| Msa0601790 | Msa0975960 | 0.815117 | 1.089527e-51 | -8.615850e-47 |
| Msa0601790 | Msa0984230 | -0.807927 | 3.979190e-50 | -8.615850e-47 |
| Msa0601790 | Msa0984290 | 0.800641 | 1.309982e-48 | -8.615850e-47 |
| Msa0601790 | Msa1002550 | -0.801386 | 9.225742e-49 | -8.615850e-47 |
| Msa0601790 | Msa1016580 | -0.805278 | 1.442257e-49 | -8.615850e-47 |
| Msa0601790 | Msa1028660 | 0.805903 | 1.065986e-49 | -8.615850e-47 |
| Msa0601790 | Msa1031780 | 0.802775 | 4.780090e-49 | -8.615850e-47 |
| Msa0601790 | Msa1037360 | 0.822219 | 2.662496e-53 | -8.615850e-47 |
| Msa0601790 | Msa1041570 | -0.809085 | 2.252678e-50 | -8.615850e-47 |
| Msa0601790 | Msa1056590 | -0.807405 | 5.135923e-50 | -8.615850e-47 |
| Msa0601790 | Msa1062060 | 0.802885 | 4.536270e-49 | -8.615850e-47 |
| Msa0601790 | Msa1066770 | 0.815102 | 1.097979e-51 | -8.615850e-47 |
| Msa0601790 | Msa1067000 | 0.827689 | 1.361645e-54 | -8.615850e-47 |
| Msa0601790 | Msa1067800 | 0.804503 | 2.093872e-49 | -8.615850e-47 |
| Msa0601790 | Msa1078120 | -0.800157 | 1.643925e-48 | -8.615850e-47 |
| Msa0601790 | Msa1080820 | 0.818051 | 2.397937e-52 | -8.615850e-47 |
| Msa0601790 | Msa1088000 | -0.801054 | 1.078904e-48 | -8.615850e-47 |
| Msa0601790 | Msa1092770 | -0.807355 | 5.262616e-50 | -8.615850e-47 |
| Msa0601790 | Msa1102410 | -0.810577 | 1.075414e-50 | -8.615850e-47 |
| Msa0601790 | Msa1111860 | 0.820255 | 7.555987e-53 | -8.615850e-47 |
| Msa0601790 | Msa1112190 | 0.813517 | 2.459641e-51 | -8.615850e-47 |
| Msa0601790 | Msa1117770 | -0.817804 | 2.727356e-52 | -8.615850e-47 |
| Msa0601790 | Msa1118960 | 0.815576 | 8.614087e-52 | -8.615850e-47 |
| Msa0601790 | Msa1121300 | 0.800285 | 1.548081e-48 | -8.615850e-47 |
| Msa0601790 | Msa1121720 | -0.837031 | 6.606058e-57 | -8.615850e-47 |
| Msa0601790 | Msa1123000 | 0.810457 | 1.141953e-50 | -8.615850e-47 |
| Msa0601790 | Msa1130150 | -0.815005 | 1.153647e-51 | -8.615850e-47 |
| Msa0601790 | Msa1130850 | -0.813228 | 2.846932e-51 | -8.615850e-47 |
| Msa0601790 | Msa1130910 | -0.804892 | 1.737000e-49 | -8.615850e-47 |
| Msa0601790 | Msa1154240 | 0.804983 | 1.662019e-49 | -8.615850e-47 |
| Msa0601790 | Msa1156120 | -0.811928 | 5.478389e-51 | -8.615850e-47 |
| Msa0601790 | Msa1157200 | 0.812353 | 4.425653e-51 | -8.615850e-47 |
| Msa0601790 | Msa1166470 | -0.813092 | 3.049418e-51 | -8.615850e-47 |
| Msa0601790 | Msa1173150 | 0.811825 | 5.768905e-51 | -8.615850e-47 |
| Msa0601790 | Msa1174280 | 0.836623 | 8.397490e-57 | -8.615850e-47 |
| Msa0601790 | Msa1177650 | 0.816689 | 4.858456e-52 | -8.615850e-47 |
| Msa0601790 | Msa1184100 | -0.809265 | 2.060675e-50 | -8.615850e-47 |
| Msa0601790 | Msa1185270 | 0.820037 | 8.475263e-53 | -8.615850e-47 |
| Msa0601790 | Msa1199870 | 0.814568 | 1.441603e-51 | -8.615850e-47 |
| Msa0601790 | Msa1202110 | 0.824419 | 8.157124e-54 | -8.615850e-47 |
| Msa0601790 | Msa1202470 | 0.818484 | 1.914027e-52 | -8.615850e-47 |
| Msa0601790 | Msa1211610 | 0.838969 | 2.096626e-57 | -8.615850e-47 |
| Msa0601790 | Msa1212150 | -0.806496 | 7.997508e-50 | -8.615850e-47 |
| Msa0601790 | Msa1217260 | 0.850777 | 1.363920e-60 | -8.615850e-47 |
| Msa0601790 | Msa1221220 | 0.803115 | 4.066216e-49 | -8.615850e-47 |
| Msa0601790 | Msa1228260 | -0.820647 | 6.142015e-53 | -8.615850e-47 |
| Msa0601790 | Msa1236120 | -0.821398 | 4.123809e-53 | -8.615850e-47 |
| Msa0601790 | Msa1236190 | -0.836021 | 1.194478e-56 | -8.615850e-47 |
| Msa0601790 | Msa1239190 | 0.810368 | 1.193509e-50 | -8.615850e-47 |
| Msa0601790 | Msa1239210 | 0.823353 | 1.450096e-53 | -8.615850e-47 |
| Msa0601790 | Msa1241770 | 0.812499 | 4.111515e-51 | -8.615850e-47 |
| Msa0601790 | Msa1254870 | 0.824625 | 7.293454e-54 | -8.615850e-47 |
| Msa0601790 | Msa1254910 | 0.805319 | 1.413453e-49 | -8.615850e-47 |
| Msa0601790 | Msa1262540 | 0.817234 | 3.666186e-52 | -8.615850e-47 |
| Msa0601790 | Msa1271220 | -0.823256 | 1.527780e-53 | -8.615850e-47 |
| Msa0601790 | Msa1277270 | -0.806185 | 9.298884e-50 | -8.615850e-47 |
| Msa0601790 | Msa1279060 | 0.838313 | 3.097534e-57 | -8.615850e-47 |
| Msa0601790 | Msa1299480 | 0.841540 | 4.466778e-58 | -8.615850e-47 |
| Msa0601790 | Msa1302340 | 0.820115 | 8.132300e-53 | -8.615850e-47 |
| Msa0601790 | Msa1303620 | -0.808566 | 2.907858e-50 | -8.615850e-47 |
| Msa0601790 | Msa1308430 | -0.822400 | 2.417753e-53 | -8.615850e-47 |
| Msa0601790 | Msa1315880 | -0.825241 | 5.219288e-54 | -8.615850e-47 |
| Msa0601790 | Msa1317740 | 0.808475 | 3.041509e-50 | -8.615850e-47 |
| Msa0601790 | Msa1322180 | 0.802865 | 4.579518e-49 | -8.615850e-47 |
| Msa0601790 | Msa1328430 | 0.824065 | 9.874071e-54 | -8.615850e-47 |
| Msa0601790 | Msa1330400 | 0.803494 | 3.394467e-49 | -8.615850e-47 |
| Msa0601790 | Msa1341710 | -0.816871 | 4.422383e-52 | -8.615850e-47 |
| Msa0601790 | Msa1341850 | -0.819130 | 1.364892e-52 | -8.615850e-47 |
| Msa0601790 | Msa1342360 | -0.811132 | 8.158836e-51 | -8.615850e-47 |
| Msa0601790 | Msa1348180 | -0.802602 | 5.189034e-49 | -8.615850e-47 |
| Msa0601790 | Msa1349830 | 0.821177 | 4.636919e-53 | -8.615850e-47 |
| Msa0601790 | Msa1350590 | -0.837501 | 5.008511e-57 | -8.615850e-47 |
| Msa0601790 | Msa1356100 | -0.837947 | 3.848671e-57 | -8.615850e-47 |
| Msa0601790 | Msa1357570 | 0.827719 | 1.339582e-54 | -8.615850e-47 |
| Msa0601790 | Msa1366480 | 0.815390 | 9.476892e-52 | -8.615850e-47 |
| Msa0601790 | Msa1371540 | -0.807945 | 3.944597e-50 | -8.615850e-47 |
| Msa0601790 | Msa1372460 | -0.817590 | 3.047849e-52 | -8.615850e-47 |
| Msa0601790 | Msa1372470 | -0.804682 | 1.921669e-49 | -8.615850e-47 |
| Msa0601790 | Msa1373310 | -0.805702 | 1.175203e-49 | -8.615850e-47 |
