Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199990 | RHN78823.1 | 69.737 | 76 | 23 | 0 | 72 | 147 | 141 | 216 | 2.27e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1199990 | 0.836127 | 1.122373e-56 | -8.615850e-47 |
| Msa0003700 | Msa1199990 | 0.854179 | 1.462414e-61 | -8.615850e-47 |
| Msa0008090 | Msa1199990 | 0.829936 | 3.894404e-55 | -8.615850e-47 |
| Msa0020930 | Msa1199990 | 0.813509 | 2.469401e-51 | -8.615850e-47 |
| Msa0024210 | Msa1199990 | -0.825864 | 3.714863e-54 | -8.615850e-47 |
| Msa0029630 | Msa1199990 | 0.807718 | 4.407024e-50 | -8.615850e-47 |
| Msa0031340 | Msa1199990 | 0.821174 | 4.645190e-53 | -8.615850e-47 |
| Msa0043980 | Msa1199990 | 0.801533 | 8.607852e-49 | -8.615850e-47 |
| Msa0061340 | Msa1199990 | 0.800926 | 1.145951e-48 | -8.615850e-47 |
| Msa0064350 | Msa1199990 | 0.822447 | 2.357076e-53 | -8.615850e-47 |
| Msa0068680 | Msa1199990 | 0.801815 | 7.534677e-49 | -8.615850e-47 |
| Msa0073670 | Msa1199990 | 0.811940 | 5.443648e-51 | -8.615850e-47 |
| Msa0078650 | Msa1199990 | 0.803223 | 3.862784e-49 | -8.615850e-47 |
| Msa0079070 | Msa1199990 | 0.805086 | 1.582126e-49 | -8.615850e-47 |
| Msa0083280 | Msa1199990 | 0.806551 | 7.788155e-50 | -8.615850e-47 |
| Msa0084080 | Msa1199990 | 0.824275 | 8.814137e-54 | -8.615850e-47 |
| Msa0090360 | Msa1199990 | 0.842998 | 1.835772e-58 | -8.615850e-47 |
| Msa0094120 | Msa1199990 | 0.811021 | 8.622737e-51 | -8.615850e-47 |
| Msa0097840 | Msa1199990 | 0.803945 | 2.736116e-49 | -8.615850e-47 |
| Msa0109690 | Msa1199990 | 0.801950 | 7.070890e-49 | -8.615850e-47 |
| Msa0110970 | Msa1199990 | 0.804081 | 2.563355e-49 | -8.615850e-47 |
| Msa0114060 | Msa1199990 | 0.804231 | 2.386216e-49 | -8.615850e-47 |
| Msa0120040 | Msa1199990 | -0.822878 | 1.871416e-53 | -8.615850e-47 |
| Msa0602870 | Msa1199990 | 0.813959 | 1.965366e-51 | -8.615850e-47 |
| Msa0609410 | Msa1199990 | -0.816243 | 6.113616e-52 | -8.615850e-47 |
| Msa0612960 | Msa1199990 | 0.800561 | 1.360432e-48 | -8.615850e-47 |
| Msa0615490 | Msa1199990 | 0.812879 | 3.395201e-51 | -8.615850e-47 |
| Msa0615710 | Msa1199990 | 0.829957 | 3.849181e-55 | -8.615850e-47 |
| Msa0616160 | Msa1199990 | 0.819029 | 1.438960e-52 | -8.615850e-47 |
| Msa0623790 | Msa1199990 | 0.802416 | 5.668976e-49 | -8.615850e-47 |
| Msa0641190 | Msa1199990 | 0.820108 | 8.163549e-53 | -8.615850e-47 |
| Msa0643560 | Msa1199990 | 0.806092 | 9.727966e-50 | -8.615850e-47 |
| Msa0643890 | Msa1199990 | 0.822395 | 2.423997e-53 | -8.615850e-47 |
| Msa0657580 | Msa1199990 | 0.825193 | 5.356065e-54 | -8.615850e-47 |
| Msa0661300 | Msa1199990 | 0.801034 | 1.089452e-48 | -8.615850e-47 |
| Msa0663240 | Msa1199990 | 0.800725 | 1.259612e-48 | -8.615850e-47 |
| Msa0663390 | Msa1199990 | 0.803744 | 3.011559e-49 | -8.615850e-47 |
| Msa0682680 | Msa1199990 | 0.806512 | 7.935073e-50 | -8.615850e-47 |
| Msa0688480 | Msa1199990 | 0.805748 | 1.148959e-49 | -8.615850e-47 |
| Msa0689500 | Msa1199990 | 0.830505 | 2.828401e-55 | -8.615850e-47 |
| Msa0692840 | Msa1199990 | 0.810395 | 1.177281e-50 | -8.615850e-47 |
| Msa0692980 | Msa1199990 | 0.832831 | 7.551632e-56 | -8.615850e-47 |
| Msa0697940 | Msa1199990 | 0.809054 | 2.287641e-50 | -8.615850e-47 |
| Msa0698540 | Msa1199990 | 0.839699 | 1.355197e-57 | -8.615850e-47 |
| Msa0709400 | Msa1199990 | 0.808719 | 2.697883e-50 | -8.615850e-47 |
| Msa0713790 | Msa1199990 | 0.814137 | 1.795600e-51 | -8.615850e-47 |
| Msa0713820 | Msa1199990 | 0.800618 | 1.324662e-48 | -8.615850e-47 |
| Msa0716690 | Msa1199990 | 0.811447 | 6.970367e-51 | -8.615850e-47 |
| Msa0729720 | Msa1199990 | 0.817711 | 2.862612e-52 | -8.615850e-47 |
| Msa0740510 | Msa1199990 | 0.815677 | 8.178632e-52 | -8.615850e-47 |
| Msa0752700 | Msa1199990 | 0.802767 | 4.797537e-49 | -8.615850e-47 |
| Msa0763070 | Msa1199990 | 0.804371 | 2.230660e-49 | -8.615850e-47 |
| Msa0765910 | Msa1199990 | 0.808551 | 2.929094e-50 | -8.615850e-47 |
| Msa0772410 | Msa1199990 | 0.820161 | 7.936870e-53 | -8.615850e-47 |
| Msa0794970 | Msa1199990 | 0.817151 | 3.826900e-52 | -8.615850e-47 |
| Msa0806790 | Msa1199990 | 0.835713 | 1.429572e-56 | -8.615850e-47 |
| Msa0806800 | Msa1199990 | 0.853869 | 1.796123e-61 | -8.615850e-47 |
| Msa0808270 | Msa1199990 | 0.803942 | 2.739642e-49 | -8.615850e-47 |
| Msa0812140 | Msa1199990 | 0.804902 | 1.728771e-49 | -8.615850e-47 |
| Msa0820770 | Msa1199990 | 0.817255 | 3.624877e-52 | -8.615850e-47 |
| Msa0832340 | Msa1199990 | 0.821961 | 3.055574e-53 | -8.615850e-47 |
| Msa0835280 | Msa1199990 | 0.806000 | 1.017228e-49 | -8.615850e-47 |
| Msa0837660 | Msa1199990 | 0.820698 | 5.978311e-53 | -8.615850e-47 |
| Msa0841340 | Msa1199990 | 0.801419 | 9.086859e-49 | -8.615850e-47 |
| Msa0123560 | Msa1199990 | 0.829426 | 5.183012e-55 | -8.615850e-47 |
| Msa0125450 | Msa1199990 | 0.820364 | 7.131160e-53 | -8.615850e-47 |
| Msa0125540 | Msa1199990 | 0.823096 | 1.665144e-53 | -8.615850e-47 |
| Msa0126920 | Msa1199990 | -0.802470 | 5.526040e-49 | -8.615850e-47 |
| Msa0137840 | Msa1199990 | 0.841131 | 5.721681e-58 | -8.615850e-47 |
| Msa0140110 | Msa1199990 | 0.819561 | 1.088787e-52 | -8.615850e-47 |
| Msa0140650 | Msa1199990 | 0.816461 | 5.465894e-52 | -8.615850e-47 |
| Msa0140820 | Msa1199990 | 0.806597 | 7.616068e-50 | -8.615850e-47 |
| Msa0142950 | Msa1199990 | 0.812077 | 5.083464e-51 | -8.615850e-47 |
| Msa0145580 | Msa1199990 | 0.803106 | 4.084171e-49 | -8.615850e-47 |
| Msa0146260 | Msa1199990 | 0.827459 | 1.546016e-54 | -8.615850e-47 |
| Msa0149390 | Msa1199990 | 0.803459 | 3.450794e-49 | -8.615850e-47 |
| Msa0157290 | Msa1199990 | 0.800200 | 1.611412e-48 | -8.615850e-47 |
| Msa0159180 | Msa1199990 | 0.805840 | 1.098989e-49 | -8.615850e-47 |
| Msa0159930 | Msa1199990 | 0.822778 | 1.974519e-53 | -8.615850e-47 |
| Msa0171290 | Msa1199990 | 0.847008 | 1.517167e-59 | -8.615850e-47 |
| Msa0183050 | Msa1199990 | 0.802212 | 6.244969e-49 | -8.615850e-47 |
| Msa0184040 | Msa1199990 | 0.841607 | 4.287497e-58 | -8.615850e-47 |
| Msa0184780 | Msa1199990 | 0.810107 | 1.358419e-50 | -8.615850e-47 |
| Msa0191050 | Msa1199990 | 0.801720 | 7.881530e-49 | -8.615850e-47 |
| Msa0194480 | Msa1199990 | 0.807260 | 5.513407e-50 | -8.615850e-47 |
| Msa0194950 | Msa1199990 | -0.808324 | 3.275616e-50 | -8.615850e-47 |
| Msa0195630 | Msa1199990 | 0.853591 | 2.159031e-61 | -8.615850e-47 |
| Msa0195980 | Msa1199990 | 0.829707 | 4.427671e-55 | -8.615850e-47 |
| Msa0199880 | Msa1199990 | 0.825016 | 5.896980e-54 | -8.615850e-47 |
| Msa0207670 | Msa1199990 | 0.801583 | 8.407774e-49 | -8.615850e-47 |
| Msa0209350 | Msa1199990 | 0.827883 | 1.223436e-54 | -8.615850e-47 |
| Msa0211150 | Msa1199990 | 0.819947 | 8.886795e-53 | -8.615850e-47 |
