Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348180 | XP_003625428.1 | 89.120 | 625 | 40 | 2 | 1 | 598 | 1 | 624 | 0.0 | 1014 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348180 | sp|Q9C950|VIP5_ARATH | 62.787 | 567 | 197 | 8 | 39 | 598 | 84 | 643 | 0.0 | 627 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348180 | G7KYI5 | 89.120 | 625 | 40 | 2 | 1 | 598 | 1 | 624 | 0.0 | 1014 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0348180 | 0.811487 | 6.832223e-51 | -8.615850e-47 |
| Msa0010770 | Msa0348180 | 0.805284 | 1.437898e-49 | -8.615850e-47 |
| Msa0014570 | Msa0348180 | 0.803489 | 3.401824e-49 | -8.615850e-47 |
| Msa0022750 | Msa0348180 | -0.811799 | 5.843068e-51 | -8.615850e-47 |
| Msa0048000 | Msa0348180 | 0.813717 | 2.221931e-51 | -8.615850e-47 |
| Msa0055660 | Msa0348180 | 0.812302 | 4.540443e-51 | -8.615850e-47 |
| Msa0068430 | Msa0348180 | 0.814516 | 1.480794e-51 | -8.615850e-47 |
| Msa0074750 | Msa0348180 | 0.819669 | 1.028409e-52 | -8.615850e-47 |
| Msa0077450 | Msa0348180 | 0.802910 | 4.483445e-49 | -8.615850e-47 |
| Msa0096580 | Msa0348180 | 0.804387 | 2.213472e-49 | -8.615850e-47 |
| Msa0133720 | Msa0348180 | 0.808331 | 3.264793e-50 | -8.615850e-47 |
| Msa0133820 | Msa0348180 | 0.811163 | 8.031338e-51 | -8.615850e-47 |
| Msa0138210 | Msa0348180 | 0.817686 | 2.899615e-52 | -8.615850e-47 |
| Msa0142460 | Msa0348180 | 0.807097 | 5.970915e-50 | -8.615850e-47 |
| Msa0143850 | Msa0348180 | 0.807419 | 5.102434e-50 | -8.615850e-47 |
| Msa0183420 | Msa0348180 | 0.818167 | 2.257669e-52 | -8.615850e-47 |
| Msa0236770 | Msa0348180 | 0.828832 | 7.219917e-55 | -8.615850e-47 |
| Msa0260810 | Msa0348180 | 0.809211 | 2.116715e-50 | -8.615850e-47 |
| Msa0271790 | Msa0348180 | 0.803674 | 3.113950e-49 | -8.615850e-47 |
| Msa0277420 | Msa0348180 | 0.806158 | 9.422745e-50 | -8.615850e-47 |
| Msa0304840 | Msa0348180 | 0.801108 | 1.052124e-48 | -8.615850e-47 |
| Msa0318880 | Msa0348180 | 0.809668 | 1.688647e-50 | -8.615850e-47 |
| Msa0347950 | Msa0348180 | 0.821886 | 3.180669e-53 | -8.615850e-47 |
| Msa0347990 | Msa0348180 | 0.823387 | 1.423346e-53 | -8.615850e-47 |
| Msa0348180 | Msa0351380 | 0.809019 | 2.326330e-50 | -8.615850e-47 |
| Msa0348180 | Msa0376020 | 0.812556 | 3.994981e-51 | -8.615850e-47 |
| Msa0348180 | Msa0381000 | 0.804797 | 1.818355e-49 | -8.615850e-47 |
| Msa0348180 | Msa0381080 | 0.804838 | 1.782364e-49 | -8.615850e-47 |
| Msa0348180 | Msa0430870 | 0.805590 | 1.240409e-49 | -8.615850e-47 |
| Msa0348180 | Msa0430950 | 0.804881 | 1.745806e-49 | -8.615850e-47 |
| Msa0348180 | Msa0431770 | 0.818251 | 2.160635e-52 | -8.615850e-47 |
| Msa0348180 | Msa0436370 | 0.805828 | 1.105558e-49 | -8.615850e-47 |
| Msa0348180 | Msa0443430 | 0.834964 | 2.209691e-56 | -8.615850e-47 |
| Msa0348180 | Msa0461590 | 0.803770 | 2.974241e-49 | -8.615850e-47 |
| Msa0348180 | Msa0489100 | 0.805288 | 1.434969e-49 | -8.615850e-47 |
| Msa0348180 | Msa0489660 | 0.834322 | 3.204540e-56 | -8.615850e-47 |
| Msa0348180 | Msa0495220 | 0.859060 | 5.368879e-63 | -8.615850e-47 |
| Msa0348180 | Msa0516020 | 0.814431 | 1.545821e-51 | -8.615850e-47 |
| Msa0348180 | Msa0588120 | 0.824935 | 6.162847e-54 | -8.615850e-47 |
| Msa0348180 | Msa0614510 | 0.800762 | 1.237558e-48 | -8.615850e-47 |
| Msa0348180 | Msa0621650 | 0.825693 | 4.077612e-54 | -8.615850e-47 |
| Msa0348180 | Msa0628500 | 0.824173 | 9.314969e-54 | -8.615850e-47 |
| Msa0348180 | Msa0689760 | 0.802206 | 6.262967e-49 | -8.615850e-47 |
| Msa0348180 | Msa0709160 | 0.800181 | 1.625625e-48 | -8.615850e-47 |
| Msa0348180 | Msa0716860 | 0.816284 | 5.986459e-52 | -8.615850e-47 |
| Msa0348180 | Msa0726080 | 0.801255 | 9.815700e-49 | -8.615850e-47 |
| Msa0348180 | Msa0743530 | 0.820811 | 5.632389e-53 | -8.615850e-47 |
| Msa0348180 | Msa0750250 | 0.816286 | 5.979464e-52 | -8.615850e-47 |
| Msa0348180 | Msa0757800 | 0.812098 | 5.030532e-51 | -8.615850e-47 |
| Msa0348180 | Msa0763890 | 0.800625 | 1.319994e-48 | -8.615850e-47 |
| Msa0348180 | Msa0767100 | 0.807763 | 4.311488e-50 | -8.615850e-47 |
| Msa0348180 | Msa0820200 | 0.815895 | 7.313047e-52 | -8.615850e-47 |
| Msa0348180 | Msa0820890 | 0.810525 | 1.103743e-50 | -8.615850e-47 |
| Msa0348180 | Msa0821800 | 0.809421 | 1.907889e-50 | -8.615850e-47 |
| Msa0348180 | Msa0822170 | 0.813293 | 2.754629e-51 | -8.615850e-47 |
| Msa0348180 | Msa0842770 | 0.808124 | 3.613120e-50 | -8.615850e-47 |
| Msa0348180 | Msa0853950 | 0.805095 | 1.574991e-49 | -8.615850e-47 |
| Msa0348180 | Msa0861830 | 0.800324 | 1.520212e-48 | -8.615850e-47 |
| Msa0348180 | Msa0866400 | 0.824057 | 9.919029e-54 | -8.615850e-47 |
| Msa0348180 | Msa0866410 | 0.816337 | 5.825857e-52 | -8.615850e-47 |
| Msa0348180 | Msa0896240 | 0.810472 | 1.133533e-50 | -8.615850e-47 |
| Msa0348180 | Msa0975940 | 0.809195 | 2.133888e-50 | -8.615850e-47 |
| Msa0348180 | Msa0981310 | 0.800664 | 1.296012e-48 | -8.615850e-47 |
| Msa0348180 | Msa0982240 | 0.821589 | 3.726211e-53 | -8.615850e-47 |
| Msa0348180 | Msa0998590 | 0.802352 | 5.843915e-49 | -8.615850e-47 |
| Msa0348180 | Msa1004420 | 0.823204 | 1.570577e-53 | -8.615850e-47 |
| Msa0348180 | Msa1051600 | 0.815678 | 8.173282e-52 | -8.615850e-47 |
| Msa0348180 | Msa1077070 | 0.831629 | 1.497645e-55 | -8.615850e-47 |
| Msa0348180 | Msa1113590 | 0.806151 | 9.454822e-50 | -8.615850e-47 |
| Msa0348180 | Msa1118040 | 0.800432 | 1.444931e-48 | -8.615850e-47 |
| Msa0348180 | Msa1122780 | 0.833804 | 4.319952e-56 | -8.615850e-47 |
| Msa0348180 | Msa1127430 | 0.810070 | 1.383852e-50 | -8.615850e-47 |
| Msa0348180 | Msa1158660 | 0.813147 | 2.965748e-51 | -8.615850e-47 |
| Msa0348180 | Msa1168550 | 0.811172 | 7.996554e-51 | -8.615850e-47 |
| Msa0348180 | Msa1168590 | 0.816295 | 5.951618e-52 | -8.615850e-47 |
| Msa0348180 | Msa1169720 | 0.845089 | 5.046825e-59 | -8.615850e-47 |
| Msa0348180 | Msa1170800 | 0.802857 | 4.597686e-49 | -8.615850e-47 |
| Msa0348180 | Msa1174850 | 0.829632 | 4.618421e-55 | -8.615850e-47 |
| Msa0348180 | Msa1188560 | 0.801621 | 8.257214e-49 | -8.615850e-47 |
| Msa0348180 | Msa1188710 | 0.815790 | 7.716369e-52 | -8.615850e-47 |
| Msa0348180 | Msa1205590 | 0.804438 | 2.160602e-49 | -8.615850e-47 |
| Msa0348180 | Msa1211340 | 0.800150 | 1.649188e-48 | -8.615850e-47 |
| Msa0348180 | Msa1286550 | 0.812911 | 3.340227e-51 | -8.615850e-47 |
| Msa0348180 | Msa1297530 | 0.812585 | 3.937137e-51 | -8.615850e-47 |
| Msa0348180 | Msa1299330 | 0.807613 | 4.641070e-50 | -8.615850e-47 |
| Msa0348180 | Msa1323690 | 0.800969 | 1.123016e-48 | -8.615850e-47 |
| Msa0348180 | Msa1363450 | 0.806438 | 8.227443e-50 | -8.615850e-47 |
| Msa0348180 | Msa1363590 | 0.814424 | 1.551247e-51 | -8.615850e-47 |
