Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1382540 | XP_013466118.1 | 99.226 | 646 | 2 | 1 | 1 | 646 | 1 | 643 | 0.0 | 1311 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1382540 | sp|O04235|SSRP1_VICFA | 94.127 | 647 | 32 | 4 | 1 | 646 | 1 | 642 | 0.0 | 1166 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1382540 | A0A072VEB0 | 99.226 | 646 | 2 | 1 | 1 | 646 | 1 | 643 | 0.0 | 1311 |
Gene ID | Type | Classification |
---|---|---|
Msa1382540 | TR | HMG |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001450 | Msa1382540 | 0.816379 | 5.701486e-52 | -8.615850e-47 |
Msa0001780 | Msa1382540 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
Msa0003700 | Msa1382540 | 0.944542 | 1.609311e-103 | -8.615850e-47 |
Msa0004920 | Msa1382540 | 0.800730 | 1.256377e-48 | -8.615850e-47 |
Msa0007480 | Msa1382540 | 0.811171 | 8.000634e-51 | -8.615850e-47 |
Msa0017510 | Msa1382540 | 0.843140 | 1.682188e-58 | -8.615850e-47 |
Msa0020930 | Msa1382540 | 0.834878 | 2.323645e-56 | -8.615850e-47 |
Msa0024210 | Msa1382540 | -0.839014 | 2.041485e-57 | -8.615850e-47 |
Msa0024550 | Msa1382540 | 0.807458 | 5.004654e-50 | -8.615850e-47 |
Msa0030170 | Msa1382540 | 0.805539 | 1.271591e-49 | -8.615850e-47 |
Msa0031340 | Msa1382540 | 0.841250 | 5.323525e-58 | -8.615850e-47 |
Msa0040450 | Msa1382540 | 0.805725 | 1.161815e-49 | -8.615850e-47 |
Msa0046100 | Msa1382540 | 0.821214 | 4.548240e-53 | -8.615850e-47 |
Msa0051020 | Msa1382540 | 0.810673 | 1.025260e-50 | -8.615850e-47 |
Msa0053780 | Msa1382540 | 0.803571 | 3.272306e-49 | -8.615850e-47 |
Msa0068680 | Msa1382540 | 0.834545 | 2.817136e-56 | -8.615850e-47 |
Msa0069330 | Msa1382540 | 0.817390 | 3.380099e-52 | -8.615850e-47 |
Msa0074700 | Msa1382540 | 0.806382 | 8.450793e-50 | -8.615850e-47 |
Msa0079070 | Msa1382540 | 0.823017 | 1.736582e-53 | -8.615850e-47 |
Msa0083280 | Msa1382540 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
Msa0084080 | Msa1382540 | 0.811801 | 5.838688e-51 | -8.615850e-47 |
Msa0090360 | Msa1382540 | 0.847195 | 1.348267e-59 | -8.615850e-47 |
Msa0094120 | Msa1382540 | 0.828094 | 1.088374e-54 | -8.615850e-47 |
Msa0095560 | Msa1382540 | 0.808112 | 3.635073e-50 | -8.615850e-47 |
Msa0097840 | Msa1382540 | 0.827808 | 1.274813e-54 | -8.615850e-47 |
Msa0101270 | Msa1382540 | 0.812993 | 3.204596e-51 | -8.615850e-47 |
Msa0102200 | Msa1382540 | 0.808789 | 2.605739e-50 | -8.615850e-47 |
Msa0104550 | Msa1382540 | 0.824180 | 9.282187e-54 | -8.615850e-47 |
Msa0110970 | Msa1382540 | 0.836081 | 1.153519e-56 | -8.615850e-47 |
Msa0114060 | Msa1382540 | 0.846169 | 2.571852e-59 | -8.615850e-47 |
Msa0120010 | Msa1382540 | -0.812694 | 3.727647e-51 | -8.615850e-47 |
Msa0120020 | Msa1382540 | -0.810439 | 1.152002e-50 | -8.615850e-47 |
Msa0120040 | Msa1382540 | -0.824441 | 8.060537e-54 | -8.615850e-47 |
Msa0120400 | Msa1382540 | 0.816714 | 4.795384e-52 | -8.615850e-47 |
Msa1346370 | Msa1382540 | 0.810219 | 1.285288e-50 | -8.615850e-47 |
Msa1346730 | Msa1382540 | 0.815067 | 1.117930e-51 | -8.615850e-47 |
Msa1353980 | Msa1382540 | 0.830732 | 2.488974e-55 | -8.615850e-47 |
Msa1356140 | Msa1382540 | 0.855018 | 8.359000e-62 | -8.615850e-47 |
Msa1357240 | Msa1382540 | 0.803942 | 2.739421e-49 | -8.615850e-47 |
Msa1360440 | Msa1382540 | 0.840647 | 7.664088e-58 | -8.615850e-47 |
Msa1360980 | Msa1382540 | 0.800972 | 1.121554e-48 | -8.615850e-47 |
Msa1361400 | Msa1382540 | 0.813671 | 2.274715e-51 | -8.615850e-47 |
Msa1367590 | Msa1382540 | 0.814691 | 1.354225e-51 | -8.615850e-47 |
Msa1372760 | Msa1382540 | 0.805131 | 1.548272e-49 | -8.615850e-47 |
Msa1373330 | Msa1382540 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
Msa1374040 | Msa1382540 | 0.895349 | 1.042682e-75 | -8.615850e-47 |
Msa1374470 | Msa1382540 | 0.815554 | 8.711950e-52 | -8.615850e-47 |
Msa1374550 | Msa1382540 | 0.835870 | 1.304670e-56 | -8.615850e-47 |
Msa1375560 | Msa1382540 | 0.828548 | 8.457339e-55 | -8.615850e-47 |
Msa1377540 | Msa1382540 | -0.816015 | 6.876114e-52 | -8.615850e-47 |
Msa1382540 | Msa1382560 | 0.806434 | 8.242551e-50 | -8.615850e-47 |
Msa1382540 | Msa1385000 | 0.814245 | 1.699428e-51 | -8.615850e-47 |
Msa1382540 | Msa1400870 | -0.804633 | 1.967024e-49 | -8.615850e-47 |
Msa1382540 | Msa1404300 | 0.805579 | 1.247074e-49 | -8.615850e-47 |
Msa1382540 | Msa1411020 | 0.813755 | 2.179510e-51 | -8.615850e-47 |
Msa1382540 | Msa1411700 | 0.806129 | 9.556842e-50 | -8.615850e-47 |
Msa1382540 | Msa1417420 | 0.816545 | 5.233222e-52 | -8.615850e-47 |
Msa1382540 | Msa1420490 | 0.807180 | 5.733800e-50 | -8.615850e-47 |
Msa1382540 | Msa1422580 | 0.807501 | 4.901841e-50 | -8.615850e-47 |
Msa1382540 | Msa1423390 | 0.804598 | 2.000635e-49 | -8.615850e-47 |
Msa1382540 | Msa1423880 | 0.816778 | 4.640265e-52 | -8.615850e-47 |
Msa1382540 | Msa1424290 | 0.810998 | 8.720081e-51 | -8.615850e-47 |
Msa1382540 | Msa1426030 | 0.823904 | 1.077406e-53 | -8.615850e-47 |
Msa1382540 | Msa1433390 | 0.842958 | 1.880942e-58 | -8.615850e-47 |
Msa1382540 | Msa1434350 | 0.808793 | 2.600897e-50 | -8.615850e-47 |
Msa1382540 | Msa1439320 | 0.809532 | 1.805963e-50 | -8.615850e-47 |
Msa1382540 | Msa1439610 | 0.816319 | 5.879149e-52 | -8.615850e-47 |
Msa1382540 | Msa1440370 | 0.803377 | 3.588309e-49 | -8.615850e-47 |
Msa1382540 | Msa1440810 | 0.800550 | 1.367502e-48 | -8.615850e-47 |
Msa1382540 | Msa1451160 | 0.828828 | 7.235521e-55 | -8.615850e-47 |
Msa1382540 | Msa1452240 | 0.818440 | 1.957998e-52 | -8.615850e-47 |
Msa1382540 | Msa1459690 | 0.824233 | 9.020354e-54 | -8.615850e-47 |
Msa1382540 | Msa1460050 | 0.816511 | 5.325804e-52 | -8.615850e-47 |
Msa1382540 | Msa1461300 | 0.805001 | 1.647594e-49 | -8.615850e-47 |
Msa1382540 | Msa1464810 | 0.833369 | 5.549121e-56 | -8.615850e-47 |
Msa1382540 | Msa1465310 | 0.814187 | 1.750100e-51 | -8.615850e-47 |
Msa1382540 | Msa1466540 | 0.804917 | 1.715628e-49 | -8.615850e-47 |
Msa0602870 | Msa1382540 | 0.841091 | 5.864651e-58 | -8.615850e-47 |
Msa0608320 | Msa1382540 | 0.804968 | 1.674297e-49 | -8.615850e-47 |
Msa0609410 | Msa1382540 | -0.816150 | 6.415685e-52 | -8.615850e-47 |
Msa0615710 | Msa1382540 | 0.839592 | 1.445237e-57 | -8.615850e-47 |
Msa0620240 | Msa1382540 | 0.806730 | 7.136481e-50 | -8.615850e-47 |
Msa0623790 | Msa1382540 | 0.808158 | 3.553357e-50 | -8.615850e-47 |
Msa0626490 | Msa1382540 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
Msa0627450 | Msa1382540 | 0.864395 | 1.253728e-64 | -8.615850e-47 |
Msa0639310 | Msa1382540 | 0.809481 | 1.852662e-50 | -8.615850e-47 |
Msa0643560 | Msa1382540 | 0.804591 | 2.007547e-49 | -8.615850e-47 |
Msa0643890 | Msa1382540 | 0.846599 | 1.962466e-59 | -8.615850e-47 |
Msa0648880 | Msa1382540 | 0.814311 | 1.643744e-51 | -8.615850e-47 |
Msa0657580 | Msa1382540 | 0.807699 | 4.448237e-50 | -8.615850e-47 |
Msa0657750 | Msa1382540 | 0.803745 | 3.010377e-49 | -8.615850e-47 |
Msa0663240 | Msa1382540 | 0.802420 | 5.657741e-49 | -8.615850e-47 |
Msa0663390 | Msa1382540 | 0.822441 | 2.365635e-53 | -8.615850e-47 |
Msa0667050 | Msa1382540 | 0.818855 | 1.576558e-52 | -8.615850e-47 |
Msa0669320 | Msa1382540 | 0.811693 | 6.162092e-51 | -8.615850e-47 |
Msa0669520 | Msa1382540 | 0.812501 | 4.107500e-51 | -8.615850e-47 |
Msa0672690 | Msa1382540 | 0.808778 | 2.620320e-50 | -8.615850e-47 |
Msa0677410 | Msa1382540 | 0.800682 | 1.285172e-48 | -8.615850e-47 |
Msa0682620 | Msa1382540 | 0.805985 | 1.024704e-49 | -8.615850e-47 |
Msa0683510 | Msa1382540 | 0.844935 | 5.554699e-59 | -8.615850e-47 |
Msa0683570 | Msa1382540 | 0.811245 | 7.708225e-51 | -8.615850e-47 |
Msa0687020 | Msa1382540 | 0.802206 | 6.262967e-49 | -8.615850e-47 |
Msa0688480 | Msa1382540 | 0.813716 | 2.223086e-51 | -8.615850e-47 |
Msa0688770 | Msa1382540 | 0.809514 | 1.822073e-50 | -8.615850e-47 |
Msa0691380 | Msa1382540 | 0.808498 | 3.006634e-50 | -8.615850e-47 |
Msa0692980 | Msa1382540 | 0.801012 | 1.100485e-48 | -8.615850e-47 |
Msa0702440 | Msa1382540 | 0.824007 | 1.019074e-53 | -8.615850e-47 |
Msa0702470 | Msa1382540 | 0.822345 | 2.489553e-53 | -8.615850e-47 |
Msa0702830 | Msa1382540 | 0.818835 | 1.593265e-52 | -8.615850e-47 |
Msa0703050 | Msa1382540 | 0.812590 | 3.926695e-51 | -8.615850e-47 |
Msa0708520 | Msa1382540 | 0.801254 | 9.820820e-49 | -8.615850e-47 |
Msa0709400 | Msa1382540 | 0.836010 | 1.202139e-56 | -8.615850e-47 |
Msa0710800 | Msa1382540 | 0.829818 | 4.160363e-55 | -8.615850e-47 |
Msa0713790 | Msa1382540 | 0.814896 | 1.219537e-51 | -8.615850e-47 |
Msa0729720 | Msa1382540 | 0.826159 | 3.160241e-54 | -8.615850e-47 |
Msa0740510 | Msa1382540 | 0.830884 | 2.283706e-55 | -8.615850e-47 |
Msa0741240 | Msa1382540 | 0.826817 | 2.202740e-54 | -8.615850e-47 |
Msa0767300 | Msa1382540 | 0.813192 | 2.898228e-51 | -8.615850e-47 |
Msa0770080 | Msa1382540 | 0.818401 | 1.997903e-52 | -8.615850e-47 |
Msa0770720 | Msa1382540 | 0.800224 | 1.593189e-48 | -8.615850e-47 |
Msa0780250 | Msa1382540 | 0.800201 | 1.610883e-48 | -8.615850e-47 |
Msa0785210 | Msa1382540 | 0.809406 | 1.922457e-50 | -8.615850e-47 |
Msa0796530 | Msa1382540 | 0.808320 | 3.281735e-50 | -8.615850e-47 |
Msa0806790 | Msa1382540 | 0.809744 | 1.626459e-50 | -8.615850e-47 |
Msa0806800 | Msa1382540 | 0.814382 | 1.584775e-51 | -8.615850e-47 |
Msa0816710 | Msa1382540 | 0.802098 | 6.592676e-49 | -8.615850e-47 |
Msa0820770 | Msa1382540 | 0.830918 | 2.240265e-55 | -8.615850e-47 |
Msa0820990 | Msa1382540 | 0.800337 | 1.511085e-48 | -8.615850e-47 |
Msa0821760 | Msa1382540 | 0.813656 | 2.292189e-51 | -8.615850e-47 |
Msa0822870 | Msa1382540 | 0.804070 | 2.577567e-49 | -8.615850e-47 |
Msa0838580 | Msa1382540 | 0.800269 | 1.559970e-48 | -8.615850e-47 |
Msa0841340 | Msa1382540 | 0.816181 | 6.312247e-52 | -8.615850e-47 |
Msa0123560 | Msa1382540 | 0.812051 | 5.148988e-51 | -8.615850e-47 |
Msa0124060 | Msa1382540 | 0.809621 | 1.728689e-50 | -8.615850e-47 |
Msa0126920 | Msa1382540 | -0.824468 | 7.940439e-54 | -8.615850e-47 |
Msa0127650 | Msa1382540 | 0.819597 | 1.068538e-52 | -8.615850e-47 |
Msa0137840 | Msa1382540 | 0.843157 | 1.664862e-58 | -8.615850e-47 |
Msa0140780 | Msa1382540 | 0.820853 | 5.506134e-53 | -8.615850e-47 |
Msa0140960 | Msa1382540 | 0.825840 | 3.764350e-54 | -8.615850e-47 |
Msa0145580 | Msa1382540 | 0.818467 | 1.930727e-52 | -8.615850e-47 |
Msa0146260 | Msa1382540 | 0.895850 | 6.471768e-76 | -8.615850e-47 |
Msa0150570 | Msa1382540 | 0.800790 | 1.221403e-48 | -8.615850e-47 |
Msa0157290 | Msa1382540 | 0.843717 | 1.180124e-58 | -8.615850e-47 |
