AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0998590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0998590 MtrunA17_Chr6g0484301 97.550 694 16 1 1 694 1 693 0.0 1387
Msa0998590 MtrunA17_Chr1g0212431 43.832 689 347 7 39 694 53 734 0.0 547
Msa0998590 MtrunA17_Chr7g0253851 33.186 678 393 15 48 684 5 663 2.91e-105 335
Msa0998590 MtrunA17_Chr2g0278061 32.701 633 372 16 92 682 153 773 2.23e-83 280
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0998590 AT1G48840.1 64.595 692 239 6 4 693 2 689 0.0 911
Msa0998590 AT3G18350.3 63.265 686 247 4 4 687 2 684 0.0 882
Msa0998590 AT3G18350.1 63.265 686 247 4 4 687 2 684 0.0 882
Msa0998590 AT3G18350.2 63.265 686 247 4 4 687 2 684 0.0 882
Msa0998590 AT5G23390.1 42.441 721 376 6 9 694 13 729 0.0 535
Msa0998590 AT2G21720.2 30.000 680 421 14 48 684 64 731 6.04e-93 305
Msa0998590 AT2G21720.1 29.985 677 422 14 48 684 64 728 1.94e-92 303
Msa0998590 AT1G71240.2 30.638 705 421 21 32 682 105 795 2.59e-78 267
Msa0998590 AT1G71240.1 31.763 658 388 19 73 682 152 796 5.94e-78 266
Msa0998590 AT1G71240.3 30.700 557 322 20 32 538 105 647 4.01e-51 189

Find 179 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCAATCTTTGCTAAAT+TGG 0.125465 6_4:+79686460 Msa0998590:CDS
ATTTCAAACATTCCTATATA+TGG 0.166206 6_4:-79688224 None:intergenic
GATGATCCATTGAAGTCTTC+TGG 0.177764 6_4:+79686483 Msa0998590:CDS
CTGGATTCTGTCTGTGAAAA+AGG 0.178729 6_4:+79680206 Msa0998590:five_prime_UTR
ACCGAGGTACTTATCATATA+TGG 0.211443 6_4:-79683440 None:intergenic
ATAAGCAAGTTTGGAATTAA+AGG 0.213432 6_4:+79684549 Msa0998590:CDS
TCTAACTTAGGATTCGTATT+TGG 0.219684 6_4:+79684822 Msa0998590:CDS
CACACGCAATCATCAATTTC+TGG 0.221655 6_4:+79680187 Msa0998590:five_prime_UTR
CACAAATTTATAAGCAAGTT+TGG 0.224728 6_4:+79684540 Msa0998590:CDS
CTGGAATTTCCTGAGCTTAA+AGG 0.228580 6_4:+79684465 Msa0998590:CDS
TGATGGTATCGACACTAATT+TGG 0.238972 6_4:+79684995 Msa0998590:CDS
CATATCGTGATGGATTCTTT+AGG 0.244347 6_4:-79682428 None:intergenic
GACATGCTCGTCGTGATTAT+TGG 0.260318 6_4:+79684487 Msa0998590:CDS
CCCCATGGTCCAGTCAATTC+AGG 0.279993 6_4:-79684298 None:intergenic
ATAAAATTCTAGGAATTTCT+TGG 0.284887 6_4:-79688302 None:intergenic
ACGATATGCAAGGAACTTAT+TGG 0.293732 6_4:+79682443 Msa0998590:CDS
TTATCTCTTTCCAGTTTAAC+AGG 0.295578 6_4:-79687969 None:intergenic
TAAAAGATGGATCACTTAAA+TGG 0.300961 6_4:+79682040 Msa0998590:CDS
AGTGATGATGGCGAAATCTT+TGG 0.310756 6_4:+79688009 Msa0998590:exon
AATTTATGTGATCAGCTTCC+AGG 0.314602 6_4:+79684684 Msa0998590:CDS
GACCTCTTCAAGTGATCTTC+AGG 0.321451 6_4:+79682377 Msa0998590:CDS
ATATCGTGATGGATTCTTTA+GGG 0.321662 6_4:-79682427 None:intergenic
ACCAGCTGCTCCTGTTAAAC+TGG 0.336451 6_4:+79687959 Msa0998590:CDS
TCTATCGGCAGGATTGGTTT+TGG 0.337647 6_4:+79687812 Msa0998590:CDS
TCTTCAATCTTTGCTAAATT+GGG 0.343179 6_4:+79686461 Msa0998590:CDS
ATAGAATACATTCCACTTGC+AGG 0.345829 6_4:-79684780 None:intergenic
CTCTCTGTGCTAGCCTTCCT+TGG 0.348797 6_4:-79687900 None:intergenic
TGTTCTTCGGTTACATCATC+TGG 0.349941 6_4:+79686514 Msa0998590:CDS
AGTTGTTCCATTGTATTCAT+TGG 0.355205 6_4:-79687143 None:intergenic
TAAGCAAGTTTGGAATTAAA+GGG 0.358316 6_4:+79684550 Msa0998590:CDS
CATCCAAGATATCAGTTCTC+TGG 0.363281 6_4:+79684629 Msa0998590:CDS
CATCTTGACAAGATAGTAGT+AGG 0.366864 6_4:+79681964 Msa0998590:five_prime_UTR
TGTTGGAGAAACGACTTTGT+TGG 0.374602 6_4:+79684896 Msa0998590:CDS
ATGATCCATTGAAGTCTTCT+GGG 0.375673 6_4:+79686484 Msa0998590:CDS
AATAATGACGTTGGCAATGA+TGG 0.389470 6_4:-79683362 None:intergenic
ATACATTCCACTTGCAGGCT+TGG 0.398499 6_4:-79684775 None:intergenic
TAAAATTCTAGGAATTTCTT+GGG 0.407684 6_4:-79688301 None:intergenic
TAGATCAGAACCAGCTGTAC+TGG 0.409211 6_4:+79684446 Msa0998590:intron
CCGAGGTACTTATCATATAT+GGG 0.409489 6_4:-79683439 None:intergenic
TTTCAAACATTCCTATATAT+GGG 0.410356 6_4:-79688223 None:intergenic
TATTATAAATTGCAGGGGTT+GGG 0.412605 6_4:+79687010 Msa0998590:intron
GTTGACGGGGTTAAAGTTGA+TGG 0.413859 6_4:+79684978 Msa0998590:CDS
GAGAAGATTCTTGAGATTGA+TGG 0.415310 6_4:+79683862 Msa0998590:CDS
TCCATTGTATTCATTGGTGG+AGG 0.417119 6_4:-79687137 None:intergenic
TGCTGAAGAATTTGAGGAGA+TGG 0.417912 6_4:+79682086 Msa0998590:CDS
GATCACTTGAAGAGGTCTTA+AGG 0.418496 6_4:-79682371 None:intergenic
AGAAGAGAATCATTCAATAC+AGG 0.423857 6_4:-79684654 None:intergenic
TTGGACACGGTTTCTAACTT+AGG 0.424685 6_4:+79684810 Msa0998590:CDS
GAGGTGCTTACTTTGTCAAC+TGG 0.429289 6_4:+79683400 Msa0998590:CDS
ATTATTGGCTAGCCATCATC+AGG 0.429481 6_4:+79684502 Msa0998590:CDS
GAAAGACTTACATTAGTAAG+AGG 0.432590 6_4:-79682591 None:intergenic
GGCCCAGAGAACTGATATCT+TGG 0.436221 6_4:-79684632 None:intergenic
TCCCAGCTGTAATTTGAGAT+TGG 0.439481 6_4:-79688187 None:intergenic
TTTATCCTCTAGATGAACTT+AGG 0.443113 6_4:+79686433 Msa0998590:CDS
ATATTTCTTCTCAAGTTTCG+TGG 0.443678 6_4:+79687221 Msa0998590:CDS
ATGGAAAATTCACCTTCTGC+TGG 0.443978 6_4:+79682105 Msa0998590:CDS
CTGAGTCGCTTCCCATATAT+AGG 0.448936 6_4:+79688212 Msa0998590:three_prime_UTR
GCAACGGAGAAGATGGCATT+TGG 0.458707 6_4:+79687786 Msa0998590:CDS
GGGAGAGGAGATTTAGAGAA+TGG 0.459744 6_4:+79687925 Msa0998590:CDS
AATGTATTCTATCTCGGTCT+TGG 0.460063 6_4:+79684791 Msa0998590:CDS
CGGCACAGGCAACAGTTGAC+GGG 0.464197 6_4:+79684964 Msa0998590:CDS
TCATTGAAAGCGCAAATATC+CGG 0.466068 6_4:+79682489 Msa0998590:CDS
CACTAATTTGGCTGTCATGA+AGG 0.468410 6_4:+79685007 Msa0998590:CDS
CATTGTATTCATTGGTGGAG+GGG 0.468825 6_4:-79687135 None:intergenic
CCTACCTTGATTAAAACATC+TGG 0.469406 6_4:-79687087 None:intergenic
AGTAGTAGGTTTAGTAGAGA+TGG 0.470283 6_4:+79681978 Msa0998590:exon
TAGACCTTCAAGCATAGCTC+TGG 0.471427 6_4:-79682016 None:intergenic
ACCTGAATTGACTGGACCAT+GGG 0.472046 6_4:+79684297 Msa0998590:CDS
GTTGTTAAACCTGAATTGAC+TGG 0.473795 6_4:+79684289 Msa0998590:CDS
GTCCAATCTCAAATTACAGC+TGG 0.474978 6_4:+79688185 Msa0998590:three_prime_UTR
TCCAGTTTAACAGGAGCAGC+TGG 0.478799 6_4:-79687960 None:intergenic
GAAGGCTAGCACAGAGAGAT+GGG 0.479083 6_4:+79687905 Msa0998590:CDS
TCAATTCAGGTTTAACAACT+TGG 0.481650 6_4:-79684285 None:intergenic
CCATTGTATTCATTGGTGGA+GGG 0.481765 6_4:-79687136 None:intergenic
TTCTATCTCGGTCTTGGACA+CGG 0.483446 6_4:+79684797 Msa0998590:CDS
TGGTCTTCTATCGGCAGGAT+TGG 0.484707 6_4:+79687806 Msa0998590:CDS
GACTTACATTAGTAAGAGGT+TGG 0.486299 6_4:-79682587 None:intergenic
TGGAATTAAAGGGGTGGCAA+GGG 0.487405 6_4:+79684560 Msa0998590:CDS
GATGTTAGCTTGGGAGGTCC+CGG 0.488645 6_4:+79682554 Msa0998590:CDS
AAAACCAGAGCTATGCTTGA+AGG 0.490777 6_4:+79682012 Msa0998590:CDS
GGAAGGCTAGCACAGAGAGA+TGG 0.492039 6_4:+79687904 Msa0998590:CDS
ACATTAATTTCAAATTATCT+CGG 0.493171 6_4:-79688145 None:intergenic
GGATCACTTAAATGGTTGCT+TGG 0.495675 6_4:+79682048 Msa0998590:CDS
GTTGATGAAGAAGTATCTGT+TGG 0.496350 6_4:+79683304 Msa0998590:CDS
CTTGAAGGTCTAGTAAAAGA+TGG 0.497778 6_4:+79682027 Msa0998590:CDS
TGTTCCATTGTATTCATTGG+TGG 0.498386 6_4:-79687140 None:intergenic
CGAACAACTAGGTTTGCAAC+TGG 0.499415 6_4:-79682153 None:intergenic
CAAAACCCAGAAGACTTCAA+TGG 0.500067 6_4:-79686489 None:intergenic
AACGACTTTGTTGGAAAGAG+TGG 0.500119 6_4:+79684905 Msa0998590:CDS
AGAGGTTGGCTAGTGGCAGC+CGG 0.500509 6_4:-79682573 None:intergenic