| Msa0348180 | Msa1366300 | 0.812712 | 3.692769e-51 | -8.615850e-47 |
| Msa0348180 | Msa1372290 | 0.803130 | 4.036870e-49 | -8.615850e-47 |
| Msa0348180 | Msa1379850 | 0.807883 | 4.065155e-50 | -8.615850e-47 |
| Msa0348180 | Msa1393800 | 0.805028 | 1.626455e-49 | -8.615850e-47 |
| Msa0348180 | Msa1396940 | 0.818652 | 1.752649e-52 | -8.615850e-47 |
| Msa0348180 | Msa1404540 | 0.810871 | 9.292165e-51 | -8.615850e-47 |
| Msa0348180 | Msa1420250 | 0.803564 | 3.283254e-49 | -8.615850e-47 |
| Msa0348180 | Msa1426910 | 0.808333 | 3.260842e-50 | -8.615850e-47 |
| Msa0348180 | Msa1431060 | 0.819430 | 1.166180e-52 | -8.615850e-47 |
| Msa0348180 | Msa1433220 | 0.817169 | 3.789918e-52 | -8.615850e-47 |
| Msa0348180 | Msa1447150 | 0.828900 | 6.951371e-55 | -8.615850e-47 |
| Msa0348180 | Msa1448490 | 0.811376 | 7.221587e-51 | -8.615850e-47 |
| Msa0348180 | Msa1458030 | 0.801890 | 7.273989e-49 | -8.615850e-47 |
| Msa0348180 | Msa1459180 | 0.800165 | 1.638229e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348180 | MtrunA17_Chr7g0262441 | 89.120 | 625 | 40 | 2 | 1 | 598 | 1 | 624 | 0.0 | 1014 |
| Msa0348180 | MtrunA17_Chr4g0047731 | 63.623 | 657 | 178 | 8 | 1 | 598 | 1 | 655 | 0.0 | 770 |
| Msa0348180 | MtrunA17_Chr4g0014481 | 48.792 | 662 | 260 | 9 | 1 | 598 | 1 | 647 | 0.0 | 543 |
| Msa0348180 | MtrunA17_Chr4g0014471 | 60.000 | 40 | 16 | 0 | 559 | 598 | 3 | 42 | 1.33e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348180 | AT1G61040.3 | 62.787 | 567 | 197 | 8 | 39 | 598 | 84 | 643 | 0.0 | 627 |
| Msa0348180 | AT1G61040.2 | 62.787 | 567 | 197 | 8 | 39 | 598 | 84 | 643 | 0.0 | 627 |
| Msa0348180 | AT1G61040.1 | 62.787 | 567 | 197 | 8 | 39 | 598 | 84 | 643 | 0.0 | 627 |
Find 154 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACTTACAAAATGGTTTA+TGG | 0.170699 | 3_1:-10036524 | Msa0348180:CDS |
| CGTCCTTCTCCCGAGATTTC+CGG | 0.188455 | 3_1:+10035978 | None:intergenic |
| GGGAGTTCAGGCAGGGTTTA+TGG | 0.216936 | 3_1:-10035555 | Msa0348180:CDS |
| AAAGAGGGGTCTAAAATTTC+AGG | 0.225292 | 3_1:-10036748 | Msa0348180:CDS |
| TGGCTTGAGCTACTGAAATT+AGG | 0.237330 | 3_1:+10036697 | None:intergenic |
| GCTTTCAATGCTTTATTAAC+TGG | 0.248153 | 3_1:+10035881 | None:intergenic |
| TGCCACATTGCTAGCGATAT+TGG | 0.272264 | 3_1:+10035596 | None:intergenic |
| CAAGGTCAAAACTTACAAAA+TGG | 0.282281 | 3_1:-10036531 | Msa0348180:CDS |
| CAGAGAATTGAAGAAGTTGT+TGG | 0.303542 | 3_1:-10035524 | Msa0348180:CDS |
| TTCTCAGCTGCAACATTTAG+TGG | 0.306966 | 3_1:+10036097 | None:intergenic |
| GTCCTTCTCCCGAGATTTCC+GGG | 0.324137 | 3_1:+10035979 | None:intergenic |
| TGGTGGAGCGCAGGGAGTTC+AGG | 0.326248 | 3_1:-10035567 | Msa0348180:CDS |
| GACGGCCACTGCCGAGGCTT+TGG | 0.334682 | 3_1:-10035708 | Msa0348180:CDS |
| TGATTGTTGGTTGTTTCGTT+AGG | 0.335264 | 3_1:-10036483 | Msa0348180:CDS |
| GAGGCTTTGGAAGCTGCTGC+TGG | 0.336521 | 3_1:-10035695 | Msa0348180:CDS |
| TTGGAAGCTGCTGCTGGTGC+TGG | 0.337203 | 3_1:-10035689 | Msa0348180:CDS |
| CTAGTCCATCTCCTTGAAAA+AGG | 0.345767 | 3_1:+10035839 | None:intergenic |
| TCTAATTTATAGAGTCGATT+AGG | 0.352085 | 3_1:+10036388 | None:intergenic |
| TGATTTAGAAAATGACCTTT+TGG | 0.354336 | 3_1:-10037208 | Msa0348180:CDS |
| GTCACGCTTGGATGCTATCT+TGG | 0.378668 | 3_1:+10036933 | None:intergenic |
| TTCAGCTCGCGATGTGCTTC+CGG | 0.380178 | 3_1:+10036769 | None:intergenic |
| TACATTTCCCTTGTCACGCT+TGG | 0.383575 | 3_1:+10036921 | None:intergenic |
| GACTCTGTTCCTTCATCCAC+TGG | 0.384610 | 3_1:+10035644 | None:intergenic |
| CCAGACAAAACTGCAAGAAT+TGG | 0.386133 | 3_1:-10036008 | Msa0348180:CDS |
| GCAGCTGGAAATTATACTTC+TGG | 0.386672 | 3_1:-10035776 | Msa0348180:CDS |
| CTGAGATGAACAGAAAGAAC+AGG | 0.394551 | 3_1:-10035937 | Msa0348180:CDS |
| ACCTACTTTCACTTTCACTA+TGG | 0.405201 | 3_1:+10036677 | None:intergenic |
| GGAGCGCAGGGAGTTCAGGC+AGG | 0.411409 | 3_1:-10035563 | Msa0348180:CDS |
| TCTGGTGGTGCAGTGGGTGA+TGG | 0.416049 | 3_1:-10035758 | Msa0348180:CDS |
| ACAAGTACTTGAATGTTGTC+TGG | 0.416298 | 3_1:-10036351 | Msa0348180:CDS |
| TGTTTCGTTAGGGTTGGTAT+TGG | 0.420135 | 3_1:-10036472 | Msa0348180:CDS |
| CTCTGCTGCGAGGTGGCAAA+TGG | 0.421789 | 3_1:-10036317 | Msa0348180:CDS |
| GGACCGGTTGAAAAGGGAAT+TGG | 0.431061 | 3_1:-10036074 | Msa0348180:CDS |
| GGGTCTAAAATTTCAGGATC+AGG | 0.435083 | 3_1:-10036742 | Msa0348180:CDS |
| CCAGCTGCAGCCTCTTCAGC+CGG | 0.436278 | 3_1:+10035791 | None:intergenic |
| CTGAGAAGGACCGGTTGAAA+AGG | 0.436446 | 3_1:-10036081 | Msa0348180:CDS |
| GTCTGATAGGGCTGCTAAGA+AGG | 0.438794 | 3_1:-10036974 | Msa0348180:CDS |
| GGAGTTTAAACAGTGGGTTA+AGG | 0.439170 | 3_1:-10036263 | Msa0348180:CDS |
| CTAGCAATGTGGCAAAAGTT+TGG | 0.440126 | 3_1:-10035587 | Msa0348180:CDS |
| GTTGGTTGTTTCGTTAGGGT+TGG | 0.442169 | 3_1:-10036478 | Msa0348180:CDS |
| TCGTTAGGGTTGGTATTGGC+AGG | 0.445479 | 3_1:-10036468 | Msa0348180:CDS |
| GCATTGAAAGCAGGGGAGGC+AGG | 0.447530 | 3_1:-10035869 | Msa0348180:CDS |
| AAATTAGGTTTCCCTATTTG+CGG | 0.450487 | 3_1:+10036712 | None:intergenic |
| GTTAATAAAGCATTGAAAGC+AGG | 0.455533 | 3_1:-10035878 | Msa0348180:CDS |
| TGGAGGAATCCCGGAAATCT+CGG | 0.458345 | 3_1:-10035988 | Msa0348180:CDS |
| CAAAGACTGGGCCTATCTAC+AGG | 0.458836 | 3_1:-10036444 | Msa0348180:CDS |
| CCGGCTGAAGAGGCTGCAGC+TGG | 0.464826 | 3_1:-10035791 | Msa0348180:CDS |
| TTCTGACAGGTCAGCTGCTA+AGG | 0.465616 | 3_1:-10036839 | Msa0348180:CDS |
| CTCAGAAAGCCTCAGAGCCT+TGG | 0.470974 | 3_1:+10035955 | None:intergenic |
| GATGGAGGCAGCAATGGGAT+TGG | 0.471168 | 3_1:-10035740 | Msa0348180:CDS |
| GAACTACTATAATTCAAAAC+CGG | 0.473536 | 3_1:-10035810 | Msa0348180:CDS |
| ATTTGAAAAGCCATCGTTTG+AGG | 0.474055 | 3_1:-10036575 | Msa0348180:CDS |
| GCAAAAGTTTGGTGGAGCGC+AGG | 0.478459 | 3_1:-10035576 | Msa0348180:CDS |
| GATTGTTGGTTGTTTCGTTA+GGG | 0.478505 | 3_1:-10036482 | Msa0348180:CDS |
| GCCTATCTACAGGCTCTGTA+TGG | 0.481256 | 3_1:-10036434 | Msa0348180:CDS |
| AGCAGCAGCTTCCAAAGCCT+CGG | 0.484282 | 3_1:+10035697 | None:intergenic |
| GGTATTGGCAGGTCAAAGAC+TGG | 0.484693 | 3_1:-10036457 | Msa0348180:CDS |
| CAAGGAGATGGACTAGATCA+AGG | 0.488397 | 3_1:-10035832 | Msa0348180:CDS |
| ATCAGAGTCATCATCGTCTC+CGG | 0.491148 | 3_1:+10037125 | None:intergenic |
| GAAAGCAAGAACGATGCAAC+CGG | 0.495266 | 3_1:-10036043 | Msa0348180:CDS |
| GTTCTGACCGTGAGGTGGAC+AGG | 0.495463 | 3_1:-10037092 | Msa0348180:CDS |
| CAAGTACTTGAATGTTGTCT+GGG | 0.495702 | 3_1:-10036350 | Msa0348180:CDS |
| CGAGAAGACGGAAGAGGAGG+CGG | 0.500413 | 3_1:+10036883 | None:intergenic |
| AACATTCAAGTACTTGTATG+TGG | 0.501552 | 3_1:+10036357 | None:intergenic |
| GTTTAAACTCCTCCTCAAGC+GGG | 0.503277 | 3_1:+10036275 | None:intergenic |
| ACCATACAGAGCCTGTAGAT+AGG | 0.505421 | 3_1:+10036433 | None:intergenic |