Msa0159930 | Msa1382540 | 0.859189 | 4.914071e-63 | -8.615850e-47 |
Msa0168500 | Msa1382540 | 0.822103 | 2.832830e-53 | -8.615850e-47 |
Msa0169860 | Msa1382540 | 0.820015 | 8.571770e-53 | -8.615850e-47 |
Msa0170570 | Msa1382540 | 0.809075 | 2.263628e-50 | -8.615850e-47 |
Msa0171290 | Msa1382540 | 0.869107 | 3.965877e-66 | -8.615850e-47 |
Msa0183050 | Msa1382540 | 0.825685 | 4.096798e-54 | -8.615850e-47 |
Msa0184040 | Msa1382540 | 0.841725 | 3.991351e-58 | -8.615850e-47 |
Msa0195630 | Msa1382540 | 0.808067 | 3.716319e-50 | -8.615850e-47 |
Msa0200260 | Msa1382540 | 0.809250 | 2.076609e-50 | -8.615850e-47 |
Msa0202950 | Msa1382540 | 0.809089 | 2.247649e-50 | -8.615850e-47 |
Msa0211150 | Msa1382540 | 0.851893 | 6.594742e-61 | -8.615850e-47 |
Msa0212990 | Msa1382540 | 0.806520 | 7.905805e-50 | -8.615850e-47 |
Msa0220580 | Msa1382540 | 0.820350 | 7.186086e-53 | -8.615850e-47 |
Msa0221290 | Msa1382540 | 0.803856 | 2.855068e-49 | -8.615850e-47 |
Msa0221470 | Msa1382540 | 0.801637 | 8.197521e-49 | -8.615850e-47 |
Msa0222620 | Msa1382540 | 0.808686 | 2.741605e-50 | -8.615850e-47 |
Msa0223690 | Msa1382540 | 0.810139 | 1.337001e-50 | -8.615850e-47 |
Msa0225740 | Msa1382540 | 0.831027 | 2.106433e-55 | -8.615850e-47 |
Msa0226540 | Msa1382540 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
Msa0231980 | Msa1382540 | 0.804063 | 2.585449e-49 | -8.615850e-47 |
Msa0232050 | Msa1382540 | 0.803643 | 3.160395e-49 | -8.615850e-47 |
Msa0237410 | Msa1382540 | 0.801852 | 7.404258e-49 | -8.615850e-47 |
Msa1224840 | Msa1382540 | 0.801261 | 9.785459e-49 | -8.615850e-47 |
Msa1225700 | Msa1382540 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
Msa1233910 | Msa1382540 | 0.807447 | 5.033255e-50 | -8.615850e-47 |
Msa1236100 | Msa1382540 | 0.800162 | 1.640263e-48 | -8.615850e-47 |
Msa1238930 | Msa1382540 | 0.803258 | 3.799023e-49 | -8.615850e-47 |
Msa1244600 | Msa1382540 | 0.827349 | 1.642923e-54 | -8.615850e-47 |
Msa1247250 | Msa1382540 | 0.806018 | 1.008383e-49 | -8.615850e-47 |
Msa1250530 | Msa1382540 | 0.800295 | 1.540813e-48 | -8.615850e-47 |
Msa1253020 | Msa1382540 | 0.822124 | 2.801825e-53 | -8.615850e-47 |
Msa1256470 | Msa1382540 | 0.803772 | 2.972553e-49 | -8.615850e-47 |
Msa1276660 | Msa1382540 | 0.808365 | 3.210435e-50 | -8.615850e-47 |
Msa1279380 | Msa1382540 | 0.823102 | 1.659050e-53 | -8.615850e-47 |
Msa1279400 | Msa1382540 | 0.813295 | 2.751120e-51 | -8.615850e-47 |
Msa1284550 | Msa1382540 | 0.825864 | 3.715351e-54 | -8.615850e-47 |
Msa1297290 | Msa1382540 | 0.813422 | 2.580997e-51 | -8.615850e-47 |
Msa1303240 | Msa1382540 | 0.800544 | 1.370996e-48 | -8.615850e-47 |
Msa1303250 | Msa1382540 | 0.804427 | 2.171191e-49 | -8.615850e-47 |
Msa1305810 | Msa1382540 | 0.809564 | 1.778061e-50 | -8.615850e-47 |
Msa1306840 | Msa1382540 | 0.807919 | 3.994197e-50 | -8.615850e-47 |
Msa1328710 | Msa1382540 | 0.830561 | 2.739396e-55 | -8.615850e-47 |
Msa1331000 | Msa1382540 | 0.801222 | 9.967157e-49 | -8.615850e-47 |
Msa0370380 | Msa1382540 | 0.829009 | 6.543143e-55 | -8.615850e-47 |
Msa0376350 | Msa1382540 | 0.836878 | 7.229637e-57 | -8.615850e-47 |
Msa0392420 | Msa1382540 | 0.801950 | 7.067749e-49 | -8.615850e-47 |
Msa0392460 | Msa1382540 | 0.804264 | 2.347900e-49 | -8.615850e-47 |
Msa0392490 | Msa1382540 | 0.812355 | 4.419667e-51 | -8.615850e-47 |
Msa0405570 | Msa1382540 | 0.804317 | 2.289271e-49 | -8.615850e-47 |
Msa0410500 | Msa1382540 | 0.804157 | 2.471826e-49 | -8.615850e-47 |
Msa0410650 | Msa1382540 | 0.834457 | 2.964513e-56 | -8.615850e-47 |
Msa0417270 | Msa1382540 | 0.841946 | 3.490752e-58 | -8.615850e-47 |
Msa0417880 | Msa1382540 | 0.833196 | 6.126552e-56 | -8.615850e-47 |
Msa0423900 | Msa1382540 | 0.830742 | 2.474501e-55 | -8.615850e-47 |
Msa0424790 | Msa1382540 | 0.835259 | 1.861857e-56 | -8.615850e-47 |
Msa0428590 | Msa1382540 | 0.804874 | 1.751428e-49 | -8.615850e-47 |
Msa0433640 | Msa1382540 | 0.810645 | 1.040036e-50 | -8.615850e-47 |
Msa0436490 | Msa1382540 | -0.825331 | 4.969082e-54 | -8.615850e-47 |
Msa0440750 | Msa1382540 | 0.813158 | 2.948337e-51 | -8.615850e-47 |
Msa0455040 | Msa1382540 | 0.835199 | 1.927801e-56 | -8.615850e-47 |
Msa0461720 | Msa1382540 | 0.813652 | 2.297216e-51 | -8.615850e-47 |
Msa0464680 | Msa1382540 | 0.818782 | 1.637956e-52 | -8.615850e-47 |
Msa0469030 | Msa1382540 | 0.840665 | 7.583606e-58 | -8.615850e-47 |
Msa0475790 | Msa1382540 | 0.809749 | 1.622600e-50 | -8.615850e-47 |
Msa0479170 | Msa1382540 | 0.842489 | 2.507246e-58 | -8.615850e-47 |
Msa0479970 | Msa1382540 | 0.822102 | 2.835127e-53 | -8.615850e-47 |
Msa0481530 | Msa1382540 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
Msa0482340 | Msa1382540 | 0.810776 | 9.744419e-51 | -8.615850e-47 |
Msa0997970 | Msa1382540 | 0.812689 | 3.735561e-51 | -8.615850e-47 |
Msa1004840 | Msa1382540 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
Msa1005870 | Msa1382540 | 0.804618 | 1.981498e-49 | -8.615850e-47 |
Msa1009660 | Msa1382540 | 0.840098 | 1.066606e-57 | -8.615850e-47 |
Msa1019430 | Msa1382540 | 0.813658 | 2.289672e-51 | -8.615850e-47 |
Msa1019470 | Msa1382540 | 0.802104 | 6.572066e-49 | -8.615850e-47 |
Msa1020510 | Msa1382540 | 0.810225 | 1.281374e-50 | -8.615850e-47 |
Msa1020670 | Msa1382540 | 0.845777 | 3.286142e-59 | -8.615850e-47 |
Msa1040400 | Msa1382540 | 0.808066 | 3.716621e-50 | -8.615850e-47 |
Msa1047980 | Msa1382540 | 0.800390 | 1.473768e-48 | -8.615850e-47 |
Msa1050910 | Msa1382540 | 0.818691 | 1.717468e-52 | -8.615850e-47 |
Msa1051830 | Msa1382540 | 0.806906 | 6.552126e-50 | -8.615850e-47 |
Msa1054380 | Msa1382540 | 0.814033 | 1.892935e-51 | -8.615850e-47 |
Msa1062920 | Msa1382540 | 0.802913 | 4.477546e-49 | -8.615850e-47 |
Msa1065390 | Msa1382540 | 0.800374 | 1.485430e-48 | -8.615850e-47 |
Msa1078170 | Msa1382540 | 0.839855 | 1.234255e-57 | -8.615850e-47 |
Msa1079590 | Msa1382540 | 0.809827 | 1.560720e-50 | -8.615850e-47 |
Msa1079740 | Msa1382540 | 0.811474 | 6.875299e-51 | -8.615850e-47 |
Msa1085200 | Msa1382540 | 0.837706 | 4.436093e-57 | -8.615850e-47 |
Msa1092010 | Msa1382540 | 0.806754 | 7.053731e-50 | -8.615850e-47 |
Msa1096970 | Msa1382540 | 0.840624 | 7.775477e-58 | -8.615850e-47 |
Msa1103500 | Msa1382540 | 0.813481 | 2.504982e-51 | -8.615850e-47 |
Msa1106700 | Msa1382540 | 0.801542 | 8.571400e-49 | -8.615850e-47 |
Msa0243100 | Msa1382540 | 0.840919 | 6.505387e-58 | -8.615850e-47 |
Msa0249860 | Msa1382540 | 0.852081 | 5.834471e-61 | -8.615850e-47 |
Msa0255090 | Msa1382540 | 0.813860 | 2.066400e-51 | -8.615850e-47 |
Msa0259380 | Msa1382540 | 0.812774 | 3.579093e-51 | -8.615850e-47 |
Msa0259500 | Msa1382540 | 0.806583 | 7.667961e-50 | -8.615850e-47 |
Msa0261930 | Msa1382540 | 0.821682 | 3.545458e-53 | -8.615850e-47 |
Msa0264150 | Msa1382540 | 0.805007 | 1.643405e-49 | -8.615850e-47 |
Msa0272490 | Msa1382540 | 0.800844 | 1.190785e-48 | -8.615850e-47 |
Msa0283520 | Msa1382540 | 0.807985 | 3.868148e-50 | -8.615850e-47 |
Msa0284410 | Msa1382540 | 0.806939 | 6.446535e-50 | -8.615850e-47 |
Msa0284420 | Msa1382540 | 0.818751 | 1.664127e-52 | -8.615850e-47 |
Msa0287650 | Msa1382540 | 0.842482 | 2.517389e-58 | -8.615850e-47 |
Msa0292120 | Msa1382540 | 0.809251 | 2.074778e-50 | -8.615850e-47 |
Msa0292400 | Msa1382540 | 0.815903 | 7.282493e-52 | -8.615850e-47 |
Msa0297740 | Msa1382540 | 0.823464 | 1.365523e-53 | -8.615850e-47 |
Msa0305700 | Msa1382540 | 0.808856 | 2.521958e-50 | -8.615850e-47 |
Msa0309770 | Msa1382540 | 0.818335 | 2.068684e-52 | -8.615850e-47 |
Msa0311700 | Msa1382540 | 0.815015 | 1.147975e-51 | -8.615850e-47 |
Msa0316810 | Msa1382540 | 0.811605 | 6.439014e-51 | -8.615850e-47 |
Msa0330340 | Msa1382540 | 0.806618 | 7.537275e-50 | -8.615850e-47 |
Msa0332000 | Msa1382540 | 0.810349 | 1.204775e-50 | -8.615850e-47 |
Msa0334360 | Msa1382540 | 0.801391 | 9.204509e-49 | -8.615850e-47 |
Msa0334550 | Msa1382540 | 0.810517 | 1.108129e-50 | -8.615850e-47 |
Msa0339250 | Msa1382540 | 0.820051 | 8.411509e-53 | -8.615850e-47 |
Msa0341050 | Msa1382540 | 0.821802 | 3.326797e-53 | -8.615850e-47 |
Msa0341540 | Msa1382540 | 0.818097 | 2.341295e-52 | -8.615850e-47 |
Msa0344570 | Msa1382540 | 0.806165 | 9.389536e-50 | -8.615850e-47 |
Msa0345970 | Msa1382540 | 0.816723 | 4.774973e-52 | -8.615850e-47 |
Msa0357340 | Msa1382540 | 0.820280 | 7.457290e-53 | -8.615850e-47 |
Msa0363070 | Msa1382540 | 0.816204 | 6.238546e-52 | -8.615850e-47 |
Msa1111130 | Msa1382540 | 0.802624 | 5.135243e-49 | -8.615850e-47 |
Msa1121440 | Msa1382540 | 0.811912 | 5.521829e-51 | -8.615850e-47 |
Msa1123380 | Msa1382540 | 0.813119 | 3.007490e-51 | -8.615850e-47 |
Msa1124110 | Msa1382540 | 0.802892 | 4.522321e-49 | -8.615850e-47 |
Msa1124960 | Msa1382540 | 0.832522 | 9.008117e-56 | -8.615850e-47 |
Msa1128710 | Msa1382540 | 0.807033 | 6.157824e-50 | -8.615850e-47 |
Msa1133000 | Msa1382540 | 0.808800 | 2.592254e-50 | -8.615850e-47 |
Msa1134110 | Msa1382540 | 0.812335 | 4.465777e-51 | -8.615850e-47 |
Msa1137570 | Msa1382540 | 0.820786 | 5.704712e-53 | -8.615850e-47 |
Msa1140210 | Msa1382540 | 0.849102 | 4.009560e-60 | -8.615850e-47 |
Msa1142020 | Msa1382540 | 0.808760 | 2.643311e-50 | -8.615850e-47 |
Msa1147280 | Msa1382540 | 0.810634 | 1.045493e-50 | -8.615850e-47 |
Msa1147900 | Msa1382540 | 0.805807 | 1.116631e-49 | -8.615850e-47 |
Msa1147970 | Msa1382540 | 0.803696 | 3.081704e-49 | -8.615850e-47 |
Msa1151910 | Msa1382540 | 0.819759 | 9.810477e-53 | -8.615850e-47 |
Msa1163650 | Msa1382540 | -0.812729 | 3.661989e-51 | -8.615850e-47 |
Msa1165870 | Msa1382540 | 0.801579 | 8.424837e-49 | -8.615850e-47 |
Msa1167340 | Msa1382540 | 0.821849 | 3.244986e-53 | -8.615850e-47 |
Msa1168160 | Msa1382540 | 0.812284 | 4.580468e-51 | -8.615850e-47 |
Msa1170410 | Msa1382540 | 0.825100 | 5.633386e-54 | -8.615850e-47 |
Msa1189070 | Msa1382540 | 0.826202 | 3.087577e-54 | -8.615850e-47 |
Msa1190930 | Msa1382540 | 0.804148 | 2.482738e-49 | -8.615850e-47 |
Msa1197060 | Msa1382540 | 0.800881 | 1.170427e-48 | -8.615850e-47 |
Msa1199570 | Msa1382540 | 0.812923 | 3.320783e-51 | -8.615850e-47 |
Msa1199830 | Msa1382540 | -0.802552 | 5.313572e-49 | -8.615850e-47 |
Msa1199990 | Msa1382540 | 0.847057 | 1.470820e-59 | -8.615850e-47 |
Msa1200020 | Msa1382540 | 0.819578 | 1.078779e-52 | -8.615850e-47 |
Msa1204530 | Msa1382540 | 0.829495 | 4.986783e-55 | -8.615850e-47 |
Msa1209460 | Msa1382540 | 0.835828 | 1.337165e-56 | -8.615850e-47 |
Msa1212940 | Msa1382540 | 0.811542 | 6.644605e-51 | -8.615850e-47 |
