Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1209870 | sp|Q9XFS9|DXR_ARATH | 82.255 | 479 | 78 | 3 | 1 | 475 | 2 | 477 | 0.0 | 790 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1209870 | G7JNV7 | 98.947 | 475 | 5 | 0 | 1 | 475 | 1 | 475 | 0.0 | 968 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa1209870 | 0.834999 | 2.166256e-56 | -8.615850e-47 |
| Msa0002110 | Msa1209870 | 0.815267 | 1.009234e-51 | -8.615850e-47 |
| Msa0029520 | Msa1209870 | 0.807350 | 5.277332e-50 | -8.615850e-47 |
| Msa0065670 | Msa1209870 | 0.807156 | 5.801099e-50 | -8.615850e-47 |
| Msa0067590 | Msa1209870 | 0.806875 | 6.651761e-50 | -8.615850e-47 |
| Msa0075990 | Msa1209870 | 0.810126 | 1.346164e-50 | -8.615850e-47 |
| Msa0081610 | Msa1209870 | 0.827913 | 1.203118e-54 | -8.615850e-47 |
| Msa0093950 | Msa1209870 | 0.832671 | 8.275083e-56 | -8.615850e-47 |
| Msa0094170 | Msa1209870 | 0.816206 | 6.231273e-52 | -8.615850e-47 |
| Msa0095810 | Msa1209870 | 0.811775 | 5.912859e-51 | -8.615850e-47 |
| Msa0111110 | Msa1209870 | 0.834063 | 3.722344e-56 | -8.615850e-47 |
| Msa0112550 | Msa1209870 | 0.803338 | 3.655757e-49 | -8.615850e-47 |
| Msa0113370 | Msa1209870 | 0.815111 | 1.092719e-51 | -8.615850e-47 |
| Msa0605040 | Msa1209870 | 0.817181 | 3.767292e-52 | -8.615850e-47 |
| Msa0605160 | Msa1209870 | 0.811017 | 8.638293e-51 | -8.615850e-47 |
| Msa0638010 | Msa1209870 | 0.851368 | 9.290463e-61 | -8.615850e-47 |
| Msa0654490 | Msa1209870 | 0.840072 | 1.083852e-57 | -8.615850e-47 |
| Msa0686950 | Msa1209870 | 0.808222 | 3.442733e-50 | -8.615850e-47 |
| Msa0833950 | Msa1209870 | 0.801076 | 1.067711e-48 | -8.615850e-47 |
| Msa0841410 | Msa1209870 | 0.820069 | 8.333703e-53 | -8.615850e-47 |
| Msa0138990 | Msa1209870 | 0.812728 | 3.664314e-51 | -8.615850e-47 |
| Msa0140770 | Msa1209870 | 0.838860 | 2.237266e-57 | -8.615850e-47 |
| Msa0154890 | Msa1209870 | 0.804355 | 2.248255e-49 | -8.615850e-47 |
| Msa0168770 | Msa1209870 | 0.819874 | 9.236267e-53 | -8.615850e-47 |
| Msa0173950 | Msa1209870 | 0.810665 | 1.029786e-50 | -8.615850e-47 |
| Msa0178840 | Msa1209870 | 0.800484 | 1.410183e-48 | -8.615850e-47 |
| Msa0187590 | Msa1209870 | 0.835672 | 1.463881e-56 | -8.615850e-47 |
| Msa0220400 | Msa1209870 | 0.838405 | 2.931957e-57 | -8.615850e-47 |
| Msa0225790 | Msa1209870 | 0.801675 | 8.052522e-49 | -8.615850e-47 |
| Msa0374340 | Msa1209870 | 0.805047 | 1.611533e-49 | -8.615850e-47 |
| Msa0374420 | Msa1209870 | 0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0380400 | Msa1209870 | 0.828046 | 1.117325e-54 | -8.615850e-47 |
| Msa0383870 | Msa1209870 | 0.811496 | 6.801349e-51 | -8.615850e-47 |
| Msa0385930 | Msa1209870 | 0.806488 | 8.027649e-50 | -8.615850e-47 |
| Msa0397420 | Msa1209870 | 0.808102 | 3.653076e-50 | -8.615850e-47 |
| Msa0403480 | Msa1209870 | 0.929169 | 1.020891e-92 | -8.615850e-47 |
| Msa0415160 | Msa1209870 | 0.811984 | 5.324390e-51 | -8.615850e-47 |
| Msa0417790 | Msa1209870 | 0.803454 | 3.458739e-49 | -8.615850e-47 |
| Msa0420810 | Msa1209870 | 0.802172 | 6.363935e-49 | -8.615850e-47 |
| Msa0476170 | Msa1209870 | 0.838885 | 2.203945e-57 | -8.615850e-47 |
| Msa0479760 | Msa1209870 | 0.838933 | 2.141979e-57 | -8.615850e-47 |
| Msa0480090 | Msa1209870 | 0.813670 | 2.276224e-51 | -8.615850e-47 |
| Msa0982090 | Msa1209870 | 0.813395 | 2.615774e-51 | -8.615850e-47 |
| Msa1025040 | Msa1209870 | 0.811177 | 7.975517e-51 | -8.615850e-47 |
| Msa1039190 | Msa1209870 | 0.838555 | 2.682162e-57 | -8.615850e-47 |
| Msa1063590 | Msa1209870 | 0.833776 | 4.392063e-56 | -8.615850e-47 |
| Msa1085610 | Msa1209870 | 0.858694 | 6.909557e-63 | -8.615850e-47 |
| Msa0260580 | Msa1209870 | 0.821505 | 3.896817e-53 | -8.615850e-47 |
| Msa0260640 | Msa1209870 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0261660 | Msa1209870 | 0.826757 | 2.277212e-54 | -8.615850e-47 |
| Msa0299530 | Msa1209870 | 0.835946 | 1.248102e-56 | -8.615850e-47 |
| Msa0327990 | Msa1209870 | 0.808711 | 2.707496e-50 | -8.615850e-47 |
| Msa0337710 | Msa1209870 | -0.807550 | 4.785033e-50 | -8.615850e-47 |
| Msa1128610 | Msa1209870 | 0.823850 | 1.109368e-53 | -8.615850e-47 |
| Msa1129300 | Msa1209870 | 0.849005 | 4.267673e-60 | -8.615850e-47 |
| Msa1143810 | Msa1209870 | 0.809715 | 1.649950e-50 | -8.615850e-47 |
| Msa1152780 | Msa1209870 | 0.804535 | 2.062071e-49 | -8.615850e-47 |
| Msa1190100 | Msa1209870 | 0.802852 | 4.608171e-49 | -8.615850e-47 |
| Msa1209870 | Msa1330540 | 0.949122 | 2.408593e-107 | -8.615850e-47 |
| Msa1209870 | Msa1342960 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
| Msa1209870 | Msa1361670 | 0.818830 | 1.597469e-52 | -8.615850e-47 |
| Msa1209870 | Msa1364350 | 0.815172 | 1.059204e-51 | -8.615850e-47 |
| Msa1209870 | Msa1375610 | 0.830276 | 3.217795e-55 | -8.615850e-47 |
| Msa1209870 | Msa1375970 | 0.823299 | 1.492303e-53 | -8.615850e-47 |
| Msa1209870 | Msa1376550 | 0.836449 | 9.295118e-57 | -8.615850e-47 |
| Msa1209870 | Msa1382380 | 0.810192 | 1.302297e-50 | -8.615850e-47 |
| Msa1209870 | Msa1388030 | 0.801937 | 7.114563e-49 | -8.615850e-47 |
| Msa1209870 | Msa1411930 | 0.807614 | 4.637664e-50 | -8.615850e-47 |
| Msa1209870 | Msa1431510 | 0.817122 | 3.884521e-52 | -8.615850e-47 |
| Msa1209870 | Msa1440990 | 0.811413 | 7.090069e-51 | -8.615850e-47 |
| Msa0512950 | Msa1209870 | 0.805057 | 1.603731e-49 | -8.615850e-47 |
| Msa0515440 | Msa1209870 | 0.819309 | 1.242425e-52 | -8.615850e-47 |
| Msa0523430 | Msa1209870 | 0.827370 | 1.624281e-54 | -8.615850e-47 |
| Msa0523490 | Msa1209870 | 0.832682 | 8.221658e-56 | -8.615850e-47 |
| Msa0559450 | Msa1209870 | 0.839836 | 1.248412e-57 | -8.615850e-47 |
| Msa0559650 | Msa1209870 | 0.820991 | 5.119184e-53 | -8.615850e-47 |
| Msa0576020 | Msa1209870 | 0.843359 | 1.471076e-58 | -8.615850e-47 |
| Msa0576080 | Msa1209870 | 0.856140 | 3.934772e-62 | -8.615850e-47 |
| Msa0576120 | Msa1209870 | 0.865621 | 5.170892e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1209870 | MtrunA17_Chr4g0059081 | 98.947 | 475 | 5 | 0 | 1 | 475 | 1 | 475 | 0.0 | 968 |
| Msa1209870 | MtrunA17_Chr8g0339281 | 74.098 | 471 | 118 | 3 | 1 | 469 | 1 | 469 | 0.0 | 725 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1209870 | AT5G62790.1 | 82.255 | 479 | 78 | 3 | 1 | 475 | 2 | 477 | 0.0 | 790 |
| Msa1209870 | AT5G62790.2 | 78.600 | 500 | 79 | 4 | 1 | 475 | 1 | 497 | 0.0 | 779 |
Find 151 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACTCTTGATATCATATT+TGG | 0.060371 | 8_1:-68500336 | Msa1209870:three_prime_UTR |
| ATTGAAGCACATTACTTATT+TGG | 0.150895 | 8_1:-68502002 | Msa1209870:CDS |
| CAAGTCTTGTTACCTAGTTC+TGG | 0.168286 | 8_1:+68504904 | None:intergenic |
| AAGAAAGAACCTGGGAATTT+AGG | 0.189751 | 8_1:+68505144 | None:intergenic |