| Msa0601790 | Msa1373420 | -0.804881 | 1.745535e-49 | -8.615850e-47 |
| Msa0601790 | Msa1375890 | 0.806647 | 7.429849e-50 | -8.615850e-47 |
| Msa0601790 | Msa1377980 | -0.825242 | 5.215671e-54 | -8.615850e-47 |
| Msa0601790 | Msa1386910 | -0.806123 | 9.584412e-50 | -8.615850e-47 |
| Msa0601790 | Msa1387610 | 0.806854 | 6.720584e-50 | -8.615850e-47 |
| Msa0601790 | Msa1395380 | -0.820691 | 5.998904e-53 | -8.615850e-47 |
| Msa0601790 | Msa1398120 | 0.833974 | 3.916957e-56 | -8.615850e-47 |
| Msa0601790 | Msa1398320 | 0.815041 | 1.132672e-51 | -8.615850e-47 |
| Msa0601790 | Msa1401110 | 0.813536 | 2.435641e-51 | -8.615850e-47 |
| Msa0601790 | Msa1403690 | 0.806396 | 8.394932e-50 | -8.615850e-47 |
| Msa0601790 | Msa1408230 | -0.820233 | 7.642633e-53 | -8.615850e-47 |
| Msa0601790 | Msa1408280 | -0.825176 | 5.407089e-54 | -8.615850e-47 |
| Msa0601790 | Msa1410480 | -0.810075 | 1.380290e-50 | -8.615850e-47 |
| Msa0601790 | Msa1410500 | -0.822930 | 1.820108e-53 | -8.615850e-47 |
| Msa0601790 | Msa1411370 | 0.801482 | 8.819427e-49 | -8.615850e-47 |
| Msa0601790 | Msa1412410 | 0.818844 | 1.585757e-52 | -8.615850e-47 |
| Msa0601790 | Msa1415510 | -0.819945 | 8.894623e-53 | -8.615850e-47 |
| Msa0601790 | Msa1420540 | 0.808183 | 3.509866e-50 | -8.615850e-47 |
| Msa0601790 | Msa1424490 | -0.808916 | 2.448527e-50 | -8.615850e-47 |
| Msa0601790 | Msa1427860 | 0.820605 | 6.278496e-53 | -8.615850e-47 |
| Msa0601790 | Msa1434860 | -0.822047 | 2.918432e-53 | -8.615850e-47 |
| Msa0601790 | Msa1435320 | 0.807736 | 4.370459e-50 | -8.615850e-47 |
| Msa0601790 | Msa1439860 | 0.804656 | 1.945683e-49 | -8.615850e-47 |
| Msa0601790 | Msa1443400 | 0.805098 | 1.572952e-49 | -8.615850e-47 |
| Msa0601790 | Msa1444130 | -0.813464 | 2.525515e-51 | -8.615850e-47 |
| Msa0601790 | Msa1444690 | -0.815229 | 1.028758e-51 | -8.615850e-47 |
| Msa0601790 | Msa1448040 | 0.805227 | 1.477609e-49 | -8.615850e-47 |
| Msa0601790 | Msa1449470 | 0.800256 | 1.569821e-48 | -8.615850e-47 |
| Msa0601790 | Msa1453600 | 0.811840 | 5.725121e-51 | -8.615850e-47 |
| Msa0601790 | Msa1454300 | -0.821312 | 4.318260e-53 | -8.615850e-47 |
| Msa0601790 | Msa1459130 | -0.801332 | 9.467017e-49 | -8.615850e-47 |
| Msa0601790 | Msa1459920 | 0.805251 | 1.461066e-49 | -8.615850e-47 |
| Msa0601790 | Msa1461840 | -0.808238 | 3.417284e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601790 | MtrunA17_Chr4g0028881 | 98.932 | 936 | 10 | 0 | 1 | 936 | 1 | 936 | 0.0 | 1936 |
| Msa0601790 | MtrunA17_Chr8g0345071 | 27.492 | 331 | 190 | 10 | 592 | 888 | 52 | 366 | 2.46e-29 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0601790 | AT5G60700.2 | 80.298 | 939 | 175 | 4 | 1 | 936 | 1 | 932 | 0.0 | 1573 |
| Msa0601790 | AT5G60700.1 | 86.078 | 668 | 93 | 0 | 269 | 936 | 1 | 668 | 0.0 | 1216 |
| Msa0601790 | AT5G12260.1 | 30.597 | 268 | 147 | 10 | 605 | 846 | 73 | 327 | 1.95e-27 | 119 |
Find 159 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGGTTTGGAAAATT+TGG | 0.065005 | 4_2:-44811351 | None:intergenic |
| CCCCATGTTTCTTTGTCTTT+TGG | 0.116342 | 4_2:-44809672 | None:intergenic |
| AAAGAAAATGTTGGAGATTT+TGG | 0.133809 | 4_2:+44808114 | Msa0601790:CDS |
| TTAGGTGTTGGTTCAATTTC+CGG | 0.192943 | 4_2:+44810032 | Msa0601790:CDS |
| CAACCATTTGTTCTTGATTT+CGG | 0.225293 | 4_2:-44811264 | None:intergenic |
| TTGACAACTTCAACAATTCT+TGG | 0.227499 | 4_2:-44811063 | None:intergenic |
| TAAAACTCTCTCCAATGTTT+AGG | 0.235717 | 4_2:-44811186 | None:intergenic |
| ATTGGTTATTATTGTCTTCT+TGG | 0.248745 | 4_2:-44807601 | None:intergenic |
| CGGTTTAAGATCTTTGATTT+AGG | 0.258525 | 4_2:+44810014 | Msa0601790:CDS |
| AGGGAGATGGAAGAGAGTTC+TGG | 0.270847 | 4_2:-44811033 | None:intergenic |
| TTAGTGAATTTACCCTGTTT+TGG | 0.274450 | 4_2:-44810696 | None:intergenic |
| CTCTTGAGCGACGCCTCGTT+TGG | 0.276412 | 4_2:-44807953 | None:intergenic |
| CAATCAAGCTGTTTCTCTTA+AGG | 0.280030 | 4_2:+44811542 | Msa0601790:CDS |
| TGTGGTTAAGCATAATAAAA+TGG | 0.289497 | 4_2:+44811425 | Msa0601790:CDS |
| AAAGTATAAGAATTCTGTTT+TGG | 0.290647 | 4_2:+44808156 | Msa0601790:CDS |
| GAATTGTTGTTGCTTGAAAT+TGG | 0.292598 | 4_2:-44807619 | None:intergenic |
| AAGTTTGGGTGCTTTCTTTC+GGG | 0.297498 | 4_2:+44807927 | Msa0601790:CDS |
| CAAGTTTGGGTGCTTTCTTT+CGG | 0.298260 | 4_2:+44807926 | Msa0601790:CDS |
| CTACTGTGTCTAAAGTTCTT+TGG | 0.304413 | 4_2:+44810237 | Msa0601790:CDS |
| GAATACACTGCTTGTATAAC+TGG | 0.310239 | 4_2:-44810074 | None:intergenic |
| CAACAATTCTTGGTGTGTAT+AGG | 0.312888 | 4_2:-44811053 | None:intergenic |
| TCACCAGTTGAGAAGGTAAA+AGG | 0.315759 | 4_2:-44808379 | None:intergenic |
| CAGATCAACAGTTGGCAAAA+AGG | 0.316102 | 4_2:+44809902 | Msa0601790:CDS |
| AACAATTCTTGGTGTGTATA+GGG | 0.318766 | 4_2:-44811052 | None:intergenic |
| AATCAAGCTGTTTCTCTTAA+GGG | 0.319362 | 4_2:+44811543 | Msa0601790:CDS |
| TAGGTGTTGGTTCAATTTCC+GGG | 0.324598 | 4_2:+44810033 | Msa0601790:CDS |
| TTTGCAGACAGAAGCTGATT+TGG | 0.331055 | 4_2:+44808060 | Msa0601790:CDS |
| AAAACTCTCTCCAATGTTTA+GGG | 0.348787 | 4_2:-44811185 | None:intergenic |
| CTTGATTTCGGAATTTGAAC+CGG | 0.360455 | 4_2:-44811252 | None:intergenic |
| TTCATCAATTACCTTGTAGT+TGG | 0.366831 | 4_2:+44811148 | Msa0601790:CDS |
| TCATCAATTACCTTGTAGTT+GGG | 0.371809 | 4_2:+44811149 | Msa0601790:CDS |
| GGGAGATGGAAGAGAGTTCT+GGG | 0.371894 | 4_2:-44811032 | None:intergenic |
| GACTTAAATTTCCTATAACT+TGG | 0.376357 | 4_2:-44808226 | None:intergenic |
| TTGATCCATAGGTAGTAATA+AGG | 0.377040 | 4_2:-44810967 | None:intergenic |
| CAAATGGTTGGCAAGCTTCA+TGG | 0.386635 | 4_2:+44811277 | Msa0601790:CDS |
| CTATCCATGTTGAAAGTGAT+TGG | 0.388496 | 4_2:-44810769 | None:intergenic |
