Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142460 | XP_003630199.1 | 97.136 | 419 | 11 | 1 | 1 | 419 | 1 | 418 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142460 | sp|Q9FLF4|PUB27_ARATH | 54.651 | 430 | 174 | 7 | 1 | 419 | 1 | 420 | 1.17e-144 | 421 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142460 | G7LD36 | 97.136 | 419 | 11 | 1 | 1 | 419 | 1 | 418 | 0.0 | 818 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0142460 | 0.804750 | 1.859116e-49 | -8.615850e-47 |
| Msa0007990 | Msa0142460 | 0.802311 | 5.959355e-49 | -8.615850e-47 |
| Msa0011930 | Msa0142460 | 0.810148 | 1.331549e-50 | -8.615850e-47 |
| Msa0014570 | Msa0142460 | 0.834426 | 3.018515e-56 | -8.615850e-47 |
| Msa0015670 | Msa0142460 | 0.812194 | 4.793243e-51 | -8.615850e-47 |
| Msa0022750 | Msa0142460 | -0.821898 | 3.160693e-53 | -8.615850e-47 |
| Msa0026430 | Msa0142460 | 0.808955 | 2.401668e-50 | -8.615850e-47 |
| Msa0032320 | Msa0142460 | 0.826883 | 2.124499e-54 | -8.615850e-47 |
| Msa0039250 | Msa0142460 | 0.832964 | 6.997122e-56 | -8.615850e-47 |
| Msa0039570 | Msa0142460 | 0.806065 | 9.859029e-50 | -8.615850e-47 |
| Msa0043500 | Msa0142460 | 0.815392 | 9.467007e-52 | -8.615850e-47 |
| Msa0043560 | Msa0142460 | 0.812217 | 4.737461e-51 | -8.615850e-47 |
| Msa0043650 | Msa0142460 | 0.807558 | 4.767353e-50 | -8.615850e-47 |
| Msa0045550 | Msa0142460 | 0.805162 | 1.525233e-49 | -8.615850e-47 |
| Msa0049780 | Msa0142460 | 0.803736 | 3.023635e-49 | -8.615850e-47 |
| Msa0054820 | Msa0142460 | 0.836407 | 9.529814e-57 | -8.615850e-47 |
| Msa0055070 | Msa0142460 | 0.855102 | 7.900191e-62 | -8.615850e-47 |
| Msa0056450 | Msa0142460 | 0.803327 | 3.675130e-49 | -8.615850e-47 |
| Msa0064110 | Msa0142460 | 0.812334 | 4.466617e-51 | -8.615850e-47 |
| Msa0077450 | Msa0142460 | 0.833656 | 4.706067e-56 | -8.615850e-47 |
| Msa0080830 | Msa0142460 | 0.805032 | 1.623827e-49 | -8.615850e-47 |
| Msa0092410 | Msa0142460 | 0.810473 | 1.132545e-50 | -8.615850e-47 |
| Msa0100160 | Msa0142460 | 0.824498 | 7.813006e-54 | -8.615850e-47 |
| Msa0101020 | Msa0142460 | 0.856967 | 2.248478e-62 | -8.615850e-47 |
| Msa0103250 | Msa0142460 | 0.809481 | 1.852141e-50 | -8.615850e-47 |
| Msa0106620 | Msa0142460 | 0.819227 | 1.297183e-52 | -8.615850e-47 |
| Msa0106710 | Msa0142460 | 0.804024 | 2.633938e-49 | -8.615850e-47 |
| Msa0108390 | Msa0142460 | 0.837559 | 4.840591e-57 | -8.615850e-47 |
| Msa0112270 | Msa0142460 | 0.813541 | 2.429273e-51 | -8.615850e-47 |
| Msa0116790 | Msa0142460 | 0.812291 | 4.565258e-51 | -8.615850e-47 |
| Msa0133720 | Msa0142460 | 0.835547 | 1.574907e-56 | -8.615850e-47 |
| Msa0133820 | Msa0142460 | 0.838852 | 2.248119e-57 | -8.615850e-47 |
| Msa0142460 | Msa0143850 | 0.807142 | 5.839694e-50 | -8.615850e-47 |
| Msa0142460 | Msa0145110 | 0.839036 | 2.014510e-57 | -8.615850e-47 |
| Msa0142460 | Msa0149300 | 0.801704 | 7.942973e-49 | -8.615850e-47 |
| Msa0142460 | Msa0152400 | 0.804905 | 1.725614e-49 | -8.615850e-47 |
| Msa0142460 | Msa0154440 | 0.818749 | 1.666015e-52 | -8.615850e-47 |
| Msa0142460 | Msa0170140 | 0.827389 | 1.607199e-54 | -8.615850e-47 |
| Msa0142460 | Msa0173390 | 0.812085 | 5.061668e-51 | -8.615850e-47 |
| Msa0142460 | Msa0178510 | 0.814412 | 1.561010e-51 | -8.615850e-47 |
| Msa0142460 | Msa0181230 | 0.817709 | 2.864982e-52 | -8.615850e-47 |
| Msa0142460 | Msa0186950 | 0.805624 | 1.220271e-49 | -8.615850e-47 |
| Msa0142460 | Msa0187030 | 0.871655 | 5.790531e-67 | -8.615850e-47 |
| Msa0142460 | Msa0187830 | 0.828224 | 1.012717e-54 | -8.615850e-47 |
| Msa0142460 | Msa0191890 | 0.870800 | 1.110047e-66 | -8.615850e-47 |
| Msa0142460 | Msa0193540 | 0.802959 | 4.378833e-49 | -8.615850e-47 |
| Msa0142460 | Msa0194890 | 0.803552 | 3.301277e-49 | -8.615850e-47 |
| Msa0142460 | Msa0196340 | 0.806202 | 9.224777e-50 | -8.615850e-47 |
| Msa0142460 | Msa0204840 | 0.811745 | 6.004219e-51 | -8.615850e-47 |
| Msa0142460 | Msa0207350 | 0.814474 | 1.512460e-51 | -8.615850e-47 |
| Msa0142460 | Msa0218350 | 0.814963 | 1.178509e-51 | -8.615850e-47 |
| Msa0142460 | Msa0220290 | -0.803065 | 4.165023e-49 | -8.615850e-47 |
| Msa0142460 | Msa0220730 | 0.811625 | 6.375014e-51 | -8.615850e-47 |
| Msa0142460 | Msa0227230 | 0.806291 | 8.835283e-50 | -8.615850e-47 |
| Msa0142460 | Msa0227340 | 0.826871 | 2.138531e-54 | -8.615850e-47 |
| Msa0142460 | Msa0230370 | 0.878071 | 3.777386e-69 | -8.615850e-47 |
| Msa0142460 | Msa0236770 | 0.801462 | 8.902668e-49 | -8.615850e-47 |
| Msa0142460 | Msa0238230 | 0.828226 | 1.011254e-54 | -8.615850e-47 |
| Msa0142460 | Msa0243320 | 0.800143 | 1.654644e-48 | -8.615850e-47 |
| Msa0142460 | Msa0251050 | 0.825341 | 4.941179e-54 | -8.615850e-47 |
| Msa0142460 | Msa0254790 | 0.804468 | 2.129443e-49 | -8.615850e-47 |
| Msa0142460 | Msa0255850 | 0.809221 | 2.105701e-50 | -8.615850e-47 |
| Msa0142460 | Msa0259500 | 0.811439 | 6.999099e-51 | -8.615850e-47 |
| Msa0142460 | Msa0261160 | 0.808190 | 3.497616e-50 | -8.615850e-47 |
| Msa0142460 | Msa0264780 | 0.807748 | 4.343975e-50 | -8.615850e-47 |
| Msa0142460 | Msa0264830 | 0.823929 | 1.063064e-53 | -8.615850e-47 |
| Msa0142460 | Msa0265850 | 0.802550 | 5.319292e-49 | -8.615850e-47 |
| Msa0142460 | Msa0269560 | 0.808224 | 3.440177e-50 | -8.615850e-47 |
| Msa0142460 | Msa0277420 | 0.860673 | 1.752579e-63 | -8.615850e-47 |
| Msa0142460 | Msa0294060 | 0.802217 | 6.230313e-49 | -8.615850e-47 |
| Msa0142460 | Msa0302870 | 0.822333 | 2.506007e-53 | -8.615850e-47 |
| Msa0142460 | Msa0305700 | 0.824856 | 6.435554e-54 | -8.615850e-47 |
| Msa0142460 | Msa0311610 | 0.819899 | 9.113482e-53 | -8.615850e-47 |
| Msa0142460 | Msa0312530 | 0.882987 | 6.565128e-71 | -8.615850e-47 |
| Msa0142460 | Msa0317270 | 0.860143 | 2.536053e-63 | -8.615850e-47 |
| Msa0142460 | Msa0317740 | 0.800684 | 1.283880e-48 | -8.615850e-47 |
| Msa0142460 | Msa0322900 | 0.809186 | 2.142668e-50 | -8.615850e-47 |
| Msa0142460 | Msa0328070 | 0.830033 | 3.688339e-55 | -8.615850e-47 |
| Msa0142460 | Msa0340340 | 0.826687 | 2.366072e-54 | -8.615850e-47 |
| Msa0142460 | Msa0341540 | 0.815588 | 8.561295e-52 | -8.615850e-47 |
| Msa0142460 | Msa0343420 | 0.801102 | 1.054998e-48 | -8.615850e-47 |
| Msa0142460 | Msa0346990 | 0.820515 | 6.585582e-53 | -8.615850e-47 |
| Msa0142460 | Msa0347950 | 0.811584 | 6.506989e-51 | -8.615850e-47 |
| Msa0142460 | Msa0347990 | 0.816416 | 5.592628e-52 | -8.615850e-47 |
| Msa0142460 | Msa0348180 | 0.807097 | 5.970915e-50 | -8.615850e-47 |
| Msa0142460 | Msa0382370 | 0.808573 | 2.898429e-50 | -8.615850e-47 |