| TGTTTCCAGGATTAGCTATT+TGG | 0.208608 | 8_1:-68500814 | Msa1209870:intron |
| GGCAATTAGTGTCTCTTTAT+TGG | 0.216981 | 8_1:+68503144 | None:intergenic |
| TTCAATGGCCAAAGAAATTA+AGG | 0.227966 | 8_1:+68500557 | None:intergenic |
| ATAAGAACACTGCACTTTCT+TGG | 0.249835 | 8_1:-68505312 | Msa1209870:five_prime_UTR |
| AAAACATCCCAACTGGAGTA+TGG | 0.276203 | 8_1:-68502159 | Msa1209870:CDS |
| CCAACAATAGAGATGGGTTT+AGG | 0.286621 | 8_1:+68504874 | None:intergenic |
| TTACTCTTGATATCATATTT+GGG | 0.294756 | 8_1:-68500335 | Msa1209870:three_prime_UTR |
| TTCATCTGTTCTTGCACAAT+TGG | 0.303753 | 8_1:-68501808 | Msa1209870:CDS |
| TCATCTGTTCTTGCACAATT+GGG | 0.311960 | 8_1:-68501807 | Msa1209870:CDS |
| GAGCCTAGGCATAGGAGTTT+TGG | 0.326447 | 8_1:-68500376 | Msa1209870:three_prime_UTR |
| GCTTTGAAAAGAAAAGAAAA+TGG | 0.329522 | 8_1:-68505006 | Msa1209870:CDS |
| GCCTATGCTGCTGGCCGCGC+TGG | 0.330237 | 8_1:-68501496 | Msa1209870:CDS |
| ATCCACAATGGATGTGGTTT+CGG | 0.344540 | 8_1:+68505391 | None:intergenic |
| GCGACAACTCTAAACTTATC+TGG | 0.348351 | 8_1:+68504619 | None:intergenic |
| ATCACTGATTTAAGAAGAAT+TGG | 0.353707 | 8_1:-68500631 | Msa1209870:three_prime_UTR |
| AAGTCTTGTTACCTAGTTCT+GGG | 0.362313 | 8_1:+68504905 | None:intergenic |
| CAACAATAGAGATGGGTTTA+GGG | 0.365991 | 8_1:+68504875 | None:intergenic |
| AACCACATCCATTGTGGATT+CGG | 0.367464 | 8_1:-68505387 | Msa1209870:five_prime_UTR |
| GATGTGGTGGTGACAGAAAA+TGG | 0.372835 | 8_1:+68505342 | None:intergenic |
| AGGATTGGCAAACGCATATC+AGG | 0.374634 | 8_1:+68501780 | None:intergenic |
| ATCTCTATTGTTGGATGCAC+TGG | 0.375194 | 8_1:-68504865 | Msa1209870:CDS |
| TGAAAGAGAGGTGAGGGAAA+TGG | 0.396441 | 8_1:+68505481 | None:intergenic |
| TTGTTCTCCCGGGATGATCT+CGG | 0.400011 | 8_1:+68504180 | None:intergenic |
| TTCTTCGCTTCAGTGTATCC+AGG | 0.416692 | 8_1:-68502574 | Msa1209870:intron |
| GTTGGATGCACTGGTTCAAT+TGG | 0.420513 | 8_1:-68504856 | Msa1209870:CDS |
| GCAAACTAGCAGCATATTCT+CGG | 0.421203 | 8_1:+68500694 | None:intergenic |
| ACATCTTTCAGTTTCTCAAC+AGG | 0.421238 | 8_1:+68502200 | None:intergenic |
| CAGGCCATGATAATGTATAA+AGG | 0.421244 | 8_1:+68501760 | None:intergenic |
| GATGGATACTTAATGTTGTC+AGG | 0.430692 | 8_1:+68501529 | None:intergenic |
| TCAATGACGCCTTGTTCTCC+CGG | 0.434922 | 8_1:+68504169 | None:intergenic |
| CAATCCTTTATACATTATCA+TGG | 0.441678 | 8_1:-68501764 | Msa1209870:CDS |
| TGTTCTCCCGGGATGATCTC+GGG | 0.444418 | 8_1:+68504181 | None:intergenic |
| TCCAGCGCGGCCAGCAGCAT+AGG | 0.445154 | 8_1:+68501495 | None:intergenic |
| GTGACAACAGTGACTGCATC+CGG | 0.450389 | 8_1:+68504048 | None:intergenic |
| GATCAGTCTCATGCTAGAAC+AGG | 0.456977 | 8_1:+68500651 | None:intergenic |
| CGCGCTGGAGGAACCATGAC+AGG | 0.460029 | 8_1:-68501481 | Msa1209870:CDS |
| CAAATATGATATCAAGAGTA+AGG | 0.460491 | 8_1:+68500337 | None:intergenic |
| CAGAACTAGGTAACAAGACT+TGG | 0.462516 | 8_1:-68504903 | Msa1209870:CDS |
| ACAGTTGCGGCCATAGAAGC+TGG | 0.466883 | 8_1:-68503184 | Msa1209870:CDS |
| ATTGCTCGTCCTGGCCATGC+TGG | 0.468681 | 8_1:+68504928 | None:intergenic |
| CATTGTATACAATTGTTCAA+TGG | 0.468951 | 8_1:+68500542 | None:intergenic |
| TATGCTGCTGGCCGCGCTGG+AGG | 0.470238 | 8_1:-68501493 | Msa1209870:CDS |
| CACTAGCAGCTGGTAGGAAT+CGG | 0.471313 | 8_1:+68500593 | None:intergenic |
| ATGCATTAAAACATCCCAAC+TGG | 0.473839 | 8_1:-68502166 | Msa1209870:CDS |
| AGAGTTGTCGCACTTGCAGC+TGG | 0.474198 | 8_1:-68504607 | Msa1209870:CDS |
| AAACATCCCAACTGGAGTAT+GGG | 0.476050 | 8_1:-68502158 | Msa1209870:CDS |
| TTTCTTGTTGTGAATTGTGA+TGG | 0.478247 | 8_1:-68505241 | Msa1209870:intron |
| CCTAAACCCATCTCTATTGT+TGG | 0.480547 | 8_1:-68504874 | Msa1209870:CDS |
| CGCTTCACTCCTAAATTCCC+AGG | 0.482124 | 8_1:-68505153 | Msa1209870:intron |
| CATGATAATGTATAAAGGAT+TGG | 0.483281 | 8_1:+68501765 | None:intergenic |
| ATGAATCTTGCCTATGCTGC+TGG | 0.484349 | 8_1:-68501505 | Msa1209870:CDS |
| TCTCCAGCTGAACTTAAGTC+CGG | 0.486037 | 8_1:-68505204 | Msa1209870:CDS |
| AGTAAGGCCTTGAGCATCAA+TGG | 0.486502 | 8_1:+68500353 | None:intergenic |
| GCTTCTATGGCCGCAACTGT+TGG | 0.486636 | 8_1:+68503187 | None:intergenic |
| TTCTCAGGTTGCACGTCACC+CGG | 0.488858 | 8_1:-68504067 | Msa1209870:intron |
| CATCTGTTCTTGCACAATTG+GGG | 0.489816 | 8_1:-68501806 | Msa1209870:CDS |
| AGCAGCATAGGCAAGATTCA+TGG | 0.491274 | 8_1:+68501507 | None:intergenic |
| AGCTGGAAAAGACATAGCTT+TGG | 0.491660 | 8_1:-68503167 | Msa1209870:CDS |
| CGAGTCATTCTAACTGCATC+CGG | 0.492265 | 8_1:-68502528 | Msa1209870:CDS |
| GAGGTGAGGGAAATGGAAAG+TGG | 0.493354 | 8_1:+68505488 | None:intergenic |
| AATTATTCACTATGACTTGT+GGG | 0.496488 | 8_1:-68500718 | Msa1209870:CDS |
| TTTGTATATTTGTGAAAGAG+AGG | 0.498634 | 8_1:+68505469 | None:intergenic |
| GGACCACCACCAGCATGGCC+AGG | 0.499057 | 8_1:-68504937 | Msa1209870:CDS |
| CGGGCAAGAGGAAGGACAAA+AGG | 0.499562 | 8_1:+68503115 | None:intergenic |
| CGTCCTGGCCATGCTGGTGG+TGG | 0.499985 | 8_1:+68504934 | None:intergenic |
| TCTTCGCTTCAGTGTATCCA+GGG | 0.503635 | 8_1:-68502573 | Msa1209870:intron |
| TGTTCAGTGCAGTCAACATC+AGG | 0.504129 | 8_1:-68504958 | Msa1209870:CDS |
| TTCGGACAGCATCAACAGAC+AGG | 0.504682 | 8_1:+68505409 | None:intergenic |
| AGGAAGGACAAAAGGACCTC+CGG | 0.506111 | 8_1:+68503123 | None:intergenic |
| TCAGAACAATAGACTCTGTC+AGG | 0.507170 | 8_1:+68501741 | None:intergenic |
| AGTGAAGCGGTTAGACTTGA+GGG | 0.508591 | 8_1:+68505167 | None:intergenic |
| AATAAAGAGACACTAATTGC+CGG | 0.508829 | 8_1:-68503142 | Msa1209870:CDS |
| TACATACCTAAAAGCACCTC+CGG | 0.511346 | 8_1:+68502509 | None:intergenic |
| AAACCGGACTTAAGTTCAGC+TGG | 0.512666 | 8_1:+68505201 | None:intergenic |
| AGTAGGCTGTGCAGGACTAA+AGG | 0.515160 | 8_1:-68504019 | Msa1209870:intron |
| TATGCCTAGGCTCATATTGT+CGG | 0.516638 | 8_1:+68500386 | None:intergenic |
| TTAAGAAGAATTGGTGGTTG+TGG | 0.517158 | 8_1:-68500622 | Msa1209870:three_prime_UTR |
| AGTTCTGGGATTGCTCGTCC+TGG | 0.518603 | 8_1:+68504919 | None:intergenic |
| ACTGATTTAAGAAGAATTGG+TGG | 0.519427 | 8_1:-68500628 | Msa1209870:three_prime_UTR |
| AAATTATTCACTATGACTTG+TGG | 0.522725 | 8_1:-68500719 | Msa1209870:CDS |
| CATTACTCTTCTGATAGATC+AGG | 0.523314 | 8_1:-68504578 | Msa1209870:intron |
| TTTCTAACAGCAACAAGTTG+TGG | 0.525340 | 8_1:+68504256 | None:intergenic |
| AGCCGAATCCACAATGGATG+TGG | 0.526808 | 8_1:+68505385 | None:intergenic |
| ATTGAATGTATGATTGATTG+TGG | 0.526824 | 8_1:+68501945 | None:intergenic |
| TACTCTTGATATCATATTTG+GGG | 0.527013 | 8_1:-68500334 | Msa1209870:three_prime_UTR |
| ACGGGAATAGTAGGCTGTGC+AGG | 0.536835 | 8_1:-68504027 | Msa1209870:CDS |
| ACATTCAATGATTGAAACAC+AGG | 0.537807 | 8_1:-68501931 | Msa1209870:intron |
| ACTGTTGTCACGGGAATAGT+AGG | 0.538998 | 8_1:-68504036 | Msa1209870:CDS |
| GAGTGAAGCGGTTAGACTTG+AGG | 0.539761 | 8_1:+68505166 | None:intergenic |
| CTGTTCTTGCACAATTGGGG+TGG | 0.541920 | 8_1:-68501803 | Msa1209870:CDS |