| TGTGCAATTCTTGAGAAATC+TGG | 0.389282 | 4_2:-44807509 | None:intergenic |
| AAGATCTTTGATTTAGGTGT+TGG | 0.391823 | 4_2:+44810020 | Msa0601790:CDS |
| TCAACATCATAACCCAAAAC+AGG | 0.393205 | 4_2:+44810683 | Msa0601790:CDS |
| TATTCTGTCGCATTCCATTT+CGG | 0.393945 | 4_2:-44811093 | None:intergenic |
| AACTAGTAGGTTCATTTGAA+TGG | 0.395582 | 4_2:+44810815 | Msa0601790:CDS |
| TGGACCTTTCAAATCCCATT+TGG | 0.397443 | 4_2:-44807801 | None:intergenic |
| TGATGAAGGTAAGGTGTGTT+TGG | 0.414604 | 4_2:-44811132 | None:intergenic |
| TTTATCAATAGTGATATCAT+AGG | 0.415176 | 4_2:-44808281 | None:intergenic |
| CCATCTTCAGATGACAACTT+TGG | 0.415502 | 4_2:+44810913 | Msa0601790:CDS |
| CACTGTTGTTTCTGATACAT+AGG | 0.416197 | 4_2:-44809715 | None:intergenic |
| GAGAAACAGCTTGATTGAAA+AGG | 0.419242 | 4_2:-44811536 | None:intergenic |
| AATTCTTGAGAAATCTGGTT+TGG | 0.422536 | 4_2:-44807504 | None:intergenic |
| CTACATTGGTTCTTCTGCCT+AGG | 0.425024 | 4_2:+44810213 | Msa0601790:CDS |
| TAAAGCTGCTGGTGCTAAGT+TGG | 0.428332 | 4_2:+44811569 | Msa0601790:CDS |
| AGCAGTGTATTCTAGTTTGA+AGG | 0.435732 | 4_2:+44810085 | Msa0601790:CDS |
| TAATGAACATGAAATCCAAA+TGG | 0.437665 | 4_2:+44807786 | Msa0601790:CDS |
| AAGGCCTATATTGTTGTCTC+TGG | 0.442579 | 4_2:+44809921 | Msa0601790:CDS |
| GGCGAGAAGTGGAGATTCCT+TGG | 0.445610 | 4_2:+44807322 | Msa0601790:CDS |
| TCTCACCTTATTACTACCTA+TGG | 0.445983 | 4_2:+44810962 | Msa0601790:CDS |
| AATTTCATCTCCTAGATAGT+AGG | 0.446568 | 4_2:-44810746 | None:intergenic |
| GAGAAACTTGAGGGTCATAA+TGG | 0.449253 | 4_2:-44811008 | None:intergenic |
| CTCACCAATGCCTACTATCT+AGG | 0.449528 | 4_2:+44810736 | Msa0601790:CDS |
| ATTGATATGATGTATTTAAG+AGG | 0.454107 | 4_2:+44811312 | Msa0601790:CDS |
| GCTTCAGAAACTAATTCAAA+TGG | 0.454950 | 4_2:+44810188 | Msa0601790:CDS |
| AGCACCCAAACTTGATGAAA+AGG | 0.455138 | 4_2:-44807917 | None:intergenic |
| GATATTGCCATTTAGACAAA+AGG | 0.460055 | 4_2:+44808192 | Msa0601790:CDS |
| ATGATCACACCACACATTGT+AGG | 0.461395 | 4_2:+44807548 | Msa0601790:CDS |
| TTGGTTCTTAAATCAATTGA+AGG | 0.462460 | 4_2:-44807485 | None:intergenic |
| CACTATTGATAAAATTGTGC+AGG | 0.462476 | 4_2:+44808291 | Msa0601790:CDS |
| AATTTCCAAAACAAAACCAT+TGG | 0.462676 | 4_2:+44807743 | Msa0601790:CDS |
| ATTCCGAAATCAAGAACAAA+TGG | 0.465756 | 4_2:+44811261 | Msa0601790:CDS |
| AAAGTGAAACCTCATAAAAC+AGG | 0.469207 | 4_2:+44807380 | Msa0601790:CDS |
| AAGCTGCAGCAGCTCTCAAA+TGG | 0.469839 | 4_2:+44809967 | Msa0601790:CDS |
| GTTGCTGTTGATCATCATAC+TGG | 0.470551 | 4_2:+44811630 | Msa0601790:CDS |
| TTGAAGTGTCTCAGTTCCAA+TGG | 0.470919 | 4_2:-44807759 | None:intergenic |
| AAATTTAAGTCTAAAGAAGC+TGG | 0.471279 | 4_2:+44808238 | Msa0601790:CDS |
| AAAGAGAGAGCTTTATGAAG+AGG | 0.472811 | 4_2:+44807715 | Msa0601790:CDS |
| TGTGAGAAAGGCTTTGAAGA+TGG | 0.472901 | 4_2:+44810166 | Msa0601790:CDS |
| AAAGCTGCTGGTGCTAAGTT+GGG | 0.474235 | 4_2:+44811570 | Msa0601790:CDS |
| ATGTTGAATGACTATGTTGC+TGG | 0.474502 | 4_2:+44807350 | Msa0601790:CDS |
| TGGTGGAAAGCACTTTCATC+TGG | 0.474973 | 4_2:+44809774 | Msa0601790:CDS |
| GTACTATGGAAGGTTTCAAA+TGG | 0.475657 | 4_2:+44808036 | Msa0601790:CDS |
| CTTCAAAAGTATAGAAATGC+AGG | 0.477205 | 4_2:+44809627 | Msa0601790:CDS |
| GTGATATCATAGGCAGGATC+AGG | 0.479851 | 4_2:-44808271 | None:intergenic |
| GAAGGTAAGGTGTGTTTGGA+TGG | 0.481855 | 4_2:-44811128 | None:intergenic |
| TGAGTGAAGATGCAGCTTCT+TGG | 0.482305 | 4_2:-44807577 | None:intergenic |
| AGCTCTCAAATGGCCTCTGT+TGG | 0.483154 | 4_2:+44809977 | Msa0601790:CDS |
| TTGTCAAAGAAAGACCGAAA+TGG | 0.487112 | 4_2:+44811079 | Msa0601790:CDS |
| GCCTATATTGTTGTCTCTGG+TGG | 0.489287 | 4_2:+44809924 | Msa0601790:CDS |
| CTTAAGGGACTTAAAGCTGC+TGG | 0.489733 | 4_2:+44811558 | Msa0601790:CDS |
| GAAGCAACCATAAAACTAGT+AGG | 0.492724 | 4_2:+44810802 | Msa0601790:CDS |
| CAAGGTAATTGATGAAGGTA+AGG | 0.495150 | 4_2:-44811141 | None:intergenic |
| TCCACAGTAATAACAACACT+TGG | 0.500700 | 4_2:-44810128 | None:intergenic |
| TGAGTGCATATTTGATCCAT+AGG | 0.502316 | 4_2:-44810978 | None:intergenic |
| AATGAACATGAAATCCAAAT+GGG | 0.502594 | 4_2:+44807787 | Msa0601790:CDS |
| TTCAAGTACGCGATGATCAA+TGG | 0.502893 | 4_2:+44809754 | Msa0601790:CDS |
| CTGGTGAAGATTTGCACCTC+AGG | 0.503101 | 4_2:+44808395 | Msa0601790:CDS |
| TCCACCAGAGACAACAATAT+AGG | 0.504295 | 4_2:-44809925 | None:intergenic |
| ATCTGGCTACATAACACAAT+GGG | 0.506007 | 4_2:+44809791 | Msa0601790:CDS |
| CGAAATTCGACGGCGAGAAG+TGG | 0.506078 | 4_2:+44807311 | Msa0601790:CDS |
| CCAAAGTTGTCATCTGAAGA+TGG | 0.511797 | 4_2:-44810913 | None:intergenic |
| CATCAATTACCTTGTAGTTG+GGG | 0.519801 | 4_2:+44811150 | Msa0601790:CDS |
| TCATTCTCACAAACAAGAGA+TGG | 0.521795 | 4_2:-44807641 | None:intergenic |
| GGTTCATTTGAATGGCCTCA+TGG | 0.527161 | 4_2:+44810823 | Msa0601790:CDS |
| TGCTGGTGCTAAGTTGGGAC+AGG | 0.530192 | 4_2:+44811575 | Msa0601790:CDS |
| TACATTGGTTCTTCTGCCTA+GGG | 0.532112 | 4_2:+44810214 | Msa0601790:CDS |
| AACTACAAGGTAATTGATGA+AGG | 0.532933 | 4_2:-44811146 | None:intergenic |
| ATCTCCTAGATAGTAGGCAT+TGG | 0.534319 | 4_2:-44810740 | None:intergenic |
| CTAAAATCATCCTTCAACAA+TGG | 0.535382 | 4_2:-44811459 | None:intergenic |
| GCAGTGTATTCTAGTTTGAA+GGG | 0.542949 | 4_2:+44810086 | Msa0601790:CDS |
| TTGATTTCGGAATTTGAACC+GGG | 0.544807 | 4_2:-44811251 | None:intergenic |
| TATGTGCACCTGGTTCCATA+TGG | 0.547518 | 4_2:-44811386 | None:intergenic |
| TATTGATGTTAATGTGAGAA+AGG | 0.547988 | 4_2:+44810154 | Msa0601790:CDS |
| GCTGCTGCAGCTTGTTCACA+AGG | 0.548041 | 4_2:-44809957 | None:intergenic |
| CTGCTCTTATGAGTCCACCT+TGG | 0.549152 | 4_2:-44810873 | None:intergenic |
| CAAATCTTCACCAGTTGAGA+AGG | 0.549226 | 4_2:-44808386 | None:intergenic |