| TGCAAGAATTGGAGGAATCC+CGG | 0.506961 | 3_1:-10035997 | Msa0348180:CDS |
| GTGGGTGATGGAGGCAGCAA+TGG | 0.511883 | 3_1:-10035746 | Msa0348180:CDS |
| AGCTTCCAAAGCCTCGGCAG+TGG | 0.512251 | 3_1:+10035703 | None:intergenic |
| TGCTGCTGGTGCTGGAAAGT+TGG | 0.516833 | 3_1:-10035681 | Msa0348180:CDS |
| CTTCAACATCCTCGTCACTA+CGG | 0.517935 | 3_1:+10036653 | None:intergenic |
| GAAGCTTTGTCTGAAAATGA+AGG | 0.519185 | 3_1:-10036634 | Msa0348180:CDS |
| CGATGATCTTTACAAGGATG+AGG | 0.522524 | 3_1:-10037049 | Msa0348180:CDS |
| GACAAAACTGCAAGAATTGG+AGG | 0.524371 | 3_1:-10036005 | Msa0348180:CDS |
| TTCAACATCCTCGTCACTAC+GGG | 0.525338 | 3_1:+10036654 | None:intergenic |
| TGAGAAGGACCGGTTGAAAA+GGG | 0.526022 | 3_1:-10036080 | Msa0348180:CDS |
| GGAGGAATCCCGGAAATCTC+GGG | 0.526557 | 3_1:-10035987 | Msa0348180:CDS |
| TTAATAAAGCATTGAAAGCA+GGG | 0.529926 | 3_1:-10035877 | Msa0348180:CDS |
| GGCAGCAATGGGATTGGAGC+TGG | 0.532641 | 3_1:-10035734 | Msa0348180:CDS |
| GGTGGTGCAGTGGGTGATGG+AGG | 0.533573 | 3_1:-10035755 | Msa0348180:CDS |
| TGGGTGATGGAGGCAGCAAT+GGG | 0.535163 | 3_1:-10035745 | Msa0348180:CDS |
| AAGCTTTGTCTGAAAATGAA+GGG | 0.535182 | 3_1:-10036633 | Msa0348180:CDS |
| TAATTCAAAACCGGCTGAAG+AGG | 0.535280 | 3_1:-10035801 | Msa0348180:CDS |
| ATGTTGCAGCTGAGAAGGAC+CGG | 0.542009 | 3_1:-10036090 | Msa0348180:CDS |
| ACTAAATGTTGCAGCTGAGA+AGG | 0.543890 | 3_1:-10036095 | Msa0348180:CDS |
| TGAGGAGGAGTTTAAACAGT+GGG | 0.546108 | 3_1:-10036269 | Msa0348180:CDS |
| TGAATGAACTGCGTGCTAAG+AGG | 0.547152 | 3_1:-10036807 | Msa0348180:CDS |
| AGCACATCGCGAGCTGAAAG+AGG | 0.547212 | 3_1:-10036764 | Msa0348180:CDS |
| GAGCGCAGGGAGTTCAGGCA+GGG | 0.549229 | 3_1:-10035562 | Msa0348180:CDS |
| ATCCCGGAAATCTCGGGAGA+AGG | 0.549427 | 3_1:-10035981 | Msa0348180:CDS |
| TGTCTGGATCTTCTCTACTC+CGG | 0.552600 | 3_1:+10036024 | None:intergenic |
| GAGGCTGAAACAGCGAGAGC+CGG | 0.553800 | 3_1:-10036788 | Msa0348180:CDS |
| TTATACCAGCAGCCTCCAAA+AGG | 0.555238 | 3_1:+10037193 | None:intergenic |
| TGGTATGACGGCCACTGCCG+AGG | 0.559819 | 3_1:-10035714 | Msa0348180:CDS |
| AAGTAGAGCGAAGTGGTGGC+CGG | 0.562543 | 3_1:-10036240 | Msa0348180:CDS |
| GGTGATTACAAGAGAAGAAG+AGG | 0.564356 | 3_1:-10035449 | Msa0348180:CDS |
| CATCTAGCCTCTTCAGCATC+CGG | 0.564400 | 3_1:+10036221 | None:intergenic |
| CATTTGCCACCTCGCAGCAG+AGG | 0.570644 | 3_1:+10036318 | None:intergenic |
| ACAAGAGCTCCAGTGGATGA+AGG | 0.572277 | 3_1:-10035653 | Msa0348180:CDS |
| GTGGTGGCCGGATGCTGAAG+AGG | 0.573366 | 3_1:-10036228 | Msa0348180:CDS |
| GACAGGTCAGCTGCTAAGGA+TGG | 0.574292 | 3_1:-10036835 | Msa0348180:CDS |
| CAAAAGTTTGGTGGAGCGCA+GGG | 0.575970 | 3_1:-10035575 | Msa0348180:CDS |
| GATGATGACAAGATAATGCC+TGG | 0.576356 | 3_1:-10036598 | Msa0348180:CDS |
| GATAGCATCCAAGCGTGACA+AGG | 0.578775 | 3_1:-10036929 | Msa0348180:CDS |
| GCAATGTGGCAAAAGTTTGG+TGG | 0.581264 | 3_1:-10035584 | Msa0348180:CDS |
| ATCACACGAGAAGACGGAAG+AGG | 0.585226 | 3_1:+10036877 | None:intergenic |
| GCCATAGTGAAAGTGAAAGT+AGG | 0.587909 | 3_1:-10036678 | Msa0348180:CDS |
| GCACATCGCGAGCTGAAAGA+GGG | 0.588648 | 3_1:-10036763 | Msa0348180:CDS |
| TGTTTAAACTCCTCCTCAAG+CGG | 0.589955 | 3_1:+10036274 | None:intergenic |
| ATCTCGGGAGAAGGACGCCA+AGG | 0.590489 | 3_1:-10035972 | Msa0348180:CDS |
| GGTCTAAAATTTCAGGATCA+GGG | 0.591143 | 3_1:-10036741 | Msa0348180:CDS |
| TATACTTCTGGTGGTGCAGT+GGG | 0.597159 | 3_1:-10035764 | Msa0348180:CDS |
| TAAAAGAAATCACCATTCCA+AGG | 0.599048 | 3_1:-10036549 | Msa0348180:CDS |
| TGCGAGGTGGCAAATGGCCA+TGG | 0.599400 | 3_1:-10036311 | Msa0348180:CDS |
| AGGAGTGATGAATCTGATGT+TGG | 0.600216 | 3_1:-10037072 | Msa0348180:CDS |
| CATCTACTAGATCTTCTGAC+AGG | 0.600420 | 3_1:-10036852 | Msa0348180:CDS |
| TGTTGGCGATGATCTTTACA+AGG | 0.605036 | 3_1:-10037055 | Msa0348180:CDS |
| TGGGATTGGAGCTGGTATGA+CGG | 0.607971 | 3_1:-10035726 | Msa0348180:CDS |
| GATGACATCACACGAGAAGA+CGG | 0.608285 | 3_1:+10036871 | None:intergenic |
| TTTAAACTCCTCCTCAAGCG+GGG | 0.608619 | 3_1:+10036276 | None:intergenic |
| GTCTAAAATTTCAGGATCAG+GGG | 0.613225 | 3_1:-10036740 | Msa0348180:CDS |
| GAGTCCCAGAAAACGATGGA+AGG | 0.614728 | 3_1:-10035496 | Msa0348180:CDS |
| ACACGAGAAGACGGAAGAGG+AGG | 0.615894 | 3_1:+10036880 | None:intergenic |
| GGTAGACACAAGAGCTCCAG+TGG | 0.616107 | 3_1:-10035660 | Msa0348180:CDS |
| TTATACTTCTGGTGGTGCAG+TGG | 0.617548 | 3_1:-10035765 | Msa0348180:CDS |
| AGAAGGACGCCAAGGCTCTG+AGG | 0.617944 | 3_1:-10035964 | Msa0348180:CDS |
| ATAGCATCCAAGCGTGACAA+GGG | 0.619336 | 3_1:-10036928 | Msa0348180:CDS |
| GCTGAAGAGGCTAGATGTGG+TGG | 0.622446 | 3_1:-10036215 | Msa0348180:CDS |
| TCTAAAATTTCAGGATCAGG+GGG | 0.625310 | 3_1:-10036739 | Msa0348180:CDS |
| TAAAGCATTGAAAGCAGGGG+AGG | 0.625312 | 3_1:-10035873 | Msa0348180:CDS |
| CATCACTCCTGTCCACCTCA+CGG | 0.632979 | 3_1:+10037085 | None:intergenic |
| GTATTGGCAGGTCAAAGACT+GGG | 0.637870 | 3_1:-10036456 | Msa0348180:CDS |
| CATCAGCTGACATTAACAGT+TGG | 0.642633 | 3_1:-10035470 | Msa0348180:CDS |
| GATGATGACTCTGATGATGA+TGG | 0.644756 | 3_1:-10037117 | Msa0348180:CDS |
| CACATCGCGAGCTGAAAGAG+GGG | 0.647083 | 3_1:-10036762 | Msa0348180:CDS |
| ATGAGACCTCTGCTGCGAGG+TGG | 0.647938 | 3_1:-10036324 | Msa0348180:CDS |
| GCTGGAAATTATACTTCTGG+TGG | 0.650386 | 3_1:-10035773 | Msa0348180:CDS |
| AAGTAGGTCCCGTAGTGACG+AGG | 0.658216 | 3_1:-10036662 | Msa0348180:CDS |
| TAATAAAGCATTGAAAGCAG+GGG | 0.659215 | 3_1:-10035876 | Msa0348180:CDS |
| GTGATTACAAGAGAAGAAGA+GGG | 0.663120 | 3_1:-10035448 | Msa0348180:CDS |
| AAGGAAGTAGAGCGAAGTGG+TGG | 0.663190 | 3_1:-10036244 | Msa0348180:CDS |
| ATAGAGTCGATTAGGATCCG+AGG | 0.669932 | 3_1:+10036396 | None:intergenic |
| TTAAACTCCTCCTCAAGCGG+GGG | 0.674132 | 3_1:+10036277 | None:intergenic |
| GTTAAGGAAGTAGAGCGAAG+TGG | 0.674298 | 3_1:-10036247 | Msa0348180:CDS |
| TTCTAACATCTGCTTCACAG+TGG | 0.675939 | 3_1:+10036144 | None:intergenic |
| TGGTGGTTCTGACCGTGAGG+TGG | 0.679830 | 3_1:-10037097 | Msa0348180:CDS |
| TTTCGAGTCCCAGAAAACGA+TGG | 0.687907 | 3_1:-10035500 | Msa0348180:CDS |
| AAGTACTTGAATGTTGTCTG+GGG | 0.689030 | 3_1:-10036349 | Msa0348180:CDS |
| TTGAGGAGGAGTTTAAACAG+TGG | 0.689149 | 3_1:-10036270 | Msa0348180:CDS |
| TGCCAATATCGCTAGCAATG+TGG | 0.691084 | 3_1:-10035598 | Msa0348180:CDS |
| GATGACTCTGATGATGATGG+TGG | 0.712456 | 3_1:-10037114 | Msa0348180:CDS |
| GATGCTGAAGAGGCTAGATG+TGG | 0.716515 | 3_1:-10036218 | Msa0348180:CDS |
| GAAATGAGACCTCTGCTGCG+AGG | 0.717415 | 3_1:-10036327 | Msa0348180:CDS |
| TGATGGTGGTTCTGACCGTG+AGG | 0.756865 | 3_1:-10037100 | Msa0348180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTGATTTTTTGATGA+AGG | + | chr3_1:10035502-10035521 | None:intergenic | 15.0% |