Msa0487420 | Msa1382540 | 0.823800 | 1.139894e-53 | -8.615850e-47 |
Msa0487570 | Msa1382540 | 0.801709 | 7.923040e-49 | -8.615850e-47 |
Msa0487630 | Msa1382540 | 0.821483 | 3.941458e-53 | -8.615850e-47 |
Msa0502880 | Msa1382540 | 0.815083 | 1.108842e-51 | -8.615850e-47 |
Msa0507680 | Msa1382540 | 0.850491 | 1.640708e-60 | -8.615850e-47 |
Msa0509710 | Msa1382540 | 0.807367 | 5.233060e-50 | -8.615850e-47 |
Msa0516170 | Msa1382540 | 0.816849 | 4.474237e-52 | -8.615850e-47 |
Msa0521500 | Msa1382540 | 0.806942 | 6.438253e-50 | -8.615850e-47 |
Msa0521540 | Msa1382540 | 0.813664 | 2.283204e-51 | -8.615850e-47 |
Msa0522590 | Msa1382540 | -0.807411 | 5.120692e-50 | -8.615850e-47 |
Msa0523460 | Msa1382540 | 0.822194 | 2.698140e-53 | -8.615850e-47 |
Msa0524500 | Msa1382540 | 0.815452 | 9.179545e-52 | -8.615850e-47 |
Msa0547890 | Msa1382540 | 0.805864 | 1.086590e-49 | -8.615850e-47 |
Msa0556060 | Msa1382540 | 0.814092 | 1.837496e-51 | -8.615850e-47 |
Msa0566310 | Msa1382540 | 0.823833 | 1.119214e-53 | -8.615850e-47 |
Msa0571140 | Msa1382540 | 0.802122 | 6.517805e-49 | -8.615850e-47 |
Msa0572840 | Msa1382540 | 0.821736 | 3.445087e-53 | -8.615850e-47 |
Msa0574890 | Msa1382540 | 0.802914 | 4.475667e-49 | -8.615850e-47 |
Msa0576880 | Msa1382540 | 0.808835 | 2.548213e-50 | -8.615850e-47 |
Msa0577500 | Msa1382540 | 0.805693 | 1.179986e-49 | -8.615850e-47 |
Msa0585560 | Msa1382540 | 0.805686 | 1.184194e-49 | -8.615850e-47 |
Msa0588230 | Msa1382540 | 0.815036 | 1.135484e-51 | -8.615850e-47 |
Msa0602240 | Msa1382540 | 0.821095 | 4.844960e-53 | -8.615850e-47 |
Msa0602250 | Msa1382540 | 0.824920 | 6.214198e-54 | -8.615850e-47 |
Msa0602310 | Msa1382540 | 0.811238 | 7.738325e-51 | -8.615850e-47 |
Msa0602460 | Msa1382540 | 0.852758 | 3.741760e-61 | -8.615850e-47 |
Msa0843220 | Msa1382540 | 0.800757 | 1.240878e-48 | -8.615850e-47 |
Msa0847770 | Msa1382540 | 0.800206 | 1.606929e-48 | -8.615850e-47 |
Msa0861090 | Msa1382540 | 0.829505 | 4.958486e-55 | -8.615850e-47 |
Msa0861870 | Msa1382540 | 0.838250 | 3.215932e-57 | -8.615850e-47 |
Msa0866270 | Msa1382540 | 0.838520 | 2.739619e-57 | -8.615850e-47 |
Msa0869100 | Msa1382540 | 0.805523 | 1.280908e-49 | -8.615850e-47 |
Msa0880140 | Msa1382540 | 0.837578 | 4.784534e-57 | -8.615850e-47 |
Msa0880440 | Msa1382540 | 0.807974 | 3.889580e-50 | -8.615850e-47 |
Msa0881460 | Msa1382540 | 0.805685 | 1.184915e-49 | -8.615850e-47 |
Msa0884410 | Msa1382540 | -0.829011 | 6.533955e-55 | -8.615850e-47 |
Msa0896970 | Msa1382540 | 0.831149 | 1.966306e-55 | -8.615850e-47 |
Msa0909140 | Msa1382540 | 0.803634 | 3.173940e-49 | -8.615850e-47 |
Msa0924470 | Msa1382540 | 0.809659 | 1.696144e-50 | -8.615850e-47 |
Msa0933230 | Msa1382540 | 0.844837 | 5.901417e-59 | -8.615850e-47 |
Msa0933310 | Msa1382540 | 0.824113 | 9.623338e-54 | -8.615850e-47 |
Msa0935670 | Msa1382540 | 0.815954 | 7.094694e-52 | -8.615850e-47 |
Msa0945110 | Msa1382540 | 0.819598 | 1.067831e-52 | -8.615850e-47 |
Msa0945970 | Msa1382540 | 0.825239 | 5.225245e-54 | -8.615850e-47 |
Msa0947660 | Msa1382540 | 0.811431 | 7.024260e-51 | -8.615850e-47 |
Msa0963270 | Msa1382540 | 0.830700 | 2.533300e-55 | -8.615850e-47 |
Msa0966400 | Msa1382540 | 0.808303 | 3.308787e-50 | -8.615850e-47 |
Msa0967380 | Msa1382540 | 0.808056 | 3.736297e-50 | -8.615850e-47 |
Msa0968590 | Msa1382540 | 0.809025 | 2.320285e-50 | -8.615850e-47 |
Msa0971090 | Msa1382540 | 0.838568 | 2.662155e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1382540 | MtrunA17_Chr1g0155251 | 99.226 | 646 | 2 | 1 | 1 | 646 | 1 | 643 | 0.0 | 1311 |
Msa1382540 | MtrunA17_Chr5g0437031 | 88.479 | 651 | 67 | 2 | 1 | 646 | 1 | 648 | 0.0 | 1110 |
Msa1382540 | MtrunA17_Chr3g0143991 | 44.681 | 94 | 47 | 3 | 539 | 630 | 25 | 115 | 2.65e-11 | 62.4 |
Msa1382540 | MtrunA17_Chr7g0242251 | 43.750 | 80 | 41 | 2 | 554 | 632 | 47 | 123 | 7.75e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1382540 | AT3G28730.1 | 75.501 | 649 | 151 | 6 | 1 | 645 | 1 | 645 | 0.0 | 927 |
Msa1382540 | AT3G51880.2 | 45.455 | 88 | 44 | 2 | 545 | 631 | 40 | 124 | 1.51e-13 | 70.1 |
Msa1382540 | AT3G51880.4 | 45.455 | 88 | 44 | 2 | 545 | 631 | 40 | 124 | 1.81e-13 | 68.9 |
Msa1382540 | AT3G51880.5 | 45.455 | 88 | 44 | 2 | 545 | 631 | 40 | 124 | 2.07e-13 | 69.3 |
Msa1382540 | AT3G51880.1 | 45.455 | 88 | 44 | 2 | 545 | 631 | 40 | 124 | 2.07e-13 | 69.3 |
Msa1382540 | AT3G51880.3 | 45.455 | 88 | 44 | 2 | 545 | 631 | 40 | 124 | 2.07e-13 | 69.3 |
Msa1382540 | AT1G20693.2 | 46.835 | 79 | 38 | 2 | 553 | 630 | 33 | 108 | 1.81e-11 | 62.8 |
Msa1382540 | AT1G20693.3 | 46.835 | 79 | 38 | 2 | 553 | 630 | 33 | 108 | 1.88e-11 | 62.8 |
Msa1382540 | AT1G20693.1 | 46.835 | 79 | 38 | 2 | 553 | 630 | 33 | 108 | 1.93e-11 | 62.8 |
Find 208 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGGTTGCCTTAATATTAA+TGG | 0.236445 | tig0020520:+38769 | Msa1382540:exon |
ATCCTTCTTTGGTTCCTTCT+TGG | 0.242213 | tig0020520:-38181 | None:intergenic |
GTCCTGCCCATGCAGTTCTA+AGG | 0.253010 | tig0020520:+37407 | Msa1382540:intron |
TTACCAAGCCTGGAAAATTT+AGG | 0.253732 | tig0020520:+36937 | Msa1382540:CDS |
CGGGAATACCATTAATATTA+AGG | 0.257243 | tig0020520:-38777 | None:intergenic |
AGAAAGAGGTCCCACAATTT+TGG | 0.272086 | tig0020520:-39202 | None:intergenic |
AGAATAAGAGTGGGAGGTTT+AGG | 0.278835 | tig0020520:-37047 | None:intergenic |
AGGAAATATGCTGGCTTTCA+TGG | 0.282409 | tig0020520:+35463 | Msa1382540:intron |
AAAGAAGGATTTGCCTTCTA+AGG | 0.286151 | tig0020520:+38194 | Msa1382540:CDS |
CCGTGATAAAATAATGTCTA+TGG | 0.288359 | tig0020520:+35958 | Msa1382540:CDS |
TTTCTGTTACTGGGCGCAAT+TGG | 0.293918 | tig0020520:+34801 | Msa1382540:CDS |
TTAGAAGGCAAATCCTTCTT+TGG | 0.294241 | tig0020520:-38192 | None:intergenic |
CAGTTACTCCGAAGGTGTTT+TGG | 0.314648 | tig0020520:-34763 | None:intergenic |
GAGAAGCAACTTTCTGTTAC+TGG | 0.317850 | tig0020520:+34791 | Msa1382540:CDS |
TTCTGTTACTGGGCGCAATT+GGG | 0.318614 | tig0020520:+34802 | Msa1382540:CDS |
ATTCATTTCTCTGAATATTT+CGG | 0.320481 | tig0020520:-37293 | None:intergenic |
CAACCCATGAATATTGATTC+AGG | 0.326088 | tig0020520:+38727 | Msa1382540:CDS |
ACACCAAGTTGATTCGTCTT+TGG | 0.335862 | tig0020520:-34460 | None:intergenic |
TTCTTTGGTTCCTTCTTGGC+AGG | 0.345422 | tig0020520:-38177 | None:intergenic |
TAATCCTGGAATTTCATTTA+CGG | 0.345587 | tig0020520:+38452 | Msa1382540:CDS |
CTTTCTAGACCCTGCTCATC+CGG | 0.350701 | tig0020520:+39219 | Msa1382540:three_prime_UTR |
TCTTGGGCTTTGGCCTCATA+AGG | 0.353348 | tig0020520:-38655 | None:intergenic |
GAAGAAACAGAAGAAGAAAA+AGG | 0.353379 | tig0020520:+38269 | Msa1382540:CDS |
TTTCCCTTGAAGGTTTGTTT+GGG | 0.354507 | tig0020520:-35528 | None:intergenic |
ATCTCAGAAAGATTCTTTGA+TGG | 0.362156 | tig0020520:+35779 | Msa1382540:intron |
AAACCAGACAGTGCCCTCTT+AGG | 0.362568 | tig0020520:-38303 | None:intergenic |
GATCTTCATCACCAACAAAC+TGG | 0.364930 | tig0020520:-35833 | None:intergenic |
AATGAATACCACAATTTGTA+TGG | 0.365076 | tig0020520:+37309 | Msa1382540:CDS |
ATTTCCTGAATCAATATTCA+TGG | 0.371026 | tig0020520:-38731 | None:intergenic |
GGTTCTCCTACTGATGATTC+TGG | 0.376502 | tig0020520:+38016 | Msa1382540:CDS |
TGTCGATTTACCGTTACAAT+AGG | 0.381736 | tig0020520:-38885 | None:intergenic |
GATGCTGTTGTTACATTTGA+GGG | 0.383536 | tig0020520:+36004 | Msa1382540:CDS |
AGTGCCCTCTTAGGTGCATT+TGG | 0.384070 | tig0020520:-38294 | None:intergenic |
TTAGTCTTGATCCTCCTATT+CGG | 0.386509 | tig0020520:+36445 | Msa1382540:CDS |
TTAGAAGTAGATGCCTTAGA+AGG | 0.388977 | tig0020520:-38207 | None:intergenic |
TAACGGGCTGCTTGTTTGAA+TGG | 0.396951 | tig0020520:+38969 | Msa1382540:three_prime_UTR |
TGGTAAGGACACTTGATAAA+GGG | 0.401651 | tig0020520:-39264 | None:intergenic |
ATTACCTGCATCACGATATG+AGG | 0.403729 | tig0020520:-36486 | None:intergenic |
CTATGTCCCCGGGGTTATAA+CGG | 0.410143 | tig0020520:+38952 | Msa1382540:three_prime_UTR |
GTTGATAAGGCGGACATAAC+GGG | 0.414369 | tig0020520:+34418 | Msa1382540:CDS |
ATCACCAACAAACTGGGTAT+TGG | 0.417370 | tig0020520:-35826 | None:intergenic |
ACAATATTGCGTGGTTTGTC+CGG | 0.417906 | tig0020520:+36906 | Msa1382540:CDS |
CAATACATTACCTTGGTGTA+AGG | 0.418775 | tig0020520:-36036 | None:intergenic |
GGCGAACCACACTGCCGTAC+TGG | 0.419521 | tig0020520:-36242 | None:intergenic |
GTTTGAGTGTTCTATGTCCC+CGG | 0.420624 | tig0020520:+38941 | Msa1382540:three_prime_UTR |
ATTCACTGGTTTCCGTGATC+AGG | 0.421922 | tig0020520:+34510 | Msa1382540:CDS |
TAAAACTGCAGCCAAGCAAT+CGG | 0.425637 | tig0020520:-38797 | None:intergenic |
AAAGTCTGCCCTTTCCGAAT+AGG | 0.427601 | tig0020520:-36459 | None:intergenic |
ATATTGTGGTAAACACTTCA+TGG | 0.428597 | tig0020520:-36890 | None:intergenic |
GGCCACACCAACAGTTGGTT+GGG | 0.430545 | tig0020520:-37457 | None:intergenic |
CGGTGCCGCCACGGCCGCCG+AGG | 0.437836 | tig0020520:-33167 | None:intergenic |
AGTTCCAATACCCAGTTTGT+TGG | 0.440167 | tig0020520:+35822 | Msa1382540:CDS |
ACGGACGTGGGAAGAGTACT+TGG | 0.442183 | tig0020520:+38471 | Msa1382540:CDS |
TTGGTAAGGACACTTGATAA+AGG | 0.442416 | tig0020520:-39265 | None:intergenic |
CTTGGTGTTCAGATCAAAGA+TGG | 0.447302 | tig0020520:+34475 | Msa1382540:CDS |
TCCTGCCCATGCAGTTCTAA+GGG | 0.450476 | tig0020520:+37408 | Msa1382540:intron |
TTTGTTCTCGACAAGGATGA+TGG | 0.451598 | tig0020520:+37992 | Msa1382540:CDS |
GTCTCCCAAACAAACCTTCA+AGG | 0.458044 | tig0020520:+35524 | Msa1382540:CDS |
ATTAATATTAAGGCAACCTT+AGG | 0.458269 | tig0020520:-38767 | None:intergenic |
CATGCAGCCATACCTTGATA+AGG | 0.460314 | tig0020520:-39172 | None:intergenic |
ACACCTTCGGAGTAACTGTT+GGG | 0.460966 | tig0020520:+34768 | Msa1382540:CDS |
AGATGCTGTTGTTACATTTG+AGG | 0.462575 | tig0020520:+36003 | Msa1382540:CDS |
AATCTAAAGAAAACTAATCC+TGG | 0.464926 | tig0020520:+38438 | Msa1382540:CDS |
TGAAGATCGCCCTCCTGCTC+AGG | 0.466330 | tig0020520:+35848 | Msa1382540:CDS |
TAATGGTATTCCCGATTGCT+TGG | 0.467642 | tig0020520:+38786 | Msa1382540:three_prime_UTR |
ACTAAAGCTCCCGGATGAGC+AGG | 0.468194 | tig0020520:-39229 | None:intergenic |
TGGAATTTCATTTACGGACG+TGG | 0.473424 | tig0020520:+38458 | Msa1382540:CDS |
GGAGGCAAAGTTACCAAGCC+TGG | 0.474637 | tig0020520:+36927 | Msa1382540:CDS |
TGTTGATAAGGCGGACATAA+CGG | 0.474692 | tig0020520:+34417 | Msa1382540:CDS |
TTATTGGTGCTGCAGAATCC+GGG | 0.475067 | tig0020520:+34331 | Msa1382540:intron |
TTGAATGGCTTGAGGAAGGC+TGG | 0.475918 | tig0020520:+38984 | Msa1382540:three_prime_UTR |
TGGGGAGAAGTTGATCTAAA+CGG | 0.476817 | tig0020520:+34821 | Msa1382540:CDS |
TTATGTGGTTGAAAGTGAAT+TGG | 0.478915 | tig0020520:+36612 | Msa1382540:CDS |