| TAAGAGCAGTAAGTGAAAGT+TGG | 0.549354 | 4_2:+44810887 | Msa0601790:CDS |
| GATGGTAATCTTGAAGCTGA+AGG | 0.550276 | 4_2:-44811507 | None:intergenic |
| TCTCAAGAATTGCACAACAA+TGG | 0.551342 | 4_2:+44807516 | Msa0601790:CDS |
| TGTGTCTAAAGTTCTTTGGA+TGG | 0.551940 | 4_2:+44810241 | Msa0601790:CDS |
| TCTTGGTGTGTATAGGGAGA+TGG | 0.554912 | 4_2:-44811046 | None:intergenic |
| GTCATTCAACATTCCATCCA+AGG | 0.556417 | 4_2:-44807339 | None:intergenic |
| GTTCTGGGAGAGAAACTTGA+GGG | 0.559430 | 4_2:-44811017 | None:intergenic |
| AACACTGCTCCCCAACTACA+AGG | 0.561032 | 4_2:-44811159 | None:intergenic |
| TTGATATGATGTATTTAAGA+GGG | 0.562184 | 4_2:+44811313 | Msa0601790:CDS |
| TCCAAAAGACAAAGAAACAT+GGG | 0.566745 | 4_2:+44809671 | Msa0601790:CDS |
| TGATTGAAAAGGTTCAAAGA+TGG | 0.566992 | 4_2:-44811525 | None:intergenic |
| AGAAGTGGAGATTCCTTGGA+TGG | 0.567533 | 4_2:+44807326 | Msa0601790:CDS |
| GATACCTGGAAAGAAAATGT+TGG | 0.567656 | 4_2:+44808105 | Msa0601790:CDS |
| TAATTCAAATGGAACTACAT+TGG | 0.567955 | 4_2:+44810199 | Msa0601790:CDS |
| TCAATAGTGATATCATAGGC+AGG | 0.570472 | 4_2:-44808277 | None:intergenic |
| CGAAATCAAGAACAAATGGT+TGG | 0.570974 | 4_2:+44811265 | Msa0601790:CDS |
| AAATCCAAATGGGATTTGAA+AGG | 0.575214 | 4_2:+44807797 | Msa0601790:CDS |
| GTTGATGATGATATGATACC+TGG | 0.577017 | 4_2:+44808091 | Msa0601790:CDS |
| TGGAAAGCTATAACGATTCG+CGG | 0.583596 | 4_2:+44807981 | Msa0601790:CDS |
| CCAAACTTGATGAAAAGGTA+GGG | 0.586043 | 4_2:-44807912 | None:intergenic |
| TTCTTTCGGGAGTCCAAACG+AGG | 0.586582 | 4_2:+44807940 | Msa0601790:CDS |
| TCAACTAACCATATGGAACC+AGG | 0.589500 | 4_2:+44811378 | Msa0601790:CDS |
| TTTATGTTTACATGAACATG+AGG | 0.594622 | 4_2:+44811205 | Msa0601790:CDS |
| CCCAAACTTGATGAAAAGGT+AGG | 0.596316 | 4_2:-44807913 | None:intergenic |
| AATTCCAATCACTTTCAACA+TGG | 0.597469 | 4_2:+44810765 | Msa0601790:CDS |
| ACTTTAGACACAGTAGCCCT+AGG | 0.599528 | 4_2:-44810230 | None:intergenic |
| AGTTCTGGGAGAGAAACTTG+AGG | 0.603063 | 4_2:-44811018 | None:intergenic |
| ATCCAAAAGACAAAGAAACA+TGG | 0.611454 | 4_2:+44809670 | Msa0601790:CDS |
| TGTTGGTTTGCAAAGAACGT+CGG | 0.611758 | 4_2:+44809994 | Msa0601790:CDS |
| CAGAATCTTGAGCAGTGATG+AGG | 0.612938 | 4_2:-44811657 | None:intergenic |
| TTAGCACTAATATGTGCACC+TGG | 0.615984 | 4_2:-44811396 | None:intergenic |
| TGCCTCAGAGTTCGACACCC+CGG | 0.617245 | 4_2:-44810051 | None:intergenic |
| CGTTCTTTGCAAACCAACAG+AGG | 0.619954 | 4_2:-44809990 | None:intergenic |
| TGGTAATGTCCTACAATGTG+TGG | 0.620729 | 4_2:-44807557 | None:intergenic |
| AGGTGTTGGTTCAATTTCCG+GGG | 0.621941 | 4_2:+44810034 | Msa0601790:CDS |
| TATTAGTGCTAAAGATAATG+TGG | 0.629617 | 4_2:+44811407 | Msa0601790:CDS |
| CATCTGGCTACATAACACAA+TGG | 0.632893 | 4_2:+44809790 | Msa0601790:CDS |
| CAACATCATAACCCAAAACA+GGG | 0.633195 | 4_2:+44810684 | Msa0601790:CDS |
| CCCAAGTGTTGTTATTACTG+TGG | 0.644602 | 4_2:+44810127 | Msa0601790:CDS |
| CTAAGAAGAAGAATCATCCA+AGG | 0.647301 | 4_2:+44810856 | Msa0601790:CDS |
| AAGTACGCGATGATCAATGG+TGG | 0.648183 | 4_2:+44809757 | Msa0601790:CDS |
| CCACAGTAATAACAACACTT+GGG | 0.662921 | 4_2:-44810127 | None:intergenic |
| GGCGTCGCTCAAGAGAATCG+TGG | 0.675128 | 4_2:+44807961 | Msa0601790:CDS |
| AGAAGAAGAATCATCCAAGG+TGG | 0.677908 | 4_2:+44810859 | Msa0601790:CDS |
| TTCCGGGGTGTCGAACTCTG+AGG | 0.689190 | 4_2:+44810049 | Msa0601790:CDS |
| CCAAAAGACAAAGAAACATG+GGG | 0.703653 | 4_2:+44809672 | Msa0601790:CDS |
| CATGAACATGAGGTTCACTG+AGG | 0.734642 | 4_2:+44811215 | Msa0601790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAAAATAAAATTAT+GGG | - | chr4_2:44808559-44808578 | None:intergenic | 0.0% |
| !! | AAAATATTAGTATCATAAAA+TGG | - | chr4_2:44808473-44808492 | None:intergenic | 10.0% |
| !! | TATATAAAATAAAATTATGG+GGG | - | chr4_2:44808557-44808576 | None:intergenic | 10.0% |
| !!! | AGATTTTCTATATTAAAATA+AGG | - | chr4_2:44809045-44809064 | None:intergenic | 10.0% |
| !! | TCATAAAATAAAATTGCATA+TGG | - | chr4_2:44808582-44808601 | None:intergenic | 15.0% |
| !!! | TACATAAATGACATTTTTTT+TGG | - | chr4_2:44808626-44808645 | None:intergenic | 15.0% |
| !! | AAAAAATAGTAAGTTTGTAT+CGG | - | chr4_2:44808947-44808966 | None:intergenic | 15.0% |
| !! | TTTATTCAAATTTCATATGA+AGG | + | chr4_2:44809317-44809336 | Msa0601790:intron | 15.0% |
| !!! | TAATAATTTTTTACATGTGT+TGG | + | chr4_2:44809510-44809529 | Msa0601790:intron | 15.0% |
| !!! | TAGATTAGATAATTGATAAT+GGG | + | chr4_2:44810339-44810358 | Msa0601790:intron | 15.0% |
| !!! | AACATTTTTATTGTACTACA+TGG | + | chr4_2:44807460-44807479 | Msa0601790:CDS | 20.0% |
| !!! | ACATTTTTATTGTACTACAT+GGG | + | chr4_2:44807461-44807480 | Msa0601790:CDS | 20.0% |
| !!! | TTCAACAAAACATTGATTTT+CGG | - | chr4_2:44807839-44807858 | None:intergenic | 20.0% |
| !!! | AAAGTATAAGAATTCTGTTT+TGG | + | chr4_2:44808156-44808175 | Msa0601790:CDS | 20.0% |
| !!! | AAGTATAAGAATTCTGTTTT+GGG | + | chr4_2:44808157-44808176 | Msa0601790:CDS | 20.0% |
| !!! | ATTTTACTTTTCCAAGTTAT+AGG | + | chr4_2:44808215-44808234 | Msa0601790:CDS | 20.0% |
| !! | TTTATCAATAGTGATATCAT+AGG | - | chr4_2:44808284-44808303 | None:intergenic | 20.0% |
| !!! | TTTGATTTTTATTATGCCAT+AGG | + | chr4_2:44808518-44808537 | Msa0601790:intron | 20.0% |
| !! | TAACATGTAAAAATTTCATG+TGG | + | chr4_2:44809009-44809028 | Msa0601790:intron | 20.0% |
| !! | TTTCACTAAATTAAAGTAAG+TGG | - | chr4_2:44809088-44809107 | None:intergenic | 20.0% |
| !! | GCAATAATAAAAATAAGAGT+TGG | - | chr4_2:44809378-44809397 | None:intergenic | 20.0% |
| !!! | TAATAGTTTGAAATTGTTTG+CGG | - | chr4_2:44809439-44809458 | None:intergenic | 20.0% |
| !! | CACATGTAAAAAATTATTAC+TGG | - | chr4_2:44809509-44809528 | None:intergenic | 20.0% |