CATATGACATGATGTTAGCT+TGG 0.501629 6_4:+79682544 Msa0998590:CDS
TGGCAAGGGACGAAGCACTT+TGG 0.504419 6_4:+79684574 Msa0998590:CDS
TTGGAATTAAAGGGGTGGCA+AGG 0.508940 6_4:+79684559 Msa0998590:CDS
ATCCAAGATATCAGTTCTCT+GGG 0.510801 6_4:+79684630 Msa0998590:CDS
GCATTTGGTCTTCTATCGGC+AGG 0.511436 6_4:+79687801 Msa0998590:CDS
GACCATCCGTCATAAGTTAG+TGG 0.513575 6_4:+79688122 Msa0998590:three_prime_UTR
ACAAAGAATCTCCCTGATGA+TGG 0.518431 6_4:-79684514 None:intergenic
CTACTACTATCTTGTCAAGA+TGG 0.520468 6_4:-79681963 None:intergenic
TCAGGAAATTCCAGTACAGC+TGG 0.522424 6_4:-79684456 None:intergenic
CAAACAGCTCTGTTGAGAGC+AGG 0.524548 6_4:+79684853 Msa0998590:CDS
TCTGTGCTAGCCTTCCTTGG+AGG 0.525283 6_4:-79687897 None:intergenic
TCGGCACAGGCAACAGTTGA+CGG 0.527785 6_4:+79684963 Msa0998590:CDS
TTGCGCATCTACGAACAACT+AGG 0.530591 6_4:-79682164 None:intergenic
TGAAATGTAAAACTCAAAAG+TGG 0.533824 6_4:+79688241 Msa0998590:three_prime_UTR
AGCTGTAATTTGAGATTGGA+CGG 0.534103 6_4:-79688183 None:intergenic
CGAGCATGTCCTTTAAGCTC+AGG 0.535278 6_4:-79684474 None:intergenic
TAAACTGGAAAGAGATAAAG+AGG 0.536448 6_4:+79687974 Msa0998590:CDS
GCTGAACAATTCATACAAGA+TGG 0.539851 6_4:+79687194 Msa0998590:CDS
GAGGTTGGCTAGTGGCAGCC+GGG 0.542201 6_4:-79682572 None:intergenic
TAATCAGGCAACGGAGAAGA+TGG 0.542683 6_4:+79687779 Msa0998590:intron
ATAAATTGCAGGGGTTGGGT+TGG 0.544186 6_4:+79687014 Msa0998590:intron
AAGTGGAATGTATTCTATCT+CGG 0.547591 6_4:+79684785 Msa0998590:CDS
TTAGTAGAGATGGCTACAGC+TGG 0.548329 6_4:+79681988 Msa0998590:exon
ATAATGACGTTGGCAATGAT+GGG 0.549033 6_4:-79683361 None:intergenic
AAGCAAGTTTGGAATTAAAG+GGG 0.553275 6_4:+79684551 Msa0998590:CDS
GATGGCATTTGGTCTTCTAT+CGG 0.556172 6_4:+79687797 Msa0998590:CDS
CTCCTGAAGATCACTTGAAG+AGG 0.557415 6_4:-79682379 None:intergenic
TCAAGTTTGACATATTTACA+AGG 0.559709 6_4:-79684728 None:intergenic
AGAGGAGATTTAGAGAATGG+TGG 0.560146 6_4:+79687928 Msa0998590:CDS
GTTGAGAGCAGGATTGCTGT+TGG 0.560534 6_4:+79684864 Msa0998590:CDS
TGGAAAATTCACCTTCTGCT+GGG 0.563234 6_4:+79682106 Msa0998590:CDS
ATTCCTACATGCTCAAGGAC+CGG 0.566317 6_4:-79683901 None:intergenic
ATCTACTTGATAAAACGTTC+CGG 0.566860 6_4:+79682514 Msa0998590:CDS
ATATGACATGATGTTAGCTT+GGG 0.567307 6_4:+79682545 Msa0998590:CDS
TTGGCAATGATGGGAACTGC+AGG 0.568955 6_4:-79683352 None:intergenic
GTAGGAATATCCACATGGCC+TGG 0.573088 6_4:+79683916 Msa0998590:CDS
AAGTTCCTTGCATATCGTGA+TGG 0.574505 6_4:-79682438 None:intergenic
CAGAGAACTGATATCTTGGA+TGG 0.575106 6_4:-79684628 None:intergenic
CTCTTCAAGTGATCTTCAGG+AGG 0.577246 6_4:+79682380 Msa0998590:CDS
AACCTGAATTGACTGGACCA+TGG 0.583982 6_4:+79684296 Msa0998590:CDS
GGGTTGGGTTGGCTATGCAG+TGG 0.591986 6_4:+79687025 Msa0998590:CDS
ACAAAGTTCTTCCCAGCAGA+AGG 0.593230 6_4:-79682117 None:intergenic
TCTAATATCAAGTCTCCACC+TGG 0.593455 6_4:-79684702 None:intergenic
TGGAACAGTCACCACACAGC+CGG 0.595260 6_4:+79683882 Msa0998590:CDS
GGCCACTAACTTATGACGGA+TGG 0.596520 6_4:-79688124 None:intergenic
AACTTGAGAGAGTCAGATCA+CGG 0.596621 6_4:+79684744 Msa0998590:CDS
CATGATTCCAAGCCTGCAAG+TGG 0.597092 6_4:+79684768 Msa0998590:CDS
TATCATATATGGGGAACTGA+AGG 0.598527 6_4:-79683429 None:intergenic
TGACATGATGTTAGCTTGGG+AGG 0.598927 6_4:+79682548 Msa0998590:CDS
TCCAATCTCAAATTACAGCT+GGG 0.600168 6_4:+79688186 Msa0998590:three_prime_UTR
CCCATATATGATAAGTACCT+CGG 0.600511 6_4:+79683439 Msa0998590:CDS
AAGGGACGAAGCACTTTGGA+AGG 0.601543 6_4:+79684578 Msa0998590:CDS
AATGTATGCACCTCCAAGGA+AGG 0.601581 6_4:+79687887 Msa0998590:CDS
AAAACTCAAAAGTGGAAGCA+AGG 0.602033 6_4:+79688249 Msa0998590:three_prime_UTR
TAGTTGATCTCATAGCAGAA+AGG 0.602982 6_4:-79683834 None:intergenic
AGAATCCATCACGATATGCA+AGG 0.603071 6_4:+79682433 Msa0998590:CDS
CAAGTTTGACATATTTACAA+GGG 0.603611 6_4:-79684727 None:intergenic
GTGCTTACTTTGTCAACTGG+TGG 0.612242 6_4:+79683403 Msa0998590:CDS
TGGATATTCCTACATGCTCA+AGG 0.612749 6_4:-79683906 None:intergenic
CAGCCGGTCCTTGAGCATGT+AGG 0.618537 6_4:+79683898 Msa0998590:CDS
TCTCGGCCACTAACTTATGA+CGG 0.619841 6_4:-79688128 None:intergenic
GCTGTTGGTGAAATAACTGT+TGG 0.620558 6_4:+79684879 Msa0998590:CDS
GAAGAGAATCATTCAATACA+GGG 0.622388 6_4:-79684653 None:intergenic
AGGAGAACTATGTATTTCGT+AGG 0.622812 6_4:-79687843 None:intergenic
CATATATGGGGAACTGAAGG+CGG 0.623373 6_4:-79683426 None:intergenic
TTACAATGTATGCACCTCCA+AGG 0.624545 6_4:+79687883 Msa0998590:CDS
TCTTCGGTTACATCATCTGG+AGG 0.633222 6_4:+79686517 Msa0998590:CDS
TCTTCAAGTGATCTTCAGGA+GGG 0.637944 6_4:+79682381 Msa0998590:CDS
CTAGCACAGAGAGATGGGAG+AGG 0.640638 6_4:+79687910 Msa0998590:CDS
CACTTCCTAAGTTCATCTAG+AGG 0.640974 6_4:-79686438 None:intergenic
ATGCTCAAGGACCGGCTGTG+TGG 0.641804 6_4:-79683893 None:intergenic
ACTTGAGAGAGTCAGATCAC+GGG 0.642880 6_4:+79684745 Msa0998590:CDS
CGAGGTACTTATCATATATG+GGG 0.642966 6_4:-79683438 None:intergenic
TCAGGAGGGCTTCAATCTAG+AGG 0.643264 6_4:+79682395 Msa0998590:CDS
TATATGATAAGTACCTCGGT+GGG 0.646491 6_4:+79683443 Msa0998590:CDS
CAAGTTTGGAATTAAAGGGG+TGG 0.647570 6_4:+79684554 Msa0998590:CDS
ATTAGTAAGAGGTTGGCTAG+TGG 0.650792 6_4:-79682580 None:intergenic
CCCTCCACCAATGAATACAA+TGG 0.653240 6_4:+79687136 Msa0998590:CDS
TAAATATGTTCAAGAACACA+AGG 0.659741 6_4:-79687863 None:intergenic
TCATGTCATATGTCAAACGC+CGG 0.670260 6_4:-79682533 None:intergenic
TTATGTGATCAGCTTCCAGG+TGG 0.671882 6_4:+79684687 Msa0998590:CDS
AAAGCGCTTACCAGGCCATG+TGG 0.685430 6_4:-79683926 None:intergenic
ATATATGATAAGTACCTCGG+TGG 0.687429 6_4:+79683442 Msa0998590:CDS
CCTGAATTGACTGGACCATG+GGG 0.698696 6_4:+79684298 Msa0998590:CDS
GGCACAGGCAACAGTTGACG+GGG 0.699795 6_4:+79684965 Msa0998590:CDS
TCTGCTATGAGATCAACTAG+AGG 0.704366 6_4:+79683838 Msa0998590:CDS
AGCATGTAGGAATATCCACA+TGG 0.716200 6_4:+79683911 Msa0998590:CDS
GGTCGAGATTTGTAACTGTG+TGG 0.730061 6_4:-79688103 None:intergenic
TTATTGGCTAGCCATCATCA+GGG 0.755162 6_4:+79684503 Msa0998590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTTTATTTAAAAAA+TGG - chr6_4:79680112-79680131 None:intergenic 0.0%
!! TAATCTAAAAATAAACATAA+AGG + chr6_4:79683086-79683105 Msa0998590:intron 10.0%
!! TAAAAATATAGATAATCATA+AGG - chr6_4:79683213-79683232 None:intergenic 10.0%
!!! AGTTTTTGAATATATATTTT+TGG - chr6_4:79686079-79686098 None:intergenic 10.0%
!! AAATGAGATAAATAATTTAA+GGG + chr6_4:79686597-79686616 Msa0998590:intron 10.0%
!!! TAAAAAATAAAAGTACAAAT+TGG - chr6_4:79687652-79687671 None:intergenic 10.0%
!!! TGTTATTTTGATTTGAATTT+TGG + chr6_4:79680365-79680384 Msa0998590:intron 15.0%
!!! TAAAGATGAAATTTTTATGT+CGG + chr6_4:79680428-79680447 Msa0998590:intron 15.0%
!!! ACATTTTCCTAAATTATTAT+CGG - chr6_4:79680708-79680727 None:intergenic 15.0%
!!! TATGATTTAGTTTGAATATT+AGG + chr6_4:79682254-79682273 Msa0998590:intron 15.0%
!! ATATTATATATGCATTCTAT+AGG + chr6_4:79683232-79683251 Msa0998590:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - chr6_4:79684013-79684032 None:intergenic 15.0%
!! TTCAATTCTTACATTATTAA+TGG - chr6_4:79685159-79685178 None:intergenic 15.0%
!!! ATGATTTTGAATTATGATTA+TGG + chr6_4:79685337-79685356 Msa0998590:intron 15.0%
!! AAAAGAATAAACAAAATGTT+AGG + chr6_4:79685722-79685741 Msa0998590:intron 15.0%