CAAATCAATTGATGTTGATA+AGG | 0.479324 | tig0020520:+34405 | Msa1382540:CDS |
TTTGAGTGTTCTATGTCCCC+GGG | 0.479327 | tig0020520:+38942 | Msa1382540:three_prime_UTR |
AACATTACCCTCGGCGGCCG+TGG | 0.480494 | tig0020520:+33159 | Msa1382540:CDS |
TATGTCCCCGGGGTTATAAC+GGG | 0.482750 | tig0020520:+38953 | Msa1382540:three_prime_UTR |
GAATCAATATTCATGGGTTG+AGG | 0.486272 | tig0020520:-38724 | None:intergenic |
TGGCCACACCAACAGTTGGT+TGG | 0.488815 | tig0020520:-37458 | None:intergenic |
TTTCATTTCAGGAAATATGC+TGG | 0.489570 | tig0020520:+35454 | Msa1382540:intron |
AGGCTTGGTAACTTTGCCTC+CGG | 0.495486 | tig0020520:-36925 | None:intergenic |
ACAGACAAACTCACCTGAGC+AGG | 0.497300 | tig0020520:-35861 | None:intergenic |
AGTTTCTTCCAAAACACCTT+CGG | 0.497818 | tig0020520:+34755 | Msa1382540:CDS |
CAGATTTGAGTCTGATAAGA+AGG | 0.497842 | tig0020520:-37254 | None:intergenic |
TTTCACGTGGATGACACAAC+TGG | 0.498298 | tig0020520:+35569 | Msa1382540:CDS |
CACTCTTATTCTTCATGAAG+AGG | 0.498347 | tig0020520:+37058 | Msa1382540:CDS |
GCACCTAAGAGGGCACTGTC+TGG | 0.501489 | tig0020520:+38300 | Msa1382540:CDS |
AGAAGCAACTTTCTGTTACT+GGG | 0.502319 | tig0020520:+34792 | Msa1382540:CDS |
GGGTTGTTCTACAAATTCAC+TGG | 0.502970 | tig0020520:+34496 | Msa1382540:CDS |
AGGATCCAAATGCACCTAAG+AGG | 0.505192 | tig0020520:+38289 | Msa1382540:CDS |
CTTCCAGAAACCTGCCAAGA+AGG | 0.506566 | tig0020520:+38167 | Msa1382540:intron |
TGCCAAGAAGGAACCAAAGA+AGG | 0.508120 | tig0020520:+38179 | Msa1382540:CDS |
TCTATGGCTGATGTTGGTGC+TGG | 0.508943 | tig0020520:+35974 | Msa1382540:CDS |
TTTCTGATGCGCTCGAGATG+TGG | 0.509278 | tig0020520:-37516 | None:intergenic |
CCTCTGTCTCACCACCACTT+TGG | 0.510686 | tig0020520:-38060 | None:intergenic |
TCATCTTTGAAAGCTGAAGA+TGG | 0.512966 | tig0020520:+36987 | Msa1382540:CDS |
GGAGGAGAAGGAACCTTATG+AGG | 0.513515 | tig0020520:+38642 | Msa1382540:CDS |
AATATGCTGGCTTTCATGGT+TGG | 0.513596 | tig0020520:+35467 | Msa1382540:CDS |
ACGTCCGTAAATGAAATTCC+AGG | 0.513793 | tig0020520:-38456 | None:intergenic |
CAAGTTGGAGCTGTCTTACA+AGG | 0.514183 | tig0020520:+36672 | Msa1382540:CDS |
GTACCCTCATATCGTGATGC+AGG | 0.515876 | tig0020520:+36482 | Msa1382540:CDS |
CTGCTTGTTTGAATGGCTTG+AGG | 0.516394 | tig0020520:+38976 | Msa1382540:three_prime_UTR |
ACAAACTGGGTATTGGAACT+TGG | 0.516545 | tig0020520:-35819 | None:intergenic |
TTGTTTGAATGGCTTGAGGA+AGG | 0.518576 | tig0020520:+38980 | Msa1382540:three_prime_UTR |
ATGCAGCCATACCTTGATAA+GGG | 0.518872 | tig0020520:-39171 | None:intergenic |
TTTCCTGAATCAATATTCAT+GGG | 0.520202 | tig0020520:-38730 | None:intergenic |
GGGTATTGGAACTTGGTACA+TGG | 0.520299 | tig0020520:-35812 | None:intergenic |
AGGAAGGCTGGAGAAGGATG+AGG | 0.522393 | tig0020520:+38996 | Msa1382540:three_prime_UTR |
GTAGTTTGAAACTGATTATG+TGG | 0.523537 | tig0020520:+36597 | Msa1382540:intron |
TTCCTACTAGATTGACTATG+TGG | 0.523757 | tig0020520:+37185 | Msa1382540:intron |
ATTACCCTCGGCGGCCGTGG+CGG | 0.524515 | tig0020520:+33162 | Msa1382540:CDS |
AAAACTGCAGCCAAGCAATC+GGG | 0.526477 | tig0020520:-38796 | None:intergenic |
CTCAAAGTACAAAGACAAGT+TGG | 0.526767 | tig0020520:+36657 | Msa1382540:CDS |
ACCAACTGTTGGTGTGGCCA+AGG | 0.529642 | tig0020520:+37461 | Msa1382540:CDS |
CGGACATAACGGGCGTAACA+TGG | 0.530617 | tig0020520:+34428 | Msa1382540:CDS |
AATGAATCTGACAGTGCCTA+AGG | 0.531097 | tig0020520:+38751 | Msa1382540:CDS |
ATGGCTGATGTTGGTGCTGG+AGG | 0.532027 | tig0020520:+35977 | Msa1382540:CDS |
TGATAAAACCATACAAATTG+TGG | 0.532500 | tig0020520:-37317 | None:intergenic |
GTAATTCAGTAATAACATAC+TGG | 0.532948 | tig0020520:+39054 | Msa1382540:three_prime_UTR |
TTTCTAGACCCTGCTCATCC+GGG | 0.534065 | tig0020520:+39220 | Msa1382540:three_prime_UTR |
AAGTATCCCTTATCAAGGTA+TGG | 0.535971 | tig0020520:+39165 | Msa1382540:three_prime_UTR |
TTGATCCTCCTATTCGGAAA+GGG | 0.536206 | tig0020520:+36451 | Msa1382540:CDS |
CTCTTCAACAACATTACCCT+CGG | 0.540205 | tig0020520:+33150 | Msa1382540:CDS |
ATGCAATACACCAAAATTGT+GGG | 0.542628 | tig0020520:+39192 | Msa1382540:three_prime_UTR |
GGTGCCGCCACGGCCGCCGA+GGG | 0.543217 | tig0020520:-33166 | None:intergenic |
GAATTTGAGCGACATGCTGC+TGG | 0.545421 | tig0020520:+37207 | Msa1382540:CDS |
AACACCTTCGGAGTAACTGT+TGG | 0.545941 | tig0020520:+34767 | Msa1382540:CDS |
CATGCAATACACCAAAATTG+TGG | 0.547983 | tig0020520:+39191 | Msa1382540:three_prime_UTR |
AAATTTAGGAGTTGTCAAGA+TGG | 0.550659 | tig0020520:+36951 | Msa1382540:CDS |
ATCTTCATCACCAACAAACT+GGG | 0.552179 | tig0020520:-35832 | None:intergenic |
GGCTTGAGGAAGGCTGGAGA+AGG | 0.552278 | tig0020520:+38990 | Msa1382540:three_prime_UTR |
TTGATATTTCTTAAATGTGG+TGG | 0.556537 | tig0020520:+38857 | Msa1382540:three_prime_UTR |
GAAAGAAGAAGCTCTTCTCA+AGG | 0.556630 | tig0020520:-37022 | None:intergenic |
AAGCAGCCCGTTATAACCCC+GGG | 0.558730 | tig0020520:-38959 | None:intergenic |
GGATCCAAATGCACCTAAGA+GGG | 0.559964 | tig0020520:+38290 | Msa1382540:CDS |
ACATGGTGCACTAAAGCTCC+CGG | 0.562056 | tig0020520:-39238 | None:intergenic |
ATATCAAGTATCCCTTATCA+AGG | 0.563880 | tig0020520:+39160 | Msa1382540:three_prime_UTR |
AAAGAAGAAGCTCTTCTCAA+GGG | 0.564045 | tig0020520:-37021 | None:intergenic |
GTTCTTATCAAGTATCTGAT+CGG | 0.564175 | tig0020520:+39090 | Msa1382540:three_prime_UTR |
TCTCTTTCTCGCCACCATGA+CGG | 0.565013 | tig0020520:+33119 | Msa1382540:exon |
GTCTGCCCTTTCCGAATAGG+AGG | 0.565917 | tig0020520:-36456 | None:intergenic |
GTTCCAAAGACGAATCAACT+TGG | 0.567452 | tig0020520:+34457 | Msa1382540:CDS |
GACAAACTCACCTGAGCAGG+AGG | 0.567937 | tig0020520:-35858 | None:intergenic |
TGACACAACTGGAGCAAATG+AGG | 0.569007 | tig0020520:+35580 | Msa1382540:CDS |
ACCTTGGCCACACCAACAGT+TGG | 0.570641 | tig0020520:-37462 | None:intergenic |
GAGCGCATCAGAAATGAAGC+TGG | 0.571748 | tig0020520:+37525 | Msa1382540:CDS |
ATCATCATTCTCAAGCACCT+TGG | 0.580790 | tig0020520:-37478 | None:intergenic |
CTTGATCCTCCTATTCGGAA+AGG | 0.581438 | tig0020520:+36450 | Msa1382540:CDS |
TCAATACACAGCGGAGGAGA+AGG | 0.582588 | tig0020520:+38630 | Msa1382540:intron |
CACTTGATAAAGGGGCAACA+TGG | 0.585823 | tig0020520:-39255 | None:intergenic |
TTGTCTCTGCACACTGAGAG+AGG | 0.586134 | tig0020520:-33068 | None:intergenic |
AACGGGCGTAACATGGATGA+AGG | 0.587136 | tig0020520:+34435 | Msa1382540:CDS |
CTCTTCATGAAGAATAAGAG+TGG | 0.590015 | tig0020520:-37057 | None:intergenic |
ACTTGATAAGAACCACTAGC+AGG | 0.590226 | tig0020520:-39080 | None:intergenic |
TCTGTTACTGGGCGCAATTG+GGG | 0.591812 | tig0020520:+34803 | Msa1382540:CDS |
GGTAAGGACACTTGATAAAG+GGG | 0.594577 | tig0020520:-39263 | None:intergenic |
GATGAGCAGGGTCTAGAAAG+AGG | 0.595240 | tig0020520:-39216 | None:intergenic |
TCTCCCAAACAAACCTTCAA+GGG | 0.596624 | tig0020520:+35525 | Msa1382540:CDS |
ATCAATTGATGTTGATAAGG+CGG | 0.597783 | tig0020520:+34408 | Msa1382540:CDS |
CAAGCAGCCCGTTATAACCC+CGG | 0.597907 | tig0020520:-38960 | None:intergenic |
AACGATTTCAAAATCCAGTA+CGG | 0.603043 | tig0020520:+36228 | Msa1382540:CDS |
CGCATCAGAAATGAAGCTGG+TGG | 0.603857 | tig0020520:+37528 | Msa1382540:CDS |
CTAAAGCTCCCGGATGAGCA+GGG | 0.606043 | tig0020520:-39228 | None:intergenic |
GGACAAACCACGCAATATTG+TGG | 0.607048 | tig0020520:-36904 | None:intergenic |
TTATGGAAGAGACAGGGAGG+TGG | 0.608219 | tig0020520:+34382 | Msa1382540:CDS |
ATATTGCGTGGTTTGTCCGG+AGG | 0.609437 | tig0020520:+36909 | Msa1382540:CDS |
AAGAAGAAGCTCTTCTCAAG+GGG | 0.618644 | tig0020520:-37020 | None:intergenic |
TGTCTCTGCACACTGAGAGA+GGG | 0.619084 | tig0020520:-33067 | None:intergenic |
GGAATTTCATTTACGGACGT+GGG | 0.619820 | tig0020520:+38459 | Msa1382540:CDS |
TCAAAAGATGCTGATGACGA+AGG | 0.621100 | tig0020520:+38237 | Msa1382540:CDS |
GAGAGCTTACGGTGCCGCCA+CGG | 0.622395 | tig0020520:-33176 | None:intergenic |
GGTGGTATCTCCTATTGTAA+CGG | 0.623791 | tig0020520:+38875 | Msa1382540:three_prime_UTR |
TTGGTGTTCAGATCAAAGAT+GGG | 0.623826 | tig0020520:+34476 | Msa1382540:CDS |
CTCCCCAACAGTTACTCCGA+AGG | 0.624094 | tig0020520:-34771 | None:intergenic |
ACATACTGGTTACCTGCTAG+TGG | 0.626603 | tig0020520:+39068 | Msa1382540:three_prime_UTR |
TCATGAAGAATAAGAGTGGG+AGG | 0.627094 | tig0020520:-37053 | None:intergenic |
TTTGAGCGACATGCTGCTGG+TGG | 0.628138 | tig0020520:+37210 | Msa1382540:CDS |
GACTCTGATGCTAGCCAAAG+TGG | 0.628895 | tig0020520:+38046 | Msa1382540:CDS |
TGCCCAACCAACTGTTGGTG+TGG | 0.630617 | tig0020520:+37455 | Msa1382540:CDS |
GTTCTCGACAAGGATGATGG+AGG | 0.634483 | tig0020520:+37995 | Msa1382540:CDS |
GAAGAGATGACCGTCCGTCA+TGG | 0.634783 | tig0020520:-33133 | None:intergenic |
CCAAAGTGGTGGTGAGACAG+AGG | 0.637450 | tig0020520:+38060 | Msa1382540:CDS |
TATTGGTGCTGCAGAATCCG+GGG | 0.638125 | tig0020520:+34332 | Msa1382540:intron |
CTAATAATGACGAAGGTATG+CGG | 0.638553 | tig0020520:-36426 | None:intergenic |
GACGGAGAACTACCTGATCA+CGG | 0.641013 | tig0020520:-34522 | None:intergenic |
ATCAAGACTAATAATGACGA+AGG | 0.641692 | tig0020520:-36433 | None:intergenic |
TCTTCATGAAGAATAAGAGT+GGG | 0.642579 | tig0020520:-37056 | None:intergenic |
ATAATGTCTATGGCTGATGT+TGG | 0.645958 | tig0020520:+35968 | Msa1382540:CDS |
TTTCTCGCCACCATGACGGA+CGG | 0.646406 | tig0020520:+33123 | Msa1382540:exon |
GCGCTCGAGATGTGGATCGA+CGG | 0.648144 | tig0020520:-37508 | None:intergenic |
GTGTTTACCACAATATTGCG+TGG | 0.650738 | tig0020520:+36897 | Msa1382540:CDS |
GCTGATGCCCAACCAACTGT+TGG | 0.651825 | tig0020520:+37450 | Msa1382540:CDS |
TTACCTGCATCACGATATGA+GGG | 0.656286 | tig0020520:-36485 | None:intergenic |
AAAGATGCTGATGACGAAGG+AGG | 0.658535 | tig0020520:+38240 | Msa1382540:CDS |
TCTGCACCAGAATCATCAGT+AGG | 0.661015 | tig0020520:-38022 | None:intergenic |
CGTTACAAGGATGAGATGAG+TGG | 0.662650 | tig0020520:+38688 | Msa1382540:CDS |
CACCTTCGGAGTAACTGTTG+GGG | 0.674663 | tig0020520:+34769 | Msa1382540:CDS |
CAAAATCCAGTACGGCAGTG+TGG | 0.675240 | tig0020520:+36236 | Msa1382540:CDS |
GAGATGACCGTCCGTCATGG+TGG | 0.684087 | tig0020520:-33130 | None:intergenic |
ACAAACTCACCTGAGCAGGA+GGG | 0.692093 | tig0020520:-35857 | None:intergenic |
TGGTGGAGATGAAAGTGACG+AGG | 0.704697 | tig0020520:+37545 | Msa1382540:CDS |
TGTGATGTTGGAGTTTCACG+TGG | 0.716384 | tig0020520:+35556 | Msa1382540:CDS |
TTGAGTGTTCTATGTCCCCG+GGG | 0.746581 | tig0020520:+38943 | Msa1382540:three_prime_UTR |
TCTGATGCTAGCCAAAGTGG+TGG | 0.752107 | tig0020520:+38049 | Msa1382540:CDS |
TGGAGATGAAAGTGACGAGG+AGG | 0.754949 | tig0020520:+37548 | Msa1382540:CDS |
TTCAACAACATTACCCTCGG+CGG | 0.763342 | tig0020520:+33153 | Msa1382540:CDS |