| AGGTGAGGGAAATGGAAAGT+GGG | 0.545272 | 8_1:+68505489 | None:intergenic |
| GAGATCATCCCGGGAGAACA+AGG | 0.547340 | 8_1:-68504178 | Msa1209870:CDS |
| GTGCACCCTCTGTTAACCCC+TGG | 0.548422 | 8_1:+68502556 | None:intergenic |
| GGACGAGCAATCCCAGAACT+AGG | 0.548767 | 8_1:-68504916 | Msa1209870:CDS |
| CACTGGTTCAATTGGAACTC+AGG | 0.550266 | 8_1:-68504848 | Msa1209870:intron |
| TATAGAAATAAATTAGAATG+AGG | 0.551961 | 8_1:+68505515 | None:intergenic |
| GATGCAGTCACTGTTGTCAC+GGG | 0.557100 | 8_1:-68504045 | Msa1209870:CDS |
| GCTCGTCCTGGCCATGCTGG+TGG | 0.558823 | 8_1:+68504931 | None:intergenic |
| CAAACTAGCAGCATATTCTC+GGG | 0.558988 | 8_1:+68500695 | None:intergenic |
| AGTGCATCCAACAATAGAGA+TGG | 0.563875 | 8_1:+68504867 | None:intergenic |
| CATAGTGAATAATTTCCTCA+AGG | 0.564756 | 8_1:+68500727 | None:intergenic |
| CAATGACGCCTTGTTCTCCC+GGG | 0.564820 | 8_1:+68504170 | None:intergenic |
| AACATCCCAACTGGAGTATG+GGG | 0.571896 | 8_1:-68502157 | Msa1209870:CDS |
| AAAATGCTAACACTAGCAGC+TGG | 0.572425 | 8_1:+68500583 | None:intergenic |
| TATGCTTTCGGGCAAGAGGA+AGG | 0.576821 | 8_1:+68503107 | None:intergenic |
| GTGAAGCGGTTAGACTTGAG+GGG | 0.577007 | 8_1:+68505168 | None:intergenic |
| GCAGAATGTTCGGAATCAGC+AGG | 0.577993 | 8_1:+68503070 | None:intergenic |
| CTATAAGATCAATAAAATTG+TGG | 0.582103 | 8_1:+68500452 | None:intergenic |
| GGATGCAGTCACTGTTGTCA+CGG | 0.582145 | 8_1:-68504046 | Msa1209870:CDS |
| TGGCCAAAACTCCTATGCCT+AGG | 0.585868 | 8_1:+68500373 | None:intergenic |
| TGCACTAAGAACACCTGTCA+TGG | 0.586245 | 8_1:+68501468 | None:intergenic |
| TATTTGTGAAAGAGAGGTGA+GGG | 0.586401 | 8_1:+68505475 | None:intergenic |
| ATGTGGTGGTGACAGAAAAT+GGG | 0.587730 | 8_1:+68505343 | None:intergenic |
| TCTATTGTTCTGAAGTCACT+TGG | 0.588552 | 8_1:-68501731 | Msa1209870:CDS |
| GACAATATGAGCCTAGGCAT+AGG | 0.590496 | 8_1:-68500384 | Msa1209870:three_prime_UTR |
| ATAGTGAATAATTTCCTCAA+GGG | 0.592245 | 8_1:+68500728 | None:intergenic |
| GTTGACCTCACCTTCCCTTG+AGG | 0.594034 | 8_1:-68500742 | Msa1209870:CDS |
| ACGTTATGCTTTCGGGCAAG+AGG | 0.594225 | 8_1:+68503103 | None:intergenic |
| GTCCGAAACCACATCCATTG+TGG | 0.597252 | 8_1:-68505393 | Msa1209870:five_prime_UTR |
| GTGCATCCAACAATAGAGAT+GGG | 0.604941 | 8_1:+68504868 | None:intergenic |
| CTAGGTAACAAGACTTGGGA+AGG | 0.608965 | 8_1:-68504898 | Msa1209870:CDS |
| GTAACCGACAATATGAGCCT+AGG | 0.612431 | 8_1:-68500390 | Msa1209870:three_prime_UTR |
| TGACAACAGTGACTGCATCC+GGG | 0.616685 | 8_1:+68504049 | None:intergenic |
| CTGGGAATTTAGGAGTGAAG+CGG | 0.620084 | 8_1:+68505154 | None:intergenic |
| TGAATAATTTCCTCAAGGGA+AGG | 0.623968 | 8_1:+68500732 | None:intergenic |
| CTTCGCTTCAGTGTATCCAG+GGG | 0.627252 | 8_1:-68502572 | Msa1209870:intron |
| AATTTCCTCAAGGGAAGGTG+AGG | 0.628083 | 8_1:+68500737 | None:intergenic |
| GCATAGGCAAGATTCATGGA+TGG | 0.630920 | 8_1:+68501511 | None:intergenic |
| GGTTAACAGAGGGTGCACTT+AGG | 0.633566 | 8_1:-68502551 | Msa1209870:CDS |
| AGAACTAGGTAACAAGACTT+GGG | 0.640590 | 8_1:-68504902 | Msa1209870:CDS |
| TGTATCCAGGGGTTAACAGA+GGG | 0.641373 | 8_1:-68502561 | Msa1209870:CDS |
| TGCTAACACTAGCAGCTGGT+AGG | 0.641736 | 8_1:+68500587 | None:intergenic |
| TGTTCTTATGTAACAAGATG+TGG | 0.643340 | 8_1:+68505326 | None:intergenic |
| CATCAGGACCACCACCAGCA+TGG | 0.651055 | 8_1:-68504942 | Msa1209870:CDS |
| TATTGTAGCCGAATCCACAA+TGG | 0.662851 | 8_1:+68505379 | None:intergenic |
| ATATTTGTGAAAGAGAGGTG+AGG | 0.666003 | 8_1:+68505474 | None:intergenic |
| GTCATTCTAACTGCATCCGG+AGG | 0.671792 | 8_1:-68502525 | Msa1209870:CDS |
| GGGAGAACAAGGCGTCATTG+AGG | 0.682410 | 8_1:-68504167 | Msa1209870:intron |
| CAATTGTATACAATGTAGCA+TGG | 0.683310 | 8_1:-68500534 | Msa1209870:three_prime_UTR |
| AAGAATTGGTGGTTGTGGCG+TGG | 0.685663 | 8_1:-68500617 | Msa1209870:three_prime_UTR |
| GTGTATCCAGGGGTTAACAG+AGG | 0.688037 | 8_1:-68502562 | Msa1209870:CDS |
| CTGTCATGGTTCCTCCAGCG+CGG | 0.688289 | 8_1:+68501482 | None:intergenic |
| TGAAGCGGTTAGACTTGAGG+GGG | 0.695261 | 8_1:+68505169 | None:intergenic |
| TCTTATGTAACAAGATGTGG+TGG | 0.712666 | 8_1:+68505329 | None:intergenic |
| AAAGAGACACTAATTGCCGG+AGG | 0.715097 | 8_1:-68503139 | Msa1209870:CDS |
| TCGGACAGCATCAACAGACA+GGG | 0.716110 | 8_1:+68505410 | None:intergenic |
| TACTTGCAAAGATCAAGACG+AGG | 0.743866 | 8_1:+68501708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTAAAAAGCAATAAA+AGG | + | chr8_1:68503055-68503074 | None:intergenic | 10.0% |
| !! | TTTAATAAAAAAGATATTAG+AGG | + | chr8_1:68503183-68503202 | None:intergenic | 10.0% |
| !! | TGATAGTTAAAATAATAAAA+AGG | - | chr8_1:68504689-68504708 | Msa1209870:intron | 10.0% |
| !! | AAGTTATATATATATATATG+AGG | + | chr8_1:68504731-68504750 | None:intergenic | 10.0% |
| !!! | TTCATAATCATTTGATTTTT+AGG | - | chr8_1:68500789-68500808 | Msa1209870:CDS | 15.0% |
| !!! | TTTGAAGTTAATTAATTGTA+TGG | - | chr8_1:68501444-68501463 | Msa1209870:CDS | 15.0% |
| !! | TTAATTAATTGTATGGTTTA+AGG | - | chr8_1:68501451-68501470 | Msa1209870:CDS | 15.0% |
| !! | TACTAATATATTGCTTATAA+TGG | - | chr8_1:68502237-68502256 | Msa1209870:intron | 15.0% |
| !! | ATTTAATGATTATCAAAAGA+CGG | + | chr8_1:68503950-68503969 | None:intergenic | 15.0% |
| !!! | TTAATTATTTTTTCCTTTCT+AGG | - | chr8_1:68503993-68504012 | Msa1209870:intron | 15.0% |
| !! | GTTAAAATAATAAAAAGGAT+TGG | - | chr8_1:68504694-68504713 | Msa1209870:intron | 15.0% |
| !!! | ATAATCATTTGATTTTTAGG+TGG | - | chr8_1:68500792-68500811 | Msa1209870:CDS | 20.0% |
| !!! | TTTTTTTGTGGTAATTGAAT+AGG | - | chr8_1:68501062-68501081 | Msa1209870:intron | 20.0% |
| !! | CAATTCAAAATTTGATTACA+TGG | + | chr8_1:68501290-68501309 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTTTATTTGACT+CGG | + | chr8_1:68502041-68502060 | None:intergenic | 20.0% |
| !! | TTATTACATGTAAAATTGCA+AGG | - | chr8_1:68502119-68502138 | Msa1209870:CDS | 20.0% |
| !!! | ACCAGTCTTATTTTTATATT+AGG | - | chr8_1:68502149-68502168 | Msa1209870:CDS | 20.0% |
| !!! | CCAGTCTTATTTTTATATTA+GGG | - | chr8_1:68502150-68502169 | Msa1209870:CDS | 20.0% |
| !! | TGTGGCAAAAAAATATTTAA+CGG | - | chr8_1:68502934-68502953 | Msa1209870:intron | 20.0% |
| !! | ATATTTCACATATTATACTC+TGG | - | chr8_1:68503157-68503176 | Msa1209870:CDS | 20.0% |
| !! | TTCTATTAATAAATGAAGCA+GGG | + | chr8_1:68503225-68503244 | None:intergenic | 20.0% |
| !! | TTTCTATTAATAAATGAAGC+AGG | + | chr8_1:68503226-68503245 | None:intergenic | 20.0% |
| !!! | TTATCTTTTCTGAAATGAAA+AGG | - | chr8_1:68503408-68503427 | Msa1209870:intron | 20.0% |
| !! | AACAAATTTACTATATACTC+GGG | + | chr8_1:68503776-68503795 | None:intergenic | 20.0% |
| !! | GAACAAATTTACTATATACT+CGG | + | chr8_1:68503777-68503796 | None:intergenic | 20.0% |
| !! | TTAAAAACTTTGTATTTGCA+TGG | + | chr8_1:68504572-68504591 | None:intergenic | 20.0% |