!! GAAATGAGATAAATAATTTA+AGG + chr6_4:79686596-79686615 Msa0998590:intron 15.0%
!! AATGAGATAAATAATTTAAG+GGG + chr6_4:79686598-79686617 Msa0998590:intron 15.0%
!! ATAATCTTATTATAAATTGC+AGG + chr6_4:79687003-79687022 Msa0998590:intron 15.0%
!! TAATCTTATTATAAATTGCA+GGG + chr6_4:79687004-79687023 Msa0998590:intron 15.0%
!! TAAAACCAAAATGAAATATA+TGG - chr6_4:79687359-79687378 None:intergenic 15.0%
!!! CTGTAAAACTTTTTTTTATA+GGG - chr6_4:79687384-79687403 None:intergenic 15.0%
!!! ACTGTAAAACTTTTTTTTAT+AGG - chr6_4:79687385-79687404 None:intergenic 15.0%
!!! AAAAATTGAAATTTTGCTTT+TGG + chr6_4:79687410-79687429 Msa0998590:intron 15.0%
!!! TTTAATTAATGTCGTATTTT+AGG - chr6_4:79687530-79687549 None:intergenic 15.0%
!! CTAATTTAAAAATTTGATAG+TGG - chr6_4:79687619-79687638 None:intergenic 15.0%
!!! CTTTTATTTTTTAAGAAGTT+TGG + chr6_4:79687659-79687678 Msa0998590:intron 15.0%
!! ACATTAATTTCAAATTATCT+CGG - chr6_4:79688148-79688167 None:intergenic 15.0%
!!! GATTTTTTTCTTCTTTTTCT+GGG - chr6_4:79680154-79680173 None:intergenic 20.0%
!!! TGATTTTTTTCTTCTTTTTC+TGG - chr6_4:79680155-79680174 None:intergenic 20.0%
!! AAAGTATGAAATTAGAGAAA+TGG - chr6_4:79680269-79680288 None:intergenic 20.0%
!! AAATTTCATCTTTAGCAAAT+GGG - chr6_4:79680422-79680441 None:intergenic 20.0%
!! AAAATTTCATCTTTAGCAAA+TGG - chr6_4:79680423-79680442 None:intergenic 20.0%
!!! TGTTTTCTTTTGTAGATTAA+TGG + chr6_4:79680852-79680871 Msa0998590:intron 20.0%
!!! AATTTTGTAGAACTTTTGAA+AGG + chr6_4:79680897-79680916 Msa0998590:intron 20.0%
!! TTTGAGAAAAATTGGATATT+AGG + chr6_4:79681929-79681948 Msa0998590:five_prime_UTR 20.0%
!! GTTGACGTTTAAAAAAATAA+AGG + chr6_4:79683050-79683069 Msa0998590:intron 20.0%
!!! CTTGATTTAAAGTTTTAAAG+AGG - chr6_4:79683113-79683132 None:intergenic 20.0%
!! ATATGGCAATAAATATGAAA+AGG - chr6_4:79683161-79683180 None:intergenic 20.0%
!! ATATAGATAATCATAAGGAT+AGG - chr6_4:79683208-79683227 None:intergenic 20.0%
!!! TATTTGTGAAAATCTTTTTG+AGG + chr6_4:79683381-79683400 Msa0998590:CDS 20.0%
!! GAAAGTAGTAACATATTTAA+AGG - chr6_4:79683490-79683509 None:intergenic 20.0%
!!! ATAAAGTACAAAAGTATTCT+TGG - chr6_4:79683629-79683648 None:intergenic 20.0%
!! TTTATAATTGAGAACTTCAA+AGG + chr6_4:79683644-79683663 Msa0998590:intron 20.0%
!!! TTTCATTTTTTTTATTGCTC+TGG - chr6_4:79683794-79683813 None:intergenic 20.0%
!! GAATATATATTTGAGAAAGA+TGG - chr6_4:79683969-79683988 None:intergenic 20.0%
!! CAATTATAAAAAAGTCGTAT+CGG + chr6_4:79684944-79684963 Msa0998590:CDS 20.0%
!! AAAGTAATTGAATGTAAACA+TGG + chr6_4:79685181-79685200 Msa0998590:intron 20.0%
!! AAGTAATTGAATGTAAACAT+GGG + chr6_4:79685182-79685201 Msa0998590:intron 20.0%
!! TATCTTCTAATAAAACTCTT+AGG + chr6_4:79685508-79685527 Msa0998590:intron 20.0%
!! TAAAAAGAGTTTATAACGAA+GGG - chr6_4:79685588-79685607 None:intergenic 20.0%
!! ATTGCTTAAGAAACTATTTA+AGG - chr6_4:79686030-79686049 None:intergenic 20.0%
!! AAATGAATCATGTACAATAT+TGG - chr6_4:79686305-79686324 None:intergenic 20.0%
!! TAATTTAAGGGGAAAAATTA+TGG + chr6_4:79686609-79686628 Msa0998590:intron 20.0%
!! AATCTTATTATAAATTGCAG+GGG + chr6_4:79687005-79687024 Msa0998590:intron 20.0%
!!! AGCAAAATTTCAATTTTTCA+AGG - chr6_4:79687408-79687427 None:intergenic 20.0%
!! TTTCAAACATTCCTATATAT+GGG - chr6_4:79688226-79688245 None:intergenic 20.0%
!! ATTTCAAACATTCCTATATA+TGG - chr6_4:79688227-79688246 None:intergenic 20.0%
!!! AATTTTTATGTCGGTTTTGT+AGG + chr6_4:79680437-79680456 Msa0998590:intron 25.0%
! ACAAAAGAAAACATACACAA+GGG - chr6_4:79680845-79680864 None:intergenic 25.0%
! TACAAAAGAAAACATACACA+AGG - chr6_4:79680846-79680865 None:intergenic 25.0%
! TATTACCAATATCTACATGT+TGG - chr6_4:79680993-79681012 None:intergenic 25.0%
!! ATATTTGCTTTGTGGATTAA+TGG + chr6_4:79681132-79681151 Msa0998590:intron 25.0%
! ACAAGAGTTCTACAAAATTT+AGG - chr6_4:79681178-79681197 None:intergenic 25.0%
! TTGTAACATTGCATAACAAT+TGG - chr6_4:79681261-79681280 None:intergenic 25.0%
! AAAATTGCAAACATGCATAA+GGG - chr6_4:79681423-79681442 None:intergenic 25.0%
!!! TTTGCAATTTTGTGGATTAA+TGG + chr6_4:79681432-79681451 Msa0998590:intron 25.0%
! AATTCAGGATTTACAAGAAA+AGG - chr6_4:79681462-79681481 None:intergenic 25.0%
! GAAATTGTTAGAAATGTTTG+TGG + chr6_4:79681506-79681525 Msa0998590:intron 25.0%
! TGTTTAAATTCCAATAGGTT+AGG - chr6_4:79681743-79681762 None:intergenic 25.0%
!! AGGTTTGTTTAAATTCCAAT+AGG - chr6_4:79681748-79681767 None:intergenic 25.0%
! AATCACAAATTGTGAAATAG+AGG - chr6_4:79681768-79681787 None:intergenic 25.0%
! GAGATCATTAATCTATGATT+CGG + chr6_4:79681809-79681828 Msa0998590:intron 25.0%
! TAAAAGATGGATCACTTAAA+TGG + chr6_4:79682040-79682059 Msa0998590:CDS 25.0%
!!! TTATTTTGCTGAAGAATTTG+AGG + chr6_4:79682080-79682099 Msa0998590:CDS 25.0%
!!! ACATTGTCGGATTTTTTTAT+TGG + chr6_4:79682312-79682331 Msa0998590:intron 25.0%
! ACTTGTACCAATAACAAAAA+AGG - chr6_4:79682660-79682679 None:intergenic 25.0%
!!! GTTGTTGTTTAGAAAGATAA+AGG - chr6_4:79682843-79682862 None:intergenic 25.0%
! AAAGCTTCTCTTTCATTAAT+AGG - chr6_4:79682984-79683003 None:intergenic 25.0%
! CATGCTATATCTATTTGATA+TGG - chr6_4:79683178-79683197 None:intergenic 25.0%
! AATGAACCTTTATGTTTAGA+AGG + chr6_4:79683282-79683301 Msa0998590:intron 25.0%
!! ATTTTCACAAATAATGACGT+TGG - chr6_4:79683374-79683393 None:intergenic 25.0%
! AGTAACATATTTAAAGGTAG+AGG - chr6_4:79683484-79683503 None:intergenic 25.0%
!! TAAAATTTTGCCCTCTAATA+TGG + chr6_4:79683574-79683593 Msa0998590:intron 25.0%
!! AAAATTTTGCCCTCTAATAT+GGG + chr6_4:79683575-79683594 Msa0998590:intron 25.0%
! TTATTATTGTGATTAGCGAT+AGG + chr6_4:79683733-79683752 Msa0998590:intron 25.0%
!! TCTGCTAAATCATATCTTTT+TGG - chr6_4:79684256-79684275 None:intergenic 25.0%
! CACAAATTTATAAGCAAGTT+TGG + chr6_4:79684540-79684559 Msa0998590:CDS 25.0%
!! ATAAGCAAGTTTGGAATTAA+AGG + chr6_4:79684549-79684568 Msa0998590:CDS 25.0%
!! TAAGCAAGTTTGGAATTAAA+GGG + chr6_4:79684550-79684569 Msa0998590:CDS 25.0%
! CAAGTTTGACATATTTACAA+GGG - chr6_4:79684730-79684749 None:intergenic 25.0%
! TCAAGTTTGACATATTTACA+AGG - chr6_4:79684731-79684750 None:intergenic 25.0%
! TCCTTTGTCATAAAAAAATC+CGG - chr6_4:79685301-79685320 None:intergenic 25.0%
!!! GATTTTTTTATGACAAAGGA+GGG + chr6_4:79685301-79685320 Msa0998590:intron 25.0%
! TTATGGTTTGATATGATTGA+AGG + chr6_4:79685354-79685373 Msa0998590:intron 25.0%
! GTCTTGAGTTAGTATAAATA+AGG - chr6_4:79685419-79685438 None:intergenic 25.0%
! CTAAAAAGAGTTTATAACGA+AGG - chr6_4:79685589-79685608 None:intergenic 25.0%
!! CTTCGTTATAAACTCTTTTT+AGG + chr6_4:79685587-79685606 Msa0998590:intron 25.0%
! TGTCACATTAAAAATGGATA+AGG - chr6_4:79685613-79685632 None:intergenic 25.0%
!!! ATCCATTTTTAATGTGACAA+CGG + chr6_4:79685614-79685633 Msa0998590:intron 25.0%
! TTAATTCCATCATATGAGTT+AGG - chr6_4:79685704-79685723 None:intergenic 25.0%
!!! CATTTTAGAATTTGGACTTT+AGG - chr6_4:79686203-79686222 None:intergenic 25.0%
!! CTAAAGTCCAAATTCTAAAA+TGG + chr6_4:79686201-79686220 Msa0998590:intron 25.0%
!!! TCCAAATTCTAAAATGGTAT+CGG + chr6_4:79686207-79686226 Msa0998590:intron 25.0%
! AAAGTAGTTCCTGAAAAATA+GGG - chr6_4:79686416-79686435 None:intergenic 25.0%