| Msa0142460 | Msa0382490 | 0.822880 | 1.868945e-53 | -8.615850e-47 |
| Msa0142460 | Msa0392200 | 0.829521 | 4.914525e-55 | -8.615850e-47 |
| Msa0142460 | Msa0397820 | 0.817912 | 2.577538e-52 | -8.615850e-47 |
| Msa0142460 | Msa0403660 | 0.829205 | 5.864694e-55 | -8.615850e-47 |
| Msa0142460 | Msa0418190 | 0.808106 | 3.644738e-50 | -8.615850e-47 |
| Msa0142460 | Msa0422180 | 0.828615 | 8.149044e-55 | -8.615850e-47 |
| Msa0142460 | Msa0429090 | 0.823950 | 1.051201e-53 | -8.615850e-47 |
| Msa0142460 | Msa0432160 | 0.835454 | 1.662343e-56 | -8.615850e-47 |
| Msa0142460 | Msa0432670 | 0.847719 | 9.678118e-60 | -8.615850e-47 |
| Msa0142460 | Msa0436370 | 0.863965 | 1.707601e-64 | -8.615850e-47 |
| Msa0142460 | Msa0468410 | 0.800899 | 1.160412e-48 | -8.615850e-47 |
| Msa0142460 | Msa0468800 | 0.816977 | 4.186218e-52 | -8.615850e-47 |
| Msa0142460 | Msa0475500 | 0.817552 | 3.107942e-52 | -8.615850e-47 |
| Msa0142460 | Msa0476680 | 0.831940 | 1.255612e-55 | -8.615850e-47 |
| Msa0142460 | Msa0485240 | 0.812338 | 4.458140e-51 | -8.615850e-47 |
| Msa0142460 | Msa0514610 | 0.807053 | 6.099858e-50 | -8.615850e-47 |
| Msa0142460 | Msa0518030 | 0.800093 | 1.694137e-48 | -8.615850e-47 |
| Msa0142460 | Msa0521010 | 0.829589 | 4.729256e-55 | -8.615850e-47 |
| Msa0142460 | Msa0521670 | 0.816494 | 5.371988e-52 | -8.615850e-47 |
| Msa0142460 | Msa0534400 | 0.836841 | 7.388072e-57 | -8.615850e-47 |
| Msa0142460 | Msa0544660 | 0.816891 | 4.376596e-52 | -8.615850e-47 |
| Msa0142460 | Msa0556010 | 0.836006 | 1.205054e-56 | -8.615850e-47 |
| Msa0142460 | Msa0559500 | 0.846552 | 2.021733e-59 | -8.615850e-47 |
| Msa0142460 | Msa0572420 | 0.809826 | 1.561644e-50 | -8.615850e-47 |
| Msa0142460 | Msa0572480 | 0.850319 | 1.833206e-60 | -8.615850e-47 |
| Msa0142460 | Msa0575660 | 0.813885 | 2.041085e-51 | -8.615850e-47 |
| Msa0142460 | Msa0576890 | 0.804961 | 1.679641e-49 | -8.615850e-47 |
| Msa0142460 | Msa0579660 | 0.847496 | 1.114712e-59 | -8.615850e-47 |
| Msa0142460 | Msa0581050 | 0.814149 | 1.784637e-51 | -8.615850e-47 |
| Msa0142460 | Msa0581690 | 0.809305 | 2.020411e-50 | -8.615850e-47 |
| Msa0142460 | Msa0583500 | 0.820478 | 6.715966e-53 | -8.615850e-47 |
| Msa0142460 | Msa0597770 | 0.812075 | 5.086965e-51 | -8.615850e-47 |
| Msa0142460 | Msa0598160 | 0.816956 | 4.231444e-52 | -8.615850e-47 |
| Msa0142460 | Msa0608200 | 0.809546 | 1.793408e-50 | -8.615850e-47 |
| Msa0142460 | Msa0613710 | 0.805954 | 1.040243e-49 | -8.615850e-47 |
| Msa0142460 | Msa0616450 | 0.817835 | 2.683969e-52 | -8.615850e-47 |
| Msa0142460 | Msa0616550 | 0.808143 | 3.578844e-50 | -8.615850e-47 |
| Msa0142460 | Msa0630940 | 0.812722 | 3.675488e-51 | -8.615850e-47 |
| Msa0142460 | Msa0636020 | 0.810271 | 1.252222e-50 | -8.615850e-47 |
| Msa0142460 | Msa0637900 | 0.804302 | 2.305747e-49 | -8.615850e-47 |
| Msa0142460 | Msa0638350 | 0.813108 | 3.025036e-51 | -8.615850e-47 |
| Msa0142460 | Msa0638360 | 0.853464 | 2.349316e-61 | -8.615850e-47 |
| Msa0142460 | Msa0648520 | 0.825027 | 5.862884e-54 | -8.615850e-47 |
| Msa0142460 | Msa0655920 | 0.813490 | 2.493010e-51 | -8.615850e-47 |
| Msa0142460 | Msa0656000 | 0.808556 | 2.923199e-50 | -8.615850e-47 |
| Msa0142460 | Msa0669180 | 0.804832 | 1.787343e-49 | -8.615850e-47 |
| Msa0142460 | Msa0670160 | 0.802268 | 6.081004e-49 | -8.615850e-47 |
| Msa0142460 | Msa0689760 | 0.842971 | 1.866177e-58 | -8.615850e-47 |
| Msa0142460 | Msa0691050 | 0.855039 | 8.243622e-62 | -8.615850e-47 |
| Msa0142460 | Msa0696850 | 0.831623 | 1.503139e-55 | -8.615850e-47 |
| Msa0142460 | Msa0696860 | 0.833547 | 5.010259e-56 | -8.615850e-47 |
| Msa0142460 | Msa0698290 | 0.817359 | 3.434600e-52 | -8.615850e-47 |
| Msa0142460 | Msa0699880 | 0.817395 | 3.371233e-52 | -8.615850e-47 |
| Msa0142460 | Msa0702590 | 0.804915 | 1.717266e-49 | -8.615850e-47 |
| Msa0142460 | Msa0710270 | 0.826360 | 2.831913e-54 | -8.615850e-47 |
| Msa0142460 | Msa0711130 | 0.802093 | 6.606851e-49 | -8.615850e-47 |
| Msa0142460 | Msa0713680 | 0.808177 | 3.520819e-50 | -8.615850e-47 |
| Msa0142460 | Msa0713870 | 0.804001 | 2.663485e-49 | -8.615850e-47 |
| Msa0142460 | Msa0715420 | 0.811625 | 6.375923e-51 | -8.615850e-47 |
| Msa0142460 | Msa0716860 | 0.830332 | 3.117462e-55 | -8.615850e-47 |
| Msa0142460 | Msa0737570 | 0.801555 | 8.519577e-49 | -8.615850e-47 |
| Msa0142460 | Msa0740720 | 0.823667 | 1.224454e-53 | -8.615850e-47 |
| Msa0142460 | Msa0750000 | 0.803046 | 4.202657e-49 | -8.615850e-47 |
| Msa0142460 | Msa0750250 | 0.848231 | 6.993567e-60 | -8.615850e-47 |
| Msa0142460 | Msa0751260 | 0.854960 | 8.689423e-62 | -8.615850e-47 |
| Msa0142460 | Msa0757800 | 0.832838 | 7.520951e-56 | -8.615850e-47 |
| Msa0142460 | Msa0768440 | 0.810082 | 1.375215e-50 | -8.615850e-47 |
| Msa0142460 | Msa0784480 | 0.803367 | 3.606768e-49 | -8.615850e-47 |
| Msa0142460 | Msa0795070 | 0.868559 | 5.967946e-66 | -8.615850e-47 |
| Msa0142460 | Msa0797250 | 0.801833 | 7.472028e-49 | -8.615850e-47 |
| Msa0142460 | Msa0800770 | 0.820367 | 7.120406e-53 | -8.615850e-47 |
| Msa0142460 | Msa0810270 | 0.818127 | 2.305425e-52 | -8.615850e-47 |
| Msa0142460 | Msa0811130 | 0.805844 | 1.097233e-49 | -8.615850e-47 |
| Msa0142460 | Msa0828240 | 0.818904 | 1.536351e-52 | -8.615850e-47 |
| Msa0142460 | Msa0833520 | 0.808426 | 3.115931e-50 | -8.615850e-47 |
| Msa0142460 | Msa0838930 | 0.816456 | 5.477508e-52 | -8.615850e-47 |
| Msa0142460 | Msa0857220 | 0.830630 | 2.635983e-55 | -8.615850e-47 |
| Msa0142460 | Msa0861450 | 0.828895 | 6.971515e-55 | -8.615850e-47 |
| Msa0142460 | Msa0861510 | 0.859401 | 4.243877e-63 | -8.615850e-47 |
| Msa0142460 | Msa0861530 | 0.865936 | 4.112056e-65 | -8.615850e-47 |
| Msa0142460 | Msa0861600 | 0.858311 | 8.989691e-63 | -8.615850e-47 |
| Msa0142460 | Msa0865970 | 0.811676 | 6.214250e-51 | -8.615850e-47 |
| Msa0142460 | Msa0866070 | 0.805997 | 1.018583e-49 | -8.615850e-47 |
| Msa0142460 | Msa0866520 | 0.805780 | 1.131681e-49 | -8.615850e-47 |
| Msa0142460 | Msa0873860 | 0.821973 | 3.036882e-53 | -8.615850e-47 |
| Msa0142460 | Msa0892570 | 0.813577 | 2.385423e-51 | -8.615850e-47 |
| Msa0142460 | Msa0900620 | 0.815011 | 1.150043e-51 | -8.615850e-47 |
| Msa0142460 | Msa0902830 | 0.816919 | 4.313509e-52 | -8.615850e-47 |
| Msa0142460 | Msa0903780 | 0.807828 | 4.178001e-50 | -8.615850e-47 |
| Msa0142460 | Msa0929950 | 0.825487 | 4.562939e-54 | -8.615850e-47 |
| Msa0142460 | Msa0936390 | 0.813005 | 3.185966e-51 | -8.615850e-47 |
| Msa0142460 | Msa0937430 | 0.824016 | 1.014319e-53 | -8.615850e-47 |