| !!! | TATTTTAACTATCAGTATGA+AGG | + | chr8_1:68504683-68504702 | None:intergenic | 20.0% |
| !!! | TAATAAAAAGGATTGGTTAT+TGG | - | chr8_1:68504701-68504720 | Msa1209870:intron | 20.0% |
| !!! | ATATTTATTAGCATTTGTTG+TGG | - | chr8_1:68504773-68504792 | Msa1209870:intron | 20.0% |
| !! | TCATTAAATCCACATTTAAT+TGG | - | chr8_1:68504979-68504998 | Msa1209870:CDS | 20.0% |
| !!! | ATTTTTCTCCTTAATTTCTT+TGG | - | chr8_1:68505260-68505279 | Msa1209870:intron | 20.0% |
| !!! | TTTTTATCTTTCAAAATCTG+GGG | + | chr8_1:68505323-68505342 | None:intergenic | 20.0% |
| !!! | CTTTTTATCTTTCAAAATCT+GGG | + | chr8_1:68505324-68505343 | None:intergenic | 20.0% |
| !!! | CAGATTTTGAAAGATAAAAA+GGG | - | chr8_1:68505323-68505342 | Msa1209870:five_prime_UTR | 20.0% |
| !!! | GATAAAAAGGGTTTTATTAA+TGG | - | chr8_1:68505335-68505354 | Msa1209870:five_prime_UTR | 20.0% |
| !! | CTATAAGATCAATAAAATTG+TGG | + | chr8_1:68505376-68505395 | None:intergenic | 20.0% |
| !! | TTACTCTTGATATCATATTT+GGG | - | chr8_1:68505490-68505509 | Msa1209870:five_prime_UTR | 20.0% |
| ! | TTTGTATATTTGTGAAAGAG+AGG | + | chr8_1:68500359-68500378 | None:intergenic | 25.0% |
| ! | AAAAACATCATGGTACATAA+TGG | + | chr8_1:68500716-68500735 | None:intergenic | 25.0% |
| ! | TCACAACAAAAAAAACATCA+TGG | + | chr8_1:68500726-68500745 | None:intergenic | 25.0% |
| !!! | GCTTTGAAAAGAAAAGAAAA+TGG | - | chr8_1:68500819-68500838 | Msa1209870:intron | 25.0% |
| !!! | GGATTTGTGTTTTTTTTTTG+TGG | - | chr8_1:68501050-68501069 | Msa1209870:intron | 25.0% |
| !!! | AGTTTTAAGAAAACAGAAAC+TGG | + | chr8_1:68501332-68501351 | None:intergenic | 25.0% |
| !! | GTTTCTGTTTTCTTAAAACT+CGG | - | chr8_1:68501332-68501351 | Msa1209870:intron | 25.0% |
| !! | TTTCTGTTTTCTTAAAACTC+GGG | - | chr8_1:68501333-68501352 | Msa1209870:intron | 25.0% |
| ! | TAGCTTATGAAAAACGATAT+TGG | + | chr8_1:68501727-68501746 | None:intergenic | 25.0% |
| ! | CCCTAATATAAAAATAAGAC+TGG | + | chr8_1:68502153-68502172 | None:intergenic | 25.0% |
| ! | ATTCTTTACTTCACAATTTG+TGG | + | chr8_1:68502202-68502221 | None:intergenic | 25.0% |
| ! | ACATTGAAGGACTAATTTAA+CGG | - | chr8_1:68502385-68502404 | Msa1209870:intron | 25.0% |
| ! | TTGGCTAATAAAAAAATGAG+AGG | + | chr8_1:68502622-68502641 | None:intergenic | 25.0% |
| !!! | TATTTTTACGTTATGCTTTC+GGG | + | chr8_1:68502732-68502751 | None:intergenic | 25.0% |
| !!! | GTATTTTTACGTTATGCTTT+CGG | + | chr8_1:68502733-68502752 | None:intergenic | 25.0% |
| ! | TGTGGCAAAAAAATATCTAA+CGG | + | chr8_1:68503086-68503105 | None:intergenic | 25.0% |
| ! | ATATGTGAAATATACGAGTT+CGG | + | chr8_1:68503150-68503169 | None:intergenic | 25.0% |
| ! | TCTATTAATAAATGAAGCAG+GGG | + | chr8_1:68503224-68503243 | None:intergenic | 25.0% |
| ! | TCCATCATGATATGAAAAAT+TGG | + | chr8_1:68503495-68503514 | None:intergenic | 25.0% |
| ! | TCTACAACAAAACTAAGAAA+GGG | + | chr8_1:68503548-68503567 | None:intergenic | 25.0% |
| !!! | ATTTGTTCTACTTATTTTGC+AGG | - | chr8_1:68503789-68503808 | Msa1209870:intron | 25.0% |
| !!! | TTTGTTCTACTTATTTTGCA+GGG | - | chr8_1:68503790-68503809 | Msa1209870:intron | 25.0% |
| ! | ATTGAAGCACATTACTTATT+TGG | - | chr8_1:68503823-68503842 | Msa1209870:intron | 25.0% |
| ! | ATTGAATGTATGATTGATTG+TGG | + | chr8_1:68503883-68503902 | None:intergenic | 25.0% |
| !! | CATGATAATGTATAAAGGAT+TGG | + | chr8_1:68504063-68504082 | None:intergenic | 25.0% |
| ! | CAATCCTTTATACATTATCA+TGG | - | chr8_1:68504061-68504080 | Msa1209870:CDS | 25.0% |
| !! | ATTTTCTTCAGTATGAACTA+TGG | + | chr8_1:68504168-68504187 | None:intergenic | 25.0% |
| ! | AATATTCAGCACAATTCTTA+GGG | + | chr8_1:68504465-68504484 | None:intergenic | 25.0% |
| !!! | GGAAGTAAAACTTATTTTGA+AGG | + | chr8_1:68504522-68504541 | None:intergenic | 25.0% |
| ! | TGTAAAGAACTGAAAAGTTA+TGG | + | chr8_1:68504821-68504840 | None:intergenic | 25.0% |
| ! | GCAAAATAACCAATTAAATG+TGG | + | chr8_1:68504991-68505010 | None:intergenic | 25.0% |
| !! | TAGCTATTTGGATATTTTCA+AGG | - | chr8_1:68505023-68505042 | Msa1209870:intron | 25.0% |
| ! | ATAGTGAATAATTTCCTCAA+GGG | + | chr8_1:68505100-68505119 | None:intergenic | 25.0% |
| ! | AAATTATTCACTATGACTTG+TGG | - | chr8_1:68505106-68505125 | Msa1209870:intron | 25.0% |
| !! | AATTATTCACTATGACTTGT+GGG | - | chr8_1:68505107-68505126 | Msa1209870:intron | 25.0% |
| !!! | ATCACTGATTTAAGAAGAAT+TGG | - | chr8_1:68505194-68505213 | Msa1209870:CDS | 25.0% |
| ! | CATTGTATACAATTGTTCAA+TGG | + | chr8_1:68505286-68505305 | None:intergenic | 25.0% |
| !! | CCTTTTTATCTTTCAAAATC+TGG | + | chr8_1:68505325-68505344 | None:intergenic | 25.0% |
| !!! | CCAGATTTTGAAAGATAAAA+AGG | - | chr8_1:68505322-68505341 | Msa1209870:five_prime_UTR | 25.0% |
| ! | CAAATATGATATCAAGAGTA+AGG | + | chr8_1:68505491-68505510 | None:intergenic | 25.0% |
| ! | CTTACTCTTGATATCATATT+TGG | - | chr8_1:68505489-68505508 | Msa1209870:five_prime_UTR | 25.0% |
| ! | TACTCTTGATATCATATTTG+GGG | - | chr8_1:68505491-68505510 | Msa1209870:five_prime_UTR | 25.0% |
| TGTTCTTATGTAACAAGATG+TGG | + | chr8_1:68500502-68500521 | None:intergenic | 30.0% | |
| ACAACAAGAAACACTTTAAG+AGG | + | chr8_1:68500575-68500594 | None:intergenic | 30.0% | |
| ! | TTTCTTGTTGTGAATTGTGA+TGG | - | chr8_1:68500584-68500603 | Msa1209870:three_prime_UTR | 30.0% |
| !! | CACAAATCCATTTTAAAGAG+AGG | + | chr8_1:68501039-68501058 | None:intergenic | 30.0% |
| TAAGAAAACAGAAACTGGAA+GGG | + | chr8_1:68501327-68501346 | None:intergenic | 30.0% | |
| TTAAGAAAACAGAAACTGGA+AGG | + | chr8_1:68501328-68501347 | None:intergenic | 30.0% | |
| !! | TCATTCTAAAGCATTTAGGA+TGG | - | chr8_1:68501357-68501376 | Msa1209870:intron | 30.0% |
| !! | CATTCTAAAGCATTTAGGAT+GGG | - | chr8_1:68501358-68501377 | Msa1209870:intron | 30.0% |
| TTTCTGTACAAGAAACTTCA+AGG | + | chr8_1:68501399-68501418 | None:intergenic | 30.0% | |
| TTTGAATATACTACCAACTG+TGG | - | chr8_1:68501494-68501513 | Msa1209870:CDS | 30.0% | |
| TTGAATATACTACCAACTGT+GGG | - | chr8_1:68501495-68501514 | Msa1209870:CDS | 30.0% | |
| !!! | TTAATCTTTTTTCCCACAGT+TGG | + | chr8_1:68501510-68501529 | None:intergenic | 30.0% |
| GGGAAAAAAGATTAATCTCT+TGG | - | chr8_1:68501515-68501534 | Msa1209870:CDS | 30.0% | |
| TCTTGGTATTTATGTTACAC+AGG | - | chr8_1:68501532-68501551 | Msa1209870:CDS | 30.0% | |
| ACAAAAGAGAGTCGAAAAAA+GGG | + | chr8_1:68501843-68501862 | None:intergenic | 30.0% | |
| TACAAAAGAGAGTCGAAAAA+AGG | + | chr8_1:68501844-68501863 | None:intergenic | 30.0% | |
| AAACATCAATGATAACAACC+AGG | - | chr8_1:68502089-68502108 | Msa1209870:intron | 30.0% | |
| ACATGTAATAAGATAAGACC+TGG | + | chr8_1:68502110-68502129 | None:intergenic | 30.0% | |
| TGAACTTGGTCATTAAATGT+TGG | - | chr8_1:68502271-68502290 | Msa1209870:intron | 30.0% | |
| ! | AACCTTGAATGTGTCTTTTT+CGG | - | chr8_1:68502308-68502327 | Msa1209870:intron | 30.0% |