! TAAAGTAGTTCCTGAAAAAT+AGG - chr6_4:79686417-79686436 None:intergenic 25.0%
! TCTTCAATCTTTGCTAAATT+GGG + chr6_4:79686461-79686480 Msa0998590:CDS 25.0%
! CTATAGCAATTTCAAATAAC+AGG - chr6_4:79686577-79686596 None:intergenic 25.0%
!!! ATTACCAGATGTTTTAATCA+AGG + chr6_4:79687083-79687102 Msa0998590:CDS 25.0%
! GATTCGTAAAAATAGCAAAA+GGG - chr6_4:79687285-79687304 None:intergenic 25.0%
! TGATTCGTAAAAATAGCAAA+AGG - chr6_4:79687286-79687305 None:intergenic 25.0%
!! TCTTGCCATATATTTCATTT+TGG + chr6_4:79687351-79687370 Msa0998590:intron 25.0%
! GTTCATGTAAATGTAACATT+TGG + chr6_4:79687452-79687471 Msa0998590:intron 25.0%
! AACACGATTCAAATATTACA+GGG + chr6_4:79687572-79687591 Msa0998590:intron 25.0%
!! TAAAAGTACAAATTGGCAAA+AGG - chr6_4:79687645-79687664 None:intergenic 25.0%
! TAAATATGTTCAAGAACACA+AGG - chr6_4:79687866-79687885 None:intergenic 25.0%
! TGAAATGTAAAACTCAAAAG+TGG + chr6_4:79688241-79688260 Msa0998590:three_prime_UTR 25.0%
!! CTTTTTCTGGGAAAATACAT+TGG - chr6_4:79680142-79680161 None:intergenic 30.0%
TGTGAAAAAGGTAACAACTT+TGG + chr6_4:79680218-79680237 Msa0998590:intron 30.0%
!! ATGGATTTGATTTGTGAAGA+GGG - chr6_4:79680250-79680269 None:intergenic 30.0%
!! AATGGATTTGATTTGTGAAG+AGG - chr6_4:79680251-79680270 None:intergenic 30.0%
! TTTGCTTTGTTATGCATGTT+TGG + chr6_4:79680474-79680493 Msa0998590:intron 30.0%
! TTGCTTTGTTATGCATGTTT+GGG + chr6_4:79680475-79680494 Msa0998590:intron 30.0%
ACAGACACCGATAATAATTT+AGG + chr6_4:79680698-79680717 Msa0998590:intron 30.0%
CATACATGTCAATATTGTGT+CGG + chr6_4:79680741-79680760 Msa0998590:intron 30.0%
GAAGTTGTTTGAATTGTTTG+TGG + chr6_4:79681212-79681231 Msa0998590:intron 30.0%
AACACTTCAGATTGAATTGA+AGG - chr6_4:79681382-79681401 None:intergenic 30.0%
! TTCAATTCAATCTGAAGTGT+TGG + chr6_4:79681381-79681400 Msa0998590:intron 30.0%
CAAAATTGCAAACATGCATA+AGG - chr6_4:79681424-79681443 None:intergenic 30.0%
! TATGCATGTTTGCAATTTTG+TGG + chr6_4:79681424-79681443 Msa0998590:intron 30.0%
! AATTTTGTAGAACGCTTGAA+GGG + chr6_4:79681478-79681497 Msa0998590:intron 30.0%
CTATTAGTGTTATAGTGTAG+TGG + chr6_4:79681589-79681608 Msa0998590:intron 30.0%
!!! TTGATGATGATCTAGTTTTG+AGG + chr6_4:79681835-79681854 Msa0998590:intron 30.0%
!!! CTAGTTTTGAGGATTCATAT+TGG + chr6_4:79681846-79681865 Msa0998590:intron 30.0%
TGTACTGAAACATAAAGGTA+AGG - chr6_4:79681900-79681919 None:intergenic 30.0%
TTGCATGTACTGAAACATAA+AGG - chr6_4:79681905-79681924 None:intergenic 30.0%
! GCAAGAACTTTGAGAAAAAT+TGG + chr6_4:79681921-79681940 Msa0998590:five_prime_UTR 30.0%
ATCATACAAGAGTGAAAGTT+TGG - chr6_4:79682240-79682259 None:intergenic 30.0%
AGAACGAAAATACACGTTAA+GGG - chr6_4:79682290-79682309 None:intergenic 30.0%
! ATTTTCGTTCTCTACATTGT+CGG + chr6_4:79682299-79682318 Msa0998590:intron 30.0%
!! ATATCGTGATGGATTCTTTA+GGG - chr6_4:79682430-79682449 None:intergenic 30.0%
ATCTACTTGATAAAACGTTC+CGG + chr6_4:79682514-79682533 Msa0998590:CDS 30.0%
! ATATGACATGATGTTAGCTT+GGG + chr6_4:79682545-79682564 Msa0998590:CDS 30.0%
GAAAGACTTACATTAGTAAG+AGG - chr6_4:79682594-79682613 None:intergenic 30.0%
! AACAAAAAAGGTATGAGGTA+AGG - chr6_4:79682648-79682667 None:intergenic 30.0%
! CCAATAACAAAAAAGGTATG+AGG - chr6_4:79682653-79682672 None:intergenic 30.0%
!!! CCTCATACCTTTTTTGTTAT+TGG + chr6_4:79682650-79682669 Msa0998590:intron 30.0%
CATCAACCTTCTAAACATAA+AGG - chr6_4:79683291-79683310 None:intergenic 30.0%
ATTACTGAATTCCAGACAAA+GGG - chr6_4:79683513-79683532 None:intergenic 30.0%
TATTACTGAATTCCAGACAA+AGG - chr6_4:79683514-79683533 None:intergenic 30.0%
! TTTGTCTGGAATTCAGTAAT+AGG + chr6_4:79683513-79683532 Msa0998590:intron 30.0%
! ATTAGAGGGCAAAATTTTAG+AGG - chr6_4:79683573-79683592 None:intergenic 30.0%
! AATTATTATCGGTGTTTACG+TGG - chr6_4:79684002-79684021 None:intergenic 30.0%
TCAACAAGTATGTAGTATGT+AGG - chr6_4:79684104-79684123 None:intergenic 30.0%
! TCAATTCAGGTTTAACAACT+TGG - chr6_4:79684288-79684307 None:intergenic 30.0%
TAACTGTGCAATTACTTACA+AGG - chr6_4:79684365-79684384 None:intergenic 30.0%
! AAGCAAGTTTGGAATTAAAG+GGG + chr6_4:79684551-79684570 Msa0998590:CDS 30.0%
GAAGAGAATCATTCAATACA+GGG - chr6_4:79684656-79684675 None:intergenic 30.0%
AGAAGAGAATCATTCAATAC+AGG - chr6_4:79684657-79684676 None:intergenic 30.0%
AAGTGGAATGTATTCTATCT+CGG + chr6_4:79684785-79684804 Msa0998590:CDS 30.0%
TCTAACTTAGGATTCGTATT+TGG + chr6_4:79684822-79684841 Msa0998590:CDS 30.0%
TAAGAAACACATGAAGTTTC+CGG + chr6_4:79685279-79685298 Msa0998590:intron 30.0%
!!! TCCGGATTTTTTTATGACAA+AGG + chr6_4:79685297-79685316 Msa0998590:intron 30.0%
!!! GGATTTTTTTATGACAAAGG+AGG + chr6_4:79685300-79685319 Msa0998590:intron 30.0%
! TCTTACCAGACTAACTTTTA+AGG + chr6_4:79685553-79685572 Msa0998590:intron 30.0%
TTTATGCCTAACTCATATGA+TGG + chr6_4:79685695-79685714 Msa0998590:intron 30.0%
AATTGAAATGTGAAGTGTGA+AGG + chr6_4:79685759-79685778 Msa0998590:intron 30.0%
AGAAATAACAACTACCTTCA+AGG + chr6_4:79685824-79685843 Msa0998590:intron 30.0%
TTAGATGAAATAGATACGAG+CGG + chr6_4:79685940-79685959 Msa0998590:intron 30.0%
ATGGATCAAATAACCAAGAT+GGG + chr6_4:79685966-79685985 Msa0998590:intron 30.0%
!!! ACCGATACCATTTTAGAATT+TGG - chr6_4:79686211-79686230 None:intergenic 30.0%
AAGTTATAAATGAGCACCTA+TGG + chr6_4:79686245-79686264 Msa0998590:intron 30.0%
TGAATCATGTACAATATTGG+TGG - chr6_4:79686302-79686321 None:intergenic 30.0%
! AGAGTTTTCTGTTCTGATTT+TGG - chr6_4:79686345-79686364 None:intergenic 30.0%
GCATGCATTAAAGACAAAAT+AGG - chr6_4:79686387-79686406 None:intergenic 30.0%
AAGTAGTTCCTGAAAAATAG+GGG - chr6_4:79686415-79686434 None:intergenic 30.0%
TTTATCCTCTAGATGAACTT+AGG + chr6_4:79686433-79686452 Msa0998590:CDS 30.0%
GTCTTCAATCTTTGCTAAAT+TGG + chr6_4:79686460-79686479 Msa0998590:CDS 30.0%
TTAAGGGGAAAAATTATGGA+TGG + chr6_4:79686613-79686632 Msa0998590:intron 30.0%
TAACCAAACAAGACCATAAT+CGG - chr6_4:79686689-79686708 None:intergenic 30.0%
! ATTTTCATAAGTTCTCCTAG+AGG + chr6_4:79686820-79686839 Msa0998590:intron 30.0%
! TTTTCATAAGTTCTCCTAGA+GGG + chr6_4:79686821-79686840 Msa0998590:intron 30.0%
TGACAAAAATTGGCTGAAAA+CGG + chr6_4:79686845-79686864 Msa0998590:intron 30.0%
TTATTATAAATTGCAGGGGT+TGG + chr6_4:79687009-79687028 Msa0998590:intron 30.0%
TATTATAAATTGCAGGGGTT+GGG + chr6_4:79687010-79687029 Msa0998590:intron 30.0%
AGTTGTTCCATTGTATTCAT+TGG - chr6_4:79687146-79687165 None:intergenic 30.0%
ATATTTCTTCTCAAGTTTCG+TGG + chr6_4:79687221-79687240 Msa0998590:CDS 30.0%
AGAAAATACCTGAGGAAAAA+TGG - chr6_4:79687258-79687277 None:intergenic 30.0%
!! TGTCGTATTTTAGGAACTAA+AGG - chr6_4:79687521-79687540 None:intergenic 30.0%
CAACACGATTCAAATATTAC+AGG + chr6_4:79687571-79687590 Msa0998590:intron 30.0%
ACACGATTCAAATATTACAG+GGG + chr6_4:79687573-79687592 Msa0998590:intron 30.0%
TACTACCTTGTTCCTTTATA+TGG + chr6_4:79687756-79687775 Msa0998590:intron 30.0%
GATTACCATATAAAGGAACA+AGG - chr6_4:79687764-79687783 None:intergenic 30.0%
TGTTCCTTTATATGGTAATC+AGG + chr6_4:79687764-79687783 Msa0998590:intron 30.0%
TTTATATGGTAATCAGGCAA+CGG + chr6_4:79687770-79687789 Msa0998590:intron 30.0%