| Msa0142460 | Msa0969520 | 0.800742 | 1.249749e-48 | -8.615850e-47 |
| Msa0142460 | Msa0975940 | 0.810825 | 9.508140e-51 | -8.615850e-47 |
| Msa0142460 | Msa1008750 | 0.832082 | 1.157956e-55 | -8.615850e-47 |
| Msa0142460 | Msa1010070 | 0.826298 | 2.928539e-54 | -8.615850e-47 |
| Msa0142460 | Msa1019000 | 0.809097 | 2.238610e-50 | -8.615850e-47 |
| Msa0142460 | Msa1022820 | 0.809248 | 2.078031e-50 | -8.615850e-47 |
| Msa0142460 | Msa1027990 | 0.813076 | 3.073528e-51 | -8.615850e-47 |
| Msa0142460 | Msa1032170 | 0.800490 | 1.406700e-48 | -8.615850e-47 |
| Msa0142460 | Msa1033970 | 0.809947 | 1.470842e-50 | -8.615850e-47 |
| Msa0142460 | Msa1034500 | 0.823348 | 1.453679e-53 | -8.615850e-47 |
| Msa0142460 | Msa1041670 | 0.800168 | 1.635722e-48 | -8.615850e-47 |
| Msa0142460 | Msa1050740 | 0.804583 | 2.014747e-49 | -8.615850e-47 |
| Msa0142460 | Msa1061980 | 0.807298 | 5.411998e-50 | -8.615850e-47 |
| Msa0142460 | Msa1063420 | 0.801492 | 8.778379e-49 | -8.615850e-47 |
| Msa0142460 | Msa1070840 | 0.809294 | 2.031751e-50 | -8.615850e-47 |
| Msa0142460 | Msa1079430 | 0.828084 | 1.094003e-54 | -8.615850e-47 |
| Msa0142460 | Msa1080960 | 0.811169 | 8.007163e-51 | -8.615850e-47 |
| Msa0142460 | Msa1085330 | 0.800532 | 1.378865e-48 | -8.615850e-47 |
| Msa0142460 | Msa1096060 | 0.810052 | 1.396102e-50 | -8.615850e-47 |
| Msa0142460 | Msa1098270 | 0.824168 | 9.341097e-54 | -8.615850e-47 |
| Msa0142460 | Msa1102770 | 0.802556 | 5.305750e-49 | -8.615850e-47 |
| Msa0142460 | Msa1118610 | 0.847153 | 1.384983e-59 | -8.615850e-47 |
| Msa0142460 | Msa1118760 | 0.841460 | 4.689274e-58 | -8.615850e-47 |
| Msa0142460 | Msa1127430 | 0.814704 | 1.345378e-51 | -8.615850e-47 |
| Msa0142460 | Msa1131050 | 0.805064 | 1.598678e-49 | -8.615850e-47 |
| Msa0142460 | Msa1133220 | 0.849251 | 3.646018e-60 | -8.615850e-47 |
| Msa0142460 | Msa1137570 | 0.807613 | 4.641442e-50 | -8.615850e-47 |
| Msa0142460 | Msa1138320 | 0.809963 | 1.459399e-50 | -8.615850e-47 |
| Msa0142460 | Msa1142670 | 0.804360 | 2.243022e-49 | -8.615850e-47 |
| Msa0142460 | Msa1143020 | 0.830528 | 2.791980e-55 | -8.615850e-47 |
| Msa0142460 | Msa1144940 | 0.811779 | 5.900918e-51 | -8.615850e-47 |
| Msa0142460 | Msa1147740 | 0.809206 | 2.122126e-50 | -8.615850e-47 |
| Msa0142460 | Msa1158660 | 0.827440 | 1.563110e-54 | -8.615850e-47 |
| Msa0142460 | Msa1166560 | 0.801495 | 8.766168e-49 | -8.615850e-47 |
| Msa0142460 | Msa1168550 | 0.832592 | 8.657495e-56 | -8.615850e-47 |
| Msa0142460 | Msa1168590 | 0.838681 | 2.489149e-57 | -8.615850e-47 |
| Msa0142460 | Msa1169720 | 0.835248 | 1.874566e-56 | -8.615850e-47 |
| Msa0142460 | Msa1177780 | 0.818873 | 1.561872e-52 | -8.615850e-47 |
| Msa0142460 | Msa1179940 | 0.803425 | 3.506882e-49 | -8.615850e-47 |
| Msa0142460 | Msa1179970 | 0.801403 | 9.154768e-49 | -8.615850e-47 |
| Msa0142460 | Msa1188710 | 0.840181 | 1.015012e-57 | -8.615850e-47 |
| Msa0142460 | Msa1199570 | 0.810822 | 9.523069e-51 | -8.615850e-47 |
| Msa0142460 | Msa1204100 | -0.823529 | 1.318914e-53 | -8.615850e-47 |
| Msa0142460 | Msa1208580 | 0.819496 | 1.126771e-52 | -8.615850e-47 |
| Msa0142460 | Msa1214320 | 0.804355 | 2.247982e-49 | -8.615850e-47 |
| Msa0142460 | Msa1219900 | 0.841974 | 3.431831e-58 | -8.615850e-47 |
| Msa0142460 | Msa1224840 | 0.804959 | 1.681723e-49 | -8.615850e-47 |
| Msa0142460 | Msa1225100 | 0.801699 | 7.959855e-49 | -8.615850e-47 |
| Msa0142460 | Msa1238820 | 0.807591 | 4.690769e-50 | -8.615850e-47 |
| Msa0142460 | Msa1258890 | 0.819070 | 1.408580e-52 | -8.615850e-47 |
| Msa0142460 | Msa1262010 | 0.803427 | 3.504185e-49 | -8.615850e-47 |
| Msa0142460 | Msa1266490 | 0.835107 | 2.033927e-56 | -8.615850e-47 |
| Msa0142460 | Msa1282500 | 0.809437 | 1.892641e-50 | -8.615850e-47 |
| Msa0142460 | Msa1286550 | 0.832431 | 9.488536e-56 | -8.615850e-47 |
| Msa0142460 | Msa1288450 | 0.803902 | 2.792546e-49 | -8.615850e-47 |
| Msa0142460 | Msa1307550 | 0.800513 | 1.391555e-48 | -8.615850e-47 |
| Msa0142460 | Msa1319820 | 0.864212 | 1.430365e-64 | -8.615850e-47 |
| Msa0142460 | Msa1323690 | 0.810979 | 8.804278e-51 | -8.615850e-47 |
| Msa0142460 | Msa1328640 | 0.832529 | 8.974450e-56 | -8.615850e-47 |
| Msa0142460 | Msa1329050 | -0.820041 | 8.455141e-53 | -8.615850e-47 |
| Msa0142460 | Msa1329870 | 0.800256 | 1.569762e-48 | -8.615850e-47 |
| Msa0142460 | Msa1330170 | 0.834256 | 3.330489e-56 | -8.615850e-47 |
| Msa0142460 | Msa1330180 | 0.840320 | 9.337617e-58 | -8.615850e-47 |
| Msa0142460 | Msa1332000 | 0.801704 | 7.939765e-49 | -8.615850e-47 |
| Msa0142460 | Msa1334490 | 0.812268 | 4.617574e-51 | -8.615850e-47 |
| Msa0142460 | Msa1336040 | 0.810202 | 1.296041e-50 | -8.615850e-47 |
| Msa0142460 | Msa1345810 | 0.811117 | 8.220714e-51 | -8.615850e-47 |
| Msa0142460 | Msa1348090 | 0.823920 | 1.068137e-53 | -8.615850e-47 |
| Msa0142460 | Msa1349450 | 0.829581 | 4.751098e-55 | -8.615850e-47 |
| Msa0142460 | Msa1353470 | 0.804720 | 1.886783e-49 | -8.615850e-47 |
| Msa0142460 | Msa1359560 | 0.810653 | 1.035806e-50 | -8.615850e-47 |
| Msa0142460 | Msa1359920 | 0.838479 | 2.805971e-57 | -8.615850e-47 |
| Msa0142460 | Msa1366300 | 0.838317 | 3.089013e-57 | -8.615850e-47 |
| Msa0142460 | Msa1368430 | 0.819501 | 1.123858e-52 | -8.615850e-47 |
| Msa0142460 | Msa1369780 | 0.826190 | 3.107180e-54 | -8.615850e-47 |
| Msa0142460 | Msa1379590 | 0.836508 | 8.980080e-57 | -8.615850e-47 |
| Msa0142460 | Msa1379850 | 0.864043 | 1.614637e-64 | -8.615850e-47 |
| Msa0142460 | Msa1383230 | 0.816296 | 5.949235e-52 | -8.615850e-47 |
| Msa0142460 | Msa1396780 | 0.835254 | 1.867032e-56 | -8.615850e-47 |
| Msa0142460 | Msa1401270 | 0.870536 | 1.355414e-66 | -8.615850e-47 |
| Msa0142460 | Msa1405220 | 0.804471 | 2.126087e-49 | -8.615850e-47 |
| Msa0142460 | Msa1408620 | -0.835341 | 1.775031e-56 | -8.615850e-47 |
| Msa0142460 | Msa1409490 | 0.818042 | 2.409758e-52 | -8.615850e-47 |
| Msa0142460 | Msa1410420 | 0.829859 | 4.065879e-55 | -8.615850e-47 |
| Msa0142460 | Msa1418240 | 0.820341 | 7.218628e-53 | -8.615850e-47 |
| Msa0142460 | Msa1418260 | 0.823854 | 1.106727e-53 | -8.615850e-47 |
| Msa0142460 | Msa1420250 | 0.838199 | 3.313764e-57 | -8.615850e-47 |
| Msa0142460 | Msa1424630 | 0.821785 | 3.357509e-53 | -8.615850e-47 |
| Msa0142460 | Msa1424640 | 0.836275 | 1.029711e-56 | -8.615850e-47 |
| Msa0142460 | Msa1425090 | 0.803293 | 3.735207e-49 | -8.615850e-47 |
| Msa0142460 | Msa1429680 | 0.802283 | 6.037596e-49 | -8.615850e-47 |
| Msa0142460 | Msa1433220 | 0.844424 | 7.626007e-59 | -8.615850e-47 |