| !! | AAAAAATAGACTTTCTTACT+TGG | - | chr4_2:44810290-44810309 | None:intergenic | 20.0% |
| !! | AAAGAAATTGCAATTTAGAA+GGG | - | chr4_2:44810313-44810332 | None:intergenic | 20.0% |
| !! | AAAAGAAATTGCAATTTAGA+AGG | - | chr4_2:44810314-44810333 | None:intergenic | 20.0% |
| !! | CTAGATTAGATAATTGATAA+TGG | + | chr4_2:44810338-44810357 | Msa0601790:intron | 20.0% |
| !! | TAAAATATTGTCACATTTGT+TGG | - | chr4_2:44810511-44810530 | None:intergenic | 20.0% |
| !! | ATTGATATGATGTATTTAAG+AGG | + | chr4_2:44811312-44811331 | Msa0601790:CDS | 20.0% |
| !! | TTGATATGATGTATTTAAGA+GGG | + | chr4_2:44811313-44811332 | Msa0601790:CDS | 20.0% |
| !! | TTGGTTCTTAAATCAATTGA+AGG | - | chr4_2:44807488-44807507 | None:intergenic | 25.0% |
| ! | ATTGGTTATTATTGTCTTCT+TGG | - | chr4_2:44807604-44807623 | None:intergenic | 25.0% |
| ! | AATTTCCAAAACAAAACCAT+TGG | + | chr4_2:44807743-44807762 | Msa0601790:CDS | 25.0% |
| ! | TAATGAACATGAAATCCAAA+TGG | + | chr4_2:44807786-44807805 | Msa0601790:CDS | 25.0% |
| ! | AATGAACATGAAATCCAAAT+GGG | + | chr4_2:44807787-44807806 | Msa0601790:CDS | 25.0% |
| !!! | AGTTACGATTTTAAGTACTA+TGG | + | chr4_2:44808022-44808041 | Msa0601790:CDS | 25.0% |
| !! | AAAGAAAATGTTGGAGATTT+TGG | + | chr4_2:44808114-44808133 | Msa0601790:CDS | 25.0% |
| !! | GTAAAATCCTTTTGTCTAAA+TGG | - | chr4_2:44808202-44808221 | None:intergenic | 25.0% |
| ! | GACTTAAATTTCCTATAACT+TGG | - | chr4_2:44808229-44808248 | None:intergenic | 25.0% |
| ! | AAATTTAAGTCTAAAGAAGC+TGG | + | chr4_2:44808238-44808257 | Msa0601790:CDS | 25.0% |
| !!! | TTGATTTTCTTTCAAGTTCT+TGG | + | chr4_2:44808314-44808333 | Msa0601790:CDS | 25.0% |
| ! | TGACAAAAGGTCAAATATAA+AGG | + | chr4_2:44808647-44808666 | Msa0601790:intron | 25.0% |
| ! | GACAAAAGGTCAAATATAAA+GGG | + | chr4_2:44808648-44808667 | Msa0601790:intron | 25.0% |
| ! | AAATAAGTCATTGTTTGACT+TGG | - | chr4_2:44809153-44809172 | None:intergenic | 25.0% |
| ! | AAGTCAAACAATGACTTATT+TGG | + | chr4_2:44809152-44809171 | Msa0601790:intron | 25.0% |
| ! | TATTGATGTTAATGTGAGAA+AGG | + | chr4_2:44810154-44810173 | Msa0601790:CDS | 25.0% |
| ! | TAATTCAAATGGAACTACAT+TGG | + | chr4_2:44810199-44810218 | Msa0601790:CDS | 25.0% |
| !!! | AGATAATTGATAATGGGAAA+AGG | + | chr4_2:44810345-44810364 | Msa0601790:intron | 25.0% |
| !! | AATGGGAAAAGGATAAATTT+TGG | + | chr4_2:44810356-44810375 | Msa0601790:intron | 25.0% |
| !! | ATGGGAAAAGGATAAATTTT+GGG | + | chr4_2:44810357-44810376 | Msa0601790:intron | 25.0% |
| ! | ATTTGATTCCAATTGCAATA+AGG | + | chr4_2:44810481-44810500 | Msa0601790:intron | 25.0% |
| ! | AAAATTTAAGCTAGTAGTAG+TGG | + | chr4_2:44810532-44810551 | Msa0601790:intron | 25.0% |
| !!! | AAATGAACCTACTAGTTTTA+TGG | - | chr4_2:44810812-44810831 | None:intergenic | 25.0% |
| ! | TTTATGTTTACATGAACATG+AGG | + | chr4_2:44811205-44811224 | Msa0601790:CDS | 25.0% |
| !!! | AAGTTTTTCAACTAACCATA+TGG | + | chr4_2:44811371-44811390 | Msa0601790:CDS | 25.0% |
| ! | TATTAGTGCTAAAGATAATG+TGG | + | chr4_2:44811407-44811426 | Msa0601790:CDS | 25.0% |
| ! | TGTGGTTAAGCATAATAAAA+TGG | + | chr4_2:44811425-44811444 | Msa0601790:CDS | 25.0% |
| !!! | GCATAATAAAATGGATTTTG+AGG | + | chr4_2:44811434-44811453 | Msa0601790:CDS | 25.0% |
| ! | TGTTTTATGAGGTTTCACTT+TGG | - | chr4_2:44807381-44807400 | None:intergenic | 30.0% |
| AAAGTGAAACCTCATAAAAC+AGG | + | chr4_2:44807380-44807399 | Msa0601790:CDS | 30.0% | |
| AATTCTTGAGAAATCTGGTT+TGG | - | chr4_2:44807507-44807526 | None:intergenic | 30.0% | |
| ! | GAATTGTTGTTGCTTGAAAT+TGG | - | chr4_2:44807622-44807641 | None:intergenic | 30.0% |
| AAATCCAAATGGGATTTGAA+AGG | + | chr4_2:44807797-44807816 | Msa0601790:CDS | 30.0% | |
| !! | ATTTTCGGTTTGTTTGGATT+TGG | - | chr4_2:44807824-44807843 | None:intergenic | 30.0% |
| !!! | ACATTGATTTTCGGTTTGTT+TGG | - | chr4_2:44807830-44807849 | None:intergenic | 30.0% |
| !! | ACGATTTTAAGTACTATGGA+AGG | + | chr4_2:44808026-44808045 | Msa0601790:CDS | 30.0% |
| !!! | AATTCTGTTTTGGGAAGTAT+TGG | + | chr4_2:44808166-44808185 | Msa0601790:CDS | 30.0% |
| !!! | ATTCTGTTTTGGGAAGTATT+GGG | + | chr4_2:44808167-44808186 | Msa0601790:CDS | 30.0% |
| ! | GATATTGCCATTTAGACAAA+AGG | + | chr4_2:44808192-44808211 | Msa0601790:CDS | 30.0% |
| CACTATTGATAAAATTGTGC+AGG | + | chr4_2:44808291-44808310 | Msa0601790:CDS | 30.0% | |
| GTCATTTATGTAGTGACAAA+AGG | + | chr4_2:44808634-44808653 | Msa0601790:intron | 30.0% | |
| !! | CTTTGGAATTCTGATTTCAA+AGG | - | chr4_2:44809242-44809261 | None:intergenic | 30.0% |
| ! | CTTCAAAAGTATAGAAATGC+AGG | + | chr4_2:44809627-44809646 | Msa0601790:CDS | 30.0% |
| ATCCAAAAGACAAAGAAACA+TGG | + | chr4_2:44809670-44809689 | Msa0601790:CDS | 30.0% | |
| TCCAAAAGACAAAGAAACAT+GGG | + | chr4_2:44809671-44809690 | Msa0601790:CDS | 30.0% | |
| !!! | AAGAGTGCATCAATTTTTTG+TGG | - | chr4_2:44809828-44809847 | None:intergenic | 30.0% |
| !!! | GATCTGAATTTTTCAAGAAG+TGG | - | chr4_2:44809888-44809907 | None:intergenic | 30.0% |
| GAAAAATTCAGATCAACAGT+TGG | + | chr4_2:44809894-44809913 | Msa0601790:CDS | 30.0% | |
| ! | CGGTTTAAGATCTTTGATTT+AGG | + | chr4_2:44810014-44810033 | Msa0601790:CDS | 30.0% |
| ! | AAGATCTTTGATTTAGGTGT+TGG | + | chr4_2:44810020-44810039 | Msa0601790:CDS | 30.0% |
| GCTTCAGAAACTAATTCAAA+TGG | + | chr4_2:44810188-44810207 | Msa0601790:CDS | 30.0% | |
| !! | GAAAAGGATAAATTTTGGGT+CGG | + | chr4_2:44810361-44810380 | Msa0601790:intron | 30.0% |
| !! | AAAAGGATAAATTTTGGGTC+GGG | + | chr4_2:44810362-44810381 | Msa0601790:intron | 30.0% |
| GACAACATATTGAATGATTG+TGG | - | chr4_2:44810565-44810584 | None:intergenic | 30.0% | |
| ! | TACAATTTTCTCTTGCAGAT+TGG | + | chr4_2:44810641-44810660 | Msa0601790:intron | 30.0% |