GTATTGCAATCCTTACACCA+AGG | 0.765044 | tig0020520:+36026 | Msa1382540:CDS |
AGCAGCCCGTTATAACCCCG+GGG | 0.772409 | tig0020520:-38958 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGATTTATTGAAAAAAAAT+GGG | + | tig0020520:33462-33481 | Msa1382540:intron | 10.0% |
!!! | AAATATTAGAGTTTTTTTTA+TGG | + | tig0020520:37153-37172 | Msa1382540:intron | 10.0% |
!! | GTAGATTTATTGAAAAAAAA+TGG | + | tig0020520:33461-33480 | Msa1382540:intron | 15.0% |
!! | AAAATAATAATGAAAAGATG+AGG | + | tig0020520:34235-34254 | Msa1382540:intron | 15.0% |
!! | TACACTTATATTTGTATTAT+TGG | + | tig0020520:34315-34334 | Msa1382540:intron | 15.0% |
!!! | AAATATCTTTGAAAATAGTA+GGG | - | tig0020520:35019-35038 | None:intergenic | 15.0% |
!!! | TAAATATCTTTGAAAATAGT+AGG | - | tig0020520:35020-35039 | None:intergenic | 15.0% |
!!! | GGTATATATATATATAGTTT+TGG | + | tig0020520:35601-35620 | Msa1382540:intron | 15.0% |
!! | TATATTAAAAACAAAAAGCA+AGG | - | tig0020520:36299-36318 | None:intergenic | 15.0% |
!!! | TGCTTTTGTATATATTAAAT+TGG | + | tig0020520:37944-37963 | Msa1382540:intron | 15.0% |
!! | AAAAGGAATTACAAAAGTTA+GGG | - | tig0020520:33287-33306 | None:intergenic | 20.0% |
!! | AAAAAGGAATTACAAAAGTT+AGG | - | tig0020520:33288-33307 | None:intergenic | 20.0% |
!! | AAATTAGGGATTAACAAAAA+TGG | - | tig0020520:33360-33379 | None:intergenic | 20.0% |
!! | TTAAATATCCATCTAGTATT+AGG | + | tig0020520:33625-33644 | Msa1382540:intron | 20.0% |
!!! | ATAAGTTTTGTAAGACTATT+TGG | - | tig0020520:34112-34131 | None:intergenic | 20.0% |
!! | AACATGTAAATACATATTCA+GGG | - | tig0020520:34549-34568 | None:intergenic | 20.0% |
!! | AAACATGTAAATACATATTC+AGG | - | tig0020520:34550-34569 | None:intergenic | 20.0% |
!! | ATCAAACACATAAATTTACT+CGG | - | tig0020520:34920-34939 | None:intergenic | 20.0% |
!! | TAAAAATGGGTACAAAAAAA+CGG | - | tig0020520:35134-35153 | None:intergenic | 20.0% |
!! | AATAGAACCAACTTAAAAAT+GGG | - | tig0020520:35147-35166 | None:intergenic | 20.0% |
!! | AAATAGAACCAACTTAAAAA+TGG | - | tig0020520:35148-35167 | None:intergenic | 20.0% |
!!! | TAAGTTGGTTCTATTTTTTT+TGG | + | tig0020520:35152-35171 | Msa1382540:intron | 20.0% |
!!! | AAGTTGGTTCTATTTTTTTT+GGG | + | tig0020520:35153-35172 | Msa1382540:intron | 20.0% |
!! | GAAATGAAAATAGAAACATA+AGG | - | tig0020520:35443-35462 | None:intergenic | 20.0% |
!!! | TATGTTTCTATTTTCATTTC+AGG | + | tig0020520:35443-35462 | Msa1382540:intron | 20.0% |
!!! | TGACATTTGTAAAATCATTT+TGG | + | tig0020520:35924-35943 | Msa1382540:intron | 20.0% |
!!! | TGTAAAATCATTTTGGTATT+AGG | + | tig0020520:35931-35950 | Msa1382540:intron | 20.0% |
!! | TAATTCACTATTCAATAATC+AGG | + | tig0020520:36860-36879 | Msa1382540:intron | 20.0% |
!! | AATTCACTATTCAATAATCA+GGG | + | tig0020520:36861-36880 | Msa1382540:intron | 20.0% |
!! | ATTCATTTCTCTGAATATTT+CGG | - | tig0020520:37296-37315 | None:intergenic | 20.0% |
!!! | CAAATATGTGTGATAAATTT+TGG | - | tig0020520:37362-37381 | None:intergenic | 20.0% |
!! | AATATAATAGGCTAAGATTA+TGG | - | tig0020520:38572-38591 | None:intergenic | 20.0% |
!! | CACAAACACAAAAATATAAT+AGG | - | tig0020520:38584-38603 | None:intergenic | 20.0% |
!!! | GTTTTGATATTTCTTAAATG+TGG | + | tig0020520:38854-38873 | Msa1382540:three_prime_UTR | 20.0% |
!!! | AGGGTTTATGATTTTGAAAA+AGG | - | tig0020520:33304-33323 | None:intergenic | 25.0% |
! | AAATCATAAACCCTAATACT+AGG | + | tig0020520:33310-33329 | Msa1382540:intron | 25.0% |
! | AATCATAAACCCTAATACTA+GGG | + | tig0020520:33311-33330 | Msa1382540:intron | 25.0% |
!! | AATCACACTTTACACATTTT+TGG | - | tig0020520:33550-33569 | None:intergenic | 25.0% |
! | TGAAAACAACTTATGAACAA+TGG | + | tig0020520:33817-33836 | Msa1382540:intron | 25.0% |
! | CAGATAAAAATATATTCTGG+AGG | + | tig0020520:34355-34374 | Msa1382540:CDS | 25.0% |
!!! | TATATTCTGGAGGAATTTTA+TGG | + | tig0020520:34365-34384 | Msa1382540:CDS | 25.0% |
! | CAAATCAATTGATGTTGATA+AGG | + | tig0020520:34405-34424 | Msa1382540:CDS | 25.0% |
! | ACATGTAAATACATATTCAG+GGG | - | tig0020520:34548-34567 | None:intergenic | 25.0% |
!!! | CATGTTTTTGATGTTGAAAA+AGG | + | tig0020520:34563-34582 | Msa1382540:intron | 25.0% |
! | GAAAAAGGAATTCAATTGTT+TGG | + | tig0020520:34578-34597 | Msa1382540:intron | 25.0% |
!!! | ACGTTTTATACTTATTTTGC+AGG | + | tig0020520:34715-34734 | Msa1382540:intron | 25.0% |
! | GAGTAAATTTATGTGTTTGA+TGG | + | tig0020520:34919-34938 | Msa1382540:intron | 25.0% |
! | ATGTTTGACATCGTTTATAA+TGG | + | tig0020520:34947-34966 | Msa1382540:intron | 25.0% |
!! | AATTACCCTGAATTTTACAA+AGG | - | tig0020520:35078-35097 | None:intergenic | 25.0% |
! | TTCCTTATAAAAAGAAACAC+CGG | + | tig0020520:35097-35116 | Msa1382540:intron | 25.0% |
!!! | TTTTGTACCCATTTTTAAGT+TGG | + | tig0020520:35137-35156 | Msa1382540:intron | 25.0% |
! | TCTAATGAATTGATACAGTT+TGG | + | tig0020520:35628-35647 | Msa1382540:intron | 25.0% |
!!! | TTTTGGAATTGCGTTTTTTA+TGG | + | tig0020520:35735-35754 | Msa1382540:intron | 25.0% |
! | ATCTTGTTACAGCAAATTAT+AGG | + | tig0020520:35897-35916 | Msa1382540:intron | 25.0% |
!!! | CCATAGACATTATTTTATCA+CGG | - | tig0020520:35961-35980 | None:intergenic | 25.0% |
!! | AGATCAATCTTTTTCTTGAA+AGG | - | tig0020520:36129-36148 | None:intergenic | 25.0% |
!!! | AATTACACTTGTCATTTTTG+CGG | + | tig0020520:36190-36209 | Msa1382540:CDS | 25.0% |
! | AAACCTTAGGAAGTAAAAAT+AGG | - | tig0020520:36266-36285 | None:intergenic | 25.0% |
! | AAAAACAAAAAGCAAGGATT+AGG | - | tig0020520:36293-36312 | None:intergenic | 25.0% |
! | AAAGAATCAATTTACATGTG+TGG | - | tig0020520:36335-36354 | None:intergenic | 25.0% |
!!! | TGTAAATTGATTCTTTTCTC+TGG | + | tig0020520:36339-36358 | Msa1382540:intron | 25.0% |
!!! | TTGACTAAACTGTTGATAAT+TGG | + | tig0020520:36697-36716 | Msa1382540:intron | 25.0% |
!!! | TGACTAAACTGTTGATAATT+GGG | + | tig0020520:36698-36717 | Msa1382540:intron | 25.0% |
! | ATTCACTATTCAATAATCAG+GGG | + | tig0020520:36862-36881 | Msa1382540:intron | 25.0% |
!! | GAAACTAACATTTGGTATTT+TGG | - | tig0020520:37110-37129 | None:intergenic | 25.0% |
!! | AAATACCAAATGTTAGTTTC+TGG | + | tig0020520:37110-37129 | Msa1382540:intron | 25.0% |
! | AATGAATACCACAATTTGTA+TGG | + | tig0020520:37309-37328 | Msa1382540:CDS | 25.0% |
! | TGATAAAACCATACAAATTG+TGG | - | tig0020520:37320-37339 | None:intergenic | 25.0% |
!!! | ACAATTTGTATGGTTTTATC+AGG | + | tig0020520:37319-37338 | Msa1382540:CDS | 25.0% |
! | TGTTCTAATTTAAGTGATTG+AGG | + | tig0020520:37646-37665 | Msa1382540:intron | 25.0% |
! | TAGATATATTCAAATGAGGT+TGG | - | tig0020520:37691-37710 | None:intergenic | 25.0% |
! | TGCTTAGATATATTCAAATG+AGG | - | tig0020520:37695-37714 | None:intergenic | 25.0% |
! | AATCTAAAGAAAACTAATCC+TGG | + | tig0020520:38438-38457 | Msa1382540:CDS | 25.0% |
! | TAATCCTGGAATTTCATTTA+CGG | + | tig0020520:38452-38471 | Msa1382540:CDS | 25.0% |
! | AGAAAAATGGAAAAATCTGT+CGG | + | tig0020520:38494-38513 | Msa1382540:CDS | 25.0% |
! | TTTCCTGAATCAATATTCAT+GGG | - | tig0020520:38733-38752 | None:intergenic | 25.0% |
! | ATTTCCTGAATCAATATTCA+TGG | - | tig0020520:38734-38753 | None:intergenic | 25.0% |
! | ATTAATATTAAGGCAACCTT+AGG | - | tig0020520:38770-38789 | None:intergenic | 25.0% |
! | TAAGGTTGCCTTAATATTAA+TGG | + | tig0020520:38769-38788 | Msa1382540:exon | 25.0% |
! | TTGATATTTCTTAAATGTGG+TGG | + | tig0020520:38857-38876 | Msa1382540:three_prime_UTR | 25.0% |
! | GTAATTCAGTAATAACATAC+TGG | + | tig0020520:39054-39073 | Msa1382540:three_prime_UTR | 25.0% |
GGTTATTCAAAAAGAGGAAA+TGG | - | tig0020520:33266-33285 | None:intergenic | 30.0% | |
AGTTAGGGTTATTCAAAAAG+AGG | - | tig0020520:33272-33291 | None:intergenic | 30.0% | |
TAGAGAAAACCCTAGTATTA+GGG | - | tig0020520:33323-33342 | None:intergenic | 30.0% | |
ATAGAGAAAACCCTAGTATT+AGG | - | tig0020520:33324-33343 | None:intergenic | 30.0% | |
ACAAATTGCACACAATAACT+AGG | - | tig0020520:33605-33624 | None:intergenic | 30.0% | |
ATAAGCTGATTATCCAAACA+GGG | - | tig0020520:33651-33670 | None:intergenic | 30.0% | |
TAAGCGCATATCATGATAAA+TGG | - | tig0020520:33692-33711 | None:intergenic | 30.0% | |
GCTGTTTATGTATGCTATAT+TGG | + | tig0020520:33775-33794 | Msa1382540:intron | 30.0% | |
! | AAAACAATTCAGCGTTTTGT+GGG | - | tig0020520:33854-33873 | None:intergenic | 30.0% |
GCTGTTTATGTATGCTATAT+TGG | + | tig0020520:33775-33794 | Msa1382540:intron | 30.0% | |
!! | TCAACTAACGTAAGTTTTGT+GGG | - | tig0020520:33967-33986 | None:intergenic | 30.0% |
! | ATCAACTAACGTAAGTTTTG+TGG | - | tig0020520:33968-33987 | None:intergenic | 30.0% |
! | AGTGTTTTCATTAGCTATCT+TGG | + | tig0020520:34020-34039 | Msa1382540:intron | 30.0% |
!! | GAATATATTTTTATCTGCCC+CGG | - | tig0020520:34352-34371 | None:intergenic | 30.0% |
GGGCAGATAAAAATATATTC+TGG | + | tig0020520:34352-34371 | Msa1382540:CDS | 30.0% | |
! | ATCAATTGATGTTGATAAGG+CGG | + | tig0020520:34408-34427 | Msa1382540:CDS | 30.0% |
CATGTAAATACATATTCAGG+GGG | - | tig0020520:34547-34566 | None:intergenic | 30.0% | |
AGGAATTCAATTGTTTGGTT+TGG | + | tig0020520:34583-34602 | Msa1382540:intron | 30.0% | |
! | TTGGTCAAAGTGTTAATCAA+AGG | - | tig0020520:34634-34653 | None:intergenic | 30.0% |
CAAATCATCAACGTTTAGAT+TGG | - | tig0020520:34653-34672 | None:intergenic | 30.0% | |
!! | CAATCTAAACGTTGATGATT+TGG | + | tig0020520:34651-34670 | Msa1382540:intron | 30.0% |
!! | AAACGTTGATGATTTGGATT+TGG | + | tig0020520:34657-34676 | Msa1382540:intron | 30.0% |
TAAGTATAAAACGTCAACAC+AGG | - | tig0020520:34709-34728 | None:intergenic | 30.0% | |
AAATTTACTCGGAGTATAGT+AGG | - | tig0020520:34909-34928 | None:intergenic | 30.0% | |
CACTCAAAATACAAACTGAA+TGG | - | tig0020520:35050-35069 | None:intergenic | 30.0% | |
TCCTTATAAAAAGAAACACC+GGG | + | tig0020520:35098-35117 | Msa1382540:intron | 30.0% | |
AAAGTGAGAAGTTGTTAAGA+TGG | + | tig0020520:35245-35264 | Msa1382540:intron | 30.0% | |
AAGTTGTTAAGATGGAAATG+TGG | + | tig0020520:35253-35272 | Msa1382540:intron | 30.0% | |
AGTTGTTAAGATGGAAATGT+GGG | + | tig0020520:35254-35273 | Msa1382540:intron | 30.0% | |
!!! | AAATGTGGGTTCTTTTTTTC+AGG | + | tig0020520:35268-35287 | Msa1382540:intron | 30.0% |
!!! | AATGTGGGTTCTTTTTTTCA+GGG | + | tig0020520:35269-35288 | Msa1382540:intron | 30.0% |
TCAAAAAGATCCACCATAAA+GGG | - | tig0020520:35373-35392 | None:intergenic | 30.0% | |
ATCAAAAAGATCCACCATAA+AGG | - | tig0020520:35374-35393 | None:intergenic | 30.0% | |
!!! | TTTATGGTGGATCTTTTTGA+TGG | + | tig0020520:35373-35392 | Msa1382540:intron | 30.0% |
TTTCATTTCAGGAAATATGC+TGG | + | tig0020520:35454-35473 | Msa1382540:intron | 30.0% | |