| !!! | AAAAATCAATTTTTTGATTC+CGG | - | chr3_1:10035508-10035527 | Msa0348180:CDS | 15.0% |
| !!! | AAAAATTGATTTTTTGATGA+AGG | + | chr3_1:10035502-10035521 | None:intergenic | 15.0% |
| !!! | AAAAATCAATTTTTTGATTC+CGG | - | chr3_1:10035508-10035527 | Msa0348180:CDS | 15.0% |
| !! | AAAACTTACAAAATGGTTTA+TGG | - | chr3_1:10036128-10036147 | Msa0348180:CDS | 20.0% |
| !! | AAAACTTACAAAATGGTTTA+TGG | - | chr3_1:10036128-10036147 | Msa0348180:CDS | 20.0% |
| !! | TGATTTAGAAAATGACCTTT+TGG | - | chr3_1:10035444-10035463 | Msa0348180:CDS | 25.0% |
| !!! | ATTGATTTTTTGATGAAGGT+GGG | + | chr3_1:10035498-10035517 | None:intergenic | 25.0% |
| !!! | AATTGATTTTTTGATGAAGG+TGG | + | chr3_1:10035499-10035518 | None:intergenic | 25.0% |
| ! | TCTAATTTATAGAGTCGATT+AGG | + | chr3_1:10036267-10036286 | None:intergenic | 25.0% |
| !!! | TTAATAAAGCATTGAAAGCA+GGG | - | chr3_1:10036775-10036794 | Msa0348180:CDS | 25.0% |
| ! | GAACTACTATAATTCAAAAC+CGG | - | chr3_1:10036842-10036861 | Msa0348180:CDS | 25.0% |
| !! | TGATTTAGAAAATGACCTTT+TGG | - | chr3_1:10035444-10035463 | Msa0348180:CDS | 25.0% |
| !!! | ATTGATTTTTTGATGAAGGT+GGG | + | chr3_1:10035498-10035517 | None:intergenic | 25.0% |
| !!! | AATTGATTTTTTGATGAAGG+TGG | + | chr3_1:10035499-10035518 | None:intergenic | 25.0% |
| ! | TCTAATTTATAGAGTCGATT+AGG | + | chr3_1:10036267-10036286 | None:intergenic | 25.0% |
| !!! | TTAATAAAGCATTGAAAGCA+GGG | - | chr3_1:10036775-10036794 | Msa0348180:CDS | 25.0% |
| ! | GAACTACTATAATTCAAAAC+CGG | - | chr3_1:10036842-10036861 | Msa0348180:CDS | 25.0% |
| ! | TTTAGAAAATGACCTTTTGG+AGG | - | chr3_1:10035447-10035466 | Msa0348180:CDS | 30.0% |
| ! | AGAGATGATTTTGTCTGATA+GGG | - | chr3_1:10035666-10035685 | Msa0348180:CDS | 30.0% |
| AAATTAGGTTTCCCTATTTG+CGG | + | chr3_1:10035943-10035962 | None:intergenic | 30.0% | |
| ! | AAGCTTTGTCTGAAAATGAA+GGG | - | chr3_1:10036019-10036038 | Msa0348180:CDS | 30.0% |
| TAAAAGAAATCACCATTCCA+AGG | - | chr3_1:10036103-10036122 | Msa0348180:CDS | 30.0% | |
| !! | CATTTTGTAAGTTTTGACCT+TGG | + | chr3_1:10036123-10036142 | None:intergenic | 30.0% |
| CAAGGTCAAAACTTACAAAA+TGG | - | chr3_1:10036121-10036140 | Msa0348180:CDS | 30.0% | |
| ACAATCAACTCCTCAAAAAA+GGG | + | chr3_1:10036156-10036175 | None:intergenic | 30.0% | |
| AACAATCAACTCCTCAAAAA+AGG | + | chr3_1:10036157-10036176 | None:intergenic | 30.0% | |
| !!! | TTTTTTGAGGAGTTGATTGT+TGG | - | chr3_1:10036156-10036175 | Msa0348180:CDS | 30.0% |
| AACATTCAAGTACTTGTATG+TGG | + | chr3_1:10036298-10036317 | None:intergenic | 30.0% | |
| AAGAGAAAAAATCTATCTCG+CGG | - | chr3_1:10036529-10036548 | Msa0348180:CDS | 30.0% | |
| ! | GCTTTCAATGCTTTATTAAC+TGG | + | chr3_1:10036774-10036793 | None:intergenic | 30.0% |
| !! | GTTAATAAAGCATTGAAAGC+AGG | - | chr3_1:10036774-10036793 | Msa0348180:CDS | 30.0% |
| !! | TAATAAAGCATTGAAAGCAG+GGG | - | chr3_1:10036776-10036795 | Msa0348180:CDS | 30.0% |
| ! | TTTAGAAAATGACCTTTTGG+AGG | - | chr3_1:10035447-10035466 | Msa0348180:CDS | 30.0% |
| ! | AGAGATGATTTTGTCTGATA+GGG | - | chr3_1:10035666-10035685 | Msa0348180:CDS | 30.0% |
| AAATTAGGTTTCCCTATTTG+CGG | + | chr3_1:10035943-10035962 | None:intergenic | 30.0% | |
| ! | AAGCTTTGTCTGAAAATGAA+GGG | - | chr3_1:10036019-10036038 | Msa0348180:CDS | 30.0% |
| TAAAAGAAATCACCATTCCA+AGG | - | chr3_1:10036103-10036122 | Msa0348180:CDS | 30.0% | |
| !! | CATTTTGTAAGTTTTGACCT+TGG | + | chr3_1:10036123-10036142 | None:intergenic | 30.0% |
| CAAGGTCAAAACTTACAAAA+TGG | - | chr3_1:10036121-10036140 | Msa0348180:CDS | 30.0% | |
| ACAATCAACTCCTCAAAAAA+GGG | + | chr3_1:10036156-10036175 | None:intergenic | 30.0% | |
| AACAATCAACTCCTCAAAAA+AGG | + | chr3_1:10036157-10036176 | None:intergenic | 30.0% | |
| !!! | TTTTTTGAGGAGTTGATTGT+TGG | - | chr3_1:10036156-10036175 | Msa0348180:CDS | 30.0% |
| AACATTCAAGTACTTGTATG+TGG | + | chr3_1:10036298-10036317 | None:intergenic | 30.0% | |
| AAGAGAAAAAATCTATCTCG+CGG | - | chr3_1:10036529-10036548 | Msa0348180:CDS | 30.0% | |
| ! | GCTTTCAATGCTTTATTAAC+TGG | + | chr3_1:10036774-10036793 | None:intergenic | 30.0% |
| !! | GTTAATAAAGCATTGAAAGC+AGG | - | chr3_1:10036774-10036793 | Msa0348180:CDS | 30.0% |
| !! | TAATAAAGCATTGAAAGCAG+GGG | - | chr3_1:10036776-10036795 | Msa0348180:CDS | 30.0% |
| ! | GAGAGATGATTTTGTCTGAT+AGG | - | chr3_1:10035665-10035684 | Msa0348180:CDS | 35.0% |
| ! | AAAGAGGGGTCTAAAATTTC+AGG | - | chr3_1:10035904-10035923 | Msa0348180:CDS | 35.0% |
| ! | GGTCTAAAATTTCAGGATCA+GGG | - | chr3_1:10035911-10035930 | Msa0348180:CDS | 35.0% |
| ! | GTCTAAAATTTCAGGATCAG+GGG | - | chr3_1:10035912-10035931 | Msa0348180:CDS | 35.0% |
| ! | TCTAAAATTTCAGGATCAGG+GGG | - | chr3_1:10035913-10035932 | Msa0348180:CDS | 35.0% |
| ACCTACTTTCACTTTCACTA+TGG | + | chr3_1:10035978-10035997 | None:intergenic | 35.0% | |
| ! | GAAGCTTTGTCTGAAAATGA+AGG | - | chr3_1:10036018-10036037 | Msa0348180:CDS | 35.0% |
| ATTTGAAAAGCCATCGTTTG+AGG | - | chr3_1:10036077-10036096 | Msa0348180:CDS | 35.0% | |
| ! | TCTTTTATGTCCTCAAACGA+TGG | + | chr3_1:10036090-10036109 | None:intergenic | 35.0% |
| !! | TGTAAGTTTTGACCTTGGAA+TGG | + | chr3_1:10036118-10036137 | None:intergenic | 35.0% |
| ! | TGATTGTTGGTTGTTTCGTT+AGG | - | chr3_1:10036169-10036188 | Msa0348180:CDS | 35.0% |
| ! | GATTGTTGGTTGTTTCGTTA+GGG | - | chr3_1:10036170-10036189 | Msa0348180:CDS | 35.0% |
| ACAAGTACTTGAATGTTGTC+TGG | - | chr3_1:10036301-10036320 | Msa0348180:CDS | 35.0% | |
| CAAGTACTTGAATGTTGTCT+GGG | - | chr3_1:10036302-10036321 | Msa0348180:CDS | 35.0% | |
| AAGTACTTGAATGTTGTCTG+GGG | - | chr3_1:10036303-10036322 | Msa0348180:CDS | 35.0% | |
| ! | TTTCCAATTCCCTTTTCAAC+CGG | + | chr3_1:10036584-10036603 | None:intergenic | 35.0% |
| !! | CAGGTTATGATCCTTTTTCA+AGG | - | chr3_1:10036802-10036821 | Msa0348180:CDS | 35.0% |
| !!! | ATGATCCTTTTTCAAGGAGA+TGG | - | chr3_1:10036808-10036827 | Msa0348180:CDS | 35.0% |
| CAGAGAATTGAAGAAGTTGT+TGG | - | chr3_1:10037128-10037147 | Msa0348180:CDS | 35.0% | |
| GTGATTACAAGAGAAGAAGA+GGG | - | chr3_1:10037204-10037223 | Msa0348180:CDS | 35.0% | |
| ! | GAGAGATGATTTTGTCTGAT+AGG | - | chr3_1:10035665-10035684 | Msa0348180:CDS | 35.0% |
| ! | AAAGAGGGGTCTAAAATTTC+AGG | - | chr3_1:10035904-10035923 | Msa0348180:CDS | 35.0% |
| ! | GGTCTAAAATTTCAGGATCA+GGG | - | chr3_1:10035911-10035930 | Msa0348180:CDS | 35.0% |
| ! | GTCTAAAATTTCAGGATCAG+GGG | - | chr3_1:10035912-10035931 | Msa0348180:CDS | 35.0% |
| ! | TCTAAAATTTCAGGATCAGG+GGG | - | chr3_1:10035913-10035932 | Msa0348180:CDS | 35.0% |
| ACCTACTTTCACTTTCACTA+TGG | + | chr3_1:10035978-10035997 | None:intergenic | 35.0% | |
| ! | GAAGCTTTGTCTGAAAATGA+AGG | - | chr3_1:10036018-10036037 | Msa0348180:CDS | 35.0% |