TTATCTCTTTCCAGTTTAAC+AGG - chr6_4:79687972-79687991 None:intergenic 30.0%
TAAACTGGAAAGAGATAAAG+AGG + chr6_4:79687974-79687993 Msa0998590:CDS 30.0%
ACAAGAAGAAAAAGTGATGA+TGG + chr6_4:79687997-79688016 Msa0998590:exon 30.0%
!!! TTTTATGTCGGTTTTGTAGG+TGG + chr6_4:79680440-79680459 Msa0998590:intron 35.0%
!!! TTTATGTCGGTTTTGTAGGT+GGG + chr6_4:79680441-79680460 Msa0998590:intron 35.0%
CGACACAATATTGACATGTA+TGG - chr6_4:79680743-79680762 None:intergenic 35.0%
AAATGAACACCAGCACATAT+TGG + chr6_4:79680769-79680788 Msa0998590:intron 35.0%
TGACACCAACATGTAGATAT+TGG + chr6_4:79680985-79681004 Msa0998590:intron 35.0%
ATACCTTCAAGCTTAAGTGT+TGG + chr6_4:79681083-79681102 Msa0998590:intron 35.0%
CACAAAGCAAATATGCACAA+GGG - chr6_4:79681126-79681145 None:intergenic 35.0%
TGTAGAACTCTTGTCTTGAA+AGG + chr6_4:79681184-79681203 Msa0998590:intron 35.0%
TCAAGCGTTCTACAAAATTC+AGG - chr6_4:79681477-79681496 None:intergenic 35.0%
! GAATTTTGTAGAACGCTTGA+AGG + chr6_4:79681477-79681496 Msa0998590:intron 35.0%
TGATGACACAGCATTACAAT+TGG - chr6_4:79681555-79681574 None:intergenic 35.0%
AATGCTGTGTCATCAAATAG+TGG + chr6_4:79681560-79681579 Msa0998590:intron 35.0%
ACAGAACAATAGCTCTTCAA+AGG - chr6_4:79681666-79681685 None:intergenic 35.0%
AGTGATATAGCCTAACCTAT+TGG + chr6_4:79681730-79681749 Msa0998590:intron 35.0%
CTACTACTATCTTGTCAAGA+TGG - chr6_4:79681966-79681985 None:intergenic 35.0%
CATCTTGACAAGATAGTAGT+AGG + chr6_4:79681964-79681983 Msa0998590:five_prime_UTR 35.0%
AGTAGTAGGTTTAGTAGAGA+TGG + chr6_4:79681978-79681997 Msa0998590:exon 35.0%
CTTGAAGGTCTAGTAAAAGA+TGG + chr6_4:79682027-79682046 Msa0998590:CDS 35.0%
GTTTGAATATTAGGTAGCCA+AGG + chr6_4:79682263-79682282 Msa0998590:intron 35.0%
GAGAACGAAAATACACGTTA+AGG - chr6_4:79682291-79682310 None:intergenic 35.0%
!! CATATCGTGATGGATTCTTT+AGG - chr6_4:79682431-79682450 None:intergenic 35.0%
ACGATATGCAAGGAACTTAT+TGG + chr6_4:79682443-79682462 Msa0998590:CDS 35.0%
! TCATTGAAAGCGCAAATATC+CGG + chr6_4:79682489-79682508 Msa0998590:CDS 35.0%
! CGTTTTATCAAGTAGATGAC+CGG - chr6_4:79682511-79682530 None:intergenic 35.0%
CATATGACATGATGTTAGCT+TGG + chr6_4:79682544-79682563 Msa0998590:CDS 35.0%
GACTTACATTAGTAAGAGGT+TGG - chr6_4:79682590-79682609 None:intergenic 35.0%
TTCTTTCTGCACGTATCTAT+TGG + chr6_4:79682733-79682752 Msa0998590:intron 35.0%
ATTAAGCAAAACTGCACTGA+GGG + chr6_4:79682791-79682810 Msa0998590:intron 35.0%
TTTGGATGGAAAATCACTGA+AGG - chr6_4:79682872-79682891 None:intergenic 35.0%
TCTCATTCACAACAATTGGT+GGG - chr6_4:79682932-79682951 None:intergenic 35.0%
!!! GAGAAGCTTTGAGTTTTTCA+CGG + chr6_4:79682994-79683013 Msa0998590:intron 35.0%
!! GTTGATGAAGAAGTATCTGT+TGG + chr6_4:79683304-79683323 Msa0998590:CDS 35.0%
ATAATGACGTTGGCAATGAT+GGG - chr6_4:79683364-79683383 None:intergenic 35.0%
AATAATGACGTTGGCAATGA+TGG - chr6_4:79683365-79683384 None:intergenic 35.0%
TATCATATATGGGGAACTGA+AGG - chr6_4:79683432-79683451 None:intergenic 35.0%
! CGAGGTACTTATCATATATG+GGG - chr6_4:79683441-79683460 None:intergenic 35.0%
! CCGAGGTACTTATCATATAT+GGG - chr6_4:79683442-79683461 None:intergenic 35.0%
CCCATATATGATAAGTACCT+CGG + chr6_4:79683439-79683458 Msa0998590:CDS 35.0%
! ACCGAGGTACTTATCATATA+TGG - chr6_4:79683443-79683462 None:intergenic 35.0%
ATATATGATAAGTACCTCGG+TGG + chr6_4:79683442-79683461 Msa0998590:CDS 35.0%
TATATGATAAGTACCTCGGT+GGG + chr6_4:79683443-79683462 Msa0998590:CDS 35.0%
TTACTGAATTCCAGACAAAG+GGG - chr6_4:79683512-79683531 None:intergenic 35.0%
ATCTGCTTCAGTTTCTGATT+AGG + chr6_4:79683686-79683705 Msa0998590:intron 35.0%
TAGTTGATCTCATAGCAGAA+AGG - chr6_4:79683837-79683856 None:intergenic 35.0%
GAGAAGATTCTTGAGATTGA+TGG + chr6_4:79683862-79683881 Msa0998590:CDS 35.0%
CTTCAAGAATAACCAATGCA+TGG - chr6_4:79684137-79684156 None:intergenic 35.0%
ATGTTACAGAGAGTCACTAA+TGG - chr6_4:79684160-79684179 None:intergenic 35.0%
GTTGTTAAACCTGAATTGAC+TGG + chr6_4:79684289-79684308 Msa0998590:CDS 35.0%
! TTTAGGAATTTTGCGTTTGC+AGG + chr6_4:79684605-79684624 Msa0998590:CDS 35.0%
ATCCAAGATATCAGTTCTCT+GGG + chr6_4:79684630-79684649 Msa0998590:CDS 35.0%
AATTTATGTGATCAGCTTCC+AGG + chr6_4:79684684-79684703 Msa0998590:CDS 35.0%
ATAGAATACATTCCACTTGC+AGG - chr6_4:79684783-79684802 None:intergenic 35.0%
AATGTATTCTATCTCGGTCT+TGG + chr6_4:79684791-79684810 Msa0998590:CDS 35.0%
!! TGATGGTATCGACACTAATT+TGG + chr6_4:79684995-79685014 Msa0998590:CDS 35.0%
GCTTGGCTAAAAGGTAAAAA+CGG - chr6_4:79685047-79685066 None:intergenic 35.0%
! AAAGAAAAAGCGTAAGAGCT+TGG - chr6_4:79685064-79685083 None:intergenic 35.0%
TCTCATTGTTCCTAGATTGA+CGG - chr6_4:79685245-79685264 None:intergenic 35.0%
ATCTAGGAACAATGAGAACA+CGG + chr6_4:79685248-79685267 Msa0998590:intron 35.0%
CTCCGTTGTCACATTAAAAA+TGG - chr6_4:79685619-79685638 None:intergenic 35.0%
! ATAGGCTCTGATACGATATT+AGG + chr6_4:79685666-79685685 Msa0998590:intron 35.0%
AATGTGAAGTGTGAAGGAAA+AGG + chr6_4:79685765-79685784 Msa0998590:intron 35.0%
ATTTACAGCTTGAACCTTGA+AGG - chr6_4:79685841-79685860 None:intergenic 35.0%
TAGATGAAATAGATACGAGC+GGG + chr6_4:79685941-79685960 Msa0998590:intron 35.0%
CATGGATCAAATAACCAAGA+TGG + chr6_4:79685965-79685984 Msa0998590:intron 35.0%
TGGATCAAATAACCAAGATG+GGG + chr6_4:79685967-79685986 Msa0998590:intron 35.0%
TCAGAAGTTGCGTATAAATG+TGG + chr6_4:79686098-79686117 Msa0998590:intron 35.0%
CAGAAGTTGCGTATAAATGT+GGG + chr6_4:79686099-79686118 Msa0998590:intron 35.0%
AGAAGTTGCGTATAAATGTG+GGG + chr6_4:79686100-79686119 Msa0998590:intron 35.0%
CTTAACTCAACCTTAAAAGC+TGG - chr6_4:79686180-79686199 None:intergenic 35.0%
!! ATGGTATCGGTGCATATTAT+AGG + chr6_4:79686220-79686239 Msa0998590:intron 35.0%
ATGATCCATTGAAGTCTTCT+GGG + chr6_4:79686484-79686503 Msa0998590:CDS 35.0%
!!! TCTGGGTTTTGTTTGTTCTT+CGG + chr6_4:79686501-79686520 Msa0998590:CDS 35.0%
!! CAGTTTTAACATGCCGATTA+TGG + chr6_4:79686673-79686692 Msa0998590:intron 35.0%
TCAAATAAGCCGATACAAAC+AGG + chr6_4:79686943-79686962 Msa0998590:intron 35.0%
CATCATAAGCCTGTTTGTAT+CGG - chr6_4:79686955-79686974 None:intergenic 35.0%
CCTACCTTGATTAAAACATC+TGG - chr6_4:79687090-79687109 None:intergenic 35.0%
!!! CCAGATGTTTTAATCAAGGT+AGG + chr6_4:79687087-79687106 Msa0998590:CDS 35.0%
TGTTCCATTGTATTCATTGG+TGG - chr6_4:79687143-79687162 None:intergenic 35.0%
GCTGAACAATTCATACAAGA+TGG + chr6_4:79687194-79687213 Msa0998590:CDS 35.0%
GTTGCCTGATTACCATATAA+AGG - chr6_4:79687771-79687790 None:intergenic 35.0%
AGGAGAACTATGTATTTCGT+AGG - chr6_4:79687846-79687865 None:intergenic 35.0%
! AGCTGTAATTTGAGATTGGA+CGG - chr6_4:79688186-79688205 None:intergenic 35.0%
TCCAATCTCAAATTACAGCT+GGG + chr6_4:79688186-79688205 Msa0998590:three_prime_UTR 35.0%
AAAACTCAAAAGTGGAAGCA+AGG + chr6_4:79688249-79688268 Msa0998590:three_prime_UTR 35.0%
CACACGCAATCATCAATTTC+TGG + chr6_4:79680187-79680206 Msa0998590:five_prime_UTR 40.0%
CTGGATTCTGTCTGTGAAAA+AGG + chr6_4:79680206-79680225 Msa0998590:five_prime_UTR 40.0%
! GGTGTCTGTATCAAAGTATC+TGG - chr6_4:79680687-79680706 None:intergenic 40.0%
TTTGAGTGTCCAATATGTGC+TGG - chr6_4:79680781-79680800 None:intergenic 40.0%
! GCACTGACACTTCAAATTGA+TGG - chr6_4:79680808-79680827 None:intergenic 40.0%