ATCTCAGAAAGATTCTTTGA+TGG | + | tig0020520:35779-35798 | Msa1382540:intron | 30.0% | |
CCGTGATAAAATAATGTCTA+TGG | + | tig0020520:35958-35977 | Msa1382540:CDS | 30.0% | |
TGTTGTACAATACATTACCT+TGG | - | tig0020520:36046-36065 | None:intergenic | 30.0% | |
! | AAATTTGCTTTATTGTGCAG+AGG | + | tig0020520:36153-36172 | Msa1382540:intron | 30.0% |
AACGATTTCAAAATCCAGTA+CGG | + | tig0020520:36228-36247 | Msa1382540:CDS | 30.0% | |
ATCAAGACTAATAATGACGA+AGG | - | tig0020520:36436-36455 | None:intergenic | 30.0% | |
! | GATATACATTTTGCTTGCTT+CGG | + | tig0020520:36546-36565 | Msa1382540:intron | 30.0% |
! | GTAGTTTGAAACTGATTATG+TGG | + | tig0020520:36597-36616 | Msa1382540:intron | 30.0% |
TTATGTGGTTGAAAGTGAAT+TGG | + | tig0020520:36612-36631 | Msa1382540:CDS | 30.0% | |
!!! | AAGGGCATATTTTAGTTGAT+TGG | + | tig0020520:36775-36794 | Msa1382540:intron | 30.0% |
!!! | GCATATTTTAGTTGATTGGT+TGG | + | tig0020520:36779-36798 | Msa1382540:intron | 30.0% |
ATATTGTGGTAAACACTTCA+TGG | - | tig0020520:36893-36912 | None:intergenic | 30.0% | |
AAATTTAGGAGTTGTCAAGA+TGG | + | tig0020520:36951-36970 | Msa1382540:CDS | 30.0% | |
ATCAACCAGAAACTAACATT+TGG | - | tig0020520:37118-37137 | None:intergenic | 30.0% | |
ATAGTCAATCTAGTAGGAAA+TGG | - | tig0020520:37184-37203 | None:intergenic | 30.0% | |
! | CTTTATTCATGAGTAGCTTT+TGG | + | tig0020520:37615-37634 | Msa1382540:intron | 30.0% |
! | GTCTACTTACATTTCAGTTT+TGG | + | tig0020520:37746-37765 | Msa1382540:intron | 30.0% |
AATTGGTGTAAAATGTCTAC+AGG | + | tig0020520:37961-37980 | Msa1382540:intron | 30.0% | |
ACCTCTACTCTTTAAATCTT+TGG | + | tig0020520:38117-38136 | Msa1382540:intron | 30.0% | |
ACCAAAGATTTAAAGAGTAG+AGG | - | tig0020520:38121-38140 | None:intergenic | 30.0% | |
GAAGAAACAGAAGAAGAAAA+AGG | + | tig0020520:38269-38288 | Msa1382540:CDS | 30.0% | |
! | TTTCATGTTCTTTTCTCAGA+TGG | + | tig0020520:38323-38342 | Msa1382540:CDS | 30.0% |
GTACATACATATTAGTGATG+TGG | + | tig0020520:38368-38387 | Msa1382540:intron | 30.0% | |
GAAAAATGGAAAAATCTGTC+GGG | + | tig0020520:38495-38514 | Msa1382540:CDS | 30.0% | |
ATGGAACTGCAATGAAATAA+TGG | - | tig0020520:38533-38552 | None:intergenic | 30.0% | |
ATGCAAAGAAACAGAAAACT+TGG | - | tig0020520:38608-38627 | None:intergenic | 30.0% | |
!! | GTAACGCTTTTTATCTTCTT+GGG | - | tig0020520:38674-38693 | None:intergenic | 30.0% |
!! | TGTAACGCTTTTTATCTTCT+TGG | - | tig0020520:38675-38694 | None:intergenic | 30.0% |
!! | AGAAGATAAAAAGCGTTACA+AGG | + | tig0020520:38675-38694 | Msa1382540:CDS | 30.0% |
CGGGAATACCATTAATATTA+AGG | - | tig0020520:38780-38799 | None:intergenic | 30.0% | |
GTTCTTATCAAGTATCTGAT+CGG | + | tig0020520:39090-39109 | Msa1382540:three_prime_UTR | 30.0% | |
ATATCAAGTATCCCTTATCA+AGG | + | tig0020520:39160-39179 | Msa1382540:three_prime_UTR | 30.0% | |
ATGCAATACACCAAAATTGT+GGG | + | tig0020520:39192-39211 | Msa1382540:three_prime_UTR | 30.0% | |
TAAGAAGGGGAAAAAAGATT+TGG | - | tig0020520:39287-39306 | None:intergenic | 30.0% | |
TGAGGAAAGAAGATCGAAAA+TGG | - | tig0020520:33235-33254 | None:intergenic | 35.0% | |
TCAAAAAGAGGAAATGGTGA+AGG | - | tig0020520:33260-33279 | None:intergenic | 35.0% | |
! | ACAATAACTAGGTTTGAAGC+TGG | - | tig0020520:33594-33613 | None:intergenic | 35.0% |
GATAAGCTGATTATCCAAAC+AGG | - | tig0020520:33652-33671 | None:intergenic | 35.0% | |
! | GAAAACAATTCAGCGTTTTG+TGG | - | tig0020520:33855-33874 | None:intergenic | 35.0% |
TCATTAGCTGTTATGTGTCA+AGG | + | tig0020520:34180-34199 | Msa1382540:intron | 35.0% | |
! | AGGAATTTTATGGAAGAGAC+AGG | + | tig0020520:34375-34394 | Msa1382540:CDS | 35.0% |
! | GGAATTTTATGGAAGAGACA+GGG | + | tig0020520:34376-34395 | Msa1382540:CDS | 35.0% |
! | TTGGTGTTCAGATCAAAGAT+GGG | + | tig0020520:34476-34495 | Msa1382540:CDS | 35.0% |
TAAATACATATTCAGGGGGA+CGG | - | tig0020520:34543-34562 | None:intergenic | 35.0% | |
!! | TTCAATTGTTTGGTTTGGCT+TGG | + | tig0020520:34588-34607 | Msa1382540:intron | 35.0% |
AGTTTCTTCCAAAACACCTT+CGG | + | tig0020520:34755-34774 | Msa1382540:CDS | 35.0% | |
AGAAGCAACTTTCTGTTACT+GGG | + | tig0020520:34792-34811 | Msa1382540:CDS | 35.0% | |
! | TACCCTGAATTTTACAAAGG+CGG | - | tig0020520:35075-35094 | None:intergenic | 35.0% |
TGATGTAACAACCAGATTGA+AGG | - | tig0020520:35214-35233 | None:intergenic | 35.0% | |
TTCATTCATGCTTTCTTCTC+TGG | + | tig0020520:35328-35347 | Msa1382540:intron | 35.0% | |
AAATGCAGTCTTTCCCTTTA+TGG | + | tig0020520:35357-35376 | Msa1382540:intron | 35.0% | |
!! | CTGACTTGACTGCTTTTATA+CGG | + | tig0020520:35398-35417 | Msa1382540:intron | 35.0% |
! | TTTCCCTTGAAGGTTTGTTT+GGG | - | tig0020520:35531-35550 | None:intergenic | 35.0% |
!! | TTTTCCCTTGAAGGTTTGTT+TGG | - | tig0020520:35532-35551 | None:intergenic | 35.0% |
!! | TCACATCATTTTTCCCTTGA+AGG | - | tig0020520:35541-35560 | None:intergenic | 35.0% |
AGGGAAAAATGATGTGATGT+TGG | + | tig0020520:35544-35563 | Msa1382540:CDS | 35.0% | |
ATACTATTCAAGCCCAAGTT+TGG | - | tig0020520:35691-35710 | None:intergenic | 35.0% | |
TTGGGCTTGAATAGTATTGT+AGG | + | tig0020520:35694-35713 | Msa1382540:intron | 35.0% | |
TATTGTAGGCTGCAGTTAAT+AGG | + | tig0020520:35708-35727 | Msa1382540:intron | 35.0% | |
! | TGCAGTTAATAGGCTCATTT+TGG | + | tig0020520:35718-35737 | Msa1382540:intron | 35.0% |
ATCTTCATCACCAACAAACT+GGG | - | tig0020520:35835-35854 | None:intergenic | 35.0% | |
ATAATGTCTATGGCTGATGT+TGG | + | tig0020520:35968-35987 | Msa1382540:CDS | 35.0% | |
AGATGCTGTTGTTACATTTG+AGG | + | tig0020520:36003-36022 | Msa1382540:CDS | 35.0% | |
GATGCTGTTGTTACATTTGA+GGG | + | tig0020520:36004-36023 | Msa1382540:CDS | 35.0% | |
! | CAATACATTACCTTGGTGTA+AGG | - | tig0020520:36039-36058 | None:intergenic | 35.0% |
!!! | TCGCCTATTTTTACTTCCTA+AGG | + | tig0020520:36260-36279 | Msa1382540:CDS | 35.0% |
AGGATTAGGAGATAAACCTT+AGG | - | tig0020520:36279-36298 | None:intergenic | 35.0% | |
! | CTAATAATGACGAAGGTATG+CGG | - | tig0020520:36429-36448 | None:intergenic | 35.0% |
!! | TTAGTCTTGATCCTCCTATT+CGG | + | tig0020520:36445-36464 | Msa1382540:CDS | 35.0% |
! | CAGGTAATGTTTTACTTCGT+TGG | + | tig0020520:36501-36520 | Msa1382540:intron | 35.0% |
CAGTTTCAAACTACACAGAA+AGG | - | tig0020520:36591-36610 | None:intergenic | 35.0% | |
CTCAAAGTACAAAGACAAGT+TGG | + | tig0020520:36657-36676 | Msa1382540:CDS | 35.0% | |
!! | AGCTGCTTTGGAAATGAAAA+AGG | + | tig0020520:36756-36775 | Msa1382540:intron | 35.0% |
!! | GCTGCTTTGGAAATGAAAAA+GGG | + | tig0020520:36757-36776 | Msa1382540:intron | 35.0% |
TTACCAAGCCTGGAAAATTT+AGG | + | tig0020520:36937-36956 | Msa1382540:CDS | 35.0% | |
! | TGACAACTCCTAAATTTTCC+AGG | - | tig0020520:36948-36967 | None:intergenic | 35.0% |
! | TCATCTTTGAAAGCTGAAGA+TGG | + | tig0020520:36987-37006 | Msa1382540:CDS | 35.0% |
AAAGAAGAAGCTCTTCTCAA+GGG | - | tig0020520:37024-37043 | None:intergenic | 35.0% | |
TTCCTACTAGATTGACTATG+TGG | + | tig0020520:37185-37204 | Msa1382540:intron | 35.0% | |
TTCCACATAGTCAATCTAGT+AGG | - | tig0020520:37190-37209 | None:intergenic | 35.0% | |
CAGATTTGAGTCTGATAAGA+AGG | - | tig0020520:37257-37276 | None:intergenic | 35.0% | |
CAAGTAGTCAAGTACAGATT+AGG | - | tig0020520:37576-37595 | None:intergenic | 35.0% | |
GCTACTCATGAATAAAGAAG+AGG | - | tig0020520:37612-37631 | None:intergenic | 35.0% | |
! | TTCAGATTTTGTTCTCGACA+AGG | + | tig0020520:37985-38004 | Msa1382540:CDS | 35.0% |
AGATTTAAAGAGTAGAGGTG+AGG | - | tig0020520:38116-38135 | None:intergenic | 35.0% | |
! | TGGTCATCATTAAGGTGTTA+CGG | - | tig0020520:38146-38165 | None:intergenic | 35.0% |
TTAGAAGGCAAATCCTTCTT+TGG | - | tig0020520:38195-38214 | None:intergenic | 35.0% | |
AAAGAAGGATTTGCCTTCTA+AGG | + | tig0020520:38194-38213 | Msa1382540:CDS | 35.0% | |
TTAGAAGTAGATGCCTTAGA+AGG | - | tig0020520:38210-38229 | None:intergenic | 35.0% | |
!! | GAAGAGTACTTGGAGAAAAA+TGG | + | tig0020520:38481-38500 | Msa1382540:CDS | 35.0% |
TTTGCATGTTCAATACACAG+CGG | + | tig0020520:38621-38640 | Msa1382540:intron | 35.0% | |
! | CTTTTTATCTTCTTGGGCTT+TGG | - | tig0020520:38668-38687 | None:intergenic | 35.0% |
! | GAATCAATATTCATGGGTTG+AGG | - | tig0020520:38727-38746 | None:intergenic | 35.0% |
!! | CAACCCATGAATATTGATTC+AGG | + | tig0020520:38727-38746 | Msa1382540:CDS | 35.0% |
!! | TGTCGATTTACCGTTACAAT+AGG | - | tig0020520:38888-38907 | None:intergenic | 35.0% |
! | GGTAAATCGACAGAGTTTTA+TGG | + | tig0020520:38896-38915 | Msa1382540:three_prime_UTR | 35.0% |
AAGTATCCCTTATCAAGGTA+TGG | + | tig0020520:39165-39184 | Msa1382540:three_prime_UTR | 35.0% | |
CATGCAATACACCAAAATTG+TGG | + | tig0020520:39191-39210 | Msa1382540:three_prime_UTR | 35.0% | |
TGGTAAGGACACTTGATAAA+GGG | - | tig0020520:39267-39286 | None:intergenic | 35.0% | |
TTGGTAAGGACACTTGATAA+AGG | - | tig0020520:39268-39287 | None:intergenic | 35.0% | |
! | AGGGGAAAAAAGATTTGGTA+AGG | - | tig0020520:39282-39301 | None:intergenic | 35.0% |
CTCTTCAACAACATTACCCT+CGG | + | tig0020520:33150-33169 | Msa1382540:CDS | 40.0% | |
AAACAGGGCCTAATACTAGA+TGG | - | tig0020520:33636-33655 | None:intergenic | 40.0% | |
ATCTAGTATTAGGCCCTGTT+TGG | + | tig0020520:33635-33654 | Msa1382540:intron | 40.0% | |
! | TGAAACACTCAGAGCTTGTT+TGG | - | tig0020520:34163-34182 | None:intergenic | 40.0% |
!! | ATTATTGGTGCTGCAGAATC+CGG | + | tig0020520:34330-34349 | Msa1382540:intron | 40.0% |
! | ATTTTATGGAAGAGACAGGG+AGG | + | tig0020520:34379-34398 | Msa1382540:CDS | 40.0% |
! | TGTTGATAAGGCGGACATAA+CGG | + | tig0020520:34417-34436 | Msa1382540:CDS | 40.0% |
GTTCCAAAGACGAATCAACT+TGG | + | tig0020520:34457-34476 | Msa1382540:CDS | 40.0% | |
!! | ACACCAAGTTGATTCGTCTT+TGG | - | tig0020520:34463-34482 | None:intergenic | 40.0% |
!! | CTTGGTGTTCAGATCAAAGA+TGG | + | tig0020520:34475-34494 | Msa1382540:CDS | 40.0% |
GGGTTGTTCTACAAATTCAC+TGG | + | tig0020520:34496-34515 | Msa1382540:CDS | 40.0% | |
!! | TTGTTTGGTTTGGCTTGGTT+TGG | + | tig0020520:34593-34612 | Msa1382540:intron | 40.0% |
GAGAAGCAACTTTCTGTTAC+TGG | + | tig0020520:34791-34810 | Msa1382540:CDS | 40.0% | |
! | TGGGGAGAAGTTGATCTAAA+CGG | + | tig0020520:34821-34840 | Msa1382540:CDS | 40.0% |
! | GAGAAGTTGATCTAAACGGT+TGG | + | tig0020520:34825-34844 | Msa1382540:intron | 40.0% |
CACCGCCTTTGTAAAATTCA+GGG | + | tig0020520:35070-35089 | Msa1382540:intron | 40.0% | |
! | GCCCGGTGTTTCTTTTTATA+AGG | - | tig0020520:35102-35121 | None:intergenic | 40.0% |
AACAACCAGATTGAAGGTAG+TGG | - | tig0020520:35208-35227 | None:intergenic | 40.0% | |
!!! | TGGGTTCTTTTTTTCAGGGT+GGG | + | tig0020520:35273-35292 | Msa1382540:intron | 40.0% |