| Msa0142460 | Msa1440740 | 0.820185 | 7.838741e-53 | -8.615850e-47 |
| Msa0142460 | Msa1446780 | 0.805778 | 1.132905e-49 | -8.615850e-47 |
| Msa0142460 | Msa1453360 | 0.841120 | 5.761851e-58 | -8.615850e-47 |
| Msa0142460 | Msa1454530 | 0.832214 | 1.073845e-55 | -8.615850e-47 |
| Msa0142460 | Msa1456230 | 0.819162 | 1.342206e-52 | -8.615850e-47 |
| Msa0142460 | Msa1458340 | 0.849539 | 3.030408e-60 | -8.615850e-47 |
| Msa0142460 | Msa1458600 | 0.802672 | 5.019448e-49 | -8.615850e-47 |
| Msa0142460 | Msa1459100 | 0.802171 | 6.366971e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142460 | MtrunA17_Chr8g0384041 | 97.136 | 419 | 11 | 1 | 1 | 419 | 1 | 418 | 0.0 | 818 |
| Msa0142460 | MtrunA17_Chr3g0129811 | 64.789 | 426 | 136 | 6 | 1 | 419 | 71 | 489 | 0.0 | 535 |
| Msa0142460 | MtrunA17_Chr5g0434171 | 29.263 | 434 | 261 | 19 | 8 | 419 | 33 | 442 | 3.22e-39 | 146 |
| Msa0142460 | MtrunA17_Chr5g0400971 | 30.673 | 401 | 245 | 12 | 5 | 401 | 63 | 434 | 1.04e-38 | 144 |
| Msa0142460 | MtrunA17_Chr7g0267501 | 30.073 | 409 | 251 | 12 | 8 | 397 | 6 | 398 | 1.20e-37 | 141 |
| Msa0142460 | MtrunA17_Chr6g0479261 | 27.830 | 424 | 266 | 13 | 8 | 408 | 23 | 429 | 1.76e-37 | 141 |
| Msa0142460 | MtrunA17_Chr2g0322021 | 28.607 | 402 | 253 | 9 | 8 | 397 | 4 | 383 | 2.87e-35 | 134 |
| Msa0142460 | MtrunA17_Chr5g0420471 | 27.123 | 424 | 269 | 13 | 8 | 408 | 23 | 429 | 3.52e-34 | 132 |
| Msa0142460 | MtrunA17_Chr1g0177281 | 28.054 | 442 | 269 | 13 | 8 | 419 | 5 | 427 | 3.25e-33 | 129 |
| Msa0142460 | MtrunA17_Chr1g0152291 | 27.873 | 409 | 242 | 13 | 10 | 401 | 45 | 417 | 4.83e-33 | 129 |
| Msa0142460 | MtrunA17_Chr1g0177261 | 27.602 | 442 | 271 | 13 | 8 | 419 | 5 | 427 | 2.87e-31 | 124 |
| Msa0142460 | MtrunA17_Chr3g0110121 | 25.935 | 401 | 271 | 10 | 8 | 398 | 34 | 418 | 2.96e-30 | 121 |
| Msa0142460 | MtrunA17_Chr1g0177271 | 27.563 | 439 | 275 | 12 | 8 | 419 | 5 | 427 | 7.21e-30 | 120 |
| Msa0142460 | MtrunA17_Chr4g0044631 | 28.288 | 403 | 260 | 11 | 5 | 399 | 9 | 390 | 2.69e-28 | 115 |
| Msa0142460 | MtrunA17_Chr4g0031431 | 26.952 | 397 | 255 | 12 | 9 | 396 | 254 | 624 | 7.71e-28 | 116 |
| Msa0142460 | MtrunA17_Chr7g0237931 | 25.558 | 403 | 256 | 14 | 10 | 400 | 237 | 607 | 2.72e-26 | 111 |
| Msa0142460 | MtrunA17_Chr4g0025501 | 25.829 | 422 | 274 | 15 | 8 | 409 | 4 | 406 | 8.31e-26 | 108 |
| Msa0142460 | MtrunA17_Chr4g0044411 | 26.230 | 366 | 222 | 12 | 7 | 354 | 270 | 605 | 1.03e-25 | 109 |
| Msa0142460 | MtrunA17_Chr2g0284461 | 26.942 | 412 | 260 | 12 | 5 | 399 | 287 | 674 | 3.39e-25 | 108 |
| Msa0142460 | MtrunA17_Chr1g0177301 | 27.007 | 411 | 261 | 14 | 8 | 403 | 4 | 390 | 1.46e-24 | 104 |
| Msa0142460 | MtrunA17_Chr1g0199321 | 26.810 | 373 | 234 | 11 | 10 | 366 | 247 | 596 | 1.68e-23 | 103 |
| Msa0142460 | MtrunA17_Chr4g0013091 | 26.764 | 411 | 258 | 15 | 8 | 399 | 311 | 697 | 8.06e-23 | 101 |
| Msa0142460 | MtrunA17_Chr7g0275081 | 27.569 | 399 | 254 | 15 | 11 | 399 | 79 | 452 | 2.69e-20 | 92.8 |
| Msa0142460 | MtrunA17_Chr5g0437411 | 25.722 | 381 | 222 | 15 | 6 | 354 | 289 | 640 | 1.99e-19 | 90.9 |
| Msa0142460 | MtrunA17_Chr4g0059201 | 57.812 | 64 | 27 | 0 | 11 | 74 | 320 | 383 | 4.63e-18 | 86.7 |
| Msa0142460 | MtrunA17_Chr7g0234671 | 25.187 | 401 | 268 | 11 | 8 | 400 | 76 | 452 | 3.30e-17 | 83.2 |
| Msa0142460 | MtrunA17_Chr7g0261371 | 45.000 | 80 | 42 | 1 | 8 | 87 | 239 | 316 | 6.45e-17 | 83.2 |
| Msa0142460 | MtrunA17_Chr3g0122721 | 36.879 | 141 | 72 | 6 | 11 | 144 | 281 | 411 | 6.83e-17 | 83.2 |
| Msa0142460 | MtrunA17_Chr7g0248251 | 24.363 | 353 | 236 | 10 | 8 | 354 | 272 | 599 | 8.07e-17 | 82.8 |
| Msa0142460 | MtrunA17_Chr5g0413681 | 55.556 | 63 | 28 | 0 | 14 | 76 | 284 | 346 | 1.57e-16 | 82.0 |
| Msa0142460 | MtrunA17_Chr1g0183781 | 43.478 | 69 | 39 | 0 | 8 | 76 | 239 | 307 | 1.19e-15 | 79.3 |
| Msa0142460 | MtrunA17_Chr4g0048811 | 43.836 | 73 | 40 | 1 | 6 | 77 | 1 | 73 | 6.73e-15 | 75.5 |
| Msa0142460 | MtrunA17_Chr3g0117851 | 50.000 | 64 | 32 | 0 | 11 | 74 | 276 | 339 | 9.38e-15 | 76.3 |
| Msa0142460 | MtrunA17_Chr2g0280671 | 26.250 | 400 | 242 | 15 | 14 | 399 | 19 | 379 | 1.43e-13 | 72.0 |
| Msa0142460 | MtrunA17_Chr1g0189811 | 25.418 | 299 | 178 | 10 | 4 | 284 | 57 | 328 | 5.24e-13 | 70.5 |
| Msa0142460 | MtrunA17_Chr3g0106931 | 41.667 | 72 | 42 | 0 | 8 | 79 | 231 | 302 | 1.51e-12 | 69.7 |
| Msa0142460 | MtrunA17_Chr1g0198984 | 49.123 | 57 | 29 | 0 | 23 | 79 | 1 | 57 | 1.61e-12 | 63.9 |
| Msa0142460 | MtrunA17_Chr3g0130281 | 28.514 | 249 | 124 | 10 | 8 | 243 | 8 | 215 | 2.02e-12 | 67.4 |
| Msa0142460 | MtrunA17_Chr7g0275961 | 44.615 | 65 | 36 | 0 | 14 | 78 | 259 | 323 | 2.69e-12 | 68.9 |
| Msa0142460 | MtrunA17_Chr8g0373031 | 43.478 | 69 | 39 | 0 | 8 | 76 | 273 | 341 | 5.54e-12 | 67.8 |
| Msa0142460 | MtrunA17_Chr7g0247831 | 42.424 | 66 | 38 | 0 | 11 | 76 | 827 | 892 | 1.01e-11 | 67.0 |
| Msa0142460 | MtrunA17_Chr8g0377151 | 35.632 | 87 | 52 | 2 | 11 | 97 | 283 | 365 | 1.49e-11 | 66.6 |
| Msa0142460 | MtrunA17_Chr1g0196911 | 45.714 | 70 | 35 | 2 | 11 | 78 | 507 | 575 | 2.34e-11 | 66.2 |
| Msa0142460 | MtrunA17_Chr8g0346441 | 41.538 | 65 | 38 | 0 | 14 | 78 | 263 | 327 | 4.54e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142460 | AT5G64660.1 | 54.651 | 430 | 174 | 7 | 1 | 419 | 1 | 420 | 1.19e-145 | 421 |
| Msa0142460 | AT5G09800.1 | 53.791 | 422 | 179 | 7 | 1 | 419 | 1 | 409 | 4.82e-136 | 396 |
| Msa0142460 | AT3G18710.1 | 49.883 | 429 | 191 | 10 | 1 | 419 | 1 | 415 | 3.08e-130 | 382 |
| Msa0142460 | AT3G19380.1 | 29.082 | 392 | 248 | 10 | 5 | 384 | 9 | 382 | 5.10e-37 | 140 |
| Msa0142460 | AT5G65920.1 | 29.563 | 389 | 248 | 10 | 10 | 397 | 60 | 423 | 3.69e-35 | 135 |
| Msa0142460 | AT5G65920.2 | 29.563 | 389 | 248 | 10 | 10 | 397 | 60 | 423 | 3.69e-35 | 135 |
| Msa0142460 | AT2G35930.1 | 27.500 | 400 | 263 | 10 | 8 | 398 | 10 | 391 | 8.83e-35 | 133 |
| Msa0142460 | AT1G66160.1 | 26.485 | 404 | 262 | 13 | 4 | 398 | 27 | 404 | 4.84e-34 | 132 |
| Msa0142460 | AT3G49810.1 | 29.487 | 390 | 247 | 12 | 10 | 397 | 64 | 427 | 3.65e-33 | 130 |
| Msa0142460 | AT1G49780.1 | 27.700 | 426 | 284 | 11 | 5 | 419 | 9 | 421 | 5.06e-32 | 126 |
| Msa0142460 | AT3G52450.1 | 25.882 | 425 | 267 | 12 | 8 | 398 | 5 | 415 | 1.57e-30 | 122 |
| Msa0142460 | AT1G23030.1 | 25.432 | 405 | 263 | 14 | 8 | 405 | 239 | 611 | 1.80e-27 | 115 |
| Msa0142460 | AT2G28830.1 | 26.392 | 413 | 253 | 14 | 11 | 403 | 185 | 566 | 2.19e-27 | 114 |
| Msa0142460 | AT3G46510.1 | 25.791 | 411 | 240 | 15 | 10 | 396 | 256 | 625 | 1.12e-26 | 113 |
