AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1211060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211060 MtrunA17_Chr8g0337211 98.922 371 4 0 93 463 29 399 0.0 762
Msa1211060 MtrunA17_Chr8g0337211 95.918 98 2 2 1 97 1 97 2.91e-52 181
Msa1211060 MtrunA17_Chr4g0054901 81.408 355 57 3 97 451 53 398 0.0 590
Msa1211060 MtrunA17_Chr5g0412911 25.574 305 201 12 139 425 83 379 9.02e-17 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211060 AT2G44530.1 92.121 330 24 1 136 463 65 394 0.0 635
Msa1211060 AT2G44530.2 92.121 330 24 1 136 463 64 393 0.0 635
Msa1211060 AT1G32380.1 85.106 329 45 2 125 451 68 394 0.0 588
Msa1211060 AT2G35390.4 81.766 351 55 3 103 451 3 346 0.0 586
Msa1211060 AT2G35390.1 81.766 351 55 3 103 451 3 346 0.0 586
Msa1211060 AT2G35390.2 81.766 351 55 3 103 451 54 397 0.0 586
Msa1211060 AT1G32380.2 90.909 286 26 0 166 451 1 286 0.0 551
Msa1211060 AT2G35390.3 80.808 297 48 3 103 397 54 343 4.45e-171 484
Msa1211060 AT1G10700.1 25.786 318 209 13 106 405 54 362 9.12e-17 82.4
Msa1211060 AT2G42910.1 27.329 322 205 15 142 443 23 335 2.51e-14 74.3

Find 122 sgRNAs with CRISPR-Local

Find 795 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCTTACATGTATTGATTT+TGG 0.117329 8_1:+70431771 Msa1211060:three_prime_UTR
ACTGCAGTCATTCCATATTT+TGG 0.133514 8_1:+70427515 Msa1211060:CDS
AAACACACTGTAGGTATATT+TGG 0.192321 8_1:+70431646 Msa1211060:three_prime_UTR
ATAGGAAATTGCATGTTATA+TGG 0.209711 8_1:+70427307 Msa1211060:intron
CCTCCACTCTGGGCAGTCTA+TGG 0.245181 8_1:+70428500 Msa1211060:CDS
CTACTGATAAGACAGTTAAT+TGG 0.262391 8_1:-70431008 None:intergenic
GCTCTAGCATATCCAAAATA+TGG 0.280293 8_1:-70427527 None:intergenic
ATGTTATATGGGCCTGGATC+TGG 0.313034 8_1:+70427319 Msa1211060:CDS
ATCTGAACAAATAGTCTTGC+TGG 0.323128 8_1:-70428999 None:intergenic
AATTGAACCTTATTCCAGTT+TGG 0.332024 8_1:+70431462 Msa1211060:CDS
TCGATGCCCAAACTGGAATA+AGG 0.340609 8_1:-70431469 None:intergenic
ACCCCAAACAGCTCTCTAAA+AGG 0.342830 8_1:-70431606 None:intergenic
ATTGAACCTTATTCCAGTTT+GGG 0.353000 8_1:+70431463 Msa1211060:CDS
TACTGATAAGACAGTTAATT+GGG 0.362406 8_1:-70431007 None:intergenic
CTTATCAGTAGCAAACCTTC+TGG 0.366216 8_1:+70431020 Msa1211060:CDS
ATGCAAAAGAGCTGCTCCTT+TGG 0.367206 8_1:-70430457 None:intergenic
AATTTGATTGGTGATGTAAA+AGG 0.370527 8_1:+70429294 Msa1211060:CDS
TCAACTGAATATTCAGTTAC+CGG 0.386620 8_1:+70418946 Msa1211060:CDS
TCAACTGAATATTCAGTTAC+CGG 0.386620 8_1:+70423031 Msa1211060:CDS
TCCAACTGCAAGAGAGTGTC+AGG 0.388820 8_1:+70427384 Msa1211060:CDS
CTAAATTCGGAAGGAGGATT+AGG 0.393019 8_1:-70418652 None:intergenic
TGTAGTACAATCTGTCAATC+TGG 0.401957 8_1:+70418903 Msa1211060:CDS
TGTAGTACAATCTGTCAATC+TGG 0.401957 8_1:+70422988 Msa1211060:CDS
CTTGCATGTGACCTCCACTC+TGG 0.408654 8_1:+70428489 Msa1211060:CDS
GCAAGGTAATCGAGTATAAC+AGG 0.410223 8_1:-70428977 None:intergenic
TGTTCAATCGATGCCCAAAC+TGG 0.412006 8_1:-70431476 None:intergenic