TTATACGGCTATACTACCAG+TGG | + | tig0020520:35413-35432 | Msa1382540:intron | 40.0% | |
AGAAACATAAGGACATCCAC+TGG | - | tig0020520:35432-35451 | None:intergenic | 40.0% | |
!! | AGGAAATATGCTGGCTTTCA+TGG | + | tig0020520:35463-35482 | Msa1382540:intron | 40.0% |
!! | AATATGCTGGCTTTCATGGT+TGG | + | tig0020520:35467-35486 | Msa1382540:CDS | 40.0% |
! | TGGTTCAAAGCAAGCTTTTG+AGG | + | tig0020520:35487-35506 | Msa1382540:CDS | 40.0% |
TCTCCCAAACAAACCTTCAA+GGG | + | tig0020520:35525-35544 | Msa1382540:CDS | 40.0% | |
AAACCTTCCTCATCCAAACT+TGG | + | tig0020520:35675-35694 | Msa1382540:intron | 40.0% | |
AACCTTCCTCATCCAAACTT+GGG | + | tig0020520:35676-35695 | Msa1382540:intron | 40.0% | |
!! | ACAAACTGGGTATTGGAACT+TGG | - | tig0020520:35822-35841 | None:intergenic | 40.0% |
AGTTCCAATACCCAGTTTGT+TGG | + | tig0020520:35822-35841 | Msa1382540:CDS | 40.0% | |
ATCACCAACAAACTGGGTAT+TGG | - | tig0020520:35829-35848 | None:intergenic | 40.0% | |
GATCTTCATCACCAACAAAC+TGG | - | tig0020520:35836-35855 | None:intergenic | 40.0% | |
GTATTGCAATCCTTACACCA+AGG | + | tig0020520:36026-36045 | Msa1382540:CDS | 40.0% | |
!!! | TTGTCATTTTTGCGGCTTCA+GGG | + | tig0020520:36198-36217 | Msa1382540:CDS | 40.0% |
TGACAGCTTATCATGTCTGT+TGG | + | tig0020520:36378-36397 | Msa1382540:intron | 40.0% | |
TTGATCCTCCTATTCGGAAA+GGG | + | tig0020520:36451-36470 | Msa1382540:CDS | 40.0% | |
TTACCTGCATCACGATATGA+GGG | - | tig0020520:36488-36507 | None:intergenic | 40.0% | |
ATTACCTGCATCACGATATG+AGG | - | tig0020520:36489-36508 | None:intergenic | 40.0% | |
! | GAAAGGAGCACAACATTGTT+AGG | - | tig0020520:36574-36593 | None:intergenic | 40.0% |
! | GATTGGTTGGTGTGAGAATT+TGG | + | tig0020520:36792-36811 | Msa1382540:intron | 40.0% |
! | TGTGAGAATTTGGTAACTCG+TGG | + | tig0020520:36802-36821 | Msa1382540:intron | 40.0% |
! | GTGAGAATTTGGTAACTCGT+GGG | + | tig0020520:36803-36822 | Msa1382540:intron | 40.0% |
GTGTTTACCACAATATTGCG+TGG | + | tig0020520:36897-36916 | Msa1382540:CDS | 40.0% | |
! | ACAATATTGCGTGGTTTGTC+CGG | + | tig0020520:36906-36925 | Msa1382540:CDS | 40.0% |
! | ACTCCTAAATTTTCCAGGCT+TGG | - | tig0020520:36943-36962 | None:intergenic | 40.0% |
AAGAAGAAGCTCTTCTCAAG+GGG | - | tig0020520:37023-37042 | None:intergenic | 40.0% | |
GAAAGAAGAAGCTCTTCTCA+AGG | - | tig0020520:37025-37044 | None:intergenic | 40.0% | |
TGGTTATCAGCAAAAGCAAC+TGG | - | tig0020520:37090-37109 | None:intergenic | 40.0% | |
ATCATCATTCTCAAGCACCT+TGG | - | tig0020520:37481-37500 | None:intergenic | 40.0% | |
AAAGGGATAGATGGACAAAC+AGG | - | tig0020520:37817-37836 | None:intergenic | 40.0% | |
GACAAACTGAAAGGGATAGA+TGG | - | tig0020520:37826-37845 | None:intergenic | 40.0% | |
! | GAGAGCATGACAAACTGAAA+GGG | - | tig0020520:37834-37853 | None:intergenic | 40.0% |
! | AGAGAGCATGACAAACTGAA+AGG | - | tig0020520:37835-37854 | None:intergenic | 40.0% |
CTCTGTATTGCTTACTGTTG+TGG | + | tig0020520:37851-37870 | Msa1382540:intron | 40.0% | |
TGTCATATGCGTATGTCTTG+TGG | + | tig0020520:37883-37902 | Msa1382540:intron | 40.0% | |
GTCATATGCGTATGTCTTGT+GGG | + | tig0020520:37884-37903 | Msa1382540:intron | 40.0% | |
TTTGTTCTCGACAAGGATGA+TGG | + | tig0020520:37992-38011 | Msa1382540:CDS | 40.0% | |
! | CTGGAAGTTGGTCATCATTA+AGG | - | tig0020520:38154-38173 | None:intergenic | 40.0% |
! | ATCCTTCTTTGGTTCCTTCT+TGG | - | tig0020520:38184-38203 | None:intergenic | 40.0% |
! | TCAAAAGATGCTGATGACGA+AGG | + | tig0020520:38237-38256 | Msa1382540:CDS | 40.0% |
! | CTTTTCTCAGATGGAAAGAG+AGG | + | tig0020520:38332-38351 | Msa1382540:CDS | 40.0% |
ACGTCCGTAAATGAAATTCC+AGG | - | tig0020520:38459-38478 | None:intergenic | 40.0% | |
TGGAATTTCATTTACGGACG+TGG | + | tig0020520:38458-38477 | Msa1382540:CDS | 40.0% | |
GGAATTTCATTTACGGACGT+GGG | + | tig0020520:38459-38478 | Msa1382540:CDS | 40.0% | |
ATGGAAAAATCTGTCGGGTA+TGG | + | tig0020520:38500-38519 | Msa1382540:CDS | 40.0% | |
TGGTCACAAATGACACTAGA+TGG | - | tig0020520:38552-38571 | None:intergenic | 40.0% | |
AATGAATCTGACAGTGCCTA+AGG | + | tig0020520:38751-38770 | Msa1382540:CDS | 40.0% | |
TAATGGTATTCCCGATTGCT+TGG | + | tig0020520:38786-38805 | Msa1382540:three_prime_UTR | 40.0% | |
TAAAACTGCAGCCAAGCAAT+CGG | - | tig0020520:38800-38819 | None:intergenic | 40.0% | |
GGTGGTATCTCCTATTGTAA+CGG | + | tig0020520:38875-38894 | Msa1382540:three_prime_UTR | 40.0% | |
TTGTTTGAATGGCTTGAGGA+AGG | + | tig0020520:38980-38999 | Msa1382540:three_prime_UTR | 40.0% | |
ACTTGATAAGAACCACTAGC+AGG | - | tig0020520:39083-39102 | None:intergenic | 40.0% | |
ATGCAGCCATACCTTGATAA+GGG | - | tig0020520:39174-39193 | None:intergenic | 40.0% | |
! | AGAAAGAGGTCCCACAATTT+TGG | - | tig0020520:39205-39224 | None:intergenic | 40.0% |
GGTAAGGACACTTGATAAAG+GGG | - | tig0020520:39266-39285 | None:intergenic | 40.0% | |
TTCAACAACATTACCCTCGG+CGG | + | tig0020520:33153-33172 | Msa1382540:CDS | 45.0% | |
AGAGAGAGAGAGAGAGCTTA+CGG | - | tig0020520:33190-33209 | None:intergenic | 45.0% | |
GAGGAAATGGTGAAGGTTTG+AGG | - | tig0020520:33253-33272 | None:intergenic | 45.0% | |
! | CACTCAGAGCTTGTTTGGAT+TGG | - | tig0020520:34158-34177 | None:intergenic | 45.0% |
!! | TTATTGGTGCTGCAGAATCC+GGG | + | tig0020520:34331-34350 | Msa1382540:intron | 45.0% |
! | GTTGATAAGGCGGACATAAC+GGG | + | tig0020520:34418-34437 | Msa1382540:CDS | 45.0% |
!! | ATTCACTGGTTTCCGTGATC+AGG | + | tig0020520:34510-34529 | Msa1382540:CDS | 45.0% |
!!! | CAGTTACTCCGAAGGTGTTT+TGG | - | tig0020520:34766-34785 | None:intergenic | 45.0% |
AACACCTTCGGAGTAACTGT+TGG | + | tig0020520:34767-34786 | Msa1382540:CDS | 45.0% | |
ACACCTTCGGAGTAACTGTT+GGG | + | tig0020520:34768-34787 | Msa1382540:CDS | 45.0% | |
TTTCTGTTACTGGGCGCAAT+TGG | + | tig0020520:34801-34820 | Msa1382540:CDS | 45.0% | |
TTCTGTTACTGGGCGCAATT+GGG | + | tig0020520:34802-34821 | Msa1382540:CDS | 45.0% | |
ATGGCAGCATCATGAAGACA+TGG | + | tig0020520:34966-34985 | Msa1382540:intron | 45.0% | |
GCACCGCCTTTGTAAAATTC+AGG | + | tig0020520:35069-35088 | Msa1382540:intron | 45.0% | |
AAAAACGGCAGATAACTGCC+CGG | - | tig0020520:35119-35138 | None:intergenic | 45.0% | |
AAGCACCACTACCTTCAATC+TGG | + | tig0020520:35200-35219 | Msa1382540:intron | 45.0% | |
!!! | GTGGGTTCTTTTTTTCAGGG+TGG | + | tig0020520:35272-35291 | Msa1382540:intron | 45.0% |
!!! | GGGTTCTTTTTTTCAGGGTG+GGG | + | tig0020520:35274-35293 | Msa1382540:intron | 45.0% |
!!! | TCTTTTTTTCAGGGTGGGGA+TGG | + | tig0020520:35278-35297 | Msa1382540:intron | 45.0% |
!!! | CTTTTTTTCAGGGTGGGGAT+GGG | + | tig0020520:35279-35298 | Msa1382540:intron | 45.0% |
!!! | TTTTTTTCAGGGTGGGGATG+GGG | + | tig0020520:35280-35299 | Msa1382540:intron | 45.0% |
! | ATGGGGTTTGCTTCTCAAAC+AGG | + | tig0020520:35297-35316 | Msa1382540:intron | 45.0% |
TGCAGTCTTTCCCTTTATGG+TGG | + | tig0020520:35360-35379 | Msa1382540:intron | 45.0% | |
GTCTCCCAAACAAACCTTCA+AGG | + | tig0020520:35524-35543 | Msa1382540:CDS | 45.0% | |
TGTGATGTTGGAGTTTCACG+TGG | + | tig0020520:35556-35575 | Msa1382540:CDS | 45.0% | |
TTTCACGTGGATGACACAAC+TGG | + | tig0020520:35569-35588 | Msa1382540:CDS | 45.0% | |
TGACACAACTGGAGCAAATG+AGG | + | tig0020520:35580-35599 | Msa1382540:CDS | 45.0% | |
! | AGTTTGGAACAACTTGCAGC+TGG | + | tig0020520:35644-35663 | Msa1382540:intron | 45.0% |
TTCAAGCCCAAGTTTGGATG+AGG | - | tig0020520:35685-35704 | None:intergenic | 45.0% | |
!! | GGGTATTGGAACTTGGTACA+TGG | - | tig0020520:35815-35834 | None:intergenic | 45.0% |
GACACAATCGAACAGAAGCA+TGG | - | tig0020520:36107-36126 | None:intergenic | 45.0% | |
!!! | CTTGTCATTTTTGCGGCTTC+AGG | + | tig0020520:36197-36216 | Msa1382540:CDS | 45.0% |
CTTGATCCTCCTATTCGGAA+AGG | + | tig0020520:36450-36469 | Msa1382540:CDS | 45.0% | |
AAAGTCTGCCCTTTCCGAAT+AGG | - | tig0020520:36462-36481 | None:intergenic | 45.0% | |
! | CAAGTTGGAGCTGTCTTACA+AGG | + | tig0020520:36672-36691 | Msa1382540:CDS | 45.0% |
CATTTCCAAAGCAGCTCTTG+AGG | - | tig0020520:36752-36771 | None:intergenic | 45.0% | |
GGACAAACCACGCAATATTG+TGG | - | tig0020520:36907-36926 | None:intergenic | 45.0% | |
TCAAGCCCTTAGAACTGCAT+GGG | - | tig0020520:37416-37435 | None:intergenic | 45.0% | |
TTCAAGCCCTTAGAACTGCA+TGG | - | tig0020520:37417-37436 | None:intergenic | 45.0% | |
ATATGCGTATGTCTTGTGGG+AGG | + | tig0020520:37887-37906 | Msa1382540:intron | 45.0% | |
GGTTCTCCTACTGATGATTC+TGG | + | tig0020520:38016-38035 | Msa1382540:CDS | 45.0% | |
TCTGCACCAGAATCATCAGT+AGG | - | tig0020520:38025-38044 | None:intergenic | 45.0% | |
! | TTCTTTGGTTCCTTCTTGGC+AGG | - | tig0020520:38180-38199 | None:intergenic | 45.0% |
TGCCAAGAAGGAACCAAAGA+AGG | + | tig0020520:38179-38198 | Msa1382540:CDS | 45.0% | |
! | AAAGATGCTGATGACGAAGG+AGG | + | tig0020520:38240-38259 | Msa1382540:CDS | 45.0% |
AGGATCCAAATGCACCTAAG+AGG | + | tig0020520:38289-38308 | Msa1382540:CDS | 45.0% | |
GGATCCAAATGCACCTAAGA+GGG | + | tig0020520:38290-38309 | Msa1382540:CDS | 45.0% | |
AAAAATCTGTCGGGTATGGC+TGG | + | tig0020520:38504-38523 | Msa1382540:CDS | 45.0% | |
CGTTACAAGGATGAGATGAG+TGG | + | tig0020520:38688-38707 | Msa1382540:CDS | 45.0% | |
AAAACTGCAGCCAAGCAATC+GGG | - | tig0020520:38799-38818 | None:intergenic | 45.0% | |
GTTTGAGTGTTCTATGTCCC+CGG | + | tig0020520:38941-38960 | Msa1382540:three_prime_UTR | 45.0% | |
TTTGAGTGTTCTATGTCCCC+GGG | + | tig0020520:38942-38961 | Msa1382540:three_prime_UTR | 45.0% | |
!! | TAACGGGCTGCTTGTTTGAA+TGG | + | tig0020520:38969-38988 | Msa1382540:three_prime_UTR | 45.0% |
CTGCTTGTTTGAATGGCTTG+AGG | + | tig0020520:38976-38995 | Msa1382540:three_prime_UTR | 45.0% | |
! | ACATACTGGTTACCTGCTAG+TGG | + | tig0020520:39068-39087 | Msa1382540:three_prime_UTR | 45.0% |
CATGCAGCCATACCTTGATA+AGG | - | tig0020520:39175-39194 | None:intergenic | 45.0% | |
CACTTGATAAAGGGGCAACA+TGG | - | tig0020520:39258-39277 | None:intergenic | 45.0% | |
!! | AATTACAATAATAAAAATTA+GGG | - | tig0020520:33374-33393 | None:intergenic | 5.0% |
!! | TAATTACAATAATAAAAATT+AGG | - | tig0020520:33375-33394 | None:intergenic | 5.0% |
TGTCTCTGCACACTGAGAGA+GGG | - | tig0020520:33070-33089 | None:intergenic | 50.0% | |
TTGTCTCTGCACACTGAGAG+AGG | - | tig0020520:33071-33090 | None:intergenic | 50.0% | |
TCTCTTTCTCGCCACCATGA+CGG | + | tig0020520:33119-33138 | Msa1382540:exon | 50.0% | |
!! | TATTGGTGCTGCAGAATCCG+GGG | + | tig0020520:34332-34351 | Msa1382540:intron | 50.0% |
TTATGGAAGAGACAGGGAGG+TGG | + | tig0020520:34382-34401 | Msa1382540:CDS | 50.0% | |
AACGGGCGTAACATGGATGA+AGG | + | tig0020520:34435-34454 | Msa1382540:CDS | 50.0% | |
GACGGAGAACTACCTGATCA+CGG | - | tig0020520:34525-34544 | None:intergenic | 50.0% | |