| ATTTGAAAAGCCATCGTTTG+AGG | - | chr3_1:10036077-10036096 | Msa0348180:CDS | 35.0% | |
| ! | TCTTTTATGTCCTCAAACGA+TGG | + | chr3_1:10036090-10036109 | None:intergenic | 35.0% |
| !! | TGTAAGTTTTGACCTTGGAA+TGG | + | chr3_1:10036118-10036137 | None:intergenic | 35.0% |
| ! | TGATTGTTGGTTGTTTCGTT+AGG | - | chr3_1:10036169-10036188 | Msa0348180:CDS | 35.0% |
| ! | GATTGTTGGTTGTTTCGTTA+GGG | - | chr3_1:10036170-10036189 | Msa0348180:CDS | 35.0% |
| ACAAGTACTTGAATGTTGTC+TGG | - | chr3_1:10036301-10036320 | Msa0348180:CDS | 35.0% | |
| CAAGTACTTGAATGTTGTCT+GGG | - | chr3_1:10036302-10036321 | Msa0348180:CDS | 35.0% | |
| AAGTACTTGAATGTTGTCTG+GGG | - | chr3_1:10036303-10036322 | Msa0348180:CDS | 35.0% | |
| ! | TTTCCAATTCCCTTTTCAAC+CGG | + | chr3_1:10036584-10036603 | None:intergenic | 35.0% |
| !! | CAGGTTATGATCCTTTTTCA+AGG | - | chr3_1:10036802-10036821 | Msa0348180:CDS | 35.0% |
| !!! | ATGATCCTTTTTCAAGGAGA+TGG | - | chr3_1:10036808-10036827 | Msa0348180:CDS | 35.0% |
| CAGAGAATTGAAGAAGTTGT+TGG | - | chr3_1:10037128-10037147 | Msa0348180:CDS | 35.0% | |
| GTGATTACAAGAGAAGAAGA+GGG | - | chr3_1:10037204-10037223 | Msa0348180:CDS | 35.0% | |
| ! | GATGATGACTCTGATGATGA+TGG | - | chr3_1:10035535-10035554 | Msa0348180:CDS | 40.0% |
| AGGAGTGATGAATCTGATGT+TGG | - | chr3_1:10035580-10035599 | Msa0348180:CDS | 40.0% | |
| TGTTGGCGATGATCTTTACA+AGG | - | chr3_1:10035597-10035616 | Msa0348180:CDS | 40.0% | |
| CGATGATCTTTACAAGGATG+AGG | - | chr3_1:10035603-10035622 | Msa0348180:CDS | 40.0% | |
| CATCTACTAGATCTTCTGAC+AGG | - | chr3_1:10035800-10035819 | Msa0348180:CDS | 40.0% | |
| ! | GGGTCTAAAATTTCAGGATC+AGG | - | chr3_1:10035910-10035929 | Msa0348180:CDS | 40.0% |
| TGGCTTGAGCTACTGAAATT+AGG | + | chr3_1:10035958-10035977 | None:intergenic | 40.0% | |
| GCCATAGTGAAAGTGAAAGT+AGG | - | chr3_1:10035974-10035993 | Msa0348180:CDS | 40.0% | |
| GATGATGACAAGATAATGCC+TGG | - | chr3_1:10036054-10036073 | Msa0348180:CDS | 40.0% | |
| ! | AACGATGGCTTTTCAAATCC+AGG | + | chr3_1:10036075-10036094 | None:intergenic | 40.0% |
| !!! | GTTTATGGAGCCCTTTTTTG+AGG | - | chr3_1:10036143-10036162 | Msa0348180:CDS | 40.0% |
| !! | TGTTTCGTTAGGGTTGGTAT+TGG | - | chr3_1:10036180-10036199 | Msa0348180:CDS | 40.0% |
| GGTGAAAAATGTTGATGCCT+CGG | - | chr3_1:10036239-10036258 | Msa0348180:CDS | 40.0% | |
| TGTTTAAACTCCTCCTCAAG+CGG | + | chr3_1:10036381-10036400 | None:intergenic | 40.0% | |
| TTGAGGAGGAGTTTAAACAG+TGG | - | chr3_1:10036382-10036401 | Msa0348180:CDS | 40.0% | |
| TGAGGAGGAGTTTAAACAGT+GGG | - | chr3_1:10036383-10036402 | Msa0348180:CDS | 40.0% | |
| !! | GGAGTTTAAACAGTGGGTTA+AGG | - | chr3_1:10036389-10036408 | Msa0348180:CDS | 40.0% |
| TTCTAACATCTGCTTCACAG+TGG | + | chr3_1:10036511-10036530 | None:intergenic | 40.0% | |
| AGAAAAAATCTATCTCGCGG+AGG | - | chr3_1:10036532-10036551 | Msa0348180:CDS | 40.0% | |
| TTCTCAGCTGCAACATTTAG+TGG | + | chr3_1:10036558-10036577 | None:intergenic | 40.0% | |
| ACTAAATGTTGCAGCTGAGA+AGG | - | chr3_1:10036557-10036576 | Msa0348180:CDS | 40.0% | |
| !! | CCAATTCTTGCAGTTTTGTC+TGG | + | chr3_1:10036647-10036666 | None:intergenic | 40.0% |
| CCAGACAAAACTGCAAGAAT+TGG | - | chr3_1:10036644-10036663 | Msa0348180:CDS | 40.0% | |
| GACAAAACTGCAAGAATTGG+AGG | - | chr3_1:10036647-10036666 | Msa0348180:CDS | 40.0% | |
| CTGAGATGAACAGAAAGAAC+AGG | - | chr3_1:10036715-10036734 | Msa0348180:CDS | 40.0% | |
| CTAGTCCATCTCCTTGAAAA+AGG | + | chr3_1:10036816-10036835 | None:intergenic | 40.0% | |
| TAATTCAAAACCGGCTGAAG+AGG | - | chr3_1:10036851-10036870 | Msa0348180:CDS | 40.0% | |
| GCAGCTGGAAATTATACTTC+TGG | - | chr3_1:10036876-10036895 | Msa0348180:CDS | 40.0% | |
| GCTGGAAATTATACTTCTGG+TGG | - | chr3_1:10036879-10036898 | Msa0348180:CDS | 40.0% | |
| CTAGCAATGTGGCAAAAGTT+TGG | - | chr3_1:10037065-10037084 | Msa0348180:CDS | 40.0% | |
| CATCAGCTGACATTAACAGT+TGG | - | chr3_1:10037182-10037201 | Msa0348180:CDS | 40.0% | |
| GGTGATTACAAGAGAAGAAG+AGG | - | chr3_1:10037203-10037222 | Msa0348180:CDS | 40.0% | |
| ! | GATGATGACTCTGATGATGA+TGG | - | chr3_1:10035535-10035554 | Msa0348180:CDS | 40.0% |
| AGGAGTGATGAATCTGATGT+TGG | - | chr3_1:10035580-10035599 | Msa0348180:CDS | 40.0% | |
| TGTTGGCGATGATCTTTACA+AGG | - | chr3_1:10035597-10035616 | Msa0348180:CDS | 40.0% | |
| CGATGATCTTTACAAGGATG+AGG | - | chr3_1:10035603-10035622 | Msa0348180:CDS | 40.0% | |
| CATCTACTAGATCTTCTGAC+AGG | - | chr3_1:10035800-10035819 | Msa0348180:CDS | 40.0% | |
| ! | GGGTCTAAAATTTCAGGATC+AGG | - | chr3_1:10035910-10035929 | Msa0348180:CDS | 40.0% |
| TGGCTTGAGCTACTGAAATT+AGG | + | chr3_1:10035958-10035977 | None:intergenic | 40.0% | |
| GCCATAGTGAAAGTGAAAGT+AGG | - | chr3_1:10035974-10035993 | Msa0348180:CDS | 40.0% | |
| GATGATGACAAGATAATGCC+TGG | - | chr3_1:10036054-10036073 | Msa0348180:CDS | 40.0% | |
| ! | AACGATGGCTTTTCAAATCC+AGG | + | chr3_1:10036075-10036094 | None:intergenic | 40.0% |
| !!! | GTTTATGGAGCCCTTTTTTG+AGG | - | chr3_1:10036143-10036162 | Msa0348180:CDS | 40.0% |
| !! | TGTTTCGTTAGGGTTGGTAT+TGG | - | chr3_1:10036180-10036199 | Msa0348180:CDS | 40.0% |
| GGTGAAAAATGTTGATGCCT+CGG | - | chr3_1:10036239-10036258 | Msa0348180:CDS | 40.0% | |
| TGTTTAAACTCCTCCTCAAG+CGG | + | chr3_1:10036381-10036400 | None:intergenic | 40.0% | |
| TTGAGGAGGAGTTTAAACAG+TGG | - | chr3_1:10036382-10036401 | Msa0348180:CDS | 40.0% | |
| TGAGGAGGAGTTTAAACAGT+GGG | - | chr3_1:10036383-10036402 | Msa0348180:CDS | 40.0% | |
| !! | GGAGTTTAAACAGTGGGTTA+AGG | - | chr3_1:10036389-10036408 | Msa0348180:CDS | 40.0% |
| TTCTAACATCTGCTTCACAG+TGG | + | chr3_1:10036511-10036530 | None:intergenic | 40.0% | |
| AGAAAAAATCTATCTCGCGG+AGG | - | chr3_1:10036532-10036551 | Msa0348180:CDS | 40.0% | |
| TTCTCAGCTGCAACATTTAG+TGG | + | chr3_1:10036558-10036577 | None:intergenic | 40.0% | |
| ACTAAATGTTGCAGCTGAGA+AGG | - | chr3_1:10036557-10036576 | Msa0348180:CDS | 40.0% | |
| !! | CCAATTCTTGCAGTTTTGTC+TGG | + | chr3_1:10036647-10036666 | None:intergenic | 40.0% |
| CCAGACAAAACTGCAAGAAT+TGG | - | chr3_1:10036644-10036663 | Msa0348180:CDS | 40.0% | |
| GACAAAACTGCAAGAATTGG+AGG | - | chr3_1:10036647-10036666 | Msa0348180:CDS | 40.0% | |
| CTGAGATGAACAGAAAGAAC+AGG | - | chr3_1:10036715-10036734 | Msa0348180:CDS | 40.0% | |
| CTAGTCCATCTCCTTGAAAA+AGG | + | chr3_1:10036816-10036835 | None:intergenic | 40.0% | |
| TAATTCAAAACCGGCTGAAG+AGG | - | chr3_1:10036851-10036870 | Msa0348180:CDS | 40.0% | |
| GCAGCTGGAAATTATACTTC+TGG | - | chr3_1:10036876-10036895 | Msa0348180:CDS | 40.0% | |
| GCTGGAAATTATACTTCTGG+TGG | - | chr3_1:10036879-10036898 | Msa0348180:CDS | 40.0% | |