| ! | TAGTGAATTTACCCTGTTTT+GGG | - | chr4_2:44810698-44810717 | None:intergenic | 30.0% |
| ! | TTAGTGAATTTACCCTGTTT+TGG | - | chr4_2:44810699-44810718 | None:intergenic | 30.0% |
| AATTTCATCTCCTAGATAGT+AGG | - | chr4_2:44810749-44810768 | None:intergenic | 30.0% | |
| AATTCCAATCACTTTCAACA+TGG | + | chr4_2:44810765-44810784 | Msa0601790:CDS | 30.0% | |
| AACTAGTAGGTTCATTTGAA+TGG | + | chr4_2:44810815-44810834 | Msa0601790:CDS | 30.0% | |
| TTGATCCATAGGTAGTAATA+AGG | - | chr4_2:44810970-44810989 | None:intergenic | 30.0% | |
| ! | AACAATTCTTGGTGTGTATA+GGG | - | chr4_2:44811055-44811074 | None:intergenic | 30.0% |
| TTGACAACTTCAACAATTCT+TGG | - | chr4_2:44811066-44811085 | None:intergenic | 30.0% | |
| AACTACAAGGTAATTGATGA+AGG | - | chr4_2:44811149-44811168 | None:intergenic | 30.0% | |
| TTCATCAATTACCTTGTAGT+TGG | + | chr4_2:44811148-44811167 | Msa0601790:CDS | 30.0% | |
| TCATCAATTACCTTGTAGTT+GGG | + | chr4_2:44811149-44811168 | Msa0601790:CDS | 30.0% | |
| AAAACTCTCTCCAATGTTTA+GGG | - | chr4_2:44811188-44811207 | None:intergenic | 30.0% | |
| TAAAACTCTCTCCAATGTTT+AGG | - | chr4_2:44811189-44811208 | None:intergenic | 30.0% | |
| ATTCCGAAATCAAGAACAAA+TGG | + | chr4_2:44811261-44811280 | Msa0601790:CDS | 30.0% | |
| CAACCATTTGTTCTTGATTT+CGG | - | chr4_2:44811267-44811286 | None:intergenic | 30.0% | |
| CTAAAATCATCCTTCAACAA+TGG | - | chr4_2:44811462-44811481 | None:intergenic | 30.0% | |
| ! | CATTGTTGAAGGATGATTTT+AGG | + | chr4_2:44811460-44811479 | Msa0601790:CDS | 30.0% |
| !! | GATTTTAGGAATTTTTTGCC+TGG | + | chr4_2:44811474-44811493 | Msa0601790:CDS | 30.0% |
| TGATTGAAAAGGTTCAAAGA+TGG | - | chr4_2:44811528-44811547 | None:intergenic | 30.0% | |
| !! | AATCAAGCTGTTTCTCTTAA+GGG | + | chr4_2:44811543-44811562 | Msa0601790:CDS | 30.0% |
| !! | GAGTTTTAGTCGAAATTCGA+CGG | + | chr4_2:44807301-44807320 | Msa0601790:CDS | 35.0% |
| ATGTTGAATGACTATGTTGC+TGG | + | chr4_2:44807350-44807369 | Msa0601790:CDS | 35.0% | |
| !! | TTTGTTGTGCCTGTTTTATG+AGG | - | chr4_2:44807392-44807411 | None:intergenic | 35.0% |
| TGTGCAATTCTTGAGAAATC+TGG | - | chr4_2:44807512-44807531 | None:intergenic | 35.0% | |
| TCTCAAGAATTGCACAACAA+TGG | + | chr4_2:44807516-44807535 | Msa0601790:CDS | 35.0% | |
| TCATTCTCACAAACAAGAGA+TGG | - | chr4_2:44807644-44807663 | None:intergenic | 35.0% | |
| ! | AAAGAGAGAGCTTTATGAAG+AGG | + | chr4_2:44807715-44807734 | Msa0601790:CDS | 35.0% |
| !!! | CAGTTCCAATGGTTTTGTTT+TGG | - | chr4_2:44807751-44807770 | None:intergenic | 35.0% |
| CCAAACTTGATGAAAAGGTA+GGG | - | chr4_2:44807915-44807934 | None:intergenic | 35.0% | |
| ! | CCTACCTTTTCATCAAGTTT+GGG | + | chr4_2:44807913-44807932 | Msa0601790:CDS | 35.0% |
| GTACTATGGAAGGTTTCAAA+TGG | + | chr4_2:44808036-44808055 | Msa0601790:CDS | 35.0% | |
| !! | GTTGATGATGATATGATACC+TGG | + | chr4_2:44808091-44808110 | Msa0601790:CDS | 35.0% |
| GATACCTGGAAAGAAAATGT+TGG | + | chr4_2:44808105-44808124 | Msa0601790:CDS | 35.0% | |
| ! | ATCTCCAACATTTTCTTTCC+AGG | - | chr4_2:44808112-44808131 | None:intergenic | 35.0% |
| TCAATAGTGATATCATAGGC+AGG | - | chr4_2:44808280-44808299 | None:intergenic | 35.0% | |
| AGACAATATGATTGTACCTG+AGG | - | chr4_2:44808414-44808433 | None:intergenic | 35.0% | |
| !! | AAGTCATTGTTTGACTTGGA+TGG | - | chr4_2:44809149-44809168 | None:intergenic | 35.0% |
| GACACTAGAGAAAAAGTCTT+TGG | - | chr4_2:44809259-44809278 | None:intergenic | 35.0% | |
| !! | GTTGGTTTGATTGCAAATAG+AGG | - | chr4_2:44809360-44809379 | None:intergenic | 35.0% |
| ! | TCTTTGTCTTTTGGATCTAC+TGG | - | chr4_2:44809666-44809685 | None:intergenic | 35.0% |
| CCAAAAGACAAAGAAACATG+GGG | + | chr4_2:44809672-44809691 | Msa0601790:CDS | 35.0% | |
| !! | CACTGTTGTTTCTGATACAT+AGG | - | chr4_2:44809718-44809737 | None:intergenic | 35.0% |
| ATCTGGCTACATAACACAAT+GGG | + | chr4_2:44809791-44809810 | Msa0601790:CDS | 35.0% | |
| !! | TTAGGTGTTGGTTCAATTTC+CGG | + | chr4_2:44810032-44810051 | Msa0601790:CDS | 35.0% |
| GAATACACTGCTTGTATAAC+TGG | - | chr4_2:44810077-44810096 | None:intergenic | 35.0% | |
| !! | AGCAGTGTATTCTAGTTTGA+AGG | + | chr4_2:44810085-44810104 | Msa0601790:CDS | 35.0% |
| !! | GCAGTGTATTCTAGTTTGAA+GGG | + | chr4_2:44810086-44810105 | Msa0601790:CDS | 35.0% |
| CCACAGTAATAACAACACTT+GGG | - | chr4_2:44810130-44810149 | None:intergenic | 35.0% | |
| TCCACAGTAATAACAACACT+TGG | - | chr4_2:44810131-44810150 | None:intergenic | 35.0% | |
| ! | CTACTGTGTCTAAAGTTCTT+TGG | + | chr4_2:44810237-44810256 | Msa0601790:CDS | 35.0% |
| ! | TGTGTCTAAAGTTCTTTGGA+TGG | + | chr4_2:44810241-44810260 | Msa0601790:CDS | 35.0% |
| AAAAATCAGACCAGACTAGT+CGG | + | chr4_2:44810418-44810437 | Msa0601790:intron | 35.0% | |
| TTGGAGATCCTTATTGCAAT+TGG | - | chr4_2:44810492-44810511 | None:intergenic | 35.0% | |
| TCAACATCATAACCCAAAAC+AGG | + | chr4_2:44810683-44810702 | Msa0601790:CDS | 35.0% | |
| CAACATCATAACCCAAAACA+GGG | + | chr4_2:44810684-44810703 | Msa0601790:CDS | 35.0% | |
| CTATCCATGTTGAAAGTGAT+TGG | - | chr4_2:44810772-44810791 | None:intergenic | 35.0% | |
| GAAGCAACCATAAAACTAGT+AGG | + | chr4_2:44810802-44810821 | Msa0601790:CDS | 35.0% | |
| !! | CTTAGTGTTTTTGATCCATG+AGG | - | chr4_2:44810841-44810860 | None:intergenic | 35.0% |
| CTAAGAAGAAGAATCATCCA+AGG | + | chr4_2:44810856-44810875 | Msa0601790:CDS | 35.0% | |
| TAAGAGCAGTAAGTGAAAGT+TGG | + | chr4_2:44810887-44810906 | Msa0601790:CDS | 35.0% | |
| TCTCACCTTATTACTACCTA+TGG | + | chr4_2:44810962-44810981 | Msa0601790:CDS | 35.0% | |
| TGAGTGCATATTTGATCCAT+AGG | - | chr4_2:44810981-44811000 | None:intergenic | 35.0% | |
| ! | CAACAATTCTTGGTGTGTAT+AGG | - | chr4_2:44811056-44811075 | None:intergenic | 35.0% |