| Msa0216240 | Msa1199990 | 0.804017 | 2.643760e-49 | -8.615850e-47 |
| Msa0225740 | Msa1199990 | 0.811105 | 8.266708e-51 | -8.615850e-47 |
| Msa0226540 | Msa1199990 | 0.843647 | 1.232188e-58 | -8.615850e-47 |
| Msa0231980 | Msa1199990 | 0.813924 | 2.000237e-51 | -8.615850e-47 |
| Msa0232050 | Msa1199990 | 0.811368 | 7.249776e-51 | -8.615850e-47 |
| Msa0237410 | Msa1199990 | 0.851123 | 1.089370e-60 | -8.615850e-47 |
| Msa0369450 | Msa1199990 | 0.814316 | 1.639516e-51 | -8.615850e-47 |
| Msa0369850 | Msa1199990 | 0.801703 | 7.945191e-49 | -8.615850e-47 |
| Msa0376300 | Msa1199990 | 0.836907 | 7.104213e-57 | -8.615850e-47 |
| Msa0376310 | Msa1199990 | 0.838195 | 3.321495e-57 | -8.615850e-47 |
| Msa0376350 | Msa1199990 | 0.828006 | 1.142462e-54 | -8.615850e-47 |
| Msa0380300 | Msa1199990 | 0.824876 | 6.365212e-54 | -8.615850e-47 |
| Msa0391690 | Msa1199990 | 0.814799 | 1.281609e-51 | -8.615850e-47 |
| Msa0393080 | Msa1199990 | 0.801251 | 9.833233e-49 | -8.615850e-47 |
| Msa0410500 | Msa1199990 | 0.804596 | 2.002688e-49 | -8.615850e-47 |
| Msa0410650 | Msa1199990 | 0.813185 | 2.908457e-51 | -8.615850e-47 |
| Msa0415430 | Msa1199990 | 0.817762 | 2.787457e-52 | -8.615850e-47 |
| Msa0424790 | Msa1199990 | 0.815228 | 1.029426e-51 | -8.615850e-47 |
| Msa0433360 | Msa1199990 | 0.804709 | 1.896372e-49 | -8.615850e-47 |
| Msa0440750 | Msa1199990 | 0.814212 | 1.728315e-51 | -8.615850e-47 |
| Msa0441130 | Msa1199990 | 0.803684 | 3.099971e-49 | -8.615850e-47 |
| Msa0455040 | Msa1199990 | 0.805028 | 1.626556e-49 | -8.615850e-47 |
| Msa0471440 | Msa1199990 | 0.801024 | 1.094157e-48 | -8.615850e-47 |
| Msa0474950 | Msa1199990 | 0.823658 | 1.230258e-53 | -8.615850e-47 |
| Msa0475790 | Msa1199990 | 0.807066 | 6.059976e-50 | -8.615850e-47 |
| Msa0479170 | Msa1199990 | 0.802540 | 5.345460e-49 | -8.615850e-47 |
| Msa0479970 | Msa1199990 | 0.806624 | 7.516145e-50 | -8.615850e-47 |
| Msa0481530 | Msa1199990 | 0.800208 | 1.605445e-48 | -8.615850e-47 |
| Msa0482340 | Msa1199990 | 0.800783 | 1.225767e-48 | -8.615850e-47 |
| Msa0980880 | Msa1199990 | 0.806661 | 7.380902e-50 | -8.615850e-47 |
| Msa0997970 | Msa1199990 | 0.839380 | 1.640446e-57 | -8.615850e-47 |
| Msa1010350 | Msa1199990 | 0.804779 | 1.833686e-49 | -8.615850e-47 |
| Msa1020670 | Msa1199990 | 0.800237 | 1.583385e-48 | -8.615850e-47 |
| Msa1034150 | Msa1199990 | 0.822044 | 2.924304e-53 | -8.615850e-47 |
| Msa1041670 | Msa1199990 | 0.807209 | 5.652517e-50 | -8.615850e-47 |
| Msa1041850 | Msa1199990 | 0.802455 | 5.564205e-49 | -8.615850e-47 |
| Msa1046020 | Msa1199990 | 0.815970 | 7.035532e-52 | -8.615850e-47 |
| Msa1046060 | Msa1199990 | 0.807364 | 5.240413e-50 | -8.615850e-47 |
| Msa1063950 | Msa1199990 | 0.801455 | 8.934081e-49 | -8.615850e-47 |
| Msa1078170 | Msa1199990 | 0.824201 | 9.175878e-54 | -8.615850e-47 |
| Msa1085200 | Msa1199990 | 0.817735 | 2.826081e-52 | -8.615850e-47 |
| Msa1093840 | Msa1199990 | 0.811176 | 7.982017e-51 | -8.615850e-47 |
| Msa1102220 | Msa1199990 | 0.800632 | 1.316060e-48 | -8.615850e-47 |
| Msa1102770 | Msa1199990 | 0.801967 | 7.012899e-49 | -8.615850e-47 |
| Msa0242410 | Msa1199990 | 0.817160 | 3.809378e-52 | -8.615850e-47 |
| Msa0255090 | Msa1199990 | 0.811082 | 8.363751e-51 | -8.615850e-47 |
| Msa0257490 | Msa1199990 | 0.805457 | 1.322648e-49 | -8.615850e-47 |
| Msa0259380 | Msa1199990 | 0.807465 | 4.988665e-50 | -8.615850e-47 |
| Msa0281530 | Msa1199990 | 0.806264 | 8.949482e-50 | -8.615850e-47 |
| Msa0287410 | Msa1199990 | 0.812088 | 5.054057e-51 | -8.615850e-47 |
| Msa0287650 | Msa1199990 | 0.837274 | 5.727237e-57 | -8.615850e-47 |
| Msa0296790 | Msa1199990 | 0.801686 | 8.009361e-49 | -8.615850e-47 |
| Msa0300120 | Msa1199990 | 0.802257 | 6.112030e-49 | -8.615850e-47 |
| Msa0304510 | Msa1199990 | 0.802177 | 6.348431e-49 | -8.615850e-47 |
| Msa0309770 | Msa1199990 | 0.805660 | 1.199064e-49 | -8.615850e-47 |
| Msa0311700 | Msa1199990 | 0.821217 | 4.540655e-53 | -8.615850e-47 |
| Msa0314720 | Msa1199990 | 0.824599 | 7.397228e-54 | -8.615850e-47 |
| Msa0315440 | Msa1199990 | -0.806831 | 6.794693e-50 | -8.615850e-47 |
| Msa0334360 | Msa1199990 | 0.822073 | 2.879089e-53 | -8.615850e-47 |
| Msa0345970 | Msa1199990 | 0.812253 | 4.653626e-51 | -8.615850e-47 |
| Msa0346430 | Msa1199990 | 0.813916 | 2.008619e-51 | -8.615850e-47 |
| Msa1107900 | Msa1199990 | 0.802825 | 4.668414e-49 | -8.615850e-47 |
| Msa1110190 | Msa1199990 | 0.800212 | 1.602637e-48 | -8.615850e-47 |
| Msa1111130 | Msa1199990 | 0.804908 | 1.723451e-49 | -8.615850e-47 |
| Msa1121440 | Msa1199990 | 0.818940 | 1.507581e-52 | -8.615850e-47 |
| Msa1124960 | Msa1199990 | 0.800887 | 1.167219e-48 | -8.615850e-47 |
| Msa1127890 | Msa1199990 | 0.814672 | 1.367739e-51 | -8.615850e-47 |
| Msa1128600 | Msa1199990 | 0.823400 | 1.413608e-53 | -8.615850e-47 |
| Msa1130980 | Msa1199990 | 0.847043 | 1.484089e-59 | -8.615850e-47 |
| Msa1147280 | Msa1199990 | 0.837527 | 4.931500e-57 | -8.615850e-47 |
| Msa1147970 | Msa1199990 | 0.808416 | 3.130582e-50 | -8.615850e-47 |
| Msa1151910 | Msa1199990 | 0.814026 | 1.899769e-51 | -8.615850e-47 |
| Msa1154710 | Msa1199990 | 0.802124 | 6.509834e-49 | -8.615850e-47 |
| Msa1159840 | Msa1199990 | 0.804927 | 1.707948e-49 | -8.615850e-47 |
| Msa1165870 | Msa1199990 | 0.816052 | 6.747047e-52 | -8.615850e-47 |
| Msa1165940 | Msa1199990 | 0.820038 | 8.469372e-53 | -8.615850e-47 |
| Msa1166560 | Msa1199990 | 0.804934 | 1.702255e-49 | -8.615850e-47 |
| Msa1167340 | Msa1199990 | 0.809287 | 2.038232e-50 | -8.615850e-47 |
| Msa1169550 | Msa1199990 | 0.818971 | 1.483802e-52 | -8.615850e-47 |
| Msa1189070 | Msa1199990 | 0.809179 | 2.149848e-50 | -8.615850e-47 |
| Msa1197060 | Msa1199990 | 0.800586 | 1.344816e-48 | -8.615850e-47 |
| Msa1199570 | Msa1199990 | 0.817552 | 3.108611e-52 | -8.615850e-47 |
| Msa1199990 | Msa1204530 | 0.805805 | 1.118187e-49 | -8.615850e-47 |
| Msa1199990 | Msa1209460 | 0.800358 | 1.496117e-48 | -8.615850e-47 |
| Msa1199990 | Msa1212950 | 0.801237 | 9.899202e-49 | -8.615850e-47 |
| Msa1199990 | Msa1214020 | 0.810870 | 9.294788e-51 | -8.615850e-47 |
| Msa1199990 | Msa1239910 | 0.803051 | 4.192923e-49 | -8.615850e-47 |
| Msa1199990 | Msa1243740 | -0.808100 | 3.655906e-50 | -8.615850e-47 |
| Msa1199990 | Msa1244600 | 0.841850 | 3.700124e-58 | -8.615850e-47 |
| Msa1199990 | Msa1250530 | 0.845083 | 5.064687e-59 | -8.615850e-47 |
| Msa1199990 | Msa1253020 | 0.835707 | 1.434596e-56 | -8.615850e-47 |
| Msa1199990 | Msa1254730 | 0.804640 | 1.960719e-49 | -8.615850e-47 |
| Msa1199990 | Msa1256470 | 0.821063 | 4.926924e-53 | -8.615850e-47 |
| Msa1199990 | Msa1279400 | 0.867713 | 1.116800e-65 | -8.615850e-47 |
| Msa1199990 | Msa1284550 | 0.809781 | 1.596847e-50 | -8.615850e-47 |