CCACAAAGCAAATATGCACA+AGG - chr6_4:79681127-79681146 None:intergenic 40.0%
CCTTGTGCATATTTGCTTTG+TGG + chr6_4:79681124-79681143 Msa0998590:intron 40.0%
TAGCACTACAACTAGAAGTG+AGG + chr6_4:79681291-79681310 Msa0998590:intron 40.0%
TTTGTGATTGACACCACTGT+TGG + chr6_4:79681779-79681798 Msa0998590:intron 40.0%
AAAACCAGAGCTATGCTTGA+AGG + chr6_4:79682012-79682031 Msa0998590:CDS 40.0%
GGATCACTTAAATGGTTGCT+TGG + chr6_4:79682048-79682067 Msa0998590:CDS 40.0%
TGCTGAAGAATTTGAGGAGA+TGG + chr6_4:79682086-79682105 Msa0998590:CDS 40.0%
ATGGAAAATTCACCTTCTGC+TGG + chr6_4:79682105-79682124 Msa0998590:CDS 40.0%
TGGAAAATTCACCTTCTGCT+GGG + chr6_4:79682106-79682125 Msa0998590:CDS 40.0%
! GCGCAAAGTAAGTGCATTTT+TGG + chr6_4:79682181-79682200 Msa0998590:intron 40.0%
AAATACACGTTAAGGGTCCT+TGG - chr6_4:79682283-79682302 None:intergenic 40.0%
GATCACTTGAAGAGGTCTTA+AGG - chr6_4:79682374-79682393 None:intergenic 40.0%
TCTTCAAGTGATCTTCAGGA+GGG + chr6_4:79682381-79682400 Msa0998590:CDS 40.0%
AGAATCCATCACGATATGCA+AGG + chr6_4:79682433-79682452 Msa0998590:CDS 40.0%
AAGTTCCTTGCATATCGTGA+TGG - chr6_4:79682441-79682460 None:intergenic 40.0%
TCATGTCATATGTCAAACGC+CGG - chr6_4:79682536-79682555 None:intergenic 40.0%
! ATTAGTAAGAGGTTGGCTAG+TGG - chr6_4:79682583-79682602 None:intergenic 40.0%
! CTCAGTGCAGTTTTGCTTAA+TGG - chr6_4:79682792-79682811 None:intergenic 40.0%
CATTAAGCAAAACTGCACTG+AGG + chr6_4:79682790-79682809 Msa0998590:intron 40.0%
TTAAGCAAAACTGCACTGAG+GGG + chr6_4:79682792-79682811 Msa0998590:intron 40.0%
! GAGATTTTCGCGATTTTGGA+TGG - chr6_4:79682886-79682905 None:intergenic 40.0%
TCCAAAATCGCGAAAATCTC+AGG + chr6_4:79682886-79682905 Msa0998590:intron 40.0%
CCAAAATCGCGAAAATCTCA+GGG + chr6_4:79682887-79682906 Msa0998590:intron 40.0%
CTCTCATTCACAACAATTGG+TGG - chr6_4:79682933-79682952 None:intergenic 40.0%
CACCAATTGTTGTGAATGAG+AGG + chr6_4:79682931-79682950 Msa0998590:intron 40.0%
AGCCTCTCATTCACAACAAT+TGG - chr6_4:79682936-79682955 None:intergenic 40.0%
AAAAGGCAAAACTGCATCAG+AGG - chr6_4:79683144-79683163 None:intergenic 40.0%
!! ATTACTTTTCTATCCCACCG+AGG - chr6_4:79683459-79683478 None:intergenic 40.0%
TTACTACTTTCCCCTTTGTC+TGG + chr6_4:79683499-79683518 Msa0998590:intron 40.0%
TGTAGTGCACCCATATTAGA+GGG - chr6_4:79683587-79683606 None:intergenic 40.0%
TTGTAGTGCACCCATATTAG+AGG - chr6_4:79683588-79683607 None:intergenic 40.0%
TCTGCTATGAGATCAACTAG+AGG + chr6_4:79683838-79683857 Msa0998590:CDS 40.0%
TGGATATTCCTACATGCTCA+AGG - chr6_4:79683909-79683928 None:intergenic 40.0%
AGCATGTAGGAATATCCACA+TGG + chr6_4:79683911-79683930 Msa0998590:CDS 40.0%
!! GTAACTTTAAAGCGCTTACC+AGG - chr6_4:79683937-79683956 None:intergenic 40.0%
CCTTAGATTGAATACGTGTC+TGG - chr6_4:79684069-79684088 None:intergenic 40.0%
CCAGACACGTATTCAATCTA+AGG + chr6_4:79684066-79684085 Msa0998590:intron 40.0%
CTGGAATTTCCTGAGCTTAA+AGG + chr6_4:79684465-79684484 Msa0998590:CDS 40.0%
! ATTATTGGCTAGCCATCATC+AGG + chr6_4:79684502-79684521 Msa0998590:CDS 40.0%
! TTATTGGCTAGCCATCATCA+GGG + chr6_4:79684503-79684522 Msa0998590:CDS 40.0%
ACAAAGAATCTCCCTGATGA+TGG - chr6_4:79684517-79684536 None:intergenic 40.0%
! CAAGTTTGGAATTAAAGGGG+TGG + chr6_4:79684554-79684573 Msa0998590:CDS 40.0%
CAGAGAACTGATATCTTGGA+TGG - chr6_4:79684631-79684650 None:intergenic 40.0%
CATCCAAGATATCAGTTCTC+TGG + chr6_4:79684629-79684648 Msa0998590:CDS 40.0%
TCTAATATCAAGTCTCCACC+TGG - chr6_4:79684705-79684724 None:intergenic 40.0%
AACTTGAGAGAGTCAGATCA+CGG + chr6_4:79684744-79684763 Msa0998590:CDS 40.0%
TTGGACACGGTTTCTAACTT+AGG + chr6_4:79684810-79684829 Msa0998590:CDS 40.0%
! GCTGTTGGTGAAATAACTGT+TGG + chr6_4:79684879-79684898 Msa0998590:CDS 40.0%
TGTTGGAGAAACGACTTTGT+TGG + chr6_4:79684896-79684915 Msa0998590:CDS 40.0%
AACGACTTTGTTGGAAAGAG+TGG + chr6_4:79684905-79684924 Msa0998590:CDS 40.0%
! TAAAAAAGTCGTATCGGCAC+AGG + chr6_4:79684950-79684969 Msa0998590:CDS 40.0%
CACTAATTTGGCTGTCATGA+AGG + chr6_4:79685007-79685026 Msa0998590:CDS 40.0%
TTTGTGTCAATCAGGTGTCT+GGG - chr6_4:79685119-79685138 None:intergenic 40.0%
TCTACGTGTTTGTGTCAATC+AGG - chr6_4:79685127-79685146 None:intergenic 40.0%
AATCTTGGATCCGTCAATCT+AGG + chr6_4:79685232-79685251 Msa0998590:intron 40.0%
TCTAGGAACAATGAGAACAC+GGG + chr6_4:79685249-79685268 Msa0998590:intron 40.0%
!!! CAGACTAACTTTTAAGGCGA+CGG + chr6_4:79685559-79685578 Msa0998590:intron 40.0%
GAAAAGGAAGAACAGAACAC+TGG + chr6_4:79685781-79685800 Msa0998590:intron 40.0%
GTCTCTGTTCTTTGTTCACA+CGG - chr6_4:79685888-79685907 None:intergenic 40.0%
CTCTGGGCATCTGAAAAAAT+CGG + chr6_4:79685915-79685934 Msa0998590:intron 40.0%
TCTGGGCATCTGAAAAAATC+GGG + chr6_4:79685916-79685935 Msa0998590:intron 40.0%
AGATGAAATAGATACGAGCG+GGG + chr6_4:79685942-79685961 Msa0998590:intron 40.0%
GAAGTTGCGTATAAATGTGG+GGG + chr6_4:79686101-79686120 Msa0998590:intron 40.0%
AAGTTGCGTATAAATGTGGG+GGG + chr6_4:79686102-79686121 Msa0998590:intron 40.0%
!! TGCGTTTTCCCCTATTTTTC+AGG + chr6_4:79686404-79686423 Msa0998590:intron 40.0%
CACTTCCTAAGTTCATCTAG+AGG - chr6_4:79686441-79686460 None:intergenic 40.0%
GATGATCCATTGAAGTCTTC+TGG + chr6_4:79686483-79686502 Msa0998590:CDS 40.0%
CAAAACCCAGAAGACTTCAA+TGG - chr6_4:79686492-79686511 None:intergenic 40.0%
TGTTCTTCGGTTACATCATC+TGG + chr6_4:79686514-79686533 Msa0998590:CDS 40.0%
!! ATGCCGATTATGGTCTTGTT+TGG + chr6_4:79686683-79686702 Msa0998590:intron 40.0%
AATTGGCTGAAAACGGCTTA+TGG + chr6_4:79686852-79686871 Msa0998590:intron 40.0%
CATTGTATTCATTGGTGGAG+GGG - chr6_4:79687138-79687157 None:intergenic 40.0%
CCATTGTATTCATTGGTGGA+GGG - chr6_4:79687139-79687158 None:intergenic 40.0%
TCCATTGTATTCATTGGTGG+AGG - chr6_4:79687140-79687159 None:intergenic 40.0%
!! GTTACTCTCCATTTTTCCTC+AGG + chr6_4:79687247-79687266 Msa0998590:CDS 40.0%
AGGGAATGAGAAAATACCTG+AGG - chr6_4:79687266-79687285 None:intergenic 40.0%
GGGCTAAAACAAAGTAGCTA+CGG + chr6_4:79687593-79687612 Msa0998590:intron 40.0%
! GATGGCATTTGGTCTTCTAT+CGG + chr6_4:79687797-79687816 Msa0998590:CDS 40.0%
TTACAATGTATGCACCTCCA+AGG + chr6_4:79687883-79687902 Msa0998590:CDS 40.0%
AGAGGAGATTTAGAGAATGG+TGG + chr6_4:79687928-79687947 Msa0998590:CDS 40.0%
!! AGTGATGATGGCGAAATCTT+TGG + chr6_4:79688009-79688028 Msa0998590:exon 40.0%
GTCCAATCTCAAATTACAGC+TGG + chr6_4:79688185-79688204 Msa0998590:three_prime_UTR 40.0%
! TCCCAGCTGTAATTTGAGAT+TGG - chr6_4:79688190-79688209 None:intergenic 40.0%
! GTTTTGTAGGTGGGTCACTT+GGG + chr6_4:79680450-79680469 Msa0998590:intron 45.0%
GCACCAACACTTAAGCTTGA+AGG - chr6_4:79681089-79681108 None:intergenic 45.0%
CACACATGTCAGTGTCATGT+CGG + chr6_4:79681337-79681356 Msa0998590:intron 45.0%
TTAGTAGAGATGGCTACAGC+TGG + chr6_4:79681988-79682007 Msa0998590:exon 45.0%
TAGACCTTCAAGCATAGCTC+TGG - chr6_4:79682019-79682038 None:intergenic 45.0%
ACAAAGTTCTTCCCAGCAGA+AGG - chr6_4:79682120-79682139 None:intergenic 45.0%
CGAACAACTAGGTTTGCAAC+TGG - chr6_4:79682156-79682175 None:intergenic 45.0%
TTGCGCATCTACGAACAACT+AGG - chr6_4:79682167-79682186 None:intergenic 45.0%
GACCTCTTCAAGTGATCTTC+AGG + chr6_4:79682377-79682396 Msa0998590:CDS 45.0%