| Msa0142460 | AT5G37490.1 | 25.610 | 410 | 269 | 12 | 8 | 403 | 29 | 416 | 3.71e-26 | 110 |
| Msa0142460 | AT3G54850.1 | 27.195 | 353 | 228 | 9 | 10 | 354 | 248 | 579 | 6.01e-25 | 107 |
| Msa0142460 | AT1G71020.2 | 26.150 | 413 | 258 | 17 | 8 | 403 | 93 | 475 | 1.54e-24 | 105 |
| Msa0142460 | AT1G71020.1 | 26.150 | 413 | 258 | 17 | 8 | 403 | 241 | 623 | 3.60e-24 | 105 |
| Msa0142460 | AT1G66160.2 | 24.752 | 404 | 253 | 14 | 4 | 398 | 27 | 388 | 4.19e-24 | 103 |
| Msa0142460 | AT5G42340.1 | 26.786 | 280 | 181 | 8 | 8 | 283 | 288 | 547 | 7.76e-22 | 98.6 |
| Msa0142460 | AT3G11840.1 | 26.196 | 439 | 254 | 16 | 8 | 396 | 8 | 426 | 1.29e-21 | 97.1 |
| Msa0142460 | AT1G29340.1 | 25.592 | 422 | 270 | 15 | 5 | 408 | 300 | 695 | 2.14e-20 | 94.4 |
| Msa0142460 | AT5G01830.1 | 52.239 | 67 | 32 | 0 | 10 | 76 | 274 | 340 | 8.24e-19 | 89.4 |
| Msa0142460 | AT4G21350.1 | 24.745 | 392 | 253 | 13 | 6 | 389 | 1 | 358 | 1.67e-18 | 87.0 |
| Msa0142460 | AT3G54790.2 | 34.653 | 101 | 58 | 1 | 8 | 100 | 200 | 300 | 2.99e-17 | 84.7 |
| Msa0142460 | AT3G54790.3 | 34.653 | 101 | 58 | 1 | 8 | 100 | 236 | 336 | 4.07e-17 | 84.3 |
| Msa0142460 | AT3G54790.1 | 34.653 | 101 | 58 | 1 | 8 | 100 | 236 | 336 | 4.07e-17 | 84.3 |
| Msa0142460 | AT3G07360.1 | 24.586 | 362 | 235 | 14 | 8 | 355 | 72 | 409 | 1.80e-15 | 78.6 |
| Msa0142460 | AT1G67530.3 | 35.644 | 101 | 60 | 2 | 11 | 111 | 273 | 368 | 3.52e-13 | 71.6 |
| Msa0142460 | AT1G01660.1 | 42.466 | 73 | 42 | 0 | 4 | 76 | 491 | 563 | 3.56e-13 | 71.6 |
| Msa0142460 | AT1G01660.2 | 42.466 | 73 | 42 | 0 | 4 | 76 | 492 | 564 | 3.86e-13 | 71.6 |
| Msa0142460 | AT1G67530.2 | 35.644 | 101 | 60 | 2 | 11 | 111 | 273 | 368 | 4.78e-13 | 71.6 |
| Msa0142460 | AT1G67530.1 | 35.644 | 101 | 60 | 2 | 11 | 111 | 273 | 368 | 4.78e-13 | 71.6 |
| Msa0142460 | AT1G67530.4 | 35.644 | 101 | 60 | 2 | 11 | 111 | 273 | 368 | 4.78e-13 | 71.6 |
| Msa0142460 | AT1G10560.1 | 24.242 | 363 | 225 | 13 | 16 | 354 | 294 | 630 | 4.80e-13 | 71.6 |
| Msa0142460 | AT1G27910.1 | 40.230 | 87 | 48 | 2 | 11 | 97 | 280 | 362 | 6.19e-13 | 71.2 |
| Msa0142460 | AT5G18320.1 | 24.138 | 290 | 208 | 6 | 8 | 295 | 70 | 349 | 1.12e-12 | 69.7 |
| Msa0142460 | AT1G60190.1 | 23.810 | 357 | 239 | 10 | 14 | 355 | 282 | 620 | 1.22e-12 | 70.1 |
| Msa0142460 | AT1G24330.1 | 34.545 | 110 | 67 | 3 | 11 | 120 | 276 | 380 | 1.23e-12 | 70.5 |
| Msa0142460 | AT1G24330.2 | 34.545 | 110 | 67 | 3 | 11 | 120 | 276 | 380 | 1.23e-12 | 70.5 |
| Msa0142460 | AT5G18330.1 | 23.120 | 359 | 243 | 11 | 8 | 358 | 63 | 396 | 2.62e-12 | 68.6 |
| Msa0142460 | AT2G23140.1 | 44.444 | 63 | 35 | 0 | 14 | 76 | 237 | 299 | 1.43e-11 | 67.0 |
| Msa0142460 | AT2G23140.2 | 44.444 | 63 | 35 | 0 | 14 | 76 | 234 | 296 | 1.54e-11 | 67.0 |
| Msa0142460 | AT2G23140.4 | 44.444 | 63 | 35 | 0 | 14 | 76 | 234 | 296 | 1.54e-11 | 67.0 |
| Msa0142460 | AT2G23140.3 | 44.444 | 63 | 35 | 0 | 14 | 76 | 45 | 107 | 1.96e-11 | 66.2 |
| Msa0142460 | AT2G23140.5 | 44.444 | 63 | 35 | 0 | 14 | 76 | 45 | 107 | 1.96e-11 | 66.2 |
Find 83 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCATAATATGAGTAGTTT+TGG | 0.313107 | 1_4:-1386601 | None:intergenic |
| GGAGGGATTCGTGTGCGTTC+TGG | 0.338842 | 1_4:+1385789 | Msa0142460:CDS |
| ACGAAAGTGCGTTCTCCATT+AGG | 0.348641 | 1_4:-1386131 | None:intergenic |
| GAAACGGAACAAGGCGAAAC+TGG | 0.354390 | 1_4:+1386176 | Msa0142460:CDS |
| TCACCGTTCCGAGTTTATTC+CGG | 0.356758 | 1_4:+1385392 | Msa0142460:CDS |
| AATCAAAATCAAAATCAAAA+TGG | 0.359583 | 1_4:-1386621 | None:intergenic |
| GGTTGTTATTGCGTTGGATT+TGG | 0.360751 | 1_4:+1385870 | Msa0142460:CDS |
| TTCATGACGTCGAGGGAAAT+AGG | 0.377245 | 1_4:-1385418 | None:intergenic |
| AACTCGGTGACGCCGTTAGA+AGG | 0.386589 | 1_4:-1386230 | None:intergenic |
| GGAGAACGCACTTTCGTGTT+TGG | 0.389136 | 1_4:+1386137 | Msa0142460:CDS |
| TCGGTGTATAACGGAGATTC+CGG | 0.396983 | 1_4:-1385628 | None:intergenic |
| GCACACGAATCCCTCCGTTT+TGG | 0.409841 | 1_4:-1385782 | None:intergenic |
| AGCGCCGTCGTGTGTGGTGG+CGG | 0.420683 | 1_4:+1386335 | Msa0142460:CDS |
| CCAAGGATTTCGTTCCGAAC+CGG | 0.425782 | 1_4:+1385548 | Msa0142460:CDS |
| GAACCGAATCGGACCAGATC+TGG | 0.426727 | 1_4:-1385588 | None:intergenic |
| GACTCGGTGGCGAACCGAAT+CGG | 0.451818 | 1_4:-1385599 | None:intergenic |
| TTATCTATTTCGTGATCAAA+AGG | 0.458454 | 1_4:+1386431 | Msa0142460:CDS |
| CGCGTGCTCCGTCGCTGCGG+TGG | 0.462131 | 1_4:-1386385 | None:intergenic |
| TTGAGTCAGGTAGTGAGAAC+CGG | 0.463717 | 1_4:+1385695 | Msa0142460:CDS |
| GAGTGTGGAATTGCTTGAAC+AGG | 0.467131 | 1_4:+1385849 | Msa0142460:CDS |
| CATCCAGATCTGGTCCGATT+CGG | 0.468264 | 1_4:+1385585 | Msa0142460:CDS |
| ATCCAACGCTGGCTCGATAA+CGG | 0.470884 | 1_4:+1385487 | Msa0142460:CDS |
| ATTAGGTTCTGATCTTTCTC+CGG | 0.473675 | 1_4:-1386114 | None:intergenic |
| CCGGTTCGGAACGAAATCCT+TGG | 0.487110 | 1_4:-1385548 | None:intergenic |
| AGCCTCTGTAACGTCCGGTT+CGG | 0.488322 | 1_4:-1385562 | None:intergenic |
| GGAGAAAGATCAGAACCTAA+TGG | 0.501306 | 1_4:+1386116 | Msa0142460:CDS |
| TACAGAGGCTCATCCAGATC+TGG | 0.511051 | 1_4:+1385575 | Msa0142460:CDS |
| TAGCAATCTCAACGTCGAAA+CGG | 0.512266 | 1_4:+1386160 | Msa0142460:CDS |
| GGTGTTGAAACTTATAGAAA+CGG | 0.512499 | 1_4:+1386275 | Msa0142460:CDS |
| ACGGTGTCGTCGACAAAGGA+AGG | 0.515605 | 1_4:+1386294 | Msa0142460:CDS |
| TACCGTTATCGAGCCAGCGT+TGG | 0.518220 | 1_4:-1385489 | None:intergenic |
| TTTCTTGATAATGTTGATGG+AGG | 0.529867 | 1_4:+1385817 | Msa0142460:CDS |
| CTCAACGTCGAAACGGAACA+AGG | 0.536307 | 1_4:+1386167 | Msa0142460:CDS |
| AGAAACGGTGTCGTCGACAA+AGG | 0.541994 | 1_4:+1386290 | Msa0142460:CDS |
| GGATGAGCCTCTGTAACGTC+CGG | 0.544595 | 1_4:-1385567 | None:intergenic |
| TCAACAGACTCGGTGTATAA+CGG | 0.556543 | 1_4:-1385637 | None:intergenic |
| TGAACAGGTTGTTATTGCGT+TGG | 0.556947 | 1_4:+1385864 | Msa0142460:CDS |
| TGAAGAATCTGCATAGTGGC+GGG | 0.558784 | 1_4:-1385523 | None:intergenic |
| AGTCGCTTGTGAAAATTGTA+CGG | 0.565379 | 1_4:+1385722 | Msa0142460:CDS |
| GAGATTCCGGCGAGTCGACT+CGG | 0.566820 | 1_4:-1385615 | None:intergenic |
| GGTCTTCTCGAACCTTCTAA+CGG | 0.571682 | 1_4:+1386218 | Msa0142460:CDS |
| CCTCGACGTCATGAAATCTC+CGG | 0.572480 | 1_4:+1385426 | Msa0142460:CDS |
| GAAAGTATCCACCGCAGCGA+CGG | 0.573216 | 1_4:+1386377 | Msa0142460:CDS |
| GAGTTTATGTGTTTCTGTGA+CGG | 0.574001 | 1_4:+1386248 | Msa0142460:CDS |
| ACTCCGGTGCAGAGACTCAC+CGG | 0.580529 | 1_4:-1385445 | None:intergenic |
| GGTGTTGAAATTCATAGCGG+TGG | 0.581421 | 1_4:+1386023 | Msa0142460:CDS |
| CGGAGATTTCATGACGTCGA+GGG | 0.581997 | 1_4:-1385425 | None:intergenic |
| ATGCGAAGCGCCGTCGTGTG+TGG | 0.582842 | 1_4:+1386329 | Msa0142460:CDS |