| Msa1199990 | Msa1294820 | 0.810592 | 1.067674e-50 | -8.615850e-47 |
| Msa1199990 | Msa1306840 | 0.819772 | 9.744634e-53 | -8.615850e-47 |
| Msa1199990 | Msa1307950 | 0.809200 | 2.127698e-50 | -8.615850e-47 |
| Msa1199990 | Msa1327680 | 0.816847 | 4.477447e-52 | -8.615850e-47 |
| Msa1199990 | Msa1328710 | 0.835132 | 2.005216e-56 | -8.615850e-47 |
| Msa1199990 | Msa1335250 | 0.819794 | 9.630798e-53 | -8.615850e-47 |
| Msa1199990 | Msa1346730 | 0.829308 | 5.535482e-55 | -8.615850e-47 |
| Msa1199990 | Msa1353980 | 0.834029 | 3.794940e-56 | -8.615850e-47 |
| Msa1199990 | Msa1360440 | 0.800123 | 1.670755e-48 | -8.615850e-47 |
| Msa1199990 | Msa1361520 | 0.817583 | 3.057990e-52 | -8.615850e-47 |
| Msa1199990 | Msa1367590 | 0.817285 | 3.569738e-52 | -8.615850e-47 |
| Msa1199990 | Msa1368120 | 0.824776 | 6.719119e-54 | -8.615850e-47 |
| Msa1199990 | Msa1368530 | 0.801158 | 1.027189e-48 | -8.615850e-47 |
| Msa1199990 | Msa1373330 | 0.818116 | 2.318160e-52 | -8.615850e-47 |
| Msa1199990 | Msa1374040 | 0.832675 | 8.254967e-56 | -8.615850e-47 |
| Msa1199990 | Msa1375560 | 0.800742 | 1.249428e-48 | -8.615850e-47 |
| Msa1199990 | Msa1376650 | 0.810833 | 9.468740e-51 | -8.615850e-47 |
| Msa1199990 | Msa1382540 | 0.847057 | 1.470820e-59 | -8.615850e-47 |
| Msa1199990 | Msa1385770 | 0.814765 | 1.304073e-51 | -8.615850e-47 |
| Msa1199990 | Msa1386780 | 0.804085 | 2.558731e-49 | -8.615850e-47 |
| Msa1199990 | Msa1387010 | 0.802498 | 5.453749e-49 | -8.615850e-47 |
| Msa1199990 | Msa1390800 | 0.819866 | 9.274345e-53 | -8.615850e-47 |
| Msa1199990 | Msa1394290 | 0.802079 | 6.649164e-49 | -8.615850e-47 |
| Msa1199990 | Msa1394500 | 0.828955 | 6.743257e-55 | -8.615850e-47 |
| Msa1199990 | Msa1402400 | 0.810037 | 1.406851e-50 | -8.615850e-47 |
| Msa1199990 | Msa1404010 | 0.801483 | 8.815373e-49 | -8.615850e-47 |
| Msa1199990 | Msa1409240 | 0.815551 | 8.722501e-52 | -8.615850e-47 |
| Msa1199990 | Msa1411020 | 0.808988 | 2.362812e-50 | -8.615850e-47 |
| Msa1199990 | Msa1418340 | 0.845149 | 4.862177e-59 | -8.615850e-47 |
| Msa1199990 | Msa1422580 | 0.854562 | 1.133045e-61 | -8.615850e-47 |
| Msa1199990 | Msa1424290 | 0.802980 | 4.336293e-49 | -8.615850e-47 |
| Msa1199990 | Msa1432420 | 0.800029 | 1.745928e-48 | -8.615850e-47 |
| Msa1199990 | Msa1433390 | 0.847409 | 1.178157e-59 | -8.615850e-47 |
| Msa1199990 | Msa1434140 | 0.812659 | 3.792366e-51 | -8.615850e-47 |
| Msa1199990 | Msa1434350 | 0.804805 | 1.810951e-49 | -8.615850e-47 |
| Msa1199990 | Msa1435270 | 0.816227 | 6.163435e-52 | -8.615850e-47 |
| Msa1199990 | Msa1439320 | 0.809803 | 1.579318e-50 | -8.615850e-47 |
| Msa1199990 | Msa1443850 | 0.819433 | 1.164508e-52 | -8.615850e-47 |
| Msa1199990 | Msa1451160 | 0.831425 | 1.681466e-55 | -8.615850e-47 |
| Msa1199990 | Msa1451560 | 0.816595 | 5.099233e-52 | -8.615850e-47 |
| Msa1199990 | Msa1452240 | 0.818242 | 2.171165e-52 | -8.615850e-47 |
| Msa1199990 | Msa1458610 | 0.800645 | 1.308057e-48 | -8.615850e-47 |
| Msa0485850 | Msa1199990 | 0.817743 | 2.814992e-52 | -8.615850e-47 |
| Msa0502880 | Msa1199990 | 0.820743 | 5.837873e-53 | -8.615850e-47 |
| Msa0507680 | Msa1199990 | 0.827972 | 1.164634e-54 | -8.615850e-47 |
| Msa0516170 | Msa1199990 | 0.813009 | 3.178756e-51 | -8.615850e-47 |
| Msa0524500 | Msa1199990 | 0.846248 | 2.446745e-59 | -8.615850e-47 |
| Msa0541360 | Msa1199990 | 0.806112 | 9.634068e-50 | -8.615850e-47 |
| Msa0542290 | Msa1199990 | 0.802079 | 6.651417e-49 | -8.615850e-47 |
| Msa0547160 | Msa1199990 | 0.818319 | 2.085409e-52 | -8.615850e-47 |
| Msa0548240 | Msa1199990 | 0.812304 | 4.534233e-51 | -8.615850e-47 |
| Msa0552810 | Msa1199990 | 0.821069 | 4.912264e-53 | -8.615850e-47 |
| Msa0556060 | Msa1199990 | 0.838871 | 2.223296e-57 | -8.615850e-47 |
| Msa0565730 | Msa1199990 | 0.803535 | 3.328770e-49 | -8.615850e-47 |
| Msa0577500 | Msa1199990 | 0.816474 | 5.427783e-52 | -8.615850e-47 |
| Msa0578860 | Msa1199990 | 0.828151 | 1.054555e-54 | -8.615850e-47 |
| Msa0602460 | Msa1199990 | 0.806959 | 6.385308e-50 | -8.615850e-47 |
| Msa0847770 | Msa1199990 | 0.837426 | 5.236127e-57 | -8.615850e-47 |
| Msa0861090 | Msa1199990 | 0.812594 | 3.918414e-51 | -8.615850e-47 |
| Msa0869100 | Msa1199990 | 0.803575 | 3.264834e-49 | -8.615850e-47 |
| Msa0876190 | Msa1199990 | 0.800526 | 1.382774e-48 | -8.615850e-47 |
| Msa0880450 | Msa1199990 | 0.800490 | 1.406281e-48 | -8.615850e-47 |
| Msa0924470 | Msa1199990 | 0.812969 | 3.244792e-51 | -8.615850e-47 |
| Msa0933230 | Msa1199990 | 0.811505 | 6.768963e-51 | -8.615850e-47 |
| Msa0933310 | Msa1199990 | 0.814790 | 1.287810e-51 | -8.615850e-47 |
| Msa0945110 | Msa1199990 | 0.814861 | 1.241814e-51 | -8.615850e-47 |
| Msa0945970 | Msa1199990 | 0.826202 | 3.087568e-54 | -8.615850e-47 |
| Msa0947660 | Msa1199990 | 0.806828 | 6.806577e-50 | -8.615850e-47 |
| Msa0963270 | Msa1199990 | 0.823254 | 1.529242e-53 | -8.615850e-47 |
| Msa0966400 | Msa1199990 | 0.805579 | 1.247179e-49 | -8.615850e-47 |
| Msa0968590 | Msa1199990 | 0.809139 | 2.193577e-50 | -8.615850e-47 |
| Msa0969520 | Msa1199990 | 0.806026 | 1.004431e-49 | -8.615850e-47 |
| Msa0971090 | Msa1199990 | 0.818036 | 2.416861e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199990 | MtrunA17_Chr1g0170131 | 69.737 | 76 | 23 | 0 | 72 | 147 | 141 | 216 | 2.09e-26 | 102 |
| Msa1199990 | MtrunA17_Chr1g0156951 | 60.759 | 79 | 29 | 1 | 76 | 152 | 144 | 222 | 1.67e-22 | 92.4 |
| Msa1199990 | MtrunA17_Chr6g0450431 | 58.140 | 86 | 27 | 3 | 89 | 165 | 1 | 86 | 3.57e-20 | 82.4 |
| Msa1199990 | MtrunA17_Chr5g0420551 | 50.000 | 88 | 35 | 2 | 57 | 144 | 137 | 215 | 3.06e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGATAGAATGGTATTAAA+AGG | 0.219863 | 8_1:-52299790 | Msa1199990:CDS |
| ATTGTCTTTGGGGTTCTATT+CGG | 0.240004 | 8_1:-52298503 | Msa1199990:CDS |
| GGTGGCCTGCTATTGTCTTT+GGG | 0.240339 | 8_1:-52298514 | Msa1199990:CDS |
| TGGTGGCCTGCTATTGTCTT+TGG | 0.250761 | 8_1:-52298515 | Msa1199990:CDS |
| TGTGGCATAGCAGGGTTCTT+TGG | 0.318245 | 8_1:-52298472 | Msa1199990:CDS |
| TTGTCTTTGGGGTTCTATTC+GGG | 0.328544 | 8_1:-52298502 | Msa1199990:CDS |
| TTCCTAGGACATTTCACCTT+TGG | 0.357310 | 8_1:+52297993 | None:intergenic |
| ACGGAACTTTATAAAACTTA+AGG | 0.376636 | 8_1:+52298157 | None:intergenic |
| CGAGGAAGAGGAAGAGGAAG+AGG | 0.385217 | 8_1:-52300082 | Msa1199990:CDS |
| GAAGAAGAAGGGAGAAAATC+TGG | 0.388008 | 8_1:-52299929 | Msa1199990:CDS |
| GGTTAAGAGAAGAATTAGTT+TGG | 0.388719 | 8_1:-52298590 | Msa1199990:CDS |
| AGAGGAAGTGGAAGAGGAAG+AGG | 0.393476 | 8_1:-52300151 | Msa1199990:CDS |
| GGTGTTGACTGTGGCATAGC+AGG | 0.394517 | 8_1:-52298481 | Msa1199990:CDS |
| AGAAGAAGAGGAAGTGGAAG+AGG | 0.394857 | 8_1:-52300157 | Msa1199990:CDS |