CTCCTGAAGATCACTTGAAG+AGG - chr6_4:79682382-79682401 None:intergenic 45.0%
CTCTTCAAGTGATCTTCAGG+AGG + chr6_4:79682380-79682399 Msa0998590:CDS 45.0%
! TGACATGATGTTAGCTTGGG+AGG + chr6_4:79682548-79682567 Msa0998590:CDS 45.0%
! CCCTGAGATTTTCGCGATTT+TGG - chr6_4:79682890-79682909 None:intergenic 45.0%
! ATTGGTGGGCCTCTTAATGA+AGG - chr6_4:79682918-79682937 None:intergenic 45.0%
! GAGGTGCTTACTTTGTCAAC+TGG + chr6_4:79683400-79683419 Msa0998590:CDS 45.0%
GTGCTTACTTTGTCAACTGG+TGG + chr6_4:79683403-79683422 Msa0998590:CDS 45.0%
CATATATGGGGAACTGAAGG+CGG - chr6_4:79683429-79683448 None:intergenic 45.0%
ATTCCTACATGCTCAAGGAC+CGG - chr6_4:79683904-79683923 None:intergenic 45.0%
GATGCAGCAAAACCATGCAT+TGG + chr6_4:79684122-79684141 Msa0998590:intron 45.0%
ACTCTCTGTAACATGCATGC+AGG + chr6_4:79684166-79684185 Msa0998590:intron 45.0%
TCTGTAACATGCATGCAGGA+AGG + chr6_4:79684170-79684189 Msa0998590:intron 45.0%
AACCTGAATTGACTGGACCA+TGG + chr6_4:79684296-79684315 Msa0998590:CDS 45.0%
ACCTGAATTGACTGGACCAT+GGG + chr6_4:79684297-79684316 Msa0998590:CDS 45.0%
TCAAAAAGTCGAGTACCCCA+TGG - chr6_4:79684316-79684335 None:intergenic 45.0%
TAGATCAGAACCAGCTGTAC+TGG + chr6_4:79684446-79684465 Msa0998590:intron 45.0%
TCAGGAAATTCCAGTACAGC+TGG - chr6_4:79684459-79684478 None:intergenic 45.0%
GACATGCTCGTCGTGATTAT+TGG + chr6_4:79684487-79684506 Msa0998590:CDS 45.0%
TTGGAATTAAAGGGGTGGCA+AGG + chr6_4:79684559-79684578 Msa0998590:CDS 45.0%
TGGAATTAAAGGGGTGGCAA+GGG + chr6_4:79684560-79684579 Msa0998590:CDS 45.0%
!! GCACTTTGGAAGGCTGTTTT+AGG + chr6_4:79684588-79684607 Msa0998590:CDS 45.0%
TTATGTGATCAGCTTCCAGG+TGG + chr6_4:79684687-79684706 Msa0998590:CDS 45.0%
ACTTGAGAGAGTCAGATCAC+GGG + chr6_4:79684745-79684764 Msa0998590:CDS 45.0%
ATACATTCCACTTGCAGGCT+TGG - chr6_4:79684778-79684797 None:intergenic 45.0%
TTCTATCTCGGTCTTGGACA+CGG + chr6_4:79684797-79684816 Msa0998590:CDS 45.0%
GTTGACGGGGTTAAAGTTGA+TGG + chr6_4:79684978-79684997 Msa0998590:CDS 45.0%
AGCGTAAGAGCTTGGCTAAA+AGG - chr6_4:79685056-79685075 None:intergenic 45.0%
GTTTGTGTCAATCAGGTGTC+TGG - chr6_4:79685120-79685139 None:intergenic 45.0%
CGTCGCCTTAAAAGTTAGTC+TGG - chr6_4:79685561-79685580 None:intergenic 45.0%
ATCAGAGCCTATTCGTCAAG+CGG - chr6_4:79685658-79685677 None:intergenic 45.0%
CTGGGCATCTGAAAAAATCG+GGG + chr6_4:79685917-79685936 Msa0998590:intron 45.0%
GCAAGAAAGTTACCCCATCT+TGG - chr6_4:79685982-79686001 None:intergenic 45.0%
AGTTGCGTATAAATGTGGGG+GGG + chr6_4:79686103-79686122 Msa0998590:intron 45.0%
TCCCACGTCAACTAGAGATA+CGG + chr6_4:79686139-79686158 Msa0998590:intron 45.0%
! ACCTCTTGAGCCAGCTTTTA+AGG + chr6_4:79686167-79686186 Msa0998590:intron 45.0%
! ACCTTAAAAGCTGGCTCAAG+AGG - chr6_4:79686171-79686190 None:intergenic 45.0%
AAAGCACAGTCATGTTGTGG+TGG - chr6_4:79686278-79686297 None:intergenic 45.0%
GGTAAAGCACAGTCATGTTG+TGG - chr6_4:79686281-79686300 None:intergenic 45.0%
TCTTCGGTTACATCATCTGG+AGG + chr6_4:79686517-79686536 Msa0998590:CDS 45.0%
! CCAATTTTTGTCAGCCCTCT+AGG - chr6_4:79686838-79686857 None:intergenic 45.0%
CCTAGAGGGCTGACAAAAAT+TGG + chr6_4:79686835-79686854 Msa0998590:intron 45.0%
ATAAATTGCAGGGGTTGGGT+TGG + chr6_4:79687014-79687033 Msa0998590:intron 45.0%
CCCTCCACCAATGAATACAA+TGG + chr6_4:79687136-79687155 Msa0998590:CDS 45.0%
TAATCAGGCAACGGAGAAGA+TGG + chr6_4:79687779-79687798 Msa0998590:intron 45.0%
!!! TCTATCGGCAGGATTGGTTT+TGG + chr6_4:79687812-79687831 Msa0998590:CDS 45.0%
AATGTATGCACCTCCAAGGA+AGG + chr6_4:79687887-79687906 Msa0998590:CDS 45.0%
GGGAGAGGAGATTTAGAGAA+TGG + chr6_4:79687925-79687944 Msa0998590:CDS 45.0%
GGTCGAGATTTGTAACTGTG+TGG - chr6_4:79688106-79688125 None:intergenic 45.0%
GACCATCCGTCATAAGTTAG+TGG + chr6_4:79688122-79688141 Msa0998590:three_prime_UTR 45.0%
TCTCGGCCACTAACTTATGA+CGG - chr6_4:79688131-79688150 None:intergenic 45.0%
CTGAGTCGCTTCCCATATAT+AGG + chr6_4:79688212-79688231 Msa0998590:three_prime_UTR 45.0%
!! ATTAATTAAATTTACTTTAT+AGG + chr6_4:79687540-79687559 Msa0998590:intron 5.0%
!! TTAATTAAATTTACTTTATA+GGG + chr6_4:79687541-79687560 Msa0998590:intron 5.0%
!! GGTTTTGTAGGTGGGTCACT+TGG + chr6_4:79680449-79680468 Msa0998590:intron 50.0%
CGACATGACACTGACATGTG+TGG - chr6_4:79681339-79681358 None:intergenic 50.0%
GTGATTGACACCACTGTTGG+AGG + chr6_4:79681782-79681801 Msa0998590:intron 50.0%
GATCTCAACTCCTCCAACAG+TGG - chr6_4:79681795-79681814 None:intergenic 50.0%
TCAGGAGGGCTTCAATCTAG+AGG + chr6_4:79682395-79682414 Msa0998590:CDS 50.0%
AGGGCCTCTCCTTCATTAAG+AGG + chr6_4:79682906-79682925 Msa0998590:intron 50.0%
TGGGCCTCTTAATGAAGGAG+AGG - chr6_4:79682913-79682932 None:intergenic 50.0%
CTCAGATTGTTGCGAGGTGA+TGG + chr6_4:79682954-79682973 Msa0998590:intron 50.0%
! TTGGCAATGATGGGAACTGC+AGG - chr6_4:79683355-79683374 None:intergenic 50.0%
GTAGGAATATCCACATGGCC+TGG + chr6_4:79683916-79683935 Msa0998590:CDS 50.0%
CCTGAATTGACTGGACCATG+GGG + chr6_4:79684298-79684317 Msa0998590:CDS 50.0%
CGAGCATGTCCTTTAAGCTC+AGG - chr6_4:79684477-79684496 None:intergenic 50.0%
! AAGGGACGAAGCACTTTGGA+AGG + chr6_4:79684578-79684597 Msa0998590:CDS 50.0%
GGCCCAGAGAACTGATATCT+TGG - chr6_4:79684635-79684654 None:intergenic 50.0%
CATGATTCCAAGCCTGCAAG+TGG + chr6_4:79684768-79684787 Msa0998590:CDS 50.0%
CAAACAGCTCTGTTGAGAGC+AGG + chr6_4:79684853-79684872 Msa0998590:CDS 50.0%
GTTGAGAGCAGGATTGCTGT+TGG + chr6_4:79684864-79684883 Msa0998590:CDS 50.0%
CACACAGTCGCAGTCAATCT+TGG + chr6_4:79685217-79685236 Msa0998590:intron 50.0%
TCAGAGCCTATTCGTCAAGC+GGG - chr6_4:79685657-79685676 None:intergenic 50.0%
CTTTGTTCACACGGCAGAGA+CGG - chr6_4:79685879-79685898 None:intergenic 50.0%
AACAGAGACCTGCAAGCTCT+GGG + chr6_4:79685899-79685918 Msa0998590:intron 50.0%
AAATAGATACGAGCGGGGCA+TGG + chr6_4:79685947-79685966 Msa0998590:intron 50.0%
GCCGTATCTCTAGTTGACGT+GGG - chr6_4:79686143-79686162 None:intergenic 50.0%
TGCCGTATCTCTAGTTGACG+TGG - chr6_4:79686144-79686163 None:intergenic 50.0%
!! TTGTGGTGGATAGCTGCCAT+AGG - chr6_4:79686264-79686283 None:intergenic 50.0%
GCAACGGAGAAGATGGCATT+TGG + chr6_4:79687786-79687805 Msa0998590:CDS 50.0%
! GCATTTGGTCTTCTATCGGC+AGG + chr6_4:79687801-79687820 Msa0998590:CDS 50.0%
TGGTCTTCTATCGGCAGGAT+TGG + chr6_4:79687806-79687825 Msa0998590:CDS 50.0%
GAAGGCTAGCACAGAGAGAT+GGG + chr6_4:79687905-79687924 Msa0998590:CDS 50.0%
ACCAGCTGCTCCTGTTAAAC+TGG + chr6_4:79687959-79687978 Msa0998590:CDS 50.0%
TCCAGTTTAACAGGAGCAGC+TGG - chr6_4:79687963-79687982 None:intergenic 50.0%
! GGCCACTAACTTATGACGGA+TGG - chr6_4:79688127-79688146 None:intergenic 50.0%
CACACACGTCAGTGTCGTGT+CGG + chr6_4:79681044-79681063 Msa0998590:intron 55.0%
! GATGTTAGCTTGGGAGGTCC+CGG + chr6_4:79682554-79682573 Msa0998590:CDS 55.0%
GAGAGGCTCAGATTGTTGCG+AGG + chr6_4:79682948-79682967 Msa0998590:intron 55.0%
TGGAACAGTCACCACACAGC+CGG + chr6_4:79683882-79683901 Msa0998590:CDS 55.0%
! AAAGCGCTTACCAGGCCATG+TGG - chr6_4:79683929-79683948 None:intergenic 55.0%
! CCGACACAGCTCTGACACAT+GGG - chr6_4:79684043-79684062 None:intergenic 55.0%
CCCATGTGTCAGAGCTGTGT+CGG + chr6_4:79684040-79684059 Msa0998590:intron 55.0%