| TTCACACATTACAAACCTTT+GGG | - | chr8_1:68502340-68502359 | Msa1209870:intron | 30.0% | |
| ATCAGCAAAATAGACATTGA+AGG | - | chr8_1:68502372-68502391 | Msa1209870:intron | 30.0% | |
| TTAACGGCTAAATGAATGTT+TGG | - | chr8_1:68502401-68502420 | Msa1209870:intron | 30.0% | |
| TAACGGCTAAATGAATGTTT+GGG | - | chr8_1:68502402-68502421 | Msa1209870:intron | 30.0% | |
| ! | TTTTTATTAGCCAACAGTTG+CGG | - | chr8_1:68502628-68502647 | Msa1209870:intron | 30.0% |
| AATAAAGAGACACTAATTGC+CGG | - | chr8_1:68502683-68502702 | Msa1209870:intron | 30.0% | |
| CTGAAAAATAGCAGAATGTT+CGG | + | chr8_1:68502768-68502787 | None:intergenic | 30.0% | |
| !! | TGGCTTATATATTTCGAGTT+CGG | - | chr8_1:68502854-68502873 | Msa1209870:intron | 30.0% |
| TATGTGAAATATACGAGTTC+GGG | + | chr8_1:68503149-68503168 | None:intergenic | 30.0% | |
| GTATGTAAAATAAACCTGAG+TGG | - | chr8_1:68503332-68503351 | Msa1209870:intron | 30.0% | |
| AAAAAGAAGCAACTGAACAT+GGG | + | chr8_1:68503375-68503394 | None:intergenic | 30.0% | |
| TAAAAAGAAGCAACTGAACA+TGG | + | chr8_1:68503376-68503395 | None:intergenic | 30.0% | |
| ! | TTCAGTTGCTTCTTTTTATG+TGG | - | chr8_1:68503378-68503397 | Msa1209870:intron | 30.0% |
| ! | TCAGTTGCTTCTTTTTATGT+GGG | - | chr8_1:68503379-68503398 | Msa1209870:intron | 30.0% |
| TGAAATGAAAAGGAACCAAA+AGG | - | chr8_1:68503418-68503437 | Msa1209870:intron | 30.0% | |
| GAAATGAAAAGGAACCAAAA+GGG | - | chr8_1:68503419-68503438 | Msa1209870:intron | 30.0% | |
| ! | GCCAATTTTTCATATCATGA+TGG | - | chr8_1:68503491-68503510 | Msa1209870:intron | 30.0% |
| AACTAAGAAAGGGAAATTCA+AGG | + | chr8_1:68503538-68503557 | None:intergenic | 30.0% | |
| GTCTACAACAAAACTAAGAA+AGG | + | chr8_1:68503549-68503568 | None:intergenic | 30.0% | |
| ACAGTCATGTAGATCATATA+GGG | + | chr8_1:68503571-68503590 | None:intergenic | 30.0% | |
| TACAGTCATGTAGATCATAT+AGG | + | chr8_1:68503572-68503591 | None:intergenic | 30.0% | |
| TGTTTCGCTTCATGATTAAT+AGG | - | chr8_1:68503596-68503615 | Msa1209870:intron | 30.0% | |
| GTTTCGCTTCATGATTAATA+GGG | - | chr8_1:68503597-68503616 | Msa1209870:intron | 30.0% | |
| ACATTCAATGATTGAAACAC+AGG | - | chr8_1:68503894-68503913 | Msa1209870:intron | 30.0% | |
| AACTATGGAAACGAAATTAG+GGG | + | chr8_1:68504153-68504172 | None:intergenic | 30.0% | |
| GAACTATGGAAACGAAATTA+GGG | + | chr8_1:68504154-68504173 | None:intergenic | 30.0% | |
| TGAACTATGGAAACGAAATT+AGG | + | chr8_1:68504155-68504174 | None:intergenic | 30.0% | |
| GCATATTCACATTTCAAACA+TGG | + | chr8_1:68504249-68504268 | None:intergenic | 30.0% | |
| ! | TGTTTGAAATGTGAATATGC+AGG | - | chr8_1:68504249-68504268 | Msa1209870:CDS | 30.0% |
| CAATATTCAGCACAATTCTT+AGG | + | chr8_1:68504466-68504485 | None:intergenic | 30.0% | |
| GGATAATTATCTTGAGGTTA+CGG | + | chr8_1:68504551-68504570 | None:intergenic | 30.0% | |
| TTGCATGGATAATTATCTTG+AGG | + | chr8_1:68504557-68504576 | None:intergenic | 30.0% | |
| ! | TGAAAATGAGTCGGTATTTT+GGG | + | chr8_1:68504597-68504616 | None:intergenic | 30.0% |
| TCACAAATCTGAAAATGAGT+CGG | + | chr8_1:68504606-68504625 | None:intergenic | 30.0% | |
| AATATCCAAATAGCTAATCC+TGG | + | chr8_1:68505019-68505038 | None:intergenic | 30.0% | |
| !! | TTTGGATATTTTCAAGGTTG+TGG | - | chr8_1:68505029-68505048 | Msa1209870:intron | 30.0% |
| CATAGTGAATAATTTCCTCA+AGG | + | chr8_1:68505101-68505120 | None:intergenic | 30.0% | |
| ! | ACTGATTTAAGAAGAATTGG+TGG | - | chr8_1:68505197-68505216 | Msa1209870:CDS | 30.0% |
| TTCAATGGCCAAAGAAATTA+AGG | + | chr8_1:68505271-68505290 | None:intergenic | 30.0% | |
| CAATTGTATACAATGTAGCA+TGG | - | chr8_1:68505291-68505310 | Msa1209870:five_prime_UTR | 30.0% | |
| TATTTGTGAAAGAGAGGTGA+GGG | + | chr8_1:68500353-68500372 | None:intergenic | 35.0% | |
| ATATTTGTGAAAGAGAGGTG+AGG | + | chr8_1:68500354-68500373 | None:intergenic | 35.0% | |
| TCTTATGTAACAAGATGTGG+TGG | + | chr8_1:68500499-68500518 | None:intergenic | 35.0% | |
| ATAAGAACACTGCACTTTCT+TGG | - | chr8_1:68500513-68500532 | Msa1209870:three_prime_UTR | 35.0% | |
| AAGAAAGAACCTGGGAATTT+AGG | + | chr8_1:68500684-68500703 | None:intergenic | 35.0% | |
| !! | AAGTCTTGTTACCTAGTTCT+GGG | + | chr8_1:68500923-68500942 | None:intergenic | 35.0% |
| AGAACTAGGTAACAAGACTT+GGG | - | chr8_1:68500923-68500942 | Msa1209870:intron | 35.0% | |
| ! | CAACAATAGAGATGGGTTTA+GGG | + | chr8_1:68500953-68500972 | None:intergenic | 35.0% |
| AATTGAATAGGTGACAGGAA+AGG | - | chr8_1:68501074-68501093 | Msa1209870:intron | 35.0% | |
| GACAGAAAATCAAACATTGC+AGG | + | chr8_1:68501116-68501135 | None:intergenic | 35.0% | |
| ! | ATGTATCATTTTCCCCTGTA+TGG | - | chr8_1:68501151-68501170 | Msa1209870:intron | 35.0% |
| AGTGTCTACAAAACCATACA+GGG | + | chr8_1:68501167-68501186 | None:intergenic | 35.0% | |
| TAGTGTCTACAAAACCATAC+AGG | + | chr8_1:68501168-68501187 | None:intergenic | 35.0% | |
| CATTACTCTTCTGATAGATC+AGG | - | chr8_1:68501247-68501266 | Msa1209870:intron | 35.0% | |
| AAGAAAACAGAAACTGGAAG+GGG | + | chr8_1:68501326-68501345 | None:intergenic | 35.0% | |
| !! | GGGTTCATTCTAAAGCATTT+AGG | - | chr8_1:68501353-68501372 | Msa1209870:intron | 35.0% |
| TTTCTAACAGCAACAAGTTG+TGG | + | chr8_1:68501572-68501591 | None:intergenic | 35.0% | |
| GCTATTGTTTGTGTATTCTC+AGG | - | chr8_1:68501743-68501762 | Msa1209870:CDS | 35.0% | |
| !! | TAGGGCATTGATAGTTTGAA+AGG | - | chr8_1:68502168-68502187 | Msa1209870:CDS | 35.0% |
| TGACCAAGTTCATGCAATAT+GGG | + | chr8_1:68502263-68502282 | None:intergenic | 35.0% | |
| ATGACCAAGTTCATGCAATA+TGG | + | chr8_1:68502264-68502283 | None:intergenic | 35.0% | |
| AACCGAAAAAGACACATTCA+AGG | + | chr8_1:68502313-68502332 | None:intergenic | 35.0% | |
| GTTCACACATTACAAACCTT+TGG | - | chr8_1:68502339-68502358 | Msa1209870:intron | 35.0% | |
| AACGGCTAAATGAATGTTTG+GGG | - | chr8_1:68502403-68502422 | Msa1209870:intron | 35.0% | |
| CAGTCATAATAGTACACGAA+TGG | + | chr8_1:68502461-68502480 | None:intergenic | 35.0% | |
| GTGTACTATTATGACTGATG+TGG | - | chr8_1:68502464-68502483 | Msa1209870:intron | 35.0% | |
| ! | TATGTCTTTTCCAGCTTCTA+TGG | + | chr8_1:68502654-68502673 | None:intergenic | 35.0% |
| GGCAATTAGTGTCTCTTTAT+TGG | + | chr8_1:68502684-68502703 | None:intergenic | 35.0% | |
| !!! | CGAACATTCTGCTATTTTTC+AGG | - | chr8_1:68502766-68502785 | Msa1209870:intron | 35.0% |
| GTAGTGAACTATAGATACTC+TGG | - | chr8_1:68502834-68502853 | Msa1209870:intron | 35.0% | |
| !! | GGCTTATATATTTCGAGTTC+GGG | - | chr8_1:68502855-68502874 | Msa1209870:intron | 35.0% |
| TAAATGGAGCTTAGCCTAAA+TGG | + | chr8_1:68502887-68502906 | None:intergenic | 35.0% | |
| AAGCTCCATTTACTCCATTT+AGG | - | chr8_1:68502895-68502914 | Msa1209870:intron | 35.0% | |
| AGCTCCATTTACTCCATTTA+GGG | - | chr8_1:68502896-68502915 | Msa1209870:intron | 35.0% | |