| CTAGCAATGTGGCAAAAGTT+TGG | - | chr3_1:10037065-10037084 | Msa0348180:CDS | 40.0% | |
| CATCAGCTGACATTAACAGT+TGG | - | chr3_1:10037182-10037201 | Msa0348180:CDS | 40.0% | |
| GGTGATTACAAGAGAAGAAG+AGG | - | chr3_1:10037203-10037222 | Msa0348180:CDS | 40.0% | |
| TTATACCAGCAGCCTCCAAA+AGG | + | chr3_1:10035462-10035481 | None:intergenic | 45.0% | |
| ATCAGAGTCATCATCGTCTC+CGG | + | chr3_1:10035530-10035549 | None:intergenic | 45.0% | |
| !! | GATGACTCTGATGATGATGG+TGG | - | chr3_1:10035538-10035557 | Msa0348180:CDS | 45.0% |
| ATAGCATCCAAGCGTGACAA+GGG | - | chr3_1:10035724-10035743 | Msa0348180:CDS | 45.0% | |
| TACATTTCCCTTGTCACGCT+TGG | + | chr3_1:10035734-10035753 | None:intergenic | 45.0% | |
| GATGACATCACACGAGAAGA+CGG | + | chr3_1:10035784-10035803 | None:intergenic | 45.0% | |
| TGAATGAACTGCGTGCTAAG+AGG | - | chr3_1:10035845-10035864 | Msa0348180:CDS | 45.0% | |
| TTCAACATCCTCGTCACTAC+GGG | + | chr3_1:10036001-10036020 | None:intergenic | 45.0% | |
| CTTCAACATCCTCGTCACTA+CGG | + | chr3_1:10036002-10036021 | None:intergenic | 45.0% | |
| ! | GTTGGTTGTTTCGTTAGGGT+TGG | - | chr3_1:10036174-10036193 | Msa0348180:CDS | 45.0% |
| ! | GTATTGGCAGGTCAAAGACT+GGG | - | chr3_1:10036196-10036215 | Msa0348180:CDS | 45.0% |
| ACCATACAGAGCCTGTAGAT+AGG | + | chr3_1:10036222-10036241 | None:intergenic | 45.0% | |
| ATAGAGTCGATTAGGATCCG+AGG | + | chr3_1:10036259-10036278 | None:intergenic | 45.0% | |
| TTTAAACTCCTCCTCAAGCG+GGG | + | chr3_1:10036379-10036398 | None:intergenic | 45.0% | |
| GTTTAAACTCCTCCTCAAGC+GGG | + | chr3_1:10036380-10036399 | None:intergenic | 45.0% | |
| GTTAAGGAAGTAGAGCGAAG+TGG | - | chr3_1:10036405-10036424 | Msa0348180:CDS | 45.0% | |
| TGAGAAGGACCGGTTGAAAA+GGG | - | chr3_1:10036572-10036591 | Msa0348180:CDS | 45.0% | |
| GAAAGCAAGAACGATGCAAC+CGG | - | chr3_1:10036609-10036628 | Msa0348180:CDS | 45.0% | |
| TGTCTGGATCTTCTCTACTC+CGG | + | chr3_1:10036631-10036650 | None:intergenic | 45.0% | |
| TGCAAGAATTGGAGGAATCC+CGG | - | chr3_1:10036655-10036674 | Msa0348180:CDS | 45.0% | |
| !! | TAAAGCATTGAAAGCAGGGG+AGG | - | chr3_1:10036779-10036798 | Msa0348180:CDS | 45.0% |
| !! | CAAGGAGATGGACTAGATCA+AGG | - | chr3_1:10036820-10036839 | Msa0348180:CDS | 45.0% |
| ! | TTATACTTCTGGTGGTGCAG+TGG | - | chr3_1:10036887-10036906 | Msa0348180:CDS | 45.0% |
| ! | TATACTTCTGGTGGTGCAGT+GGG | - | chr3_1:10036888-10036907 | Msa0348180:CDS | 45.0% |
| TGCCAATATCGCTAGCAATG+TGG | - | chr3_1:10037054-10037073 | Msa0348180:CDS | 45.0% | |
| TGCCACATTGCTAGCGATAT+TGG | + | chr3_1:10037059-10037078 | None:intergenic | 45.0% | |
| GCAATGTGGCAAAAGTTTGG+TGG | - | chr3_1:10037068-10037087 | Msa0348180:CDS | 45.0% | |
| ! | TTTCGAGTCCCAGAAAACGA+TGG | - | chr3_1:10037152-10037171 | Msa0348180:CDS | 45.0% |
| ! | GACTCCTTCCATCGTTTTCT+GGG | + | chr3_1:10037163-10037182 | None:intergenic | 45.0% |
| ! | TGACTCCTTCCATCGTTTTC+TGG | + | chr3_1:10037164-10037183 | None:intergenic | 45.0% |
| TTATACCAGCAGCCTCCAAA+AGG | + | chr3_1:10035462-10035481 | None:intergenic | 45.0% | |
| ATCAGAGTCATCATCGTCTC+CGG | + | chr3_1:10035530-10035549 | None:intergenic | 45.0% | |
| !! | GATGACTCTGATGATGATGG+TGG | - | chr3_1:10035538-10035557 | Msa0348180:CDS | 45.0% |
| ATAGCATCCAAGCGTGACAA+GGG | - | chr3_1:10035724-10035743 | Msa0348180:CDS | 45.0% | |
| TACATTTCCCTTGTCACGCT+TGG | + | chr3_1:10035734-10035753 | None:intergenic | 45.0% | |
| GATGACATCACACGAGAAGA+CGG | + | chr3_1:10035784-10035803 | None:intergenic | 45.0% | |
| TGAATGAACTGCGTGCTAAG+AGG | - | chr3_1:10035845-10035864 | Msa0348180:CDS | 45.0% | |
| TTCAACATCCTCGTCACTAC+GGG | + | chr3_1:10036001-10036020 | None:intergenic | 45.0% | |
| CTTCAACATCCTCGTCACTA+CGG | + | chr3_1:10036002-10036021 | None:intergenic | 45.0% | |
| ! | GTTGGTTGTTTCGTTAGGGT+TGG | - | chr3_1:10036174-10036193 | Msa0348180:CDS | 45.0% |
| ! | GTATTGGCAGGTCAAAGACT+GGG | - | chr3_1:10036196-10036215 | Msa0348180:CDS | 45.0% |
| ACCATACAGAGCCTGTAGAT+AGG | + | chr3_1:10036222-10036241 | None:intergenic | 45.0% | |
| ATAGAGTCGATTAGGATCCG+AGG | + | chr3_1:10036259-10036278 | None:intergenic | 45.0% | |
| TTTAAACTCCTCCTCAAGCG+GGG | + | chr3_1:10036379-10036398 | None:intergenic | 45.0% | |
| GTTTAAACTCCTCCTCAAGC+GGG | + | chr3_1:10036380-10036399 | None:intergenic | 45.0% | |
| GTTAAGGAAGTAGAGCGAAG+TGG | - | chr3_1:10036405-10036424 | Msa0348180:CDS | 45.0% | |
| TGAGAAGGACCGGTTGAAAA+GGG | - | chr3_1:10036572-10036591 | Msa0348180:CDS | 45.0% | |
| GAAAGCAAGAACGATGCAAC+CGG | - | chr3_1:10036609-10036628 | Msa0348180:CDS | 45.0% | |
| TGTCTGGATCTTCTCTACTC+CGG | + | chr3_1:10036631-10036650 | None:intergenic | 45.0% | |
| TGCAAGAATTGGAGGAATCC+CGG | - | chr3_1:10036655-10036674 | Msa0348180:CDS | 45.0% | |
| !! | TAAAGCATTGAAAGCAGGGG+AGG | - | chr3_1:10036779-10036798 | Msa0348180:CDS | 45.0% |
| !! | CAAGGAGATGGACTAGATCA+AGG | - | chr3_1:10036820-10036839 | Msa0348180:CDS | 45.0% |
| ! | TTATACTTCTGGTGGTGCAG+TGG | - | chr3_1:10036887-10036906 | Msa0348180:CDS | 45.0% |
| ! | TATACTTCTGGTGGTGCAGT+GGG | - | chr3_1:10036888-10036907 | Msa0348180:CDS | 45.0% |
| TGCCAATATCGCTAGCAATG+TGG | - | chr3_1:10037054-10037073 | Msa0348180:CDS | 45.0% | |
| TGCCACATTGCTAGCGATAT+TGG | + | chr3_1:10037059-10037078 | None:intergenic | 45.0% | |
| GCAATGTGGCAAAAGTTTGG+TGG | - | chr3_1:10037068-10037087 | Msa0348180:CDS | 45.0% | |
| ! | TTTCGAGTCCCAGAAAACGA+TGG | - | chr3_1:10037152-10037171 | Msa0348180:CDS | 45.0% |
| ! | GACTCCTTCCATCGTTTTCT+GGG | + | chr3_1:10037163-10037182 | None:intergenic | 45.0% |
| ! | TGACTCCTTCCATCGTTTTC+TGG | + | chr3_1:10037164-10037183 | None:intergenic | 45.0% |
| !! | AATGACCTTTTGGAGGCTGC+TGG | - | chr3_1:10035454-10035473 | Msa0348180:CDS | 50.0% |
| GTCTGATAGGGCTGCTAAGA+AGG | - | chr3_1:10035678-10035697 | Msa0348180:CDS | 50.0% | |
| GTCACGCTTGGATGCTATCT+TGG | + | chr3_1:10035722-10035741 | None:intergenic | 50.0% | |
| GATAGCATCCAAGCGTGACA+AGG | - | chr3_1:10035723-10035742 | Msa0348180:CDS | 50.0% | |
| ATCACACGAGAAGACGGAAG+AGG | + | chr3_1:10035778-10035797 | None:intergenic | 50.0% | |
| TTCTGACAGGTCAGCTGCTA+AGG | - | chr3_1:10035813-10035832 | Msa0348180:CDS | 50.0% | |
| ! | TCAGGGGGTTTTCCGCAAAT+AGG | - | chr3_1:10035928-10035947 | Msa0348180:CDS | 50.0% |
| ! | CAGGGGGTTTTCCGCAAATA+GGG | - | chr3_1:10035929-10035948 | Msa0348180:CDS | 50.0% |
| !! | TCGTTAGGGTTGGTATTGGC+AGG | - | chr3_1:10036184-10036203 | Msa0348180:CDS | 50.0% |
| !! | GGTATTGGCAGGTCAAAGAC+TGG | - | chr3_1:10036195-10036214 | Msa0348180:CDS | 50.0% |
| CAAAGACTGGGCCTATCTAC+AGG | - | chr3_1:10036208-10036227 | Msa0348180:CDS | 50.0% | |
| GCCTATCTACAGGCTCTGTA+TGG | - | chr3_1:10036218-10036237 | Msa0348180:CDS | 50.0% | |