| TGCTGGGAGCTGGCTGCAGC+GGG | 0.406548 | 8_1:-52298353 | Msa1199990:CDS |
| AGAAGACGAAGAAGAGGAAG+AGG | 0.408049 | 8_1:-52300115 | Msa1199990:CDS |
| AGTGGAAGAGGAAGAGGAAG+AGG | 0.420722 | 8_1:-52300145 | Msa1199990:CDS |
| GATAATCAAGGTGGCTAAGT+TGG | 0.425265 | 8_1:-52299884 | Msa1199990:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.426997 | 8_1:-52300139 | Msa1199990:CDS |
| CAAGAATGAAATGCAAACTA+TGG | 0.428127 | 8_1:-52299752 | Msa1199990:CDS |
| GTCAATGTGTTCGGCATCAA+AGG | 0.429558 | 8_1:+52298026 | None:intergenic |
| ACATTTCACCTTTGGAGAAA+GGG | 0.432582 | 8_1:+52298001 | None:intergenic |
| GACATTTCACCTTTGGAGAA+AGG | 0.438348 | 8_1:+52298000 | None:intergenic |
| GTGGCCTGCTATTGTCTTTG+GGG | 0.438758 | 8_1:-52298513 | Msa1199990:CDS |
| GGAAGACGAAGACGAGGAAG+AGG | 0.455608 | 8_1:-52300094 | Msa1199990:CDS |
| CGAAGACGAGGAAGAGGAAG+AGG | 0.461269 | 8_1:-52300088 | Msa1199990:CDS |
| GTGAGGTGAATGGTGATTTG+AGG | 0.461694 | 8_1:-52298561 | Msa1199990:CDS |
| AGAGAACCACTTGAAGAAGA+AGG | 0.464660 | 8_1:-52299941 | Msa1199990:intron |
| AGAGGAAGAAGACGAAGAAG+AGG | 0.466090 | 8_1:-52300121 | Msa1199990:CDS |
| TTATAGCCGTGGTGGCTTTG+TGG | 0.474791 | 8_1:-52298330 | Msa1199990:CDS |
| TTTCTCCCTTCTTCTTCAAG+TGG | 0.481048 | 8_1:+52299935 | None:intergenic |
| TAAGTTGGATAATTATTTGA+TGG | 0.483560 | 8_1:-52299869 | Msa1199990:CDS |
| GATTGAGTTTGTGTTCTAGT+GGG | 0.486628 | 8_1:-52298248 | Msa1199990:three_prime_UTR |
| AGGATAGAATGGTATTAAAA+GGG | 0.488471 | 8_1:-52299789 | Msa1199990:CDS |
| TGAAATTAGGCGAAAACATA+CGG | 0.491182 | 8_1:+52298138 | None:intergenic |
| GAAAGGGAAGTCAATGTGTT+CGG | 0.492655 | 8_1:+52298017 | None:intergenic |
| CAATAAGTTAAAAGAAAGAC+AGG | 0.493345 | 8_1:-52298117 | Msa1199990:three_prime_UTR |
| GATAGTGTTGATGTTGATGC+TGG | 0.519920 | 8_1:-52300027 | Msa1199990:CDS |
| TTGCTGGGAGCTGGCTGCAG+CGG | 0.522395 | 8_1:-52298354 | Msa1199990:CDS |
| GAGTTTGTGTTCTAGTGGGG+TGG | 0.523128 | 8_1:-52298244 | Msa1199990:three_prime_UTR |
| TTGGCCTCTTGTGAGGTGAA+TGG | 0.526844 | 8_1:-52298571 | Msa1199990:CDS |
| GGATTGAGTTTGTGTTCTAG+TGG | 0.527429 | 8_1:-52298249 | Msa1199990:three_prime_UTR |
| AGAACCCCAAAGACAATAGC+AGG | 0.529164 | 8_1:+52298509 | None:intergenic |
| CAATTCTCTAGAGGATAGAA+TGG | 0.530815 | 8_1:-52299800 | Msa1199990:CDS |
| ATTGACTTCCCTTTCTCCAA+AGG | 0.531506 | 8_1:-52298009 | Msa1199990:three_prime_UTR |
| TGTTGATGCTGGAGAGAAAG+AGG | 0.532391 | 8_1:-52300016 | Msa1199990:CDS |
| ATGCTTCTTATGAGCTGCAA+AGG | 0.533894 | 8_1:-52299498 | Msa1199990:CDS |
| ATTGAGTTTGTGTTCTAGTG+GGG | 0.534072 | 8_1:-52298247 | Msa1199990:three_prime_UTR |
| CCTTATAAAACCACTGCACA+TGG | 0.542453 | 8_1:+52298182 | None:intergenic |
| GAGAACCACTTGAAGAAGAA+GGG | 0.552372 | 8_1:-52299940 | Msa1199990:CDS |
| AATTAGTTTGGCCTCTTGTG+AGG | 0.555483 | 8_1:-52298578 | Msa1199990:CDS |
| TAGAACACAAACTCAATCCC+AGG | 0.560061 | 8_1:+52298253 | None:intergenic |
| CAAGTCTATCAATTCTCTAG+AGG | 0.569018 | 8_1:-52299809 | Msa1199990:CDS |
| TGCACAATGGATGATAATCA+AGG | 0.575904 | 8_1:-52299896 | Msa1199990:CDS |
| GCTGCAGCGGGTTATAGCCG+TGG | 0.578545 | 8_1:-52298341 | Msa1199990:CDS |
| TCAATGTGTTCGGCATCAAA+GGG | 0.581031 | 8_1:+52298027 | None:intergenic |
| AGAAGAAGAGCAGATGAACT+CGG | 0.582235 | 8_1:-52299992 | Msa1199990:intron |
| GGAAGAGGAAGACGAAGACG+AGG | 0.584300 | 8_1:-52300100 | Msa1199990:CDS |
| GTGTTGACTGTGGCATAGCA+GGG | 0.585224 | 8_1:-52298480 | Msa1199990:CDS |
| TTCTATTCGGGTGTTGACTG+TGG | 0.585419 | 8_1:-52298490 | Msa1199990:CDS |
| ATCACCATTCACCTCACAAG+AGG | 0.594909 | 8_1:+52298567 | None:intergenic |
| TTTGTTTAGGCCATGTGCAG+TGG | 0.597477 | 8_1:-52298192 | Msa1199990:three_prime_UTR |
| CGATGAGCAGCAGAAAGAGA+AGG | 0.612760 | 8_1:-52299470 | Msa1199990:intron |
| GCAGCGGGTTATAGCCGTGG+TGG | 0.619905 | 8_1:-52298338 | Msa1199990:CDS |
| TGGATAATCTCAATGCACAA+TGG | 0.628707 | 8_1:-52299909 | Msa1199990:CDS |
| GAATGAAATGCAAACTATGG+AGG | 0.629276 | 8_1:-52299749 | Msa1199990:CDS |
| ACAAACTCAATCCCAGGGAG+TGG | 0.630710 | 8_1:+52298259 | None:intergenic |
| GACTAGCCACAAAGCCACCA+CGG | 0.651795 | 8_1:+52298324 | None:intergenic |
| ATGTGTTCGGCATCAAAGGG+AGG | 0.668274 | 8_1:+52298030 | None:intergenic |
| AGAACACAAACTCAATCCCA+GGG | 0.675458 | 8_1:+52298254 | None:intergenic |
| ACAATGGATGATAATCAAGG+TGG | 0.763777 | 8_1:-52299893 | Msa1199990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTTTTTTAGACAAA+AGG | + | chr8_1:52298969-52298988 | None:intergenic | 10.0% |
| !!! | TAAACATTTAACTTAAATAA+TGG | + | chr8_1:52299237-52299256 | None:intergenic | 10.0% |
| !!! | CACTATATAATAAATAATTT+TGG | - | chr8_1:52299453-52299472 | Msa1199990:intron | 10.0% |
| !! | AAAGAAAAAACTTAAAAAAT+AGG | - | chr8_1:52301273-52301292 | Msa1199990:intron | 10.0% |
| !! | AATATATAATAAAACCTAAA+AGG | + | chr8_1:52301372-52301391 | None:intergenic | 10.0% |
| !!! | TTTTAGGTTTTATTATATAT+TGG | - | chr8_1:52301371-52301390 | Msa1199990:intron | 10.0% |
| !!! | ATTTTTTTTTTATATGTAGA+AGG | - | chr8_1:52301758-52301777 | Msa1199990:intron | 10.0% |
| !!! | TCAAATTATGAATTTTTACA+AGG | - | chr8_1:52299270-52299289 | Msa1199990:intron | 15.0% |
| !!! | AAATCATGTACAATTATTTT+TGG | - | chr8_1:52299505-52299524 | Msa1199990:CDS | 15.0% |
| !!! | ATAGTAATTAATTTGAAGTA+TGG | + | chr8_1:52301526-52301545 | None:intergenic | 15.0% |
| !!! | TCTTTTAACTTATTGAAATT+AGG | + | chr8_1:52302065-52302084 | None:intergenic | 15.0% |
| !!! | TTTCATTTTTATCTCTTACA+CGG | + | chr8_1:52298038-52298057 | None:intergenic | 20.0% |
| !! | GAGATAAGTAATTAGAAAAA+TGG | - | chr8_1:52298072-52298091 | Msa1199990:three_prime_UTR | 20.0% |
| !! | ATATGAGGTATGATATTAAT+TGG | - | chr8_1:52298347-52298366 | Msa1199990:CDS | 20.0% |
| !! | ATGTATTCTCATTTATACAT+GGG | - | chr8_1:52298887-52298906 | Msa1199990:intron | 20.0% |
| !! | AAAAAAATGATACAGAGATT+GGG | + | chr8_1:52298929-52298948 | None:intergenic | 20.0% |
| !! | AAAAAAAATGATACAGAGAT+TGG | + | chr8_1:52298930-52298949 | None:intergenic | 20.0% |
| !!! | TATTTTGAAATTCCAATACA+TGG | - | chr8_1:52299086-52299105 | Msa1199990:intron | 20.0% |
| !!! | CATTGAGGTAAAAATTATTT+TGG | + | chr8_1:52299158-52299177 | None:intergenic | 20.0% |
| !!! | TCTTAAGCGATATTTTTTAA+AGG | + | chr8_1:52299188-52299207 | None:intergenic | 20.0% |
| !!! | GAATTTTTACAAGGATTTTT+TGG | - | chr8_1:52299279-52299298 | Msa1199990:intron | 20.0% |
| !! | TAGTGAAAAAACAACAAATT+TGG | - | chr8_1:52299479-52299498 | Msa1199990:CDS | 20.0% |
| !!! | TAAGTTGGATAATTATTTGA+TGG | - | chr8_1:52300318-52300337 | Msa1199990:intron | 20.0% |
| !! | AACTCTTATAATACTTATTC+AGG | - | chr8_1:52300658-52300677 | Msa1199990:intron | 20.0% |
| !! | ACTCTTATAATACTTATTCA+GGG | - | chr8_1:52300659-52300678 | Msa1199990:intron | 20.0% |