CACCTTCGGAGTAACTGTTG+GGG | + | tig0020520:34769-34788 | Msa1382540:CDS | 50.0% | |
TCTGTTACTGGGCGCAATTG+GGG | + | tig0020520:34803-34822 | Msa1382540:CDS | 50.0% | |
AGCCCAAGTTTGGATGAGGA+AGG | - | tig0020520:35681-35700 | None:intergenic | 50.0% | |
ACAAACTCACCTGAGCAGGA+GGG | - | tig0020520:35860-35879 | None:intergenic | 50.0% | |
ACAGACAAACTCACCTGAGC+AGG | - | tig0020520:35864-35883 | None:intergenic | 50.0% | |
TCTATGGCTGATGTTGGTGC+TGG | + | tig0020520:35974-35993 | Msa1382540:CDS | 50.0% | |
! | ATTTTTGCGGCTTCAGGGAC+AGG | + | tig0020520:36203-36222 | Msa1382540:CDS | 50.0% |
CAAAATCCAGTACGGCAGTG+TGG | + | tig0020520:36236-36255 | Msa1382540:CDS | 50.0% | |
GTACCCTCATATCGTGATGC+AGG | + | tig0020520:36482-36501 | Msa1382540:CDS | 50.0% | |
CTCTTGAGGAGCAGTATCTC+AGG | - | tig0020520:36738-36757 | None:intergenic | 50.0% | |
! | ATATTGCGTGGTTTGTCCGG+AGG | + | tig0020520:36909-36928 | Msa1382540:CDS | 50.0% |
! | AGGCTTGGTAACTTTGCCTC+CGG | - | tig0020520:36928-36947 | None:intergenic | 50.0% |
GAATTTGAGCGACATGCTGC+TGG | + | tig0020520:37207-37226 | Msa1382540:CDS | 50.0% | |
! | TCCTGCCCATGCAGTTCTAA+GGG | + | tig0020520:37408-37427 | Msa1382540:intron | 50.0% |
TTTCTGATGCGCTCGAGATG+TGG | - | tig0020520:37519-37538 | None:intergenic | 50.0% | |
GAGCGCATCAGAAATGAAGC+TGG | + | tig0020520:37525-37544 | Msa1382540:CDS | 50.0% | |
CGCATCAGAAATGAAGCTGG+TGG | + | tig0020520:37528-37547 | Msa1382540:CDS | 50.0% | |
TGGTGGAGATGAAAGTGACG+AGG | + | tig0020520:37545-37564 | Msa1382540:CDS | 50.0% | |
TGGAGATGAAAGTGACGAGG+AGG | + | tig0020520:37548-37567 | Msa1382540:CDS | 50.0% | |
! | GTTCTCGACAAGGATGATGG+AGG | + | tig0020520:37995-38014 | Msa1382540:CDS | 50.0% |
GACTCTGATGCTAGCCAAAG+TGG | + | tig0020520:38046-38065 | Msa1382540:CDS | 50.0% | |
TCTGATGCTAGCCAAAGTGG+TGG | + | tig0020520:38049-38068 | Msa1382540:CDS | 50.0% | |
! | CTTGGCAGGTTTCTGGAAGT+TGG | - | tig0020520:38166-38185 | None:intergenic | 50.0% |
CTTCCAGAAACCTGCCAAGA+AGG | + | tig0020520:38167-38186 | Msa1382540:intron | 50.0% | |
GTTCCTTCTTGGCAGGTTTC+TGG | - | tig0020520:38173-38192 | None:intergenic | 50.0% | |
AGTGCCCTCTTAGGTGCATT+TGG | - | tig0020520:38297-38316 | None:intergenic | 50.0% | |
AAACCAGACAGTGCCCTCTT+AGG | - | tig0020520:38306-38325 | None:intergenic | 50.0% | |
GCATGTTCAATACACAGCGG+AGG | + | tig0020520:38624-38643 | Msa1382540:intron | 50.0% | |
TCAATACACAGCGGAGGAGA+AGG | + | tig0020520:38630-38649 | Msa1382540:intron | 50.0% | |
GGAGGAGAAGGAACCTTATG+AGG | + | tig0020520:38642-38661 | Msa1382540:CDS | 50.0% | |
! | TCTTGGGCTTTGGCCTCATA+AGG | - | tig0020520:38658-38677 | None:intergenic | 50.0% |
TTGAGTGTTCTATGTCCCCG+GGG | + | tig0020520:38943-38962 | Msa1382540:three_prime_UTR | 50.0% | |
CTATGTCCCCGGGGTTATAA+CGG | + | tig0020520:38952-38971 | Msa1382540:three_prime_UTR | 50.0% | |
TATGTCCCCGGGGTTATAAC+GGG | + | tig0020520:38953-38972 | Msa1382540:three_prime_UTR | 50.0% | |
TTGAATGGCTTGAGGAAGGC+TGG | + | tig0020520:38984-39003 | Msa1382540:three_prime_UTR | 50.0% | |
GATGAGCAGGGTCTAGAAAG+AGG | - | tig0020520:39219-39238 | None:intergenic | 50.0% | |
CTTTCTAGACCCTGCTCATC+CGG | + | tig0020520:39219-39238 | Msa1382540:three_prime_UTR | 50.0% | |
TTTCTAGACCCTGCTCATCC+GGG | + | tig0020520:39220-39239 | Msa1382540:three_prime_UTR | 50.0% | |
ACATGGTGCACTAAAGCTCC+CGG | - | tig0020520:39241-39260 | None:intergenic | 50.0% | |
! | TTTCTCGCCACCATGACGGA+CGG | + | tig0020520:33123-33142 | Msa1382540:exon | 55.0% |
GAAGAGATGACCGTCCGTCA+TGG | - | tig0020520:33136-33155 | None:intergenic | 55.0% | |
!! | CGGACATAACGGGCGTAACA+TGG | + | tig0020520:34428-34447 | Msa1382540:CDS | 55.0% |
CTCCCCAACAGTTACTCCGA+AGG | - | tig0020520:34774-34793 | None:intergenic | 55.0% | |
GACAAACTCACCTGAGCAGG+AGG | - | tig0020520:35861-35880 | None:intergenic | 55.0% | |
!! | ATGGCTGATGTTGGTGCTGG+AGG | + | tig0020520:35977-35996 | Msa1382540:CDS | 55.0% |
GTCTGCCCTTTCCGAATAGG+AGG | - | tig0020520:36459-36478 | None:intergenic | 55.0% | |
CTGCTCCTCAAGAGCTGCTT+TGG | + | tig0020520:36744-36763 | Msa1382540:intron | 55.0% | |
GGAGGCAAAGTTACCAAGCC+TGG | + | tig0020520:36927-36946 | Msa1382540:CDS | 55.0% | |
TTTGAGCGACATGCTGCTGG+TGG | + | tig0020520:37210-37229 | Msa1382540:CDS | 55.0% | |
GTCCTGCCCATGCAGTTCTA+AGG | + | tig0020520:37407-37426 | Msa1382540:intron | 55.0% | |
GCTGATGCCCAACCAACTGT+TGG | + | tig0020520:37450-37469 | Msa1382540:CDS | 55.0% | |
TGCCCAACCAACTGTTGGTG+TGG | + | tig0020520:37455-37474 | Msa1382540:CDS | 55.0% | |
GGCCACACCAACAGTTGGTT+GGG | - | tig0020520:37460-37479 | None:intergenic | 55.0% | |
TGGCCACACCAACAGTTGGT+TGG | - | tig0020520:37461-37480 | None:intergenic | 55.0% | |
ACCAACTGTTGGTGTGGCCA+AGG | + | tig0020520:37461-37480 | Msa1382540:CDS | 55.0% | |
ACCTTGGCCACACCAACAGT+TGG | - | tig0020520:37465-37484 | None:intergenic | 55.0% | |
CCTCTGTCTCACCACCACTT+TGG | - | tig0020520:38063-38082 | None:intergenic | 55.0% | |
! | CCAAAGTGGTGGTGAGACAG+AGG | + | tig0020520:38060-38079 | Msa1382540:CDS | 55.0% |
!! | ACGGACGTGGGAAGAGTACT+TGG | + | tig0020520:38471-38490 | Msa1382540:CDS | 55.0% |
AAGCAGCCCGTTATAACCCC+GGG | - | tig0020520:38962-38981 | None:intergenic | 55.0% | |
CAAGCAGCCCGTTATAACCC+CGG | - | tig0020520:38963-38982 | None:intergenic | 55.0% | |
AGGAAGGCTGGAGAAGGATG+AGG | + | tig0020520:38996-39015 | Msa1382540:three_prime_UTR | 55.0% | |
CTAAAGCTCCCGGATGAGCA+GGG | - | tig0020520:39231-39250 | None:intergenic | 55.0% | |
ACTAAAGCTCCCGGATGAGC+AGG | - | tig0020520:39232-39251 | None:intergenic | 55.0% | |
GAGATGACCGTCCGTCATGG+TGG | - | tig0020520:33133-33152 | None:intergenic | 60.0% | |
TGAAGATCGCCCTCCTGCTC+AGG | + | tig0020520:35848-35867 | Msa1382540:CDS | 60.0% | |
GCCCTTAGAACTGCATGGGC+AGG | - | tig0020520:37412-37431 | None:intergenic | 60.0% | |
GCGCTCGAGATGTGGATCGA+CGG | - | tig0020520:37511-37530 | None:intergenic | 60.0% | |
GTCTTGTGGGAGGCTGCATG+TGG | + | tig0020520:37897-37916 | Msa1382540:intron | 60.0% | |
!! | GCACCTAAGAGGGCACTGTC+TGG | + | tig0020520:38300-38319 | Msa1382540:CDS | 60.0% |
AGCAGCCCGTTATAACCCCG+GGG | - | tig0020520:38961-38980 | None:intergenic | 60.0% | |
GGCTTGAGGAAGGCTGGAGA+AGG | + | tig0020520:38990-39009 | Msa1382540:three_prime_UTR | 60.0% | |
AACATTACCCTCGGCGGCCG+TGG | + | tig0020520:33159-33178 | Msa1382540:CDS | 65.0% | |
!! | GAGAGCTTACGGTGCCGCCA+CGG | - | tig0020520:33179-33198 | None:intergenic | 65.0% |
GGCGAACCACACTGCCGTAC+TGG | - | tig0020520:36245-36264 | None:intergenic | 65.0% | |
TGTGGGAGGCTGCATGTGGC+AGG | + | tig0020520:37901-37920 | Msa1382540:intron | 65.0% | |
ATTACCCTCGGCGGCCGTGG+CGG | + | tig0020520:33162-33181 | Msa1382540:CDS | 70.0% | |
!! | GGTGCCGCCACGGCCGCCGA+GGG | - | tig0020520:33169-33188 | None:intergenic | 85.0% |
!!! | CGGTGCCGCCACGGCCGCCG+AGG | - | tig0020520:33170-33189 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0020520 | gene | 33065 | 39310 | 33065 | ID=Msa1382540;Name=Msa1382540 |
tig0020520 | mRNA | 33065 | 39310 | 33065 | ID=Msa1382540-mRNA-1;Parent=Msa1382540;Name=Msa1382540-mRNA-1;_AED=0.11;_eAED=0.11;_QI=70|0.93|0.93|1|1|1|16|539|646 |
tig0020520 | exon | 33065 | 33188 | 33065 | ID=Msa1382540-mRNA-1:exon:8180;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 34346 | 34531 | 34346 | ID=Msa1382540-mRNA-1:exon:8181;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 34737 | 34842 | 34737 | ID=Msa1382540-mRNA-1:exon:8182;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 35465 | 35601 | 35465 | ID=Msa1382540-mRNA-1:exon:8183;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 35786 | 35869 | 35786 | ID=Msa1382540-mRNA-1:exon:8184;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 35953 | 36047 | 35953 | ID=Msa1382540-mRNA-1:exon:8185;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 36173 | 36281 | 36173 | ID=Msa1382540-mRNA-1:exon:8186;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 36417 | 36503 | 36417 | ID=Msa1382540-mRNA-1:exon:8187;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 36601 | 36693 | 36601 | ID=Msa1382540-mRNA-1:exon:8188;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 36882 | 37079 | 36882 | ID=Msa1382540-mRNA-1:exon:8189;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 37195 | 37340 | 37195 | ID=Msa1382540-mRNA-1:exon:8190;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 37422 | 37569 | 37422 | ID=Msa1382540-mRNA-1:exon:8191;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 37983 | 38081 | 37983 | ID=Msa1382540-mRNA-1:exon:8192;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 38174 | 38353 | 38174 | ID=Msa1382540-mRNA-1:exon:8193;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 38438 | 38525 | 38438 | ID=Msa1382540-mRNA-1:exon:8194;Parent=Msa1382540-mRNA-1 |
tig0020520 | exon | 38641 | 39310 | 38641 | ID=Msa1382540-mRNA-1:exon:8195;Parent=Msa1382540-mRNA-1 |
tig0020520 | five_prime_UTR | 33065 | 33134 | 33065 | ID=Msa1382540-mRNA-1:five_prime_utr;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 33135 | 33188 | 33135 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 34346 | 34531 | 34346 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 34737 | 34842 | 34737 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 35465 | 35601 | 35465 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 35786 | 35869 | 35786 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 35953 | 36047 | 35953 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 36173 | 36281 | 36173 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 36417 | 36503 | 36417 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 36601 | 36693 | 36601 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 36882 | 37079 | 36882 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 37195 | 37340 | 37195 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 37422 | 37569 | 37422 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 37983 | 38081 | 37983 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 38174 | 38353 | 38174 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 38438 | 38525 | 38438 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | CDS | 38641 | 38771 | 38641 | ID=Msa1382540-mRNA-1:cds;Parent=Msa1382540-mRNA-1 |
tig0020520 | three_prime_UTR | 38772 | 39310 | 38772 | ID=Msa1382540-mRNA-1:three_prime_utr;Parent=Msa1382540-mRNA-1 |
Gene Sequence |
Protein sequence |