| TTAAACTCCTCCTCAAGCGG+GGG | + | chr3_1:10036378-10036397 | None:intergenic | 50.0% | |
| AAGGAAGTAGAGCGAAGTGG+TGG | - | chr3_1:10036408-10036427 | Msa0348180:CDS | 50.0% | |
| CATCTAGCCTCTTCAGCATC+CGG | + | chr3_1:10036434-10036453 | None:intergenic | 50.0% | |
| GATGCTGAAGAGGCTAGATG+TGG | - | chr3_1:10036434-10036453 | Msa0348180:CDS | 50.0% | |
| ATGTTGCAGCTGAGAAGGAC+CGG | - | chr3_1:10036562-10036581 | Msa0348180:CDS | 50.0% | |
| CTGAGAAGGACCGGTTGAAA+AGG | - | chr3_1:10036571-10036590 | Msa0348180:CDS | 50.0% | |
| GGACCGGTTGAAAAGGGAAT+TGG | - | chr3_1:10036578-10036597 | Msa0348180:CDS | 50.0% | |
| TGGAGGAATCCCGGAAATCT+CGG | - | chr3_1:10036664-10036683 | Msa0348180:CDS | 50.0% | |
| TGGGATTGGAGCTGGTATGA+CGG | - | chr3_1:10036926-10036945 | Msa0348180:CDS | 50.0% | |
| ACAAGAGCTCCAGTGGATGA+AGG | - | chr3_1:10036999-10037018 | Msa0348180:CDS | 50.0% | |
| GACTCTGTTCCTTCATCCAC+TGG | + | chr3_1:10037011-10037030 | None:intergenic | 50.0% | |
| ! | CAAAAGTTTGGTGGAGCGCA+GGG | - | chr3_1:10037077-10037096 | Msa0348180:CDS | 50.0% |
| GAGTCCCAGAAAACGATGGA+AGG | - | chr3_1:10037156-10037175 | Msa0348180:CDS | 50.0% | |
| !! | AATGACCTTTTGGAGGCTGC+TGG | - | chr3_1:10035454-10035473 | Msa0348180:CDS | 50.0% |
| GTCTGATAGGGCTGCTAAGA+AGG | - | chr3_1:10035678-10035697 | Msa0348180:CDS | 50.0% | |
| GTCACGCTTGGATGCTATCT+TGG | + | chr3_1:10035722-10035741 | None:intergenic | 50.0% | |
| GATAGCATCCAAGCGTGACA+AGG | - | chr3_1:10035723-10035742 | Msa0348180:CDS | 50.0% | |
| ATCACACGAGAAGACGGAAG+AGG | + | chr3_1:10035778-10035797 | None:intergenic | 50.0% | |
| TTCTGACAGGTCAGCTGCTA+AGG | - | chr3_1:10035813-10035832 | Msa0348180:CDS | 50.0% | |
| ! | TCAGGGGGTTTTCCGCAAAT+AGG | - | chr3_1:10035928-10035947 | Msa0348180:CDS | 50.0% |
| ! | CAGGGGGTTTTCCGCAAATA+GGG | - | chr3_1:10035929-10035948 | Msa0348180:CDS | 50.0% |
| !! | TCGTTAGGGTTGGTATTGGC+AGG | - | chr3_1:10036184-10036203 | Msa0348180:CDS | 50.0% |
| !! | GGTATTGGCAGGTCAAAGAC+TGG | - | chr3_1:10036195-10036214 | Msa0348180:CDS | 50.0% |
| CAAAGACTGGGCCTATCTAC+AGG | - | chr3_1:10036208-10036227 | Msa0348180:CDS | 50.0% | |
| GCCTATCTACAGGCTCTGTA+TGG | - | chr3_1:10036218-10036237 | Msa0348180:CDS | 50.0% | |
| TTAAACTCCTCCTCAAGCGG+GGG | + | chr3_1:10036378-10036397 | None:intergenic | 50.0% | |
| AAGGAAGTAGAGCGAAGTGG+TGG | - | chr3_1:10036408-10036427 | Msa0348180:CDS | 50.0% | |
| CATCTAGCCTCTTCAGCATC+CGG | + | chr3_1:10036434-10036453 | None:intergenic | 50.0% | |
| GATGCTGAAGAGGCTAGATG+TGG | - | chr3_1:10036434-10036453 | Msa0348180:CDS | 50.0% | |
| ATGTTGCAGCTGAGAAGGAC+CGG | - | chr3_1:10036562-10036581 | Msa0348180:CDS | 50.0% | |
| CTGAGAAGGACCGGTTGAAA+AGG | - | chr3_1:10036571-10036590 | Msa0348180:CDS | 50.0% | |
| GGACCGGTTGAAAAGGGAAT+TGG | - | chr3_1:10036578-10036597 | Msa0348180:CDS | 50.0% | |
| TGGAGGAATCCCGGAAATCT+CGG | - | chr3_1:10036664-10036683 | Msa0348180:CDS | 50.0% | |
| TGGGATTGGAGCTGGTATGA+CGG | - | chr3_1:10036926-10036945 | Msa0348180:CDS | 50.0% | |
| ACAAGAGCTCCAGTGGATGA+AGG | - | chr3_1:10036999-10037018 | Msa0348180:CDS | 50.0% | |
| GACTCTGTTCCTTCATCCAC+TGG | + | chr3_1:10037011-10037030 | None:intergenic | 50.0% | |
| ! | CAAAAGTTTGGTGGAGCGCA+GGG | - | chr3_1:10037077-10037096 | Msa0348180:CDS | 50.0% |
| GAGTCCCAGAAAACGATGGA+AGG | - | chr3_1:10037156-10037175 | Msa0348180:CDS | 50.0% | |
| !! | TGATGGTGGTTCTGACCGTG+AGG | - | chr3_1:10035552-10035571 | Msa0348180:CDS | 55.0% |
| CATCACTCCTGTCCACCTCA+CGG | + | chr3_1:10035570-10035589 | None:intergenic | 55.0% | |
| ACACGAGAAGACGGAAGAGG+AGG | + | chr3_1:10035775-10035794 | None:intergenic | 55.0% | |
| GACAGGTCAGCTGCTAAGGA+TGG | - | chr3_1:10035817-10035836 | Msa0348180:CDS | 55.0% | |
| TTCAGCTCGCGATGTGCTTC+CGG | + | chr3_1:10035886-10035905 | None:intergenic | 55.0% | |
| AGCACATCGCGAGCTGAAAG+AGG | - | chr3_1:10035888-10035907 | Msa0348180:CDS | 55.0% | |
| GCACATCGCGAGCTGAAAGA+GGG | - | chr3_1:10035889-10035908 | Msa0348180:CDS | 55.0% | |
| CACATCGCGAGCTGAAAGAG+GGG | - | chr3_1:10035890-10035909 | Msa0348180:CDS | 55.0% | |
| AAGTAGGTCCCGTAGTGACG+AGG | - | chr3_1:10035990-10036009 | Msa0348180:CDS | 55.0% | |
| GAAATGAGACCTCTGCTGCG+AGG | - | chr3_1:10036325-10036344 | Msa0348180:CDS | 55.0% | |
| AAGTAGAGCGAAGTGGTGGC+CGG | - | chr3_1:10036412-10036431 | Msa0348180:CDS | 55.0% | |
| GCTGAAGAGGCTAGATGTGG+TGG | - | chr3_1:10036437-10036456 | Msa0348180:CDS | 55.0% | |
| GGAGGAATCCCGGAAATCTC+GGG | - | chr3_1:10036665-10036684 | Msa0348180:CDS | 55.0% | |
| ATCCCGGAAATCTCGGGAGA+AGG | - | chr3_1:10036671-10036690 | Msa0348180:CDS | 55.0% | |
| GTCCTTCTCCCGAGATTTCC+GGG | + | chr3_1:10036676-10036695 | None:intergenic | 55.0% | |
| CGTCCTTCTCCCGAGATTTC+CGG | + | chr3_1:10036677-10036696 | None:intergenic | 55.0% | |
| CTCAGAAAGCCTCAGAGCCT+TGG | + | chr3_1:10036700-10036719 | None:intergenic | 55.0% | |
| !! | TGGGTGATGGAGGCAGCAAT+GGG | - | chr3_1:10036907-10036926 | Msa0348180:CDS | 55.0% |
| GATGGAGGCAGCAATGGGAT+TGG | - | chr3_1:10036912-10036931 | Msa0348180:CDS | 55.0% | |
| AGCAGCAGCTTCCAAAGCCT+CGG | + | chr3_1:10036958-10036977 | None:intergenic | 55.0% | |
| ! | TGCTGCTGGTGCTGGAAAGT+TGG | - | chr3_1:10036971-10036990 | Msa0348180:CDS | 55.0% |
| GGTAGACACAAGAGCTCCAG+TGG | - | chr3_1:10036992-10037011 | Msa0348180:CDS | 55.0% | |
| ! | GCAAAAGTTTGGTGGAGCGC+AGG | - | chr3_1:10037076-10037095 | Msa0348180:CDS | 55.0% |
| GGGAGTTCAGGCAGGGTTTA+TGG | - | chr3_1:10037097-10037116 | Msa0348180:CDS | 55.0% | |
| !! | TGATGGTGGTTCTGACCGTG+AGG | - | chr3_1:10035552-10035571 | Msa0348180:CDS | 55.0% |
| CATCACTCCTGTCCACCTCA+CGG | + | chr3_1:10035570-10035589 | None:intergenic | 55.0% | |
| ACACGAGAAGACGGAAGAGG+AGG | + | chr3_1:10035775-10035794 | None:intergenic | 55.0% | |
| GACAGGTCAGCTGCTAAGGA+TGG | - | chr3_1:10035817-10035836 | Msa0348180:CDS | 55.0% | |
| TTCAGCTCGCGATGTGCTTC+CGG | + | chr3_1:10035886-10035905 | None:intergenic | 55.0% | |
| AGCACATCGCGAGCTGAAAG+AGG | - | chr3_1:10035888-10035907 | Msa0348180:CDS | 55.0% | |
| GCACATCGCGAGCTGAAAGA+GGG | - | chr3_1:10035889-10035908 | Msa0348180:CDS | 55.0% | |
| CACATCGCGAGCTGAAAGAG+GGG | - | chr3_1:10035890-10035909 | Msa0348180:CDS | 55.0% | |
| AAGTAGGTCCCGTAGTGACG+AGG | - | chr3_1:10035990-10036009 | Msa0348180:CDS | 55.0% | |
| GAAATGAGACCTCTGCTGCG+AGG | - | chr3_1:10036325-10036344 | Msa0348180:CDS | 55.0% | |
| AAGTAGAGCGAAGTGGTGGC+CGG | - | chr3_1:10036412-10036431 | Msa0348180:CDS | 55.0% | |
| GCTGAAGAGGCTAGATGTGG+TGG | - | chr3_1:10036437-10036456 | Msa0348180:CDS | 55.0% | |
| GGAGGAATCCCGGAAATCTC+GGG | - | chr3_1:10036665-10036684 | Msa0348180:CDS | 55.0% | |