| CAAACCCTAAATGGAGTAAA+TGG | + | chr8_1:68503117-68503136 | None:intergenic | 35.0% | |
| ! | CATTTACTCCATTTAGGGTT+TGG | - | chr8_1:68502901-68502920 | Msa1209870:intron | 35.0% |
| GTTGTGATATGAGAGAAGAA+TGG | + | chr8_1:68503030-68503049 | None:intergenic | 35.0% | |
| ! | CATTTACTCCATTTAGGGTT+TGG | + | chr8_1:68502901-68502920 | None:intergenic | 35.0% |
| CAAACCCTAAATGGAGTAAA+TGG | - | chr8_1:68503117-68503136 | Msa1209870:CDS | 35.0% | |
| TGCTCCATTTACTCCATTTA+GGG | + | chr8_1:68503124-68503143 | None:intergenic | 35.0% | |
| ATGCTCCATTTACTCCATTT+AGG | + | chr8_1:68503125-68503144 | None:intergenic | 35.0% | |
| GCTTCATGATTAATAGGGAT+TGG | - | chr8_1:68503602-68503621 | Msa1209870:intron | 35.0% | |
| ACATCTTTCAGTTTCTCAAC+AGG | + | chr8_1:68503628-68503647 | None:intergenic | 35.0% | |
| !!! | GTTGGGATGTTTTAATGCAT+CGG | + | chr8_1:68503659-68503678 | None:intergenic | 35.0% |
| ATGCATTAAAACATCCCAAC+TGG | - | chr8_1:68503659-68503678 | Msa1209870:intron | 35.0% | |
| TATGGGGAAAAAGATAACTG+TGG | - | chr8_1:68503684-68503703 | Msa1209870:intron | 35.0% | |
| !! | CTCTGCTACACTTTTTAACA+AGG | - | chr8_1:68503708-68503727 | Msa1209870:intron | 35.0% |
| GACCTTATACTATGTTGTGT+TGG | - | chr8_1:68503921-68503940 | Msa1209870:intron | 35.0% | |
| AGCCAACACAACATAGTATA+AGG | + | chr8_1:68503926-68503945 | None:intergenic | 35.0% | |
| AGAACAGATGAATCCTAGAA+AGG | + | chr8_1:68504009-68504028 | None:intergenic | 35.0% | |
| TTCATCTGTTCTTGCACAAT+TGG | - | chr8_1:68504017-68504036 | Msa1209870:intron | 35.0% | |
| TCATCTGTTCTTGCACAATT+GGG | - | chr8_1:68504018-68504037 | Msa1209870:intron | 35.0% | |
| ! | CAGGCCATGATAATGTATAA+AGG | + | chr8_1:68504068-68504087 | None:intergenic | 35.0% |
| !! | TCTATTGTTCTGAAGTCACT+TGG | - | chr8_1:68504094-68504113 | Msa1209870:intron | 35.0% |
| GAAAATAGACAGATTCACCT+AGG | - | chr8_1:68504182-68504201 | Msa1209870:CDS | 35.0% | |
| GATGGATACTTAATGTTGTC+AGG | + | chr8_1:68504299-68504318 | None:intergenic | 35.0% | |
| AATTATCTTGAGGTTACGGT+GGG | + | chr8_1:68504547-68504566 | None:intergenic | 35.0% | |
| TAATTATCTTGAGGTTACGG+TGG | + | chr8_1:68504548-68504567 | None:intergenic | 35.0% | |
| ! | CTGAAAATGAGTCGGTATTT+TGG | + | chr8_1:68504598-68504617 | None:intergenic | 35.0% |
| CTTTGTGAAAGCAAGATTCT+GGG | + | chr8_1:68504650-68504669 | None:intergenic | 35.0% | |
| AACTTGCATCTGTATTCAGT+AGG | - | chr8_1:68504746-68504765 | Msa1209870:intron | 35.0% | |
| ACTTGCATCTGTATTCAGTA+GGG | - | chr8_1:68504747-68504766 | Msa1209870:intron | 35.0% | |
| GTCTTGAATCCTTAATTGTG+TGG | - | chr8_1:68504795-68504814 | Msa1209870:intron | 35.0% | |
| AAGTTATGGCCACACAATTA+AGG | + | chr8_1:68504807-68504826 | None:intergenic | 35.0% | |
| TGTCAATTTGAAAAAGGAGC+CGG | + | chr8_1:68504924-68504943 | None:intergenic | 35.0% | |
| ! | GAGCACTGTCAATTTGAAAA+AGG | + | chr8_1:68504930-68504949 | None:intergenic | 35.0% |
| !!! | TTGGTTATTTTGCTGTTTCC+AGG | - | chr8_1:68504998-68505017 | Msa1209870:CDS | 35.0% |
| !! | TGTTTCCAGGATTAGCTATT+TGG | - | chr8_1:68505011-68505030 | Msa1209870:CDS | 35.0% |
| TGAATAATTTCCTCAAGGGA+AGG | + | chr8_1:68505096-68505115 | None:intergenic | 35.0% | |
| ! | TTAAGAAGAATTGGTGGTTG+TGG | - | chr8_1:68505203-68505222 | Msa1209870:CDS | 35.0% |
| ATCCACAATGGATGTGGTTT+CGG | + | chr8_1:68500437-68500456 | None:intergenic | 40.0% | |
| AACCACATCCATTGTGGATT+CGG | - | chr8_1:68500438-68500457 | Msa1209870:three_prime_UTR | 40.0% | |
| TATTGTAGCCGAATCCACAA+TGG | + | chr8_1:68500449-68500468 | None:intergenic | 40.0% | |
| ! | ATGTGGTGGTGACAGAAAAT+GGG | + | chr8_1:68500485-68500504 | None:intergenic | 40.0% |
| CTGAAGAGAAGAAAGAACCT+GGG | + | chr8_1:68500692-68500711 | None:intergenic | 40.0% | |
| ACTGAAGAGAAGAAAGAACC+TGG | + | chr8_1:68500693-68500712 | None:intergenic | 40.0% | |
| !! | CAAGTCTTGTTACCTAGTTC+TGG | + | chr8_1:68500924-68500943 | None:intergenic | 40.0% |
| CAGAACTAGGTAACAAGACT+TGG | - | chr8_1:68500922-68500941 | Msa1209870:intron | 40.0% | |
| ! | CCAACAATAGAGATGGGTTT+AGG | + | chr8_1:68500954-68500973 | None:intergenic | 40.0% |
| CCTAAACCCATCTCTATTGT+TGG | - | chr8_1:68500951-68500970 | Msa1209870:intron | 40.0% | |
| GTGCATCCAACAATAGAGAT+GGG | + | chr8_1:68500960-68500979 | None:intergenic | 40.0% | |
| AGTGCATCCAACAATAGAGA+TGG | + | chr8_1:68500961-68500980 | None:intergenic | 40.0% | |
| ATCTCTATTGTTGGATGCAC+TGG | - | chr8_1:68500960-68500979 | Msa1209870:intron | 40.0% | |
| ! | CTGCAGTCCTCTCTTTAAAA+TGG | - | chr8_1:68501029-68501048 | Msa1209870:intron | 40.0% |
| GTGGTAATTGAATAGGTGAC+AGG | - | chr8_1:68501069-68501088 | Msa1209870:intron | 40.0% | |
| GTGTCTACAAAACCATACAG+GGG | + | chr8_1:68501166-68501185 | None:intergenic | 40.0% | |
| GCGACAACTCTAAACTTATC+TGG | + | chr8_1:68501209-68501228 | None:intergenic | 40.0% | |
| GAGTCGAAAAAAGGGAAAAG+AGG | + | chr8_1:68501835-68501854 | None:intergenic | 40.0% | |
| GCTGATTGAATTAGTCCCAA+AGG | + | chr8_1:68502358-68502377 | None:intergenic | 40.0% | |
| GACTGATGTGGTATCTTTCA+AGG | - | chr8_1:68502476-68502495 | Msa1209870:intron | 40.0% | |
| AGCTGGAAAAGACATAGCTT+TGG | - | chr8_1:68502658-68502677 | Msa1209870:intron | 40.0% | |
| TCTTGCATCCAAACCCTAAA+TGG | + | chr8_1:68503108-68503127 | None:intergenic | 40.0% | |
| TCTTGCATCCAAACCCTAAA+TGG | - | chr8_1:68503108-68503127 | Msa1209870:CDS | 40.0% | |
| !! | TACATACCTAAAAGCACCTC+CGG | + | chr8_1:68503319-68503338 | None:intergenic | 40.0% |
| AGGAACCAAAAGGGAATGTA+TGG | - | chr8_1:68503428-68503447 | Msa1209870:intron | 40.0% | |
| ! | CAAGGTTTTCCACGATCAAT+GGG | + | chr8_1:68503520-68503539 | None:intergenic | 40.0% |
| ! | TCAAGGTTTTCCACGATCAA+TGG | + | chr8_1:68503521-68503540 | None:intergenic | 40.0% |
| AAAACATCCCAACTGGAGTA+TGG | - | chr8_1:68503666-68503685 | Msa1209870:intron | 40.0% | |
| AAACATCCCAACTGGAGTAT+GGG | - | chr8_1:68503667-68503686 | Msa1209870:intron | 40.0% | |
| ! | TTTTTCCCCATACTCCAGTT+GGG | + | chr8_1:68503676-68503695 | None:intergenic | 40.0% |
| CATCTGTTCTTGCACAATTG+GGG | - | chr8_1:68504019-68504038 | Msa1209870:intron | 40.0% | |
| TCAGAACAATAGACTCTGTC+AGG | + | chr8_1:68504087-68504106 | None:intergenic | 40.0% | |
| TACTTGCAAAGATCAAGACG+AGG | + | chr8_1:68504120-68504139 | None:intergenic | 40.0% | |
| CGTCTTGATCTTTGCAAGTA+CGG | - | chr8_1:68504120-68504139 | Msa1209870:intron | 40.0% | |
| ACTGCAAAAACTCTATGCCT+AGG | + | chr8_1:68504202-68504221 | None:intergenic | 40.0% | |
| GAAATGTGAATATGCAGGCT+TGG | - | chr8_1:68504254-68504273 | Msa1209870:CDS | 40.0% | |
| ! | AAGATTCTGGGAGAGTCAAA+TGG | + | chr8_1:68504638-68504657 | None:intergenic | 40.0% |
| GCTTTGTGAAAGCAAGATTC+TGG | + | chr8_1:68504651-68504670 | None:intergenic | 40.0% | |
| ! | CCTAATGGTCATGTTTTGCT+TGG | + | chr8_1:68504857-68504876 | None:intergenic | 40.0% |