| GTCGACAAAGGAAGGGAGGT+CGG | 0.586477 | 1_4:+1386302 | Msa0142460:CDS |
| TGGAGGAGTTGAACAGAGTG+TGG | 0.586843 | 1_4:+1385834 | Msa0142460:CDS |
| CGAAGCGCCGTCGTGTGTGG+TGG | 0.591962 | 1_4:+1386332 | Msa0142460:CDS |
| GGTTCATCTCGGAGCAGTGA+AGG | 0.592190 | 1_4:+1386197 | Msa0142460:CDS |
| GAAGCTGTTACGAAAGCGAA+TGG | 0.592982 | 1_4:+1386459 | Msa0142460:CDS |
| ACAGACATTTGACGAACTTG+TGG | 0.593505 | 1_4:-1386522 | None:intergenic |
| AAGGCGAAACTGGTTCATCT+CGG | 0.598473 | 1_4:+1386186 | Msa0142460:CDS |
| TCGCCACCGAGTCGACTCGC+CGG | 0.598739 | 1_4:+1385609 | Msa0142460:CDS |
| GGTTTGAAGAATCTGCATAG+TGG | 0.603561 | 1_4:-1385527 | None:intergenic |
| TTGGATACTTGAACGGTCGT+AGG | 0.604139 | 1_4:-1385470 | None:intergenic |
| ATGTGTTTCTGTGACGGAGA+AGG | 0.608428 | 1_4:+1386254 | Msa0142460:CDS |
| TCTCCGGTGAGTCTCTGCAC+CGG | 0.610333 | 1_4:+1385442 | Msa0142460:CDS |
| TTGATTCTTGTTCTTCAACA+AGG | 0.611383 | 1_4:+1385970 | Msa0142460:CDS |
| TTGAAGAATCTGCATAGTGG+CGG | 0.623643 | 1_4:-1385524 | None:intergenic |
| CACCGCAGCGACGGAGCACG+CGG | 0.624475 | 1_4:+1386386 | Msa0142460:CDS |
| AACCGCGTGCTCCGTCGCTG+CGG | 0.626410 | 1_4:-1386388 | None:intergenic |
| TATGCAGATTCTTCAAACCA+AGG | 0.633645 | 1_4:+1385531 | Msa0142460:CDS |
| TTCCGAACCGGACGTTACAG+AGG | 0.635065 | 1_4:+1385560 | Msa0142460:CDS |
| ATAGGACACCGGAATAAACT+CGG | 0.640762 | 1_4:-1385400 | None:intergenic |
| ATCACGTCTATCAACAGACT+CGG | 0.644157 | 1_4:-1385647 | None:intergenic |
| GGTGGCGGCGATAGTTAACA+AGG | 0.648696 | 1_4:+1386350 | Msa0142460:CDS |
| TGAACGGTCGTAGGTAACTC+CGG | 0.649804 | 1_4:-1385461 | None:intergenic |
| GTCACAGAAACACATAAACT+CGG | 0.652220 | 1_4:-1386246 | None:intergenic |
| GCCAGCGTTGGATACTTGAA+CGG | 0.652606 | 1_4:-1385477 | None:intergenic |
| ACCGTTCAAGTATCCAACGC+TGG | 0.658519 | 1_4:+1385476 | Msa0142460:CDS |
| ATCGCCGCCACCACACACGA+CGG | 0.660437 | 1_4:-1386339 | None:intergenic |
| CGGTGTCGTCGACAAAGGAA+GGG | 0.661079 | 1_4:+1386295 | Msa0142460:CDS |
| ACACCGGAATAAACTCGGAA+CGG | 0.672519 | 1_4:-1385395 | None:intergenic |
| CCGGAGATTTCATGACGTCG+AGG | 0.678266 | 1_4:-1385426 | None:intergenic |
| AGCACGCGGTTACAATACTG+TGG | 0.681709 | 1_4:+1386400 | Msa0142460:CDS |
| ATTCCGGCGAGTCGACTCGG+TGG | 0.696812 | 1_4:-1385612 | None:intergenic |
| TGTCGTCGACAAAGGAAGGG+AGG | 0.709533 | 1_4:+1386298 | Msa0142460:CDS |
| ATTGCTCAATCAAATCACGC+CGG | 0.719116 | 1_4:+1386095 | Msa0142460:CDS |
| CGTCGAGGGAAATAGGACAC+CGG | 0.731507 | 1_4:-1385411 | None:intergenic |
| TAGGGTGTTGAAATTCATAG+CGG | 0.751361 | 1_4:+1386020 | Msa0142460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTCTTGATAATGTTGA+TGG | + | chr1_4:1385814-1385833 | Msa0142460:CDS | 25.0% |
| ! | TTATCTATTTCGTGATCAAA+AGG | + | chr1_4:1386431-1386450 | Msa0142460:CDS | 25.0% |
| !!! | AGTTTTCTTGATAATGTTGA+TGG | + | chr1_4:1385814-1385833 | Msa0142460:CDS | 25.0% |
| ! | TTATCTATTTCGTGATCAAA+AGG | + | chr1_4:1386431-1386450 | Msa0142460:CDS | 25.0% |
| ! | TGAAGAGAATTGTGTTTTTC+TGG | + | chr1_4:1385759-1385778 | Msa0142460:CDS | 30.0% |
| !! | TTTCTTGATAATGTTGATGG+AGG | + | chr1_4:1385817-1385836 | Msa0142460:CDS | 30.0% |
| TTGATTCTTGTTCTTCAACA+AGG | + | chr1_4:1385970-1385989 | Msa0142460:CDS | 30.0% | |
| TTGCGAATCAAAAATTGCAT+CGG | + | chr1_4:1385996-1386015 | Msa0142460:CDS | 30.0% | |
| !! | AATCAAAAATTGCATCGGTT+AGG | + | chr1_4:1386001-1386020 | Msa0142460:CDS | 30.0% |
| !! | ATCAAAAATTGCATCGGTTA+GGG | + | chr1_4:1386002-1386021 | Msa0142460:CDS | 30.0% |
| ! | GGTGTTGAAACTTATAGAAA+CGG | + | chr1_4:1386275-1386294 | Msa0142460:CDS | 30.0% |
| ! | TGGCATAATATGAGTAGTTT+TGG | - | chr1_4:1386604-1386623 | None:intergenic | 30.0% |
| ! | TGAAGAGAATTGTGTTTTTC+TGG | + | chr1_4:1385759-1385778 | Msa0142460:CDS | 30.0% |
| !! | TTTCTTGATAATGTTGATGG+AGG | + | chr1_4:1385817-1385836 | Msa0142460:CDS | 30.0% |
| TTGATTCTTGTTCTTCAACA+AGG | + | chr1_4:1385970-1385989 | Msa0142460:CDS | 30.0% | |
| TTGCGAATCAAAAATTGCAT+CGG | + | chr1_4:1385996-1386015 | Msa0142460:CDS | 30.0% | |
| !! | AATCAAAAATTGCATCGGTT+AGG | + | chr1_4:1386001-1386020 | Msa0142460:CDS | 30.0% |
| !! | ATCAAAAATTGCATCGGTTA+GGG | + | chr1_4:1386002-1386021 | Msa0142460:CDS | 30.0% |
| ! | GGTGTTGAAACTTATAGAAA+CGG | + | chr1_4:1386275-1386294 | Msa0142460:CDS | 30.0% |
| ! | TGGCATAATATGAGTAGTTT+TGG | - | chr1_4:1386604-1386623 | None:intergenic | 30.0% |
| TATGCAGATTCTTCAAACCA+AGG | + | chr1_4:1385531-1385550 | Msa0142460:CDS | 35.0% | |
| AGTCGCTTGTGAAAATTGTA+CGG | + | chr1_4:1385722-1385741 | Msa0142460:CDS | 35.0% | |
| !! | TTGTGTTTTTCTGGCCAAAA+CGG | + | chr1_4:1385768-1385787 | Msa0142460:CDS | 35.0% |
| !! | ATCGATTTTGAAGAGCAAGA+AGG | + | chr1_4:1385918-1385937 | Msa0142460:CDS | 35.0% |
| !! | TAGGGTGTTGAAATTCATAG+CGG | + | chr1_4:1386020-1386039 | Msa0142460:CDS | 35.0% |
| CTTCTAGTAGCTGAAAAAGA+AGG | + | chr1_4:1386060-1386079 | Msa0142460:CDS | 35.0% | |
| ! | ATTAGGTTCTGATCTTTCTC+CGG | - | chr1_4:1386117-1386136 | None:intergenic | 35.0% |
| GTCACAGAAACACATAAACT+CGG | - | chr1_4:1386249-1386268 | None:intergenic | 35.0% | |
| ! | GAGTTTATGTGTTTCTGTGA+CGG | + | chr1_4:1386248-1386267 | Msa0142460:CDS | 35.0% |
| TATGCAGATTCTTCAAACCA+AGG | + | chr1_4:1385531-1385550 | Msa0142460:CDS | 35.0% | |
| AGTCGCTTGTGAAAATTGTA+CGG | + | chr1_4:1385722-1385741 | Msa0142460:CDS | 35.0% | |
| !! | TTGTGTTTTTCTGGCCAAAA+CGG | + | chr1_4:1385768-1385787 | Msa0142460:CDS | 35.0% |
| !! | ATCGATTTTGAAGAGCAAGA+AGG | + | chr1_4:1385918-1385937 | Msa0142460:CDS | 35.0% |
| !! | TAGGGTGTTGAAATTCATAG+CGG | + | chr1_4:1386020-1386039 | Msa0142460:CDS | 35.0% |
| CTTCTAGTAGCTGAAAAAGA+AGG | + | chr1_4:1386060-1386079 | Msa0142460:CDS | 35.0% | |
| ! | ATTAGGTTCTGATCTTTCTC+CGG | - | chr1_4:1386117-1386136 | None:intergenic | 35.0% |
| GTCACAGAAACACATAAACT+CGG | - | chr1_4:1386249-1386268 | None:intergenic | 35.0% | |
| ! | GAGTTTATGTGTTTCTGTGA+CGG | + | chr1_4:1386248-1386267 | Msa0142460:CDS | 35.0% |
| ATAGGACACCGGAATAAACT+CGG | - | chr1_4:1385403-1385422 | None:intergenic | 40.0% | |
| TTGAAGAATCTGCATAGTGG+CGG | - | chr1_4:1385527-1385546 | None:intergenic | 40.0% | |
| GGTTTGAAGAATCTGCATAG+TGG | - | chr1_4:1385530-1385549 | None:intergenic | 40.0% | |
| !! | TCAACAGACTCGGTGTATAA+CGG | - | chr1_4:1385640-1385659 | None:intergenic | 40.0% |
| ATCACGTCTATCAACAGACT+CGG | - | chr1_4:1385650-1385669 | None:intergenic | 40.0% | |
| !!! | GCTATCACTGATTTTGAGTC+AGG | + | chr1_4:1385682-1385701 | Msa0142460:CDS | 40.0% |