AGGGAGAAACGAGGAGTGAT+AGG 0.412888 8_1:-70418767 None:intergenic
TAGGAAATTGCATGTTATAT+GGG 0.416483 8_1:+70427308 Msa1211060:intron
ACCTTCTGGGCGAGACCATA+TGG 0.425438 8_1:+70431034 Msa1211060:CDS
TCCCGCGAATGAGAATCTTA+TGG 0.430669 8_1:+70427442 Msa1211060:CDS
AGATCATGAATACGAGTGTT+TGG 0.434509 8_1:-70419003 None:intergenic
AGATCATGAATACGAGTGTT+TGG 0.434509 8_1:-70423088 None:intergenic
TGTCCATACACATGATCAAC+TGG 0.436657 8_1:-70428537 None:intergenic
GCAAATTTAATTACAGAAGC+TGG 0.437018 8_1:+70428453 Msa1211060:CDS
AACAAATAGTCTTGCTGGCA+AGG 0.449627 8_1:-70428994 None:intergenic
ATTCCAGTTGATCATGTGTA+TGG 0.449841 8_1:+70428534 Msa1211060:CDS
CTAGCTACACCACCAACATC+TGG 0.450859 8_1:-70429040 None:intergenic
TAGGTATATTTGGAATTCAC+AGG 0.455256 8_1:+70431656 Msa1211060:three_prime_UTR
GTAAACGGTTACGCTAAATT+CGG 0.464662 8_1:-70418665 None:intergenic
TTGCATGTGACCTCCACTCT+GGG 0.471838 8_1:+70428490 Msa1211060:CDS
GAAAGAAGATTGAAGTAGAG+TGG 0.474188 8_1:-70418720 None:intergenic
TACCTGAGCGAGTGCGGGAT+TGG 0.477160 8_1:-70419064 None:intergenic
TACCTGAGCGAGTGCGGGAT+TGG 0.477160 8_1:-70423149 None:intergenic
TTGCAGGTGATGAATTTGAT+TGG 0.480553 8_1:+70429282 Msa1211060:intron
CAAAATTATACTCATCAAGC+GGG 0.484934 8_1:-70431698 None:intergenic
CGACGGCGGCGGCGTTGCGG+AGG 0.486887 8_1:-70418787 None:intergenic
TTATCAGTAGCAAACCTTCT+GGG 0.489700 8_1:+70431021 Msa1211060:CDS
CAATCTGTCAATCTGGAAAA+CGG 0.495351 8_1:+70418910 Msa1211060:CDS
CAATCTGTCAATCTGGAAAA+CGG 0.495351 8_1:+70422995 Msa1211060:CDS
CTGAGCGAGTGCGGGATTGG+CGG 0.495771 8_1:-70419061 None:intergenic
CTGAGCGAGTGCGGGATTGG+CGG 0.495771 8_1:-70423146 None:intergenic
ATGGCGTAACACTCAGTAAA+CGG 0.505357 8_1:-70418680 None:intergenic
TTTGGCAGAAGCTCTCCTGC+AGG 0.516016 8_1:-70427486 None:intergenic
AATTGCATGTTATATGGGCC+TGG 0.517043 8_1:+70427313 Msa1211060:CDS
TGTTATATGGGCCTGGATCT+GGG 0.520595 8_1:+70427320 Msa1211060:CDS
ACAAAATTATACTCATCAAG+CGG 0.522286 8_1:-70431699 None:intergenic
CCCTGACACTCTCTTGCAGT+TGG 0.525864 8_1:-70427385 None:intergenic
TCCATAAGATTCTCATTCGC+GGG 0.527102 8_1:-70427443 None:intergenic
CTCCATAAGATTCTCATTCG+CGG 0.529400 8_1:-70427444 None:intergenic
CTTGACAATCTCTCTATAGC+AGG 0.530606 8_1:-70430922 None:intergenic
TCGTAATGATTGATGCCTGC+AGG 0.530985 8_1:+70427471 Msa1211060:CDS
AAAAGGAAAGGTAGCAGTGA+TGG 0.532343 8_1:+70429311 Msa1211060:CDS
CGACGACGGCGGCGGCGTTG+CGG 0.533290 8_1:-70418790 None:intergenic
GTTACTGCAGTATCATAAGC+TGG 0.539533 8_1:-70431525 None:intergenic
GATACTGCAGTAACAAGAAG+TGG 0.540969 8_1:+70431534 Msa1211060:three_prime_UTR
CAACTACTGTTTCAGACTCA+AGG 0.542966 8_1:+70428402 Msa1211060:intron
AGTTGATCATGTGTATGGAC+AGG 0.543298 8_1:+70428539 Msa1211060:CDS
GACGGCGGCGGCGTTGCGGA+GGG 0.548828 8_1:-70418786 None:intergenic
AAGTAGTTCTTCTCTGCTAG+TGG 0.549029 8_1:-70430982 None:intergenic
GATGATACCTGAGCGAGTGC+GGG