| !! | AACTATGATGAATTGAAAAA+CGG | + | chr8_1:52300996-52301015 | None:intergenic | 20.0% |
| !! | AATTGAAATTATGAAACATG+AGG | + | chr8_1:52301173-52301192 | None:intergenic | 20.0% |
| !! | TCATGTTTCATAATTTCAAT+TGG | - | chr8_1:52301172-52301191 | Msa1199990:intron | 20.0% |
| !! | CTGTTAGATAATAAGTTATT+AGG | - | chr8_1:52301305-52301324 | Msa1199990:intron | 20.0% |
| !! | TATCATAACTCATTAAACTA+AGG | + | chr8_1:52301405-52301424 | None:intergenic | 20.0% |
| ! | TTAGAAAAATGGACAAAAGA+AGG | - | chr8_1:52298083-52298102 | Msa1199990:three_prime_UTR | 25.0% |
| !! | TTCTTCTTTTTCCAATTGTT+GGG | + | chr8_1:52298168-52298187 | None:intergenic | 25.0% |
| ! | ATTCCTCATATTTGATATCA+TGG | + | chr8_1:52298277-52298296 | None:intergenic | 25.0% |
| ! | TGAATATATGGTCAAATATG+AGG | - | chr8_1:52298332-52298351 | Msa1199990:CDS | 25.0% |
| !!! | TAAGTTTTTTATATGTGCCT+CGG | - | chr8_1:52298374-52298393 | Msa1199990:CDS | 25.0% |
| !!! | TATGGTTTTATTAACCCAAA+AGG | - | chr8_1:52298421-52298440 | Msa1199990:intron | 25.0% |
| !!! | ATGGTTTTATTAACCCAAAA+GGG | - | chr8_1:52298422-52298441 | Msa1199990:intron | 25.0% |
| ! | AAGGGTTATAATTTGATGAA+TGG | + | chr8_1:52298725-52298744 | None:intergenic | 25.0% |
| !!! | CTTCATCTTTTTTTGTAATC+TGG | - | chr8_1:52298767-52298786 | Msa1199990:intron | 25.0% |
| !! | TTTGTTTGTTAGGATTGATT+AGG | - | chr8_1:52298836-52298855 | Msa1199990:intron | 25.0% |
| !! | TTGTTTGTTAGGATTGATTA+GGG | - | chr8_1:52298837-52298856 | Msa1199990:intron | 25.0% |
| ! | GATGTATTCTCATTTATACA+TGG | - | chr8_1:52298886-52298905 | Msa1199990:intron | 25.0% |
| ! | AAAAAATGATACAGAGATTG+GGG | + | chr8_1:52298928-52298947 | None:intergenic | 25.0% |
| ! | TCAAAATAGTCATTCAATGT+TGG | + | chr8_1:52299021-52299040 | None:intergenic | 25.0% |
| !! | TTTAAAGGTTTAGAACATTG+AGG | + | chr8_1:52299173-52299192 | None:intergenic | 25.0% |
| ! | TTAACTTAAATAATGGCGAA+AGG | + | chr8_1:52299230-52299249 | None:intergenic | 25.0% |
| ! | ATTAGAGAAGATAGATAGTA+TGG | + | chr8_1:52299596-52299615 | None:intergenic | 25.0% |
| ! | TCTAATTCTATCGAAACAAA+CGG | - | chr8_1:52299610-52299629 | Msa1199990:intron | 25.0% |
| ! | AGGATAGAATGGTATTAAAA+GGG | - | chr8_1:52300398-52300417 | Msa1199990:intron | 25.0% |
| !! | CTTTGAAAATGAAATTAGCA+AGG | + | chr8_1:52300526-52300545 | None:intergenic | 25.0% |
| ! | CTCTTATAATACTTATTCAG+GGG | - | chr8_1:52300660-52300679 | Msa1199990:intron | 25.0% |
| ! | TCATCTTATAAACATGTAGT+AGG | - | chr8_1:52300770-52300789 | Msa1199990:intron | 25.0% |
| !!! | TTCATTGATTTTTCCTCATT+TGG | + | chr8_1:52301147-52301166 | None:intergenic | 25.0% |
| ! | ATAGTTATTCTATTGAAACC+TGG | - | chr8_1:52301424-52301443 | Msa1199990:intron | 25.0% |
| ! | ATTCCGATTTAATCATGTTA+TGG | - | chr8_1:52301559-52301578 | Msa1199990:intron | 25.0% |
| ! | AAGCCATAACATGATTAAAT+CGG | + | chr8_1:52301565-52301584 | None:intergenic | 25.0% |
| !!! | GGTTTTTTACTTTAGTGTAT+TGG | - | chr8_1:52301964-52301983 | Msa1199990:intron | 25.0% |
| !!! | ATTGGCTTTTGTTTTTGTTT+AGG | - | chr8_1:52301982-52302001 | Msa1199990:intron | 25.0% |
| ! | ACGGAACTTTATAAAACTTA+AGG | + | chr8_1:52302033-52302052 | None:intergenic | 25.0% |
| ! | CAATAAGTTAAAAGAAAGAC+AGG | - | chr8_1:52302070-52302089 | Msa1199990:intron | 25.0% |
| TACTTATCTCTTAAGAGTGA+GGG | + | chr8_1:52298062-52298081 | None:intergenic | 30.0% | |
| TTACTTATCTCTTAAGAGTG+AGG | + | chr8_1:52298063-52298082 | None:intergenic | 30.0% | |
| ! | TCTTCTTTTTCCAATTGTTG+GGG | + | chr8_1:52298167-52298186 | None:intergenic | 30.0% |
| ! | CTTCTTCTTTTTCCAATTGT+TGG | + | chr8_1:52298169-52298188 | None:intergenic | 30.0% |
| CAACAATTGGAAAAAGAAGA+AGG | - | chr8_1:52298167-52298186 | Msa1199990:three_prime_UTR | 30.0% | |
| TCACCATGATATCAAATATG+AGG | - | chr8_1:52298271-52298290 | Msa1199990:three_prime_UTR | 30.0% | |
| ACCATATATTCATACGTTGT+GGG | + | chr8_1:52298324-52298343 | None:intergenic | 30.0% | |
| TTAATAAAACCATACCCTTC+CGG | + | chr8_1:52298415-52298434 | None:intergenic | 30.0% | |
| AGCGATTGTATGGATAAAAA+GGG | + | chr8_1:52298743-52298762 | None:intergenic | 30.0% | |
| TAACAAACAAACATTCCTCA+CGG | + | chr8_1:52298827-52298846 | None:intergenic | 30.0% | |
| ACATCGTAATAATACAAACC+AGG | + | chr8_1:52298871-52298890 | None:intergenic | 30.0% | |
| AAAAATGATACAGAGATTGG+GGG | + | chr8_1:52298927-52298946 | None:intergenic | 30.0% | |
| TTGAAATTCCAATACATGGT+TGG | - | chr8_1:52299090-52299109 | Msa1199990:intron | 30.0% | |
| AATCACATACGACTCTTATT+TGG | - | chr8_1:52299305-52299324 | Msa1199990:intron | 30.0% | |
| AAATCCTTAAAGAATGTTCG+AGG | - | chr8_1:52299408-52299427 | Msa1199990:intron | 30.0% | |
| GTAGAACTAAAGACAACTTA+CGG | - | chr8_1:52299527-52299546 | Msa1199990:intron | 30.0% | |
| GAAAAAAGGAAAACGTAAAG+AGG | + | chr8_1:52299745-52299764 | None:intergenic | 30.0% | |
| TTCTTGAATCAACTCTTGAA+AGG | + | chr8_1:52299832-52299851 | None:intergenic | 30.0% | |
| TTCAAATTGCGTATCAAAGA+AGG | - | chr8_1:52299986-52300005 | Msa1199990:intron | 30.0% | |
| GAGGATAGAATGGTATTAAA+AGG | - | chr8_1:52300397-52300416 | Msa1199990:intron | 30.0% | |
| CAAGAATGAAATGCAAACTA+TGG | - | chr8_1:52300435-52300454 | Msa1199990:intron | 30.0% | |
| AAATGAAATTAGCAAGGCAA+AGG | + | chr8_1:52300520-52300539 | None:intergenic | 30.0% | |
| ACATGAAATTAGTAAAGCAG+AGG | + | chr8_1:52300602-52300621 | None:intergenic | 30.0% | |
| CTAATTTCATGTCCTGTATT+CGG | - | chr8_1:52300610-52300629 | Msa1199990:intron | 30.0% | |
| TAATTTCATGTCCTGTATTC+GGG | - | chr8_1:52300611-52300630 | Msa1199990:intron | 30.0% | |
| TGATGGAAAGAATCCTAAAT+CGG | - | chr8_1:52300746-52300765 | Msa1199990:intron | 30.0% | |
| ! | TTTATAAGATGAGCCGATTT+AGG | + | chr8_1:52300762-52300781 | None:intergenic | 30.0% |
| ! | TACTTGAAACTTTGAAGATG+AGG | + | chr8_1:52300849-52300868 | None:intergenic | 30.0% |
| TTGATTCCACAGAAGAAATT+GGG | + | chr8_1:52300924-52300943 | None:intergenic | 30.0% | |
| ! | ATTGATTCCACAGAAGAAAT+TGG | + | chr8_1:52300925-52300944 | None:intergenic | 30.0% |
| AATTTCTTCTGTGGAATCAA+TGG | - | chr8_1:52300924-52300943 | Msa1199990:intron | 30.0% | |
| ! | TAAGACAAAGTTCACTCTTT+TGG | + | chr8_1:52301088-52301107 | None:intergenic | 30.0% |
| ! | TTTTTCCTCATTTGGTTAGT+GGG | + | chr8_1:52301139-52301158 | None:intergenic | 30.0% |
| ! | ATTTTTCCTCATTTGGTTAG+TGG | + | chr8_1:52301140-52301159 | None:intergenic | 30.0% |
| ! | AGAAGACTTCAACTCTAAAA+TGG | + | chr8_1:52301204-52301223 | None:intergenic | 30.0% |
| AGAGAACAAAACAAAAACGA+CGG | + | chr8_1:52301450-52301469 | None:intergenic | 30.0% | |
| TTCTCTTAACCTAAAAGAAG+AGG | + | chr8_1:52301588-52301607 | None:intergenic | 30.0% | |
| GGTTAAGAGAAGAATTAGTT+TGG | - | chr8_1:52301597-52301616 | Msa1199990:intron | 30.0% | |