| ! | TGAACAGGTTGTTATTGCGT+TGG | + | chr1_4:1385864-1385883 | Msa0142460:CDS | 40.0% |
| ! | GGTTGTTATTGCGTTGGATT+TGG | + | chr1_4:1385870-1385889 | Msa0142460:CDS | 40.0% |
| ATTGCTCAATCAAATCACGC+CGG | + | chr1_4:1386095-1386114 | Msa0142460:CDS | 40.0% | |
| GGAGAAAGATCAGAACCTAA+TGG | + | chr1_4:1386116-1386135 | Msa0142460:CDS | 40.0% | |
| TAGCAATCTCAACGTCGAAA+CGG | + | chr1_4:1386160-1386179 | Msa0142460:CDS | 40.0% | |
| ACAGACATTTGACGAACTTG+TGG | - | chr1_4:1386525-1386544 | None:intergenic | 40.0% | |
| ATAGGACACCGGAATAAACT+CGG | - | chr1_4:1385403-1385422 | None:intergenic | 40.0% | |
| TTGAAGAATCTGCATAGTGG+CGG | - | chr1_4:1385527-1385546 | None:intergenic | 40.0% | |
| GGTTTGAAGAATCTGCATAG+TGG | - | chr1_4:1385530-1385549 | None:intergenic | 40.0% | |
| !! | TCAACAGACTCGGTGTATAA+CGG | - | chr1_4:1385640-1385659 | None:intergenic | 40.0% |
| ATCACGTCTATCAACAGACT+CGG | - | chr1_4:1385650-1385669 | None:intergenic | 40.0% | |
| !!! | GCTATCACTGATTTTGAGTC+AGG | + | chr1_4:1385682-1385701 | Msa0142460:CDS | 40.0% |
| ! | TGAACAGGTTGTTATTGCGT+TGG | + | chr1_4:1385864-1385883 | Msa0142460:CDS | 40.0% |
| ! | GGTTGTTATTGCGTTGGATT+TGG | + | chr1_4:1385870-1385889 | Msa0142460:CDS | 40.0% |
| ATTGCTCAATCAAATCACGC+CGG | + | chr1_4:1386095-1386114 | Msa0142460:CDS | 40.0% | |
| GGAGAAAGATCAGAACCTAA+TGG | + | chr1_4:1386116-1386135 | Msa0142460:CDS | 40.0% | |
| TAGCAATCTCAACGTCGAAA+CGG | + | chr1_4:1386160-1386179 | Msa0142460:CDS | 40.0% | |
| ACAGACATTTGACGAACTTG+TGG | - | chr1_4:1386525-1386544 | None:intergenic | 40.0% | |
| TCACCGTTCCGAGTTTATTC+CGG | + | chr1_4:1385392-1385411 | Msa0142460:CDS | 45.0% | |
| ACACCGGAATAAACTCGGAA+CGG | - | chr1_4:1385398-1385417 | None:intergenic | 45.0% | |
| TTCATGACGTCGAGGGAAAT+AGG | - | chr1_4:1385421-1385440 | None:intergenic | 45.0% | |
| TTGGATACTTGAACGGTCGT+AGG | - | chr1_4:1385473-1385492 | None:intergenic | 45.0% | |
| TGAAGAATCTGCATAGTGGC+GGG | - | chr1_4:1385526-1385545 | None:intergenic | 45.0% | |
| ! | TCGGTGTATAACGGAGATTC+CGG | - | chr1_4:1385631-1385650 | None:intergenic | 45.0% |
| TTGAGTCAGGTAGTGAGAAC+CGG | + | chr1_4:1385695-1385714 | Msa0142460:CDS | 45.0% | |
| ! | TTTTCACAAGCGACTCGAAC+CGG | - | chr1_4:1385717-1385736 | None:intergenic | 45.0% |
| !! | TGTTTTTCTGGCCAAAACGG+AGG | + | chr1_4:1385771-1385790 | Msa0142460:CDS | 45.0% |
| !! | GTTTTTCTGGCCAAAACGGA+GGG | + | chr1_4:1385772-1385791 | Msa0142460:CDS | 45.0% |
| GAGTGTGGAATTGCTTGAAC+AGG | + | chr1_4:1385849-1385868 | Msa0142460:CDS | 45.0% | |
| ! | GGTGTTGAAATTCATAGCGG+TGG | + | chr1_4:1386023-1386042 | Msa0142460:CDS | 45.0% |
| ! | ACGAAAGTGCGTTCTCCATT+AGG | - | chr1_4:1386134-1386153 | None:intergenic | 45.0% |
| ! | AAGGCGAAACTGGTTCATCT+CGG | + | chr1_4:1386186-1386205 | Msa0142460:CDS | 45.0% |
| GGTCTTCTCGAACCTTCTAA+CGG | + | chr1_4:1386218-1386237 | Msa0142460:CDS | 45.0% | |
| ! | ATGTGTTTCTGTGACGGAGA+AGG | + | chr1_4:1386254-1386273 | Msa0142460:CDS | 45.0% |
| GAAGCTGTTACGAAAGCGAA+TGG | + | chr1_4:1386459-1386478 | Msa0142460:CDS | 45.0% | |
| TCACCGTTCCGAGTTTATTC+CGG | + | chr1_4:1385392-1385411 | Msa0142460:CDS | 45.0% | |
| ACACCGGAATAAACTCGGAA+CGG | - | chr1_4:1385398-1385417 | None:intergenic | 45.0% | |
| TTCATGACGTCGAGGGAAAT+AGG | - | chr1_4:1385421-1385440 | None:intergenic | 45.0% | |
| TTGGATACTTGAACGGTCGT+AGG | - | chr1_4:1385473-1385492 | None:intergenic | 45.0% | |
| TGAAGAATCTGCATAGTGGC+GGG | - | chr1_4:1385526-1385545 | None:intergenic | 45.0% | |
| ! | TCGGTGTATAACGGAGATTC+CGG | - | chr1_4:1385631-1385650 | None:intergenic | 45.0% |
| TTGAGTCAGGTAGTGAGAAC+CGG | + | chr1_4:1385695-1385714 | Msa0142460:CDS | 45.0% | |
| ! | TTTTCACAAGCGACTCGAAC+CGG | - | chr1_4:1385717-1385736 | None:intergenic | 45.0% |
| !! | TGTTTTTCTGGCCAAAACGG+AGG | + | chr1_4:1385771-1385790 | Msa0142460:CDS | 45.0% |
| !! | GTTTTTCTGGCCAAAACGGA+GGG | + | chr1_4:1385772-1385791 | Msa0142460:CDS | 45.0% |
| GAGTGTGGAATTGCTTGAAC+AGG | + | chr1_4:1385849-1385868 | Msa0142460:CDS | 45.0% | |
| ! | GGTGTTGAAATTCATAGCGG+TGG | + | chr1_4:1386023-1386042 | Msa0142460:CDS | 45.0% |
| ! | ACGAAAGTGCGTTCTCCATT+AGG | - | chr1_4:1386134-1386153 | None:intergenic | 45.0% |
| ! | AAGGCGAAACTGGTTCATCT+CGG | + | chr1_4:1386186-1386205 | Msa0142460:CDS | 45.0% |
| GGTCTTCTCGAACCTTCTAA+CGG | + | chr1_4:1386218-1386237 | Msa0142460:CDS | 45.0% | |
| ! | ATGTGTTTCTGTGACGGAGA+AGG | + | chr1_4:1386254-1386273 | Msa0142460:CDS | 45.0% |
| GAAGCTGTTACGAAAGCGAA+TGG | + | chr1_4:1386459-1386478 | Msa0142460:CDS | 45.0% | |
| CGGAGATTTCATGACGTCGA+GGG | - | chr1_4:1385428-1385447 | None:intergenic | 50.0% | |
| CCTCGACGTCATGAAATCTC+CGG | + | chr1_4:1385426-1385445 | Msa0142460:CDS | 50.0% | |
| TGAACGGTCGTAGGTAACTC+CGG | - | chr1_4:1385464-1385483 | None:intergenic | 50.0% | |
| ACCGTTCAAGTATCCAACGC+TGG | + | chr1_4:1385476-1385495 | Msa0142460:CDS | 50.0% | |
| ! | GCCAGCGTTGGATACTTGAA+CGG | - | chr1_4:1385480-1385499 | None:intergenic | 50.0% |
| !! | ATCCAACGCTGGCTCGATAA+CGG | + | chr1_4:1385487-1385506 | Msa0142460:CDS | 50.0% |
| CCAAGGATTTCGTTCCGAAC+CGG | + | chr1_4:1385548-1385567 | Msa0142460:CDS | 50.0% | |
| TACAGAGGCTCATCCAGATC+TGG | + | chr1_4:1385575-1385594 | Msa0142460:CDS | 50.0% | |
| CATCCAGATCTGGTCCGATT+CGG | + | chr1_4:1385585-1385604 | Msa0142460:CDS | 50.0% | |
| TGGAGGAGTTGAACAGAGTG+TGG | + | chr1_4:1385834-1385853 | Msa0142460:CDS | 50.0% | |
| GGAGAACGCACTTTCGTGTT+TGG | + | chr1_4:1386137-1386156 | Msa0142460:CDS | 50.0% | |
| CTCAACGTCGAAACGGAACA+AGG | + | chr1_4:1386167-1386186 | Msa0142460:CDS | 50.0% | |
| GAAACGGAACAAGGCGAAAC+TGG | + | chr1_4:1386176-1386195 | Msa0142460:CDS | 50.0% | |
| !! | AGAAACGGTGTCGTCGACAA+AGG | + | chr1_4:1386290-1386309 | Msa0142460:CDS | 50.0% |
| AGCACGCGGTTACAATACTG+TGG | + | chr1_4:1386400-1386419 | Msa0142460:CDS | 50.0% | |
| CGGAGATTTCATGACGTCGA+GGG | - | chr1_4:1385428-1385447 | None:intergenic | 50.0% | |
| CCTCGACGTCATGAAATCTC+CGG | + | chr1_4:1385426-1385445 | Msa0142460:CDS | 50.0% | |
| TGAACGGTCGTAGGTAACTC+CGG | - | chr1_4:1385464-1385483 | None:intergenic | 50.0% | |
| ACCGTTCAAGTATCCAACGC+TGG | + | chr1_4:1385476-1385495 | Msa0142460:CDS | 50.0% | |
| ! | GCCAGCGTTGGATACTTGAA+CGG | - | chr1_4:1385480-1385499 | None:intergenic | 50.0% |
| !! | ATCCAACGCTGGCTCGATAA+CGG | + | chr1_4:1385487-1385506 | Msa0142460:CDS | 50.0% |
| CCAAGGATTTCGTTCCGAAC+CGG | + | chr1_4:1385548-1385567 | Msa0142460:CDS | 50.0% | |
| TACAGAGGCTCATCCAGATC+TGG | + | chr1_4:1385575-1385594 | Msa0142460:CDS | 50.0% | |