| TTGTCAAAGAAAGACCGAAA+TGG | + | chr4_2:44811079-44811098 | Msa0601790:CDS | 35.0% | |
| TATTCTGTCGCATTCCATTT+CGG | - | chr4_2:44811096-44811115 | None:intergenic | 35.0% | |
| CAAGGTAATTGATGAAGGTA+AGG | - | chr4_2:44811144-44811163 | None:intergenic | 35.0% | |
| CATCAATTACCTTGTAGTTG+GGG | + | chr4_2:44811150-44811169 | Msa0601790:CDS | 35.0% | |
| ! | CAGTGTTTTTCCCTAAACAT+TGG | + | chr4_2:44811175-44811194 | Msa0601790:CDS | 35.0% |
| ! | ATTTGAACCGGGTTTTTCTT+AGG | - | chr4_2:44811243-44811262 | None:intergenic | 35.0% |
| TTGATTTCGGAATTTGAACC+GGG | - | chr4_2:44811254-44811273 | None:intergenic | 35.0% | |
| CTTGATTTCGGAATTTGAAC+CGG | - | chr4_2:44811255-44811274 | None:intergenic | 35.0% | |
| CGAAATCAAGAACAAATGGT+TGG | + | chr4_2:44811265-44811284 | Msa0601790:CDS | 35.0% | |
| !! | CTTGCTTGGTTTGGAAAATT+TGG | - | chr4_2:44811354-44811373 | None:intergenic | 35.0% |
| ! | GTTGAAAAACTTGCTTGGTT+TGG | - | chr4_2:44811363-44811382 | None:intergenic | 35.0% |
| ! | GGTTAGTTGAAAAACTTGCT+TGG | - | chr4_2:44811368-44811387 | None:intergenic | 35.0% |
| GAGAAACAGCTTGATTGAAA+AGG | - | chr4_2:44811539-44811558 | None:intergenic | 35.0% | |
| !! | CAATCAAGCTGTTTCTCTTA+AGG | + | chr4_2:44811542-44811561 | Msa0601790:CDS | 35.0% |
| GTCATTCAACATTCCATCCA+AGG | - | chr4_2:44807342-44807361 | None:intergenic | 40.0% | |
| ATGATCACACCACACATTGT+AGG | + | chr4_2:44807548-44807567 | Msa0601790:CDS | 40.0% | |
| ! | TGGTAATGTCCTACAATGTG+TGG | - | chr4_2:44807560-44807579 | None:intergenic | 40.0% |
| ! | TTGAAGTGTCTCAGTTCCAA+TGG | - | chr4_2:44807762-44807781 | None:intergenic | 40.0% |
| TGGACCTTTCAAATCCCATT+TGG | - | chr4_2:44807804-44807823 | None:intergenic | 40.0% | |
| ! | CCCTACCTTTTCATCAAGTT+TGG | + | chr4_2:44807912-44807931 | Msa0601790:CDS | 40.0% |
| CCCAAACTTGATGAAAAGGT+AGG | - | chr4_2:44807916-44807935 | None:intergenic | 40.0% | |
| AGCACCCAAACTTGATGAAA+AGG | - | chr4_2:44807920-44807939 | None:intergenic | 40.0% | |
| CAAGTTTGGGTGCTTTCTTT+CGG | + | chr4_2:44807926-44807945 | Msa0601790:CDS | 40.0% | |
| AAGTTTGGGTGCTTTCTTTC+GGG | + | chr4_2:44807927-44807946 | Msa0601790:CDS | 40.0% | |
| TGGAAAGCTATAACGATTCG+CGG | + | chr4_2:44807981-44808000 | Msa0601790:CDS | 40.0% | |
| TTTGCAGACAGAAGCTGATT+TGG | + | chr4_2:44808060-44808079 | Msa0601790:CDS | 40.0% | |
| !! | AGATTTTGGCACATGTAGCT+GGG | + | chr4_2:44808128-44808147 | Msa0601790:CDS | 40.0% |
| ! | ACTCCTTTTACCTTCTCAAC+TGG | + | chr4_2:44808376-44808395 | Msa0601790:CDS | 40.0% |
| TCACCAGTTGAGAAGGTAAA+AGG | - | chr4_2:44808382-44808401 | None:intergenic | 40.0% | |
| CAAATCTTCACCAGTTGAGA+AGG | - | chr4_2:44808389-44808408 | None:intergenic | 40.0% | |
| AAATTATGGGGGTTCATGCA+TGG | - | chr4_2:44808546-44808565 | None:intergenic | 40.0% | |
| ! | GCAAGTGTTTCTGAACCTAA+TGG | - | chr4_2:44809195-44809214 | None:intergenic | 40.0% |
| ! | TTTACATGTGTTGGTGCACT+AGG | + | chr4_2:44809519-44809538 | Msa0601790:intron | 40.0% |
| ! | TTACATGTGTTGGTGCACTA+GGG | + | chr4_2:44809520-44809539 | Msa0601790:intron | 40.0% |
| GGTTGAACGCTAAAACTTGT+CGG | + | chr4_2:44809541-44809560 | Msa0601790:intron | 40.0% | |
| ACACCAGAAACACATTCGAT+CGG | + | chr4_2:44809564-44809583 | Msa0601790:intron | 40.0% | |
| AATCCGATCGAATGTGTTTC+TGG | - | chr4_2:44809570-44809589 | None:intergenic | 40.0% | |
| ! | CCCCATGTTTCTTTGTCTTT+TGG | - | chr4_2:44809675-44809694 | None:intergenic | 40.0% |
| TTCAAGTACGCGATGATCAA+TGG | + | chr4_2:44809754-44809773 | Msa0601790:CDS | 40.0% | |
| CATCTGGCTACATAACACAA+TGG | + | chr4_2:44809790-44809809 | Msa0601790:CDS | 40.0% | |
| CAGATCAACAGTTGGCAAAA+AGG | + | chr4_2:44809902-44809921 | Msa0601790:CDS | 40.0% | |
| AAGGCCTATATTGTTGTCTC+TGG | + | chr4_2:44809921-44809940 | Msa0601790:CDS | 40.0% | |
| TCCACCAGAGACAACAATAT+AGG | - | chr4_2:44809928-44809947 | None:intergenic | 40.0% | |
| !! | TGTTGGTTTGCAAAGAACGT+CGG | + | chr4_2:44809994-44810013 | Msa0601790:CDS | 40.0% |
| !! | TAGGTGTTGGTTCAATTTCC+GGG | + | chr4_2:44810033-44810052 | Msa0601790:CDS | 40.0% |
| ! | CCCAAGTGTTGTTATTACTG+TGG | + | chr4_2:44810127-44810146 | Msa0601790:CDS | 40.0% |
| !! | TGTGAGAAAGGCTTTGAAGA+TGG | + | chr4_2:44810166-44810185 | Msa0601790:CDS | 40.0% |
| !! | TACATTGGTTCTTCTGCCTA+GGG | + | chr4_2:44810214-44810233 | Msa0601790:CDS | 40.0% |
| ! | TCGATAAACTGACTAGTCCA+TGG | - | chr4_2:44810458-44810477 | None:intergenic | 40.0% |
| ATCTCCTAGATAGTAGGCAT+TGG | - | chr4_2:44810743-44810762 | None:intergenic | 40.0% | |
| AGAAGAAGAATCATCCAAGG+TGG | + | chr4_2:44810859-44810878 | Msa0601790:CDS | 40.0% | |
| CCAAAGTTGTCATCTGAAGA+TGG | - | chr4_2:44810916-44810935 | None:intergenic | 40.0% | |
| CCATCTTCAGATGACAACTT+TGG | + | chr4_2:44810913-44810932 | Msa0601790:CDS | 40.0% | |
| GAGAAACTTGAGGGTCATAA+TGG | - | chr4_2:44811011-44811030 | None:intergenic | 40.0% | |
| TGATGAAGGTAAGGTGTGTT+TGG | - | chr4_2:44811135-44811154 | None:intergenic | 40.0% | |
| TGAGGATCCTAAGAAAAACC+CGG | + | chr4_2:44811233-44811252 | Msa0601790:CDS | 40.0% | |
| TCAACTAACCATATGGAACC+AGG | + | chr4_2:44811378-44811397 | Msa0601790:CDS | 40.0% | |
| TTAGCACTAATATGTGCACC+TGG | - | chr4_2:44811399-44811418 | None:intergenic | 40.0% | |
| !!! | TTTTGAGGTGCCATTGTTGA+AGG | + | chr4_2:44811449-44811468 | Msa0601790:CDS | 40.0% |
| GATGGTAATCTTGAAGCTGA+AGG | - | chr4_2:44811510-44811529 | None:intergenic | 40.0% | |
| ! | GTTGCTGTTGATCATCATAC+TGG | + | chr4_2:44811630-44811649 | Msa0601790:CDS | 40.0% |
| AGAAGTGGAGATTCCTTGGA+TGG | + | chr4_2:44807326-44807345 | Msa0601790:CDS | 45.0% | |
| TGAGTGAAGATGCAGCTTCT+TGG | - | chr4_2:44807580-44807599 | None:intergenic | 45.0% | |