| ATCCCGGAAATCTCGGGAGA+AGG | - | chr3_1:10036671-10036690 | Msa0348180:CDS | 55.0% | |
| GTCCTTCTCCCGAGATTTCC+GGG | + | chr3_1:10036676-10036695 | None:intergenic | 55.0% | |
| CGTCCTTCTCCCGAGATTTC+CGG | + | chr3_1:10036677-10036696 | None:intergenic | 55.0% | |
| CTCAGAAAGCCTCAGAGCCT+TGG | + | chr3_1:10036700-10036719 | None:intergenic | 55.0% | |
| !! | TGGGTGATGGAGGCAGCAAT+GGG | - | chr3_1:10036907-10036926 | Msa0348180:CDS | 55.0% |
| GATGGAGGCAGCAATGGGAT+TGG | - | chr3_1:10036912-10036931 | Msa0348180:CDS | 55.0% | |
| AGCAGCAGCTTCCAAAGCCT+CGG | + | chr3_1:10036958-10036977 | None:intergenic | 55.0% | |
| ! | TGCTGCTGGTGCTGGAAAGT+TGG | - | chr3_1:10036971-10036990 | Msa0348180:CDS | 55.0% |
| GGTAGACACAAGAGCTCCAG+TGG | - | chr3_1:10036992-10037011 | Msa0348180:CDS | 55.0% | |
| ! | GCAAAAGTTTGGTGGAGCGC+AGG | - | chr3_1:10037076-10037095 | Msa0348180:CDS | 55.0% |
| GGGAGTTCAGGCAGGGTTTA+TGG | - | chr3_1:10037097-10037116 | Msa0348180:CDS | 55.0% | |
| !! | TGGTGGTTCTGACCGTGAGG+TGG | - | chr3_1:10035555-10035574 | Msa0348180:CDS | 60.0% |
| GTTCTGACCGTGAGGTGGAC+AGG | - | chr3_1:10035560-10035579 | Msa0348180:CDS | 60.0% | |
| CGAGAAGACGGAAGAGGAGG+CGG | + | chr3_1:10035772-10035791 | None:intergenic | 60.0% | |
| GAGGCTGAAACAGCGAGAGC+CGG | - | chr3_1:10035864-10035883 | Msa0348180:CDS | 60.0% | |
| ATGAGACCTCTGCTGCGAGG+TGG | - | chr3_1:10036328-10036347 | Msa0348180:CDS | 60.0% | |
| CATTTGCCACCTCGCAGCAG+AGG | + | chr3_1:10036337-10036356 | None:intergenic | 60.0% | |
| CTCTGCTGCGAGGTGGCAAA+TGG | - | chr3_1:10036335-10036354 | Msa0348180:CDS | 60.0% | |
| TGCGAGGTGGCAAATGGCCA+TGG | - | chr3_1:10036341-10036360 | Msa0348180:CDS | 60.0% | |
| CGGGGGAGAATCGCTAACCA+TGG | + | chr3_1:10036361-10036380 | None:intergenic | 60.0% | |
| TAGCGATTCTCCCCCGCTTG+AGG | - | chr3_1:10036365-10036384 | Msa0348180:CDS | 60.0% | |
| ATCTCGGGAGAAGGACGCCA+AGG | - | chr3_1:10036680-10036699 | Msa0348180:CDS | 60.0% | |
| AGAAGGACGCCAAGGCTCTG+AGG | - | chr3_1:10036688-10036707 | Msa0348180:CDS | 60.0% | |
| GCATTGAAAGCAGGGGAGGC+AGG | - | chr3_1:10036783-10036802 | Msa0348180:CDS | 60.0% | |
| ! | TCTGGTGGTGCAGTGGGTGA+TGG | - | chr3_1:10036894-10036913 | Msa0348180:CDS | 60.0% |
| !! | GTGGGTGATGGAGGCAGCAA+TGG | - | chr3_1:10036906-10036925 | Msa0348180:CDS | 60.0% |
| GGCAGCAATGGGATTGGAGC+TGG | - | chr3_1:10036918-10036937 | Msa0348180:CDS | 60.0% | |
| AGCTTCCAAAGCCTCGGCAG+TGG | + | chr3_1:10036952-10036971 | None:intergenic | 60.0% | |
| !! | GAGGCTTTGGAAGCTGCTGC+TGG | - | chr3_1:10036957-10036976 | Msa0348180:CDS | 60.0% |
| TTGGAAGCTGCTGCTGGTGC+TGG | - | chr3_1:10036963-10036982 | Msa0348180:CDS | 60.0% | |
| !! | TGGTGGTTCTGACCGTGAGG+TGG | - | chr3_1:10035555-10035574 | Msa0348180:CDS | 60.0% |
| GTTCTGACCGTGAGGTGGAC+AGG | - | chr3_1:10035560-10035579 | Msa0348180:CDS | 60.0% | |
| CGAGAAGACGGAAGAGGAGG+CGG | + | chr3_1:10035772-10035791 | None:intergenic | 60.0% | |
| GAGGCTGAAACAGCGAGAGC+CGG | - | chr3_1:10035864-10035883 | Msa0348180:CDS | 60.0% | |
| ATGAGACCTCTGCTGCGAGG+TGG | - | chr3_1:10036328-10036347 | Msa0348180:CDS | 60.0% | |
| CATTTGCCACCTCGCAGCAG+AGG | + | chr3_1:10036337-10036356 | None:intergenic | 60.0% | |
| CTCTGCTGCGAGGTGGCAAA+TGG | - | chr3_1:10036335-10036354 | Msa0348180:CDS | 60.0% | |
| TGCGAGGTGGCAAATGGCCA+TGG | - | chr3_1:10036341-10036360 | Msa0348180:CDS | 60.0% | |
| CGGGGGAGAATCGCTAACCA+TGG | + | chr3_1:10036361-10036380 | None:intergenic | 60.0% | |
| TAGCGATTCTCCCCCGCTTG+AGG | - | chr3_1:10036365-10036384 | Msa0348180:CDS | 60.0% | |
| ATCTCGGGAGAAGGACGCCA+AGG | - | chr3_1:10036680-10036699 | Msa0348180:CDS | 60.0% | |
| AGAAGGACGCCAAGGCTCTG+AGG | - | chr3_1:10036688-10036707 | Msa0348180:CDS | 60.0% | |
| GCATTGAAAGCAGGGGAGGC+AGG | - | chr3_1:10036783-10036802 | Msa0348180:CDS | 60.0% | |
| ! | TCTGGTGGTGCAGTGGGTGA+TGG | - | chr3_1:10036894-10036913 | Msa0348180:CDS | 60.0% |
| !! | GTGGGTGATGGAGGCAGCAA+TGG | - | chr3_1:10036906-10036925 | Msa0348180:CDS | 60.0% |
| GGCAGCAATGGGATTGGAGC+TGG | - | chr3_1:10036918-10036937 | Msa0348180:CDS | 60.0% | |
| AGCTTCCAAAGCCTCGGCAG+TGG | + | chr3_1:10036952-10036971 | None:intergenic | 60.0% | |
| !! | GAGGCTTTGGAAGCTGCTGC+TGG | - | chr3_1:10036957-10036976 | Msa0348180:CDS | 60.0% |
| TTGGAAGCTGCTGCTGGTGC+TGG | - | chr3_1:10036963-10036982 | Msa0348180:CDS | 60.0% | |
| CGATTCTCCCCCGCTTGAGG+AGG | - | chr3_1:10036368-10036387 | Msa0348180:CDS | 65.0% | |
| GTGGTGGCCGGATGCTGAAG+AGG | - | chr3_1:10036424-10036443 | Msa0348180:CDS | 65.0% | |
| CCAGCTGCAGCCTCTTCAGC+CGG | + | chr3_1:10036864-10036883 | None:intergenic | 65.0% | |
| ! | GGTGGTGCAGTGGGTGATGG+AGG | - | chr3_1:10036897-10036916 | Msa0348180:CDS | 65.0% |
| TGGTATGACGGCCACTGCCG+AGG | - | chr3_1:10036938-10036957 | Msa0348180:CDS | 65.0% | |
| TGGTGGAGCGCAGGGAGTTC+AGG | - | chr3_1:10037085-10037104 | Msa0348180:CDS | 65.0% | |
| GAGCGCAGGGAGTTCAGGCA+GGG | - | chr3_1:10037090-10037109 | Msa0348180:CDS | 65.0% | |
| CGATTCTCCCCCGCTTGAGG+AGG | - | chr3_1:10036368-10036387 | Msa0348180:CDS | 65.0% | |
| GTGGTGGCCGGATGCTGAAG+AGG | - | chr3_1:10036424-10036443 | Msa0348180:CDS | 65.0% | |
| CCAGCTGCAGCCTCTTCAGC+CGG | + | chr3_1:10036864-10036883 | None:intergenic | 65.0% | |
| ! | GGTGGTGCAGTGGGTGATGG+AGG | - | chr3_1:10036897-10036916 | Msa0348180:CDS | 65.0% |
| TGGTATGACGGCCACTGCCG+AGG | - | chr3_1:10036938-10036957 | Msa0348180:CDS | 65.0% | |
| TGGTGGAGCGCAGGGAGTTC+AGG | - | chr3_1:10037085-10037104 | Msa0348180:CDS | 65.0% | |
| GAGCGCAGGGAGTTCAGGCA+GGG | - | chr3_1:10037090-10037109 | Msa0348180:CDS | 65.0% | |
| CCGGCTGAAGAGGCTGCAGC+TGG | - | chr3_1:10036861-10036880 | Msa0348180:CDS | 70.0% | |
| GACGGCCACTGCCGAGGCTT+TGG | - | chr3_1:10036944-10036963 | Msa0348180:CDS | 70.0% | |
| GGAGCGCAGGGAGTTCAGGC+AGG | - | chr3_1:10037089-10037108 | Msa0348180:CDS | 70.0% | |
| CCGGCTGAAGAGGCTGCAGC+TGG | - | chr3_1:10036861-10036880 | Msa0348180:CDS | 70.0% | |
| GACGGCCACTGCCGAGGCTT+TGG | - | chr3_1:10036944-10036963 | Msa0348180:CDS | 70.0% | |
| GGAGCGCAGGGAGTTCAGGC+AGG | - | chr3_1:10037089-10037108 | Msa0348180:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 10035439 | 10037235 | 10035439 | ID=Msa0348180;Name=Msa0348180 |
| chr3_1 | mRNA | 10035439 | 10037235 | 10035439 | ID=Msa0348180-mRNA-1;Parent=Msa0348180;Name=Msa0348180-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|598 |
| chr3_1 | exon | 10035439 | 10037235 | 10035439 | ID=Msa0348180-mRNA-1:exon:2814;Parent=Msa0348180-mRNA-1 |
| chr3_1 | CDS | 10035439 | 10037235 | 10035439 | ID=Msa0348180-mRNA-1:cds;Parent=Msa0348180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