| !!! | GTTTTTTGAATTCTGTTGCA+TGG | - | chr8_1:52301784-52301803 | Msa1199990:intron | 30.0% |
| AACAACAAAAACTCTACTAG+TGG | + | chr8_1:52301896-52301915 | None:intergenic | 30.0% | |
| TGAAATTAGGCGAAAACATA+CGG | + | chr8_1:52302052-52302071 | None:intergenic | 30.0% | |
| AAAATGAATCCCCCAACAAT+TGG | - | chr8_1:52298154-52298173 | Msa1199990:three_prime_UTR | 35.0% | |
| ! | CTTCTTTTTCCAATTGTTGG+GGG | + | chr8_1:52298166-52298185 | None:intergenic | 35.0% |
| TTCGTCTATGTTTGATGTGA+CGG | - | chr8_1:52298197-52298216 | Msa1199990:three_prime_UTR | 35.0% | |
| CAGTGCGTATGTTAAAATCA+TGG | - | chr8_1:52298224-52298243 | Msa1199990:three_prime_UTR | 35.0% | |
| ATGGCGAATCATTGTGATTT+GGG | - | chr8_1:52298243-52298262 | Msa1199990:three_prime_UTR | 35.0% | |
| ACCCACAACGTATGAATATA+TGG | - | chr8_1:52298320-52298339 | Msa1199990:CDS | 35.0% | |
| GACCATATATTCATACGTTG+TGG | + | chr8_1:52298325-52298344 | None:intergenic | 35.0% | |
| ! | TTTTTATATGTGCCTCGGTT+TGG | - | chr8_1:52298379-52298398 | Msa1199990:CDS | 35.0% |
| TAATAAAACCATACCCTTCC+GGG | + | chr8_1:52298414-52298433 | None:intergenic | 35.0% | |
| ATTAACCCAAAAGGGATGTT+TGG | - | chr8_1:52298430-52298449 | Msa1199990:intron | 35.0% | |
| ! | TGTAACCAAACATCCCTTTT+GGG | + | chr8_1:52298438-52298457 | None:intergenic | 35.0% |
| GATGTTTGGTTACAGTGTAT+TGG | - | chr8_1:52298444-52298463 | Msa1199990:intron | 35.0% | |
| GATTGAATCTCTGATGTTTC+AGG | - | chr8_1:52298524-52298543 | Msa1199990:CDS | 35.0% | |
| ! | AACTGTCTTCTTTTCTGTCT+CGG | - | chr8_1:52298596-52298615 | Msa1199990:intron | 35.0% |
| GAGCGATTGTATGGATAAAA+AGG | + | chr8_1:52298744-52298763 | None:intergenic | 35.0% | |
| GTGAGGAATGTTTGTTTGTT+AGG | - | chr8_1:52298826-52298845 | Msa1199990:intron | 35.0% | |
| TCGTAATAATACAAACCAGG+TGG | + | chr8_1:52298868-52298887 | None:intergenic | 35.0% | |
| TTCTCATTTATACATGGGTC+AGG | - | chr8_1:52298892-52298911 | Msa1199990:intron | 35.0% | |
| AAAATGATACAGAGATTGGG+GGG | + | chr8_1:52298926-52298945 | None:intergenic | 35.0% | |
| ACTAATGACCAACCATGTAT+TGG | + | chr8_1:52299101-52299120 | None:intergenic | 35.0% | |
| ! | AATACATGGTTGGTCATTAG+TGG | - | chr8_1:52299100-52299119 | Msa1199990:intron | 35.0% |
| GTATCCTCGAACATTCTTTA+AGG | + | chr8_1:52299415-52299434 | None:intergenic | 35.0% | |
| !!! | TTTCCTTTCCCCTTTTTTAC+CGG | - | chr8_1:52299652-52299671 | Msa1199990:intron | 35.0% |
| AAAAGGAAAACGTAAAGAGG+TGG | + | chr8_1:52299742-52299761 | None:intergenic | 35.0% | |
| ! | TACGTTTTCCTTTTTTCCGA+TGG | - | chr8_1:52299748-52299767 | Msa1199990:CDS | 35.0% |
| ATTTCGATCAACAGTTCATC+CGG | + | chr8_1:52299809-52299828 | None:intergenic | 35.0% | |
| ! | AGTTGATTCAAGAAATCACC+TGG | - | chr8_1:52299838-52299857 | Msa1199990:CDS | 35.0% |
| AGGTGATTCTTCATGAAATG+AGG | + | chr8_1:52299908-52299927 | None:intergenic | 35.0% | |
| !! | GAAAGCATTGAAGTGTTCAA+CGG | + | chr8_1:52299969-52299988 | None:intergenic | 35.0% |
| AAATTGCGTATCAAAGAAGG+AGG | - | chr8_1:52299989-52300008 | Msa1199990:intron | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+AGG | - | chr8_1:52300012-52300031 | Msa1199990:CDS | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+TGG | - | chr8_1:52300013-52300032 | Msa1199990:CDS | 35.0% | |
| TGGATAATCTCAATGCACAA+TGG | - | chr8_1:52300278-52300297 | Msa1199990:intron | 35.0% | |
| TGCACAATGGATGATAATCA+AGG | - | chr8_1:52300291-52300310 | Msa1199990:intron | 35.0% | |
| ACAATGGATGATAATCAAGG+TGG | - | chr8_1:52300294-52300313 | Msa1199990:intron | 35.0% | |
| CAAGTCTATCAATTCTCTAG+AGG | - | chr8_1:52300378-52300397 | Msa1199990:intron | 35.0% | |
| ! | CAATTCTCTAGAGGATAGAA+TGG | - | chr8_1:52300387-52300406 | Msa1199990:intron | 35.0% |
| GAATGAAATGCAAACTATGG+AGG | - | chr8_1:52300438-52300457 | Msa1199990:intron | 35.0% | |
| AATTTCATGTCCTGTATTCG+GGG | - | chr8_1:52300612-52300631 | Msa1199990:intron | 35.0% | |
| GAAAGAGAAGGTAGAATTGA+TGG | - | chr8_1:52300729-52300748 | Msa1199990:intron | 35.0% | |
| TTCTATAACAGCACTGTATC+TGG | - | chr8_1:52300814-52300833 | Msa1199990:intron | 35.0% | |
| TGATTCCACAGAAGAAATTG+GGG | + | chr8_1:52300923-52300942 | None:intergenic | 35.0% | |
| TCCTATTGCATGATGAAGTT+TGG | - | chr8_1:52301042-52301061 | Msa1199990:intron | 35.0% | |
| ACCAAACTTCATCATGCAAT+AGG | + | chr8_1:52301046-52301065 | None:intergenic | 35.0% | |
| AGTTATTAGGCTCATGTTGT+TGG | - | chr8_1:52301318-52301337 | Msa1199990:intron | 35.0% | |
| GTTATTAGGCTCATGTTGTT+GGG | - | chr8_1:52301319-52301338 | Msa1199990:intron | 35.0% | |
| ! | GAAGTTAGTAGACTCCTTTT+AGG | - | chr8_1:52301355-52301374 | Msa1199990:intron | 35.0% |
| ACAATACATAGAGCTAGAGA+CGG | + | chr8_1:52301480-52301499 | None:intergenic | 35.0% | |
| ! | TTATGGCTTCCTCTTCTTTT+AGG | - | chr8_1:52301576-52301595 | Msa1199990:intron | 35.0% |
| !! | TTGAGGCTTGTTCTTTTACT+TGG | - | chr8_1:52301643-52301662 | Msa1199990:intron | 35.0% |
| !! | ATTGTCTTTGGGGTTCTATT+CGG | - | chr8_1:52301684-52301703 | Msa1199990:intron | 35.0% |
| !!! | ACTTTTCTGGTTTTGTTGCT+GGG | - | chr8_1:52301818-52301837 | Msa1199990:intron | 35.0% |
| GATTGAGTTTGTGTTCTAGT+GGG | - | chr8_1:52301939-52301958 | Msa1199990:intron | 35.0% | |
| ATTGAGTTTGTGTTCTAGTG+GGG | - | chr8_1:52301940-52301959 | Msa1199990:intron | 35.0% | |
| ! | ACATTTCACCTTTGGAGAAA+GGG | + | chr8_1:52302189-52302208 | None:intergenic | 35.0% |
| ! | GTTGGGGGATTCATTTTAGA+CGG | + | chr8_1:52298151-52298170 | None:intergenic | 40.0% |
| CATGGCGAATCATTGTGATT+TGG | - | chr8_1:52298242-52298261 | Msa1199990:three_prime_UTR | 40.0% | |
| ! | CTGTAACCAAACATCCCTTT+TGG | + | chr8_1:52298439-52298458 | None:intergenic | 40.0% |
| GTTCAAGCGCATCTTGAAAT+TGG | - | chr8_1:52298484-52298503 | Msa1199990:CDS | 40.0% | |
| AAAAGAAGACAGTTCCAGAG+TGG | + | chr8_1:52298590-52298609 | None:intergenic | 40.0% | |
| !! | TGTCTGTTGCTTTGTTCATG+AGG | - | chr8_1:52298659-52298678 | Msa1199990:intron | 40.0% |
| ! | TGCTTTGTTCATGAGGTTGT+TGG | - | chr8_1:52298666-52298685 | Msa1199990:intron | 40.0% |
| TTCATGAGGTTGTTGGTACA+TGG | - | chr8_1:52298673-52298692 | Msa1199990:intron | 40.0% | |
| ATGAAGAGTGAGCGATTGTA+TGG | + | chr8_1:52298753-52298772 | None:intergenic | 40.0% | |
| TTGTTAGGATTGATTAGGGC+TGG | - | chr8_1:52298841-52298860 | Msa1199990:intron | 40.0% | |
| ! | TCTATCGAAACAAACGGACT+CGG | - | chr8_1:52299616-52299635 | Msa1199990:intron | 40.0% |
| ! | GTTTTCCTTTTTTCCGATGG+CGG | - | chr8_1:52299751-52299770 | Msa1199990:CDS | 40.0% |
| TTTCGATCAACAGTTCATCC+GGG | + | chr8_1:52299808-52299827 | None:intergenic | 40.0% | |
| ACGACTTAGAGTAACGAGAT+CGG | + | chr8_1:52299942-52299961 | None:intergenic | 40.0% | |
| TCTCGTTACTCTAAGTCGTA+AGG | - | chr8_1:52299943-52299962 | Msa1199990:intron | 40.0% | |