| CCAAGCAAAACATGACCATT+AGG | - | chr8_1:68504854-68504873 | Msa1209870:CDS | 40.0% | |
| GAACATGACACAGTTCCTAA+TGG | + | chr8_1:68504872-68504891 | None:intergenic | 40.0% | |
| GTCAATTTGAAAAAGGAGCC+GGG | + | chr8_1:68504923-68504942 | None:intergenic | 40.0% | |
| ! | CTCCATGCTTCATAGGTTTT+AGG | - | chr8_1:68504947-68504966 | Msa1209870:CDS | 40.0% |
| AGCCTAAAACCTATGAAGCA+TGG | + | chr8_1:68504952-68504971 | None:intergenic | 40.0% | |
| CAAACTAGCAGCATATTCTC+GGG | + | chr8_1:68505133-68505152 | None:intergenic | 40.0% | |
| GCAAACTAGCAGCATATTCT+CGG | + | chr8_1:68505134-68505153 | None:intergenic | 40.0% | |
| AAAATGCTAACACTAGCAGC+TGG | + | chr8_1:68505245-68505264 | None:intergenic | 40.0% | |
| TATGCCTAGGCTCATATTGT+CGG | + | chr8_1:68505442-68505461 | None:intergenic | 40.0% | |
| AGGTGAGGGAAATGGAAAGT+GGG | + | chr8_1:68500339-68500358 | None:intergenic | 45.0% | |
| TGAAAGAGAGGTGAGGGAAA+TGG | + | chr8_1:68500347-68500366 | None:intergenic | 45.0% | |
| ! | GATGTGGTGGTGACAGAAAA+TGG | + | chr8_1:68500486-68500505 | None:intergenic | 45.0% |
| TCTCCAGCTGAACTTAAGTC+CGG | - | chr8_1:68500621-68500640 | Msa1209870:three_prime_UTR | 45.0% | |
| AAACCGGACTTAAGTTCAGC+TGG | + | chr8_1:68500627-68500646 | None:intergenic | 45.0% | |
| AGTGAAGCGGTTAGACTTGA+GGG | + | chr8_1:68500661-68500680 | None:intergenic | 45.0% | |
| CTGGGAATTTAGGAGTGAAG+CGG | + | chr8_1:68500674-68500693 | None:intergenic | 45.0% | |
| TGTTCAGTGCAGTCAACATC+AGG | - | chr8_1:68500867-68500886 | Msa1209870:intron | 45.0% | |
| CTAGGTAACAAGACTTGGGA+AGG | - | chr8_1:68500927-68500946 | Msa1209870:intron | 45.0% | |
| !! | GTTGGATGCACTGGTTCAAT+TGG | - | chr8_1:68500969-68500988 | Msa1209870:intron | 45.0% |
| !! | CACTGGTTCAATTGGAACTC+AGG | - | chr8_1:68500977-68500996 | Msa1209870:intron | 45.0% |
| ACAAAAACCCGAGATCATCC+CGG | - | chr8_1:68501637-68501656 | Msa1209870:intron | 45.0% | |
| ACTGTTGTCACGGGAATAGT+AGG | - | chr8_1:68501789-68501808 | Msa1209870:CDS | 45.0% | |
| TGGCCCATATTGCATGAACT+TGG | - | chr8_1:68502257-68502276 | Msa1209870:intron | 45.0% | |
| AAAGAGACACTAATTGCCGG+AGG | - | chr8_1:68502686-68502705 | Msa1209870:intron | 45.0% | |
| AGTTCGGGTATGCTCCATTT+AGG | - | chr8_1:68502870-68502889 | Msa1209870:intron | 45.0% | |
| TTCTTCGCTTCAGTGTATCC+AGG | - | chr8_1:68503251-68503270 | Msa1209870:intron | 45.0% | |
| TCTTCGCTTCAGTGTATCCA+GGG | - | chr8_1:68503252-68503271 | Msa1209870:intron | 45.0% | |
| TGTATCCAGGGGTTAACAGA+GGG | - | chr8_1:68503264-68503283 | Msa1209870:intron | 45.0% | |
| CGAGTCATTCTAACTGCATC+CGG | - | chr8_1:68503297-68503316 | Msa1209870:intron | 45.0% | |
| CAGGAAAAGTGATACCACTC+AGG | + | chr8_1:68503349-68503368 | None:intergenic | 45.0% | |
| AGCAACTGAACATGGGAAAC+AGG | + | chr8_1:68503368-68503387 | None:intergenic | 45.0% | |
| ! | GTGTGCCATACATTCCCTTT+TGG | + | chr8_1:68503436-68503455 | None:intergenic | 45.0% |
| TGATGGAAACCCATTGATCG+TGG | - | chr8_1:68503508-68503527 | Msa1209870:intron | 45.0% | |
| AACATCCCAACTGGAGTATG+GGG | - | chr8_1:68503668-68503687 | Msa1209870:intron | 45.0% | |
| ! | CTTTTTCCCCATACTCCAGT+TGG | + | chr8_1:68503677-68503696 | None:intergenic | 45.0% |
| ! | AGGATTGGCAAACGCATATC+AGG | + | chr8_1:68504048-68504067 | None:intergenic | 45.0% |
| GCATAGGCAAGATTCATGGA+TGG | + | chr8_1:68504317-68504336 | None:intergenic | 45.0% | |
| AGCAGCATAGGCAAGATTCA+TGG | + | chr8_1:68504321-68504340 | None:intergenic | 45.0% | |
| ATGAATCTTGCCTATGCTGC+TGG | - | chr8_1:68504320-68504339 | Msa1209870:intron | 45.0% | |
| TGCACTAAGAACACCTGTCA+TGG | + | chr8_1:68504360-68504379 | None:intergenic | 45.0% | |
| TGCATCTGTATTCAGTAGGG+TGG | - | chr8_1:68504750-68504769 | Msa1209870:intron | 45.0% | |
| AATTTCCTCAAGGGAAGGTG+AGG | + | chr8_1:68505091-68505110 | None:intergenic | 45.0% | |
| GATCAGTCTCATGCTAGAAC+AGG | + | chr8_1:68505177-68505196 | None:intergenic | 45.0% | |
| GTAACCGACAATATGAGCCT+AGG | - | chr8_1:68505435-68505454 | Msa1209870:five_prime_UTR | 45.0% | |
| GACAATATGAGCCTAGGCAT+AGG | - | chr8_1:68505441-68505460 | Msa1209870:five_prime_UTR | 45.0% | |
| !! | GTTTTGGCCATTGATGCTCA+AGG | - | chr8_1:68505465-68505484 | Msa1209870:five_prime_UTR | 45.0% |
| AGTAAGGCCTTGAGCATCAA+TGG | + | chr8_1:68505475-68505494 | None:intergenic | 45.0% | |
| GAGGTGAGGGAAATGGAAAG+TGG | + | chr8_1:68500340-68500359 | None:intergenic | 50.0% | |
| TCGGACAGCATCAACAGACA+GGG | + | chr8_1:68500418-68500437 | None:intergenic | 50.0% | |
| TTCGGACAGCATCAACAGAC+AGG | + | chr8_1:68500419-68500438 | None:intergenic | 50.0% | |
| GTCCGAAACCACATCCATTG+TGG | - | chr8_1:68500432-68500451 | Msa1209870:three_prime_UTR | 50.0% | |
| AGCCGAATCCACAATGGATG+TGG | + | chr8_1:68500443-68500462 | None:intergenic | 50.0% | |
| GAGGGGGTCAGTGAAAAAAC+CGG | + | chr8_1:68500643-68500662 | None:intergenic | 50.0% | |
| TGAAGCGGTTAGACTTGAGG+GGG | + | chr8_1:68500659-68500678 | None:intergenic | 50.0% | |
| GTGAAGCGGTTAGACTTGAG+GGG | + | chr8_1:68500660-68500679 | None:intergenic | 50.0% | |
| GAGTGAAGCGGTTAGACTTG+AGG | + | chr8_1:68500662-68500681 | None:intergenic | 50.0% | |
| CGCTTCACTCCTAAATTCCC+AGG | - | chr8_1:68500672-68500691 | Msa1209870:CDS | 50.0% | |
| CAAAAACCCGAGATCATCCC+GGG | - | chr8_1:68501638-68501657 | Msa1209870:intron | 50.0% | |
| TTGTTCTCCCGGGATGATCT+CGG | + | chr8_1:68501648-68501667 | None:intergenic | 50.0% | |
| ! | TCAATGACGCCTTGTTCTCC+CGG | + | chr8_1:68501659-68501678 | None:intergenic | 50.0% |
| ! | AGAACAAGGCGTCATTGAGG+TGG | - | chr8_1:68501661-68501680 | Msa1209870:intron | 50.0% |
| GCGTCATTGAGGTGGACATT+TGG | - | chr8_1:68501669-68501688 | Msa1209870:intron | 50.0% | |
| TGACAACAGTGACTGCATCC+GGG | + | chr8_1:68501779-68501798 | None:intergenic | 50.0% | |
| GTGACAACAGTGACTGCATC+CGG | + | chr8_1:68501780-68501799 | None:intergenic | 50.0% | |
| GGATGCAGTCACTGTTGTCA+CGG | - | chr8_1:68501779-68501798 | Msa1209870:CDS | 50.0% | |
| GATGCAGTCACTGTTGTCAC+GGG | - | chr8_1:68501780-68501799 | Msa1209870:CDS | 50.0% | |
| AGTAGGCTGTGCAGGACTAA+AGG | - | chr8_1:68501806-68501825 | Msa1209870:CDS | 50.0% | |
| TGCGTGTAGATGCATGCACA+CGG | + | chr8_1:68501901-68501920 | None:intergenic | 50.0% | |
| AGGAAGGACAAAAGGACCTC+CGG | + | chr8_1:68502705-68502724 | None:intergenic | 50.0% | |
| TATGCTTTCGGGCAAGAGGA+AGG | + | chr8_1:68502721-68502740 | None:intergenic | 50.0% | |
| ACGTTATGCTTTCGGGCAAG+AGG | + | chr8_1:68502725-68502744 | None:intergenic | 50.0% | |
| GCAGAATGTTCGGAATCAGC+AGG | + | chr8_1:68502758-68502777 | None:intergenic | 50.0% | |
| GGGTTTGGATGCAAGACATG+TGG | - | chr8_1:68502916-68502935 | Msa1209870:intron | 50.0% | |
| GGGTTTGGATGCAAGACATG+TGG | + | chr8_1:68502916-68502935 | None:intergenic | 50.0% | |
| CTTCGCTTCAGTGTATCCAG+GGG | - | chr8_1:68503253-68503272 | Msa1209870:intron | 50.0% | |