| !! | GAGATTTTGGCACATGTAGC+TGG | + | chr4_2:44808127-44808146 | Msa0601790:CDS | 45.0% |
| !!! | CTGTTTTGGGAAGTATTGGG+AGG | + | chr4_2:44808170-44808189 | Msa0601790:CDS | 45.0% |
| GTGATATCATAGGCAGGATC+AGG | - | chr4_2:44808274-44808293 | None:intergenic | 45.0% | |
| GTGCTCAACTAGTTGCCATT+AGG | + | chr4_2:44809177-44809196 | Msa0601790:intron | 45.0% | |
| TGTGAATGCGGTATCATGTC+TGG | - | chr4_2:44809478-44809497 | None:intergenic | 45.0% | |
| AAGTACGCGATGATCAATGG+TGG | + | chr4_2:44809757-44809776 | Msa0601790:CDS | 45.0% | |
| !! | TGGTGGAAAGCACTTTCATC+TGG | + | chr4_2:44809774-44809793 | Msa0601790:CDS | 45.0% |
| GCCTATATTGTTGTCTCTGG+TGG | + | chr4_2:44809924-44809943 | Msa0601790:CDS | 45.0% | |
| CGTTCTTTGCAAACCAACAG+AGG | - | chr4_2:44809993-44810012 | None:intergenic | 45.0% | |
| !! | AGGTGTTGGTTCAATTTCCG+GGG | + | chr4_2:44810034-44810053 | Msa0601790:CDS | 45.0% |
| !! | CTACATTGGTTCTTCTGCCT+AGG | + | chr4_2:44810213-44810232 | Msa0601790:CDS | 45.0% |
| ACTTTAGACACAGTAGCCCT+AGG | - | chr4_2:44810233-44810252 | None:intergenic | 45.0% | |
| ! | TGACTAGTCCATGGTTCAAC+TGG | - | chr4_2:44810449-44810468 | None:intergenic | 45.0% |
| CTCACCAATGCCTACTATCT+AGG | + | chr4_2:44810736-44810755 | Msa0601790:CDS | 45.0% | |
| GGTTCATTTGAATGGCCTCA+TGG | + | chr4_2:44810823-44810842 | Msa0601790:CDS | 45.0% | |
| !! | GTTCTGGGAGAGAAACTTGA+GGG | - | chr4_2:44811020-44811039 | None:intergenic | 45.0% |
| !! | AGTTCTGGGAGAGAAACTTG+AGG | - | chr4_2:44811021-44811040 | None:intergenic | 45.0% |
| ! | TCTTGGTGTGTATAGGGAGA+TGG | - | chr4_2:44811049-44811068 | None:intergenic | 45.0% |
| GAAGGTAAGGTGTGTTTGGA+TGG | - | chr4_2:44811131-44811150 | None:intergenic | 45.0% | |
| CATGAACATGAGGTTCACTG+AGG | + | chr4_2:44811215-44811234 | Msa0601790:CDS | 45.0% | |
| CAAATGGTTGGCAAGCTTCA+TGG | + | chr4_2:44811277-44811296 | Msa0601790:CDS | 45.0% | |
| TATGTGCACCTGGTTCCATA+TGG | - | chr4_2:44811389-44811408 | None:intergenic | 45.0% | |
| !!! | GCTGAAGGCATTTTCATTCC+AGG | - | chr4_2:44811495-44811514 | None:intergenic | 45.0% |
| CTTAAGGGACTTAAAGCTGC+TGG | + | chr4_2:44811558-44811577 | Msa0601790:CDS | 45.0% | |
| ! | TAAAGCTGCTGGTGCTAAGT+TGG | + | chr4_2:44811569-44811588 | Msa0601790:CDS | 45.0% |
| ! | AAAGCTGCTGGTGCTAAGTT+GGG | + | chr4_2:44811570-44811589 | Msa0601790:CDS | 45.0% |
| CAGAATCTTGAGCAGTGATG+AGG | - | chr4_2:44811660-44811679 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTAACAAAAAT+TGG | + | chr4_2:44808489-44808508 | Msa0601790:intron | 5.0% |
| !! | ATATATAAAATAAAATTATG+GGG | - | chr4_2:44808558-44808577 | None:intergenic | 5.0% |
| !! | GTATATATAAAATAAAATTA+TGG | - | chr4_2:44808560-44808579 | None:intergenic | 5.0% |
| TTCTTTCGGGAGTCCAAACG+AGG | + | chr4_2:44807940-44807959 | Msa0601790:CDS | 50.0% | |
| CTGGTGAAGATTTGCACCTC+AGG | + | chr4_2:44808395-44808414 | Msa0601790:CDS | 50.0% | |
| CATGTCTGGTGTCTGTGACA+GGG | - | chr4_2:44809464-44809483 | None:intergenic | 50.0% | |
| TCATGTCTGGTGTCTGTGAC+AGG | - | chr4_2:44809465-44809484 | None:intergenic | 50.0% | |
| CTGGTGTCTACGTGTGAATG+CGG | - | chr4_2:44809490-44809509 | None:intergenic | 50.0% | |
| AAGCTGCAGCAGCTCTCAAA+TGG | + | chr4_2:44809967-44809986 | Msa0601790:CDS | 50.0% | |
| AGCTCTCAAATGGCCTCTGT+TGG | + | chr4_2:44809977-44809996 | Msa0601790:CDS | 50.0% | |
| ! | ACTGGTTGAACCGACTAGTC+TGG | - | chr4_2:44810431-44810450 | None:intergenic | 50.0% |
| CGGTTCAACCAGTTGAACCA+TGG | + | chr4_2:44810438-44810457 | Msa0601790:intron | 50.0% | |
| CTGCTCTTATGAGTCCACCT+TGG | - | chr4_2:44810876-44810895 | None:intergenic | 50.0% | |
| GGGAGATGGAAGAGAGTTCT+GGG | - | chr4_2:44811035-44811054 | None:intergenic | 50.0% | |
| AGGGAGATGGAAGAGAGTTC+TGG | - | chr4_2:44811036-44811055 | None:intergenic | 50.0% | |
| AACACTGCTCCCCAACTACA+AGG | - | chr4_2:44811162-44811181 | None:intergenic | 50.0% | |
| CGAAATTCGACGGCGAGAAG+TGG | + | chr4_2:44807311-44807330 | Msa0601790:CDS | 55.0% | |
| GGCGAGAAGTGGAGATTCCT+TGG | + | chr4_2:44807322-44807341 | Msa0601790:CDS | 55.0% | |
| GGGTTCATGCATGGCACCTA+TGG | - | chr4_2:44808537-44808556 | None:intergenic | 55.0% | |
| ! | GCTGCTGCAGCTTGTTCACA+AGG | - | chr4_2:44809960-44809979 | None:intergenic | 55.0% |
| ! | TGCTGGTGCTAAGTTGGGAC+AGG | + | chr4_2:44811575-44811594 | Msa0601790:CDS | 55.0% |
| CTCTTGAGCGACGCCTCGTT+TGG | - | chr4_2:44807956-44807975 | None:intergenic | 60.0% | |
| GGCGTCGCTCAAGAGAATCG+TGG | + | chr4_2:44807961-44807980 | Msa0601790:CDS | 60.0% | |
| !! | TTCCGGGGTGTCGAACTCTG+AGG | + | chr4_2:44810049-44810068 | Msa0601790:CDS | 60.0% |
| TGCCTCAGAGTTCGACACCC+CGG | - | chr4_2:44810054-44810073 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 44807299 | 44811680 | 44807299 | ID=Msa0601790;Name=Msa0601790 |
| chr4_2 | mRNA | 44807299 | 44811680 | 44807299 | ID=Msa0601790-mRNA-1;Parent=Msa0601790;Name=Msa0601790-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|936 |
| chr4_2 | exon | 44807299 | 44808416 | 44807299 | ID=Msa0601790-mRNA-1:exon:9950;Parent=Msa0601790-mRNA-1 |
| chr4_2 | exon | 44809620 | 44810290 | 44809620 | ID=Msa0601790-mRNA-1:exon:9951;Parent=Msa0601790-mRNA-1 |
| chr4_2 | exon | 44810659 | 44811680 | 44810659 | ID=Msa0601790-mRNA-1:exon:9952;Parent=Msa0601790-mRNA-1 |
| chr4_2 | CDS | 44807299 | 44808416 | 44807299 | ID=Msa0601790-mRNA-1:cds;Parent=Msa0601790-mRNA-1 |
| chr4_2 | CDS | 44809620 | 44810290 | 44809620 | ID=Msa0601790-mRNA-1:cds;Parent=Msa0601790-mRNA-1 |
| chr4_2 | CDS | 44810659 | 44811680 | 44810659 | ID=Msa0601790-mRNA-1:cds;Parent=Msa0601790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