| AGAAGAAGAAGAAGAGGAAG+TGG | - | chr8_1:52300024-52300043 | Msa1199990:CDS | 40.0% | |
| !! | GATAGTGTTGATGTTGATGC+TGG | - | chr8_1:52300160-52300179 | Msa1199990:CDS | 40.0% |
| AGAAGAAGAGCAGATGAACT+CGG | - | chr8_1:52300195-52300214 | Msa1199990:intron | 40.0% | |
| AGAGAACCACTTGAAGAAGA+AGG | - | chr8_1:52300246-52300265 | Msa1199990:intron | 40.0% | |
| GAGAACCACTTGAAGAAGAA+GGG | - | chr8_1:52300247-52300266 | Msa1199990:intron | 40.0% | |
| TTTCTCCCTTCTTCTTCAAG+TGG | + | chr8_1:52300255-52300274 | None:intergenic | 40.0% | |
| GAAGAAGAAGGGAGAAAATC+TGG | - | chr8_1:52300258-52300277 | Msa1199990:intron | 40.0% | |
| GATAATCAAGGTGGCTAAGT+TGG | - | chr8_1:52300303-52300322 | Msa1199990:intron | 40.0% | |
| CAAACTAATACCCCGAATAC+AGG | + | chr8_1:52300625-52300644 | None:intergenic | 40.0% | |
| ATGCTTCTTATGAGCTGCAA+AGG | - | chr8_1:52300689-52300708 | Msa1199990:intron | 40.0% | |
| ! | AAACTTTGAAGATGAGGCAC+AGG | + | chr8_1:52300843-52300862 | None:intergenic | 40.0% |
| TTCTTCCCCAATTTCTTCTG+TGG | - | chr8_1:52300915-52300934 | Msa1199990:intron | 40.0% | |
| ! | AATTAGTTTGGCCTCTTGTG+AGG | - | chr8_1:52301609-52301628 | Msa1199990:intron | 40.0% |
| !! | AGGCTTGTTCTTTTACTTGG+AGG | - | chr8_1:52301646-52301665 | Msa1199990:intron | 40.0% |
| !! | GGCTTGTTCTTTTACTTGGA+GGG | - | chr8_1:52301647-52301666 | Msa1199990:intron | 40.0% |
| ! | GCTTGTTCTTTTACTTGGAG+GGG | - | chr8_1:52301648-52301667 | Msa1199990:intron | 40.0% |
| !! | TTGTCTTTGGGGTTCTATTC+GGG | - | chr8_1:52301685-52301704 | Msa1199990:intron | 40.0% |
| !! | GGTCTTCTGATTCACTTTTC+TGG | - | chr8_1:52301805-52301824 | Msa1199990:intron | 40.0% |
| !!! | CACTTTTCTGGTTTTGTTGC+TGG | - | chr8_1:52301817-52301836 | Msa1199990:intron | 40.0% |
| AGAACACAAACTCAATCCCA+GGG | + | chr8_1:52301936-52301955 | None:intergenic | 40.0% | |
| TAGAACACAAACTCAATCCC+AGG | + | chr8_1:52301937-52301956 | None:intergenic | 40.0% | |
| GGATTGAGTTTGTGTTCTAG+TGG | - | chr8_1:52301938-52301957 | Msa1199990:intron | 40.0% | |
| CCTTATAAAACCACTGCACA+TGG | + | chr8_1:52302008-52302027 | None:intergenic | 40.0% | |
| !!! | CCATGTGCAGTGGTTTTATA+AGG | - | chr8_1:52302005-52302024 | Msa1199990:intron | 40.0% |
| TCAATGTGTTCGGCATCAAA+GGG | + | chr8_1:52302163-52302182 | None:intergenic | 40.0% | |
| GAAAGGGAAGTCAATGTGTT+CGG | + | chr8_1:52302173-52302192 | None:intergenic | 40.0% | |
| ! | ATTGACTTCCCTTTCTCCAA+AGG | - | chr8_1:52302178-52302197 | Msa1199990:intron | 40.0% |
| ! | GACATTTCACCTTTGGAGAA+AGG | + | chr8_1:52302190-52302209 | None:intergenic | 40.0% |
| ! | GGGGATTCATTTTAGACGGT+AGG | + | chr8_1:52298147-52298166 | None:intergenic | 45.0% |
| GTCTATGTTTGATGTGACGG+TGG | - | chr8_1:52298200-52298219 | Msa1199990:three_prime_UTR | 45.0% | |
| !! | TCGGTTTGGTTTCGTAAACC+CGG | - | chr8_1:52298393-52298412 | Msa1199990:CDS | 45.0% |
| ! | TTTGGTTTCGTAAACCCGGA+AGG | - | chr8_1:52298397-52298416 | Msa1199990:CDS | 45.0% |
| TTGGTTTCGTAAACCCGGAA+GGG | - | chr8_1:52298398-52298417 | Msa1199990:CDS | 45.0% | |
| !! | TATTGGCTTATCCCACGATC+TGG | - | chr8_1:52298461-52298480 | Msa1199990:intron | 45.0% |
| ! | ATTGGCTTATCCCACGATCT+GGG | - | chr8_1:52298462-52298481 | Msa1199990:intron | 45.0% |
| GCATCTTGAAATTGGTGCGT+TGG | - | chr8_1:52298492-52298511 | Msa1199990:CDS | 45.0% | |
| CATAACATTCCGCAATCGCA+GGG | + | chr8_1:52298623-52298642 | None:intergenic | 45.0% | |
| ACATAACATTCCGCAATCGC+AGG | + | chr8_1:52298624-52298643 | None:intergenic | 45.0% | |
| CATGGATCTTGAAACCACGT+CGG | - | chr8_1:52298691-52298710 | Msa1199990:intron | 45.0% | |
| TTTGCTAAGTTACGTCCGTG+AGG | - | chr8_1:52298809-52298828 | Msa1199990:intron | 45.0% | |
| AGAAGTAAGATCGTGGAGAG+TGG | + | chr8_1:52299568-52299587 | None:intergenic | 45.0% | |
| GGAAGAGAGAAGTAAGATCG+TGG | + | chr8_1:52299575-52299594 | None:intergenic | 45.0% | |
| !!! | CGGATAGAGTTTTGAGTGAG+AGG | + | chr8_1:52299681-52299700 | None:intergenic | 45.0% |
| CAAGAAATCACCTGGAGTTG+AGG | - | chr8_1:52299846-52299865 | Msa1199990:CDS | 45.0% | |
| AGAAGAAGAGGAAGTGGAAG+AGG | - | chr8_1:52300030-52300049 | Msa1199990:CDS | 45.0% | |
| AGAGGAAGAAGACGAAGAAG+AGG | - | chr8_1:52300066-52300085 | Msa1199990:CDS | 45.0% | |
| AGAAGACGAAGAAGAGGAAG+AGG | - | chr8_1:52300072-52300091 | Msa1199990:CDS | 45.0% | |
| TGTTGATGCTGGAGAGAAAG+AGG | - | chr8_1:52300171-52300190 | Msa1199990:CDS | 45.0% | |
| CTCATTTGGTTAGTGGGAGA+AGG | + | chr8_1:52301133-52301152 | None:intergenic | 45.0% | |
| CTTCTCCCACTAACCAAATG+AGG | - | chr8_1:52301131-52301150 | Msa1199990:intron | 45.0% | |
| ACAAAACAAAAACGACGGCC+AGG | + | chr8_1:52301445-52301464 | None:intergenic | 45.0% | |
| ATCACCATTCACCTCACAAG+AGG | + | chr8_1:52301623-52301642 | None:intergenic | 45.0% | |
| GTGAGGTGAATGGTGATTTG+AGG | - | chr8_1:52301626-52301645 | Msa1199990:intron | 45.0% | |
| ! | GTTCTTTTACTTGGAGGGGT+TGG | - | chr8_1:52301652-52301671 | Msa1199990:intron | 45.0% |
| AGAACCCCAAAGACAATAGC+AGG | + | chr8_1:52301681-52301700 | None:intergenic | 45.0% | |
| !! | TTCTATTCGGGTGTTGACTG+TGG | - | chr8_1:52301697-52301716 | Msa1199990:intron | 45.0% |
| ! | ACTTGAATTTTGCCACTCCC+TGG | - | chr8_1:52301916-52301935 | Msa1199990:intron | 45.0% |
| ! | CTTGAATTTTGCCACTCCCT+GGG | - | chr8_1:52301917-52301936 | Msa1199990:intron | 45.0% |
| TTTGTTTAGGCCATGTGCAG+TGG | - | chr8_1:52301995-52302014 | Msa1199990:intron | 45.0% | |
| GTCAATGTGTTCGGCATCAA+AGG | + | chr8_1:52302164-52302183 | None:intergenic | 45.0% | |
| !!! | ATAAGAAATTATTTTATAAA+AGG | + | chr8_1:52299384-52299403 | None:intergenic | 5.0% |
| GGGTTTACGAAACCAAACCG+AGG | + | chr8_1:52298394-52298413 | None:intergenic | 50.0% | |
| TTCGTAAACCCGGAAGGGTA+TGG | - | chr8_1:52298403-52298422 | Msa1199990:CDS | 50.0% | |
| TCAGGTCTGTTGAGATCTGC+AGG | - | chr8_1:52298542-52298561 | Msa1199990:CDS | 50.0% | |
| AGAAGACAGTTCCAGAGTGG+AGG | + | chr8_1:52298587-52298606 | None:intergenic | 50.0% | |
| ! | TCTGGTTTCGTGTTCGTACG+CGG | - | chr8_1:52298785-52298804 | Msa1199990:intron | 50.0% |
| !!! | CCTTTCCCCTTTTTTACCGG+CGG | - | chr8_1:52299655-52299674 | Msa1199990:intron | 50.0% |
| GAAAACGTAAAGAGGTGGCC+GGG | + | chr8_1:52299737-52299756 | None:intergenic | 50.0% | |
| GGAAAACGTAAAGAGGTGGC+CGG | + | chr8_1:52299738-52299757 | None:intergenic | 50.0% | |
| TGCTTCCGCCATCGGAAAAA+AGG | + | chr8_1:52299759-52299778 | None:intergenic | 50.0% | |
| !!! | TTTTTCCGATGGCGGAAGCA+AGG | - | chr8_1:52299759-52299778 | Msa1199990:CDS | 50.0% |
| !!! | TTTTCCGATGGCGGAAGCAA+GGG | - | chr8_1:52299760-52299779 | Msa1199990:CDS | 50.0% |
| GTCACCAAACAGTGTACTCC+CGG | - | chr8_1:52299787-52299806 | Msa1199990:CDS | 50.0% | |