! TCCGACACAGCTCTGACACA+TGG - chr6_4:79684044-79684063 None:intergenic 55.0%
CCCCATGGTCCAGTCAATTC+AGG - chr6_4:79684301-79684320 None:intergenic 55.0%
! TGGCAAGGGACGAAGCACTT+TGG + chr6_4:79684574-79684593 Msa0998590:CDS 55.0%
TCGGCACAGGCAACAGTTGA+CGG + chr6_4:79684963-79684982 Msa0998590:CDS 55.0%
ATCCTCCCCGCTTGACGAAT+AGG + chr6_4:79685648-79685667 Msa0998590:intron 55.0%
CAGAGCCTATTCGTCAAGCG+GGG - chr6_4:79685656-79685675 None:intergenic 55.0%
GAACAGAGACCTGCAAGCTC+TGG + chr6_4:79685898-79685917 Msa0998590:intron 55.0%
TTCAGATGCCCAGAGCTTGC+AGG - chr6_4:79685910-79685929 None:intergenic 55.0%
!! TCTGTGCTAGCCTTCCTTGG+AGG - chr6_4:79687900-79687919 None:intergenic 55.0%
!! CTCTCTGTGCTAGCCTTCCT+TGG - chr6_4:79687903-79687922 None:intergenic 55.0%
GGAAGGCTAGCACAGAGAGA+TGG + chr6_4:79687904-79687923 Msa0998590:CDS 55.0%
CTAGCACAGAGAGATGGGAG+AGG + chr6_4:79687910-79687929 Msa0998590:CDS 55.0%
CGACACGACACTGACGTGTG+TGG - chr6_4:79681046-79681065 None:intergenic 60.0%
! CGTCAGTGTCGTGTCGGTGT+TGG + chr6_4:79681050-79681069 Msa0998590:intron 60.0%
!! CGTGTCGGTGTTGGTCACTC+TGG + chr6_4:79681059-79681078 Msa0998590:intron 60.0%
! AGAGGTTGGCTAGTGGCAGC+CGG - chr6_4:79682576-79682595 None:intergenic 60.0%
ATGCTCAAGGACCGGCTGTG+TGG - chr6_4:79683896-79683915 None:intergenic 60.0%
CAGCCGGTCCTTGAGCATGT+AGG + chr6_4:79683898-79683917 Msa0998590:CDS 60.0%
CGGCACAGGCAACAGTTGAC+GGG + chr6_4:79684964-79684983 Msa0998590:CDS 60.0%
GGCACAGGCAACAGTTGACG+GGG + chr6_4:79684965-79684984 Msa0998590:CDS 60.0%
TCGTCAAGCGGGGAGGATTG+AGG - chr6_4:79685646-79685665 None:intergenic 60.0%
AGCCTATTCGTCAAGCGGGG+AGG - chr6_4:79685653-79685672 None:intergenic 60.0%
!! GGGTTGGGTTGGCTATGCAG+TGG + chr6_4:79687025-79687044 Msa0998590:CDS 60.0%
! GAGGTTGGCTAGTGGCAGCC+GGG - chr6_4:79682575-79682594 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 79680103 79688316 79680103 ID=Msa0998590;Name=Msa0998590
chr6_4 mRNA 79680103 79688316 79680103 ID=Msa0998590-mRNA-1;Parent=Msa0998590;Name=Msa0998590-mRNA-1;_AED=0.05;_eAED=0.05;_QI=206|0.88|0.9|1|0.88|0.8|10|303|694
chr6_4 exon 79680103 79680227 79680103 ID=Msa0998590-mRNA-1:exon:15077;Parent=Msa0998590-mRNA-1
chr6_4 exon 79681916 79682187 79681916 ID=Msa0998590-mRNA-1:exon:15078;Parent=Msa0998590-mRNA-1
chr6_4 exon 79682368 79682602 79682368 ID=Msa0998590-mRNA-1:exon:15079;Parent=Msa0998590-mRNA-1
chr6_4 exon 79683301 79683473 79683301 ID=Msa0998590-mRNA-1:exon:15080;Parent=Msa0998590-mRNA-1
chr6_4 exon 79683795 79683937 79683795 ID=Msa0998590-mRNA-1:exon:15081;Parent=Msa0998590-mRNA-1
chr6_4 exon 79684188 79684365 79684188 ID=Msa0998590-mRNA-1:exon:15082;Parent=Msa0998590-mRNA-1
chr6_4 exon 79684449 79685028 79684449 ID=Msa0998590-mRNA-1:exon:15083;Parent=Msa0998590-mRNA-1
chr6_4 exon 79686426 79686538 79686426 ID=Msa0998590-mRNA-1:exon:15084;Parent=Msa0998590-mRNA-1
chr6_4 exon 79687025 79687268 79687025 ID=Msa0998590-mRNA-1:exon:15085;Parent=Msa0998590-mRNA-1
chr6_4 exon 79687786 79688316 79687786 ID=Msa0998590-mRNA-1:exon:15086;Parent=Msa0998590-mRNA-1
chr6_4 five_prime_UTR 79680103 79680227 79680103 ID=Msa0998590-mRNA-1:five_prime_utr;Parent=Msa0998590-mRNA-1
chr6_4 five_prime_UTR 79681916 79681996 79681916 ID=Msa0998590-mRNA-1:five_prime_utr;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79681997 79682187 79681997 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79682368 79682602 79682368 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79683301 79683473 79683301 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79683795 79683937 79683795 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79684188 79684365 79684188 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79684449 79685028 79684449 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79686426 79686538 79686426 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79687025 79687268 79687025 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 CDS 79687786 79688013 79687786 ID=Msa0998590-mRNA-1:cds;Parent=Msa0998590-mRNA-1
chr6_4 three_prime_UTR 79688014 79688316 79688014 ID=Msa0998590-mRNA-1:three_prime_utr;Parent=Msa0998590-mRNA-1
Gene Sequence

>Msa0998590

ATGGCTACAGCTGGAAAAACCAGAGCTATGCTTGAAGGTCTAGTAAAAGATGGATCACTTAAATGGTTGCTTGGCAAGAAGAGTTATTTTGCTGAAGAATTTGAGGAGATGGAAAATTCACCTTCTGCTGGGAAGAACTTTGTACGTGAACTATCTCCAGTTGCAAACCTAGTTGTTCGTAGATGCGCAAAAATCCTTAAGACCTCTTCAAGTGATCTTCAGGAGGGCTTCAATCTAGAGGCGTCTGATTCCCTAAAGAATCCATCACGATATGCAAGGAACTTATTGGAGTATTGTTGTTTCAAAGCACTTTCATTGAAAGCGCAAATATCCGGTCATCTACTTGATAAAACGTTCCGGCGTTTGACATATGACATGATGTTAGCTTGGGAGGTCCCGGCTGCCACTAGCCAACCTCTTACTAATAAGGTTGATGAAGAAGTATCTGTTGGATTAGAAGCTTTCTGTCGAATAGCTCCTGCAGTTCCCATCATTGCCAACGTCATTATTTGTGAAAATCTTTTTGAGGTGCTTACTTTGTCAACTGGTGGCCGCCTTCAGTTCCCCATATATGATAAGTACCTCGGTGGGATAGAAAAAGCAATAAAAAAAATGAAAAGCAATTCAGATTCGTCTCTCCTTTCTGCTATGAGATCAACTAGAGGTGAGAAGATTCTTGAGATTGATGGAACAGTCACCACACAGCCGGTCCTTGAGCATGTAGGAATATCCACATGGCCTGGAAGGTTAATCTTAACAGATCATGCACTTTATTTCGAAGAACTTCGCGTTGTATCATATGACAAACCAAAAAGATATGATTTAGCAGACGATCTAAACCAAGTTGTTAAACCTGAATTGACTGGACCATGGGGTACTCGACTTTTTGACAAAGCAGTATTCTATAGTTCGACATCCTTATCAGAACCAGCTGTACTGGAATTTCCTGAGCTTAAAGGACATGCTCGTCGTGATTATTGGCTAGCCATCATCAGGGAGATTCTTTGTGTTCACAAATTTATAAGCAAGTTTGGAATTAAAGGGGTGGCAAGGGACGAAGCACTTTGGAAGGCTGTTTTAGGAATTTTGCGTTTGCAGGCCATCCAAGATATCAGTTCTCTGGGCCCTGTATTGAATGATTCTCTTCTCATGTTTAATTTATGTGATCAGCTTCCAGGTGGAGACTTGATATTAGAAACCCTTGTAAATATGTCAAACTTGAGAGAGTCAGATCACGGGCATGATTCCAAGCCTGCAAGTGGAATGTATTCTATCTCGGTCTTGGACACGGTTTCTAACTTAGGATTCGTATTTGGAACAAGTTCAAACAGCTCTGTTGAGAGCAGGATTGCTGTTGGTGAAATAACTGTTGGAGAAACGACTTTGTTGGAAAGAGTGGTTAAAGAATCTAAGAACAATTATAAAAAAGTCGTATCGGCACAGGCAACAGTTGACGGGGTTAAAGTTGATGGTATCGACACTAATTTGGCTGTCATGAAGGAACTACTTTATCCTCTAGATGAACTTAGGAAGTGTCTTCAATCTTTGCTAAATTGGGATGATCCATTGAAGTCTTCTGGGTTTTGTTTGTTCTTCGGTTACATCATCTGGAGGGGTTGGGTTGGCTATGCAGTGGCACTAGTGCTTGTGTTCATTTCAGCTTTTATGATCATTACCAGATGTTTTAATCAAGGTAGGTCTGTAGCTGAAGTTAAAGTAATAGCCCCTCCACCAATGAATACAATGGAACAACTTTTAGCTGTTCAGAATGCTGTCTCTCAAGCTGAACAATTCATACAAGATGGTAACATATTTCTTCTCAAGTTTCGTGGCTTGTTACTCTCCATTTTTCCTCAGGCAACGGAGAAGATGGCATTTGGTCTTCTATCGGCAGGATTGGTTTTGGCTTTCTTACCTACGAAATACATAGTTCTCCTTGTGTTCTTGAACATATTTACAATGTATGCACCTCCAAGGAAGGCTAGCACAGAGAGATGGGAGAGGAGATTTAGAGAATGGTGGTTCAGCATACCAGCTGCTCCTGTTAAACTGGAAAGAGATAAAGAGGACAAGAAGAAAAAGTGA
Protein sequence

>Msa0998590

MATAGKTRAMLEGLVKDGSLKWLLGKKSYFAEEFEEMENSPSAGKNFVRELSPVANLVVRRCAKILKTSSSDLQEGFNLEASDSLKNPSRYARNLLEYCCFKALSLKAQISGHLLDKTFRRLTYDMMLAWEVPAATSQPLTNKVDEEVSVGLEAFCRIAPAVPIIANVIICENLFEVLTLSTGGRLQFPIYDKYLGGIEKAIKKMKSNSDSSLLSAMRSTRGEKILEIDGTVTTQPVLEHVGISTWPGRLILTDHALYFEELRVVSYDKPKRYDLADDLNQVVKPELTGPWGTRLFDKAVFYSSTSLSEPAVLEFPELKGHARRDYWLAIIREILCVHKFISKFGIKGVARDEALWKAVLGILRLQAIQDISSLGPVLNDSLLMFNLCDQLPGGDLILETLVNMSNLRESDHGHDSKPASGMYSISVLDTVSNLGFVFGTSSNSSVESRIAVGEITVGETTLLERVVKESKNNYKKVVSAQATVDGVKVDGIDTNLAVMKELLYPLDELRKCLQSLLNWDDPLKSSGFCLFFGYIIWRGWVGYAVALVLVFISAFMIITRCFNQGRSVAEVKVIAPPPMNTMEQLLAVQNAVSQAEQFIQDGNIFLLKFRGLLLSIFPQATEKMAFGLLSAGLVLAFLPTKYIVLLVFLNIFTMYAPPRKASTERWERRFREWWFSIPAAPVKLERDKEDKKKK*