| CATCCAGATCTGGTCCGATT+CGG | + | chr1_4:1385585-1385604 | Msa0142460:CDS | 50.0% | |
| TGGAGGAGTTGAACAGAGTG+TGG | + | chr1_4:1385834-1385853 | Msa0142460:CDS | 50.0% | |
| GGAGAACGCACTTTCGTGTT+TGG | + | chr1_4:1386137-1386156 | Msa0142460:CDS | 50.0% | |
| CTCAACGTCGAAACGGAACA+AGG | + | chr1_4:1386167-1386186 | Msa0142460:CDS | 50.0% | |
| GAAACGGAACAAGGCGAAAC+TGG | + | chr1_4:1386176-1386195 | Msa0142460:CDS | 50.0% | |
| !! | AGAAACGGTGTCGTCGACAA+AGG | + | chr1_4:1386290-1386309 | Msa0142460:CDS | 50.0% |
| AGCACGCGGTTACAATACTG+TGG | + | chr1_4:1386400-1386419 | Msa0142460:CDS | 50.0% | |
| CGTCGAGGGAAATAGGACAC+CGG | - | chr1_4:1385414-1385433 | None:intergenic | 55.0% | |
| CCGGAGATTTCATGACGTCG+AGG | - | chr1_4:1385429-1385448 | None:intergenic | 55.0% | |
| TACCGTTATCGAGCCAGCGT+TGG | - | chr1_4:1385492-1385511 | None:intergenic | 55.0% | |
| !! | CCGGTTCGGAACGAAATCCT+TGG | - | chr1_4:1385551-1385570 | None:intergenic | 55.0% |
| TTCCGAACCGGACGTTACAG+AGG | + | chr1_4:1385560-1385579 | Msa0142460:CDS | 55.0% | |
| AGCCTCTGTAACGTCCGGTT+CGG | - | chr1_4:1385565-1385584 | None:intergenic | 55.0% | |
| GGATGAGCCTCTGTAACGTC+CGG | - | chr1_4:1385570-1385589 | None:intergenic | 55.0% | |
| GAACCGAATCGGACCAGATC+TGG | - | chr1_4:1385591-1385610 | None:intergenic | 55.0% | |
| ! | GCACACGAATCCCTCCGTTT+TGG | - | chr1_4:1385785-1385804 | None:intergenic | 55.0% |
| GGTTCATCTCGGAGCAGTGA+AGG | + | chr1_4:1386197-1386216 | Msa0142460:CDS | 55.0% | |
| ! | AACTCGGTGACGCCGTTAGA+AGG | - | chr1_4:1386233-1386252 | None:intergenic | 55.0% |
| !! | ACGGTGTCGTCGACAAAGGA+AGG | + | chr1_4:1386294-1386313 | Msa0142460:CDS | 55.0% |
| !! | CGGTGTCGTCGACAAAGGAA+GGG | + | chr1_4:1386295-1386314 | Msa0142460:CDS | 55.0% |
| TGTCGTCGACAAAGGAAGGG+AGG | + | chr1_4:1386298-1386317 | Msa0142460:CDS | 55.0% | |
| GTCGACAAAGGAAGGGAGGT+CGG | + | chr1_4:1386302-1386321 | Msa0142460:CDS | 55.0% | |
| ! | GGTGGCGGCGATAGTTAACA+AGG | + | chr1_4:1386350-1386369 | Msa0142460:CDS | 55.0% |
| !! | GAAAGTATCCACCGCAGCGA+CGG | + | chr1_4:1386377-1386396 | Msa0142460:CDS | 55.0% |
| CGTCGAGGGAAATAGGACAC+CGG | - | chr1_4:1385414-1385433 | None:intergenic | 55.0% | |
| CCGGAGATTTCATGACGTCG+AGG | - | chr1_4:1385429-1385448 | None:intergenic | 55.0% | |
| TACCGTTATCGAGCCAGCGT+TGG | - | chr1_4:1385492-1385511 | None:intergenic | 55.0% | |
| !! | CCGGTTCGGAACGAAATCCT+TGG | - | chr1_4:1385551-1385570 | None:intergenic | 55.0% |
| TTCCGAACCGGACGTTACAG+AGG | + | chr1_4:1385560-1385579 | Msa0142460:CDS | 55.0% | |
| AGCCTCTGTAACGTCCGGTT+CGG | - | chr1_4:1385565-1385584 | None:intergenic | 55.0% | |
| GGATGAGCCTCTGTAACGTC+CGG | - | chr1_4:1385570-1385589 | None:intergenic | 55.0% | |
| GAACCGAATCGGACCAGATC+TGG | - | chr1_4:1385591-1385610 | None:intergenic | 55.0% | |
| ! | GCACACGAATCCCTCCGTTT+TGG | - | chr1_4:1385785-1385804 | None:intergenic | 55.0% |
| GGTTCATCTCGGAGCAGTGA+AGG | + | chr1_4:1386197-1386216 | Msa0142460:CDS | 55.0% | |
| ! | AACTCGGTGACGCCGTTAGA+AGG | - | chr1_4:1386233-1386252 | None:intergenic | 55.0% |
| !! | ACGGTGTCGTCGACAAAGGA+AGG | + | chr1_4:1386294-1386313 | Msa0142460:CDS | 55.0% |
| !! | CGGTGTCGTCGACAAAGGAA+GGG | + | chr1_4:1386295-1386314 | Msa0142460:CDS | 55.0% |
| TGTCGTCGACAAAGGAAGGG+AGG | + | chr1_4:1386298-1386317 | Msa0142460:CDS | 55.0% | |
| GTCGACAAAGGAAGGGAGGT+CGG | + | chr1_4:1386302-1386321 | Msa0142460:CDS | 55.0% | |
| ! | GGTGGCGGCGATAGTTAACA+AGG | + | chr1_4:1386350-1386369 | Msa0142460:CDS | 55.0% |
| !! | GAAAGTATCCACCGCAGCGA+CGG | + | chr1_4:1386377-1386396 | Msa0142460:CDS | 55.0% |
| TCTCCGGTGAGTCTCTGCAC+CGG | + | chr1_4:1385442-1385461 | Msa0142460:CDS | 60.0% | |
| ACTCCGGTGCAGAGACTCAC+CGG | - | chr1_4:1385448-1385467 | None:intergenic | 60.0% | |
| !! | GACTCGGTGGCGAACCGAAT+CGG | - | chr1_4:1385602-1385621 | None:intergenic | 60.0% |
| GAGATTCCGGCGAGTCGACT+CGG | - | chr1_4:1385618-1385637 | None:intergenic | 60.0% | |
| GGAGGGATTCGTGTGCGTTC+TGG | + | chr1_4:1385789-1385808 | Msa0142460:CDS | 60.0% | |
| TCTCCGGTGAGTCTCTGCAC+CGG | + | chr1_4:1385442-1385461 | Msa0142460:CDS | 60.0% | |
| ACTCCGGTGCAGAGACTCAC+CGG | - | chr1_4:1385448-1385467 | None:intergenic | 60.0% | |
| !! | GACTCGGTGGCGAACCGAAT+CGG | - | chr1_4:1385602-1385621 | None:intergenic | 60.0% |
| GAGATTCCGGCGAGTCGACT+CGG | - | chr1_4:1385618-1385637 | None:intergenic | 60.0% | |
| GGAGGGATTCGTGTGCGTTC+TGG | + | chr1_4:1385789-1385808 | Msa0142460:CDS | 60.0% | |
| !! | ATTCCGGCGAGTCGACTCGG+TGG | - | chr1_4:1385615-1385634 | None:intergenic | 65.0% |
| !! | ATGCGAAGCGCCGTCGTGTG+TGG | + | chr1_4:1386329-1386348 | Msa0142460:CDS | 65.0% |
| ATCGCCGCCACCACACACGA+CGG | - | chr1_4:1386342-1386361 | None:intergenic | 65.0% | |
| !! | ATTCCGGCGAGTCGACTCGG+TGG | - | chr1_4:1385615-1385634 | None:intergenic | 65.0% |
| !! | ATGCGAAGCGCCGTCGTGTG+TGG | + | chr1_4:1386329-1386348 | Msa0142460:CDS | 65.0% |
| ATCGCCGCCACCACACACGA+CGG | - | chr1_4:1386342-1386361 | None:intergenic | 65.0% | |
| !! | TCGCCACCGAGTCGACTCGC+CGG | + | chr1_4:1385609-1385628 | Msa0142460:CDS | 70.0% |
| !! | CGAAGCGCCGTCGTGTGTGG+TGG | + | chr1_4:1386332-1386351 | Msa0142460:CDS | 70.0% |
| AGCGCCGTCGTGTGTGGTGG+CGG | + | chr1_4:1386335-1386354 | Msa0142460:CDS | 70.0% | |
| AACCGCGTGCTCCGTCGCTG+CGG | - | chr1_4:1386391-1386410 | None:intergenic | 70.0% | |
| !! | TCGCCACCGAGTCGACTCGC+CGG | + | chr1_4:1385609-1385628 | Msa0142460:CDS | 70.0% |
| !! | CGAAGCGCCGTCGTGTGTGG+TGG | + | chr1_4:1386332-1386351 | Msa0142460:CDS | 70.0% |
| AGCGCCGTCGTGTGTGGTGG+CGG | + | chr1_4:1386335-1386354 | Msa0142460:CDS | 70.0% | |
| AACCGCGTGCTCCGTCGCTG+CGG | - | chr1_4:1386391-1386410 | None:intergenic | 70.0% | |
| CACCGCAGCGACGGAGCACG+CGG | + | chr1_4:1386386-1386405 | Msa0142460:CDS | 75.0% | |
| CACCGCAGCGACGGAGCACG+CGG | + | chr1_4:1386386-1386405 | Msa0142460:CDS | 75.0% | |
| ! | CGCGTGCTCCGTCGCTGCGG+TGG | - | chr1_4:1386388-1386407 | None:intergenic | 80.0% |
| ! | CGCGTGCTCCGTCGCTGCGG+TGG | - | chr1_4:1386388-1386407 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 1385370 | 1386629 | 1385370 | ID=Msa0142460;Name=Msa0142460 |
| chr1_4 | mRNA | 1385370 | 1386629 | 1385370 | ID=Msa0142460-mRNA-1;Parent=Msa0142460;Name=Msa0142460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|419 |
| chr1_4 | exon | 1385370 | 1386629 | 1385370 | ID=Msa0142460-mRNA-1:exon:429;Parent=Msa0142460-mRNA-1 |
| chr1_4 | CDS | 1385370 | 1386629 | 1385370 | ID=Msa0142460-mRNA-1:cds;Parent=Msa0142460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