| ! | TCATCCGGGAGTACACTGTT+TGG | + | chr8_1:52299794-52299813 | None:intergenic | 50.0% |
| TGAGGTGCGTTTGCAAGTTG+TGG | - | chr8_1:52299864-52299883 | Msa1199990:CDS | 50.0% | |
| CGAGATCGGTTAACGAAACG+AGG | + | chr8_1:52299928-52299947 | None:intergenic | 50.0% | |
| AGAGGAAGTGGAAGAGGAAG+AGG | - | chr8_1:52300036-52300055 | Msa1199990:CDS | 50.0% | |
| AGTGGAAGAGGAAGAGGAAG+AGG | - | chr8_1:52300042-52300061 | Msa1199990:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr8_1:52300048-52300067 | Msa1199990:CDS | 50.0% | |
| AGAAGAGCAGATGAACTCGG+TGG | - | chr8_1:52300198-52300217 | Msa1199990:intron | 50.0% | |
| CGATGAGCAGCAGAAAGAGA+AGG | - | chr8_1:52300717-52300736 | Msa1199990:intron | 50.0% | |
| TTGGCCTCTTGTGAGGTGAA+TGG | - | chr8_1:52301616-52301635 | Msa1199990:intron | 50.0% | |
| ! | CTTTTACTTGGAGGGGTTGG+TGG | - | chr8_1:52301655-52301674 | Msa1199990:intron | 50.0% |
| TGGTGGCCTGCTATTGTCTT+TGG | - | chr8_1:52301672-52301691 | Msa1199990:intron | 50.0% | |
| GGTGGCCTGCTATTGTCTTT+GGG | - | chr8_1:52301673-52301692 | Msa1199990:intron | 50.0% | |
| GTGGCCTGCTATTGTCTTTG+GGG | - | chr8_1:52301674-52301693 | Msa1199990:intron | 50.0% | |
| !! | GTGTTGACTGTGGCATAGCA+GGG | - | chr8_1:52301707-52301726 | Msa1199990:intron | 50.0% |
| TGTGGCATAGCAGGGTTCTT+TGG | - | chr8_1:52301715-52301734 | Msa1199990:intron | 50.0% | |
| ! | TTATAGCCGTGGTGGCTTTG+TGG | - | chr8_1:52301857-52301876 | Msa1199990:intron | 50.0% |
| ACAAACTCAATCCCAGGGAG+TGG | + | chr8_1:52301931-52301950 | None:intergenic | 50.0% | |
| GAGTTTGTGTTCTAGTGGGG+TGG | - | chr8_1:52301943-52301962 | Msa1199990:intron | 50.0% | |
| ATGTGTTCGGCATCAAAGGG+AGG | + | chr8_1:52302160-52302179 | None:intergenic | 50.0% | |
| TGCGCTTGAACCCAGATCGT+GGG | + | chr8_1:52298475-52298494 | None:intergenic | 55.0% | |
| ATGCGCTTGAACCCAGATCG+TGG | + | chr8_1:52298476-52298495 | None:intergenic | 55.0% | |
| GGATCTTGAAACCACGTCGG+CGG | - | chr8_1:52298694-52298713 | Msa1199990:intron | 55.0% | |
| CTGGTTTCGTGTTCGTACGC+GGG | - | chr8_1:52298786-52298805 | Msa1199990:intron | 55.0% | |
| !! | TTGATTAGGGCTGGTCCACC+TGG | - | chr8_1:52298850-52298869 | Msa1199990:intron | 55.0% |
| AGATCGTGGAGAGTGGAGAC+TGG | + | chr8_1:52299561-52299580 | None:intergenic | 55.0% | |
| CCGCCGGTAAAAAAGGGGAA+AGG | + | chr8_1:52299658-52299677 | None:intergenic | 55.0% | |
| AGAGGCCGCCGGTAAAAAAG+GGG | + | chr8_1:52299663-52299682 | None:intergenic | 55.0% | |
| GAGAGGCCGCCGGTAAAAAA+GGG | + | chr8_1:52299664-52299683 | None:intergenic | 55.0% | |
| TGAGAGGCCGCCGGTAAAAA+AGG | + | chr8_1:52299665-52299684 | None:intergenic | 55.0% | |
| !!! | AGTTTTGAGTGAGAGGCCGC+CGG | + | chr8_1:52299674-52299693 | None:intergenic | 55.0% |
| AATGGCAGTTACGGCTGCTG+TGG | + | chr8_1:52299713-52299732 | None:intergenic | 55.0% | |
| ! | CAGCCGTAACTGCCATTTCC+CGG | - | chr8_1:52299716-52299735 | Msa1199990:intron | 55.0% |
| TGGCCGGGAAATGGCAGTTA+CGG | + | chr8_1:52299722-52299741 | None:intergenic | 55.0% | |
| GTAAAGAGGTGGCCGGGAAA+TGG | + | chr8_1:52299731-52299750 | None:intergenic | 55.0% | |
| TGCAAACGCACCTCAACTCC+AGG | + | chr8_1:52299859-52299878 | None:intergenic | 55.0% | |
| GGAAGAGGAAGACGAAGACG+AGG | - | chr8_1:52300087-52300106 | Msa1199990:CDS | 55.0% | |
| GGAAGACGAAGACGAGGAAG+AGG | - | chr8_1:52300093-52300112 | Msa1199990:CDS | 55.0% | |
| CGAAGACGAGGAAGAGGAAG+AGG | - | chr8_1:52300099-52300118 | Msa1199990:CDS | 55.0% | |
| CGAGGAAGAGGAAGAGGAAG+AGG | - | chr8_1:52300105-52300124 | Msa1199990:CDS | 55.0% | |
| !! | GGTGTTGACTGTGGCATAGC+AGG | - | chr8_1:52301706-52301725 | Msa1199990:intron | 55.0% |
| !!! | CTGGTTTTGTTGCTGGGAGC+TGG | - | chr8_1:52301824-52301843 | Msa1199990:intron | 55.0% |
| ! | GACTAGCCACAAAGCCACCA+CGG | + | chr8_1:52301866-52301885 | None:intergenic | 55.0% |
| CGTCAAGTCAGCCTCCACTC+TGG | - | chr8_1:52298573-52298592 | Msa1199990:CDS | 60.0% | |
| TGTCTCGGTCCCTGCGATTG+CGG | - | chr8_1:52298611-52298630 | Msa1199990:intron | 60.0% | |
| AGTTACGGCTGCTGTGGTGG+TGG | + | chr8_1:52299707-52299726 | None:intergenic | 60.0% | |
| ACCACCCTTGCTTCCGCCAT+CGG | + | chr8_1:52299767-52299786 | None:intergenic | 60.0% | |
| GAATGGATCGACCGCCGACG+TGG | + | chr8_1:52298708-52298727 | None:intergenic | 65.0% | |
| !! | TACGGCTGCTGTGGTGGTGG+CGG | + | chr8_1:52299704-52299723 | None:intergenic | 65.0% |
| GGCAGTTACGGCTGCTGTGG+TGG | + | chr8_1:52299710-52299729 | None:intergenic | 65.0% | |
| !! | TCCGATGGCGGAAGCAAGGG+TGG | - | chr8_1:52299763-52299782 | Msa1199990:CDS | 65.0% |
| TTGCTGGGAGCTGGCTGCAG+CGG | - | chr8_1:52301833-52301852 | Msa1199990:intron | 65.0% | |
| !! | GCTGCAGCGGGTTATAGCCG+TGG | - | chr8_1:52301846-52301865 | Msa1199990:intron | 65.0% |
| !! | GCAGCGGGTTATAGCCGTGG+TGG | - | chr8_1:52301849-52301868 | Msa1199990:intron | 65.0% |
| TGCTGGGAGCTGGCTGCAGC+GGG | - | chr8_1:52301834-52301853 | Msa1199990:intron | 70.0% | |
| !! | GGCTGCTGTGGTGGTGGCGG+CGG | + | chr8_1:52299701-52299720 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 52297999 | 52302210 | 52297999 | ID=Msa1199990;Name=Msa1199990 |
| chr8_1 | mRNA | 52297999 | 52302210 | 52297999 | ID=Msa1199990-mRNA-1;Parent=Msa1199990;Name=Msa1199990-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.2|0.33|0.83|0.4|0.66|6|311|253 |
| chr8_1 | exon | 52297999 | 52298432 | 52297999 | ID=Msa1199990-mRNA-1:exon:16727;Parent=Msa1199990-mRNA-1 |
| chr8_1 | exon | 52298468 | 52298611 | 52298468 | ID=Msa1199990-mRNA-1:exon:16726;Parent=Msa1199990-mRNA-1 |
| chr8_1 | exon | 52299471 | 52299529 | 52299471 | ID=Msa1199990-mRNA-1:exon:16725;Parent=Msa1199990-mRNA-1 |
| chr8_1 | exon | 52299737 | 52299959 | 52299737 | ID=Msa1199990-mRNA-1:exon:16724;Parent=Msa1199990-mRNA-1 |
| chr8_1 | exon | 52299993 | 52300201 | 52299993 | ID=Msa1199990-mRNA-1:exon:16723;Parent=Msa1199990-mRNA-1 |
| chr8_1 | exon | 52302207 | 52302210 | 52302207 | ID=Msa1199990-mRNA-1:exon:16722;Parent=Msa1199990-mRNA-1 |
| chr8_1 | CDS | 52302207 | 52302210 | 52302207 | ID=Msa1199990-mRNA-1:cds;Parent=Msa1199990-mRNA-1 |
| chr8_1 | CDS | 52299993 | 52300201 | 52299993 | ID=Msa1199990-mRNA-1:cds;Parent=Msa1199990-mRNA-1 |
| chr8_1 | CDS | 52299737 | 52299959 | 52299737 | ID=Msa1199990-mRNA-1:cds;Parent=Msa1199990-mRNA-1 |
| chr8_1 | CDS | 52299471 | 52299529 | 52299471 | ID=Msa1199990-mRNA-1:cds;Parent=Msa1199990-mRNA-1 |
| chr8_1 | CDS | 52298468 | 52298611 | 52298468 | ID=Msa1199990-mRNA-1:cds;Parent=Msa1199990-mRNA-1 |
| chr8_1 | CDS | 52298310 | 52298432 | 52298310 | ID=Msa1199990-mRNA-1:cds;Parent=Msa1199990-mRNA-1 |
| chr8_1 | three_prime_UTR | 52297999 | 52298309 | 52297999 | ID=Msa1199990-mRNA-1:three_prime_utr;Parent=Msa1199990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