| GTGTATCCAGGGGTTAACAG+AGG | - | chr8_1:68503263-68503282 | Msa1209870:intron | 50.0% | |
| ! | GGTTAACAGAGGGTGCACTT+AGG | - | chr8_1:68503274-68503293 | Msa1209870:intron | 50.0% |
| GTCATTCTAACTGCATCCGG+AGG | - | chr8_1:68503300-68503319 | Msa1209870:intron | 50.0% | |
| CTGTTCTTGCACAATTGGGG+TGG | - | chr8_1:68504022-68504041 | Msa1209870:CDS | 50.0% | |
| ATCTTGAGGTTACGGTGGGA+TGG | + | chr8_1:68504543-68504562 | None:intergenic | 50.0% | |
| GACAGTGCTCCATGCTTCAT+AGG | - | chr8_1:68504940-68504959 | Msa1209870:CDS | 50.0% | |
| ! | AAGAATTGGTGGTTGTGGCG+TGG | - | chr8_1:68505208-68505227 | Msa1209870:CDS | 50.0% |
| CACTAGCAGCTGGTAGGAAT+CGG | + | chr8_1:68505235-68505254 | None:intergenic | 50.0% | |
| TGCTAACACTAGCAGCTGGT+AGG | + | chr8_1:68505241-68505260 | None:intergenic | 50.0% | |
| ! | GAGCCTAGGCATAGGAGTTT+TGG | - | chr8_1:68505449-68505468 | Msa1209870:five_prime_UTR | 50.0% |
| TGGCCAAAACTCCTATGCCT+AGG | + | chr8_1:68505455-68505474 | None:intergenic | 50.0% | |
| !! | AGTTCTGGGATTGCTCGTCC+TGG | + | chr8_1:68500909-68500928 | None:intergenic | 55.0% |
| GGACGAGCAATCCCAGAACT+AGG | - | chr8_1:68500909-68500928 | Msa1209870:intron | 55.0% | |
| AGAGTTGTCGCACTTGCAGC+TGG | - | chr8_1:68501218-68501237 | Msa1209870:intron | 55.0% | |
| TGTTCTCCCGGGATGATCTC+GGG | + | chr8_1:68501647-68501666 | None:intergenic | 55.0% | |
| GAGATCATCCCGGGAGAACA+AGG | - | chr8_1:68501647-68501666 | Msa1209870:intron | 55.0% | |
| ! | CAATGACGCCTTGTTCTCCC+GGG | + | chr8_1:68501658-68501677 | None:intergenic | 55.0% |
| ! | GGGAGAACAAGGCGTCATTG+AGG | - | chr8_1:68501658-68501677 | Msa1209870:intron | 55.0% |
| ! | TTCTCAGGTTGCACGTCACC+CGG | - | chr8_1:68501758-68501777 | Msa1209870:CDS | 55.0% |
| ACGGGAATAGTAGGCTGTGC+AGG | - | chr8_1:68501798-68501817 | Msa1209870:CDS | 55.0% | |
| GCTTCTATGGCCGCAACTGT+TGG | + | chr8_1:68502641-68502660 | None:intergenic | 55.0% | |
| ACAGTTGCGGCCATAGAAGC+TGG | - | chr8_1:68502641-68502660 | Msa1209870:intron | 55.0% | |
| CGGGCAAGAGGAAGGACAAA+AGG | + | chr8_1:68502713-68502732 | None:intergenic | 55.0% | |
| !!! | CTGCATCCGGAGGTGCTTTT+AGG | - | chr8_1:68503310-68503329 | Msa1209870:intron | 55.0% |
| TGAAAAAGGAGCCGGGCACA+CGG | + | chr8_1:68504916-68504935 | None:intergenic | 55.0% | |
| GTTGACCTCACCTTCCCTTG+AGG | - | chr8_1:68505083-68505102 | Msa1209870:intron | 55.0% | |
| CATCAGGACCACCACCAGCA+TGG | - | chr8_1:68500883-68500902 | Msa1209870:intron | 60.0% | |
| ATTGCTCGTCCTGGCCATGC+TGG | + | chr8_1:68500900-68500919 | None:intergenic | 60.0% | |
| GTGCACCCTCTGTTAACCCC+TGG | + | chr8_1:68503272-68503291 | None:intergenic | 60.0% | |
| CTGTCATGGTTCCTCCAGCG+CGG | + | chr8_1:68504346-68504365 | None:intergenic | 60.0% | |
| TGACACATGTGCCGTGTGCC+CGG | - | chr8_1:68504902-68504921 | Msa1209870:CDS | 60.0% | |
| CGCGCTGGAGGAACCATGAC+AGG | - | chr8_1:68504344-68504363 | Msa1209870:intron | 65.0% | |
| GGACCACCACCAGCATGGCC+AGG | - | chr8_1:68500888-68500907 | Msa1209870:intron | 70.0% | |
| CGTCCTGGCCATGCTGGTGG+TGG | + | chr8_1:68500894-68500913 | None:intergenic | 70.0% | |
| GCTCGTCCTGGCCATGCTGG+TGG | + | chr8_1:68500897-68500916 | None:intergenic | 70.0% | |
| TCCAGCGCGGCCAGCAGCAT+AGG | + | chr8_1:68504333-68504352 | None:intergenic | 70.0% | |
| TATGCTGCTGGCCGCGCTGG+AGG | - | chr8_1:68504332-68504351 | Msa1209870:intron | 70.0% | |
| GCCTATGCTGCTGGCCGCGC+TGG | - | chr8_1:68504329-68504348 | Msa1209870:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 68500313 | 68505534 | 68500313 | ID=Msa1209870;Name=Msa1209870 |
| chr8_1 | mRNA | 68500313 | 68505534 | 68500313 | ID=Msa1209870-mRNA-1;Parent=Msa1209870;Name=Msa1209870-mRNA-1;_AED=0.12;_eAED=0.12;_QI=267|1|1|1|0.83|0.76|13|346|475 |
| chr8_1 | exon | 68500313 | 68500827 | 68500313 | ID=Msa1209870-mRNA-1:exon:22828;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68501430 | 68501576 | 68501430 | ID=Msa1209870-mRNA-1:exon:22827;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68501711 | 68501832 | 68501711 | ID=Msa1209870-mRNA-1:exon:22826;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68501932 | 68502036 | 68501932 | ID=Msa1209870-mRNA-1:exon:22825;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68502118 | 68502229 | 68502118 | ID=Msa1209870-mRNA-1:exon:22824;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68502516 | 68502583 | 68502516 | ID=Msa1209870-mRNA-1:exon:22823;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68503060 | 68503209 | 68503060 | ID=Msa1209870-mRNA-1:exon:22822;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68504020 | 68504082 | 68504020 | ID=Msa1209870-mRNA-1:exon:22821;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68504168 | 68504293 | 68504168 | ID=Msa1209870-mRNA-1:exon:22820;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68504579 | 68504665 | 68504579 | ID=Msa1209870-mRNA-1:exon:22819;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68504849 | 68505036 | 68504849 | ID=Msa1209870-mRNA-1:exon:22818;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68505154 | 68505249 | 68505154 | ID=Msa1209870-mRNA-1:exon:22817;Parent=Msa1209870-mRNA-1 |
| chr8_1 | exon | 68505273 | 68505534 | 68505273 | ID=Msa1209870-mRNA-1:exon:22816;Parent=Msa1209870-mRNA-1 |
| chr8_1 | five_prime_UTR | 68505273 | 68505534 | 68505273 | ID=Msa1209870-mRNA-1:five_prime_utr;Parent=Msa1209870-mRNA-1 |
| chr8_1 | five_prime_UTR | 68505245 | 68505249 | 68505245 | ID=Msa1209870-mRNA-1:five_prime_utr;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68505154 | 68505244 | 68505154 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68504849 | 68505036 | 68504849 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68504579 | 68504665 | 68504579 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68504168 | 68504293 | 68504168 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68504020 | 68504082 | 68504020 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68503060 | 68503209 | 68503060 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68502516 | 68502583 | 68502516 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68502118 | 68502229 | 68502118 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68501932 | 68502036 | 68501932 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68501711 | 68501832 | 68501711 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68501430 | 68501576 | 68501430 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | CDS | 68500659 | 68500827 | 68500659 | ID=Msa1209870-mRNA-1:cds;Parent=Msa1209870-mRNA-1 |
| chr8_1 | three_prime_UTR | 68500313 | 68500658 | 68500313 | ID=Msa1209870-mRNA-1:three_prime_utr;Parent=Msa1209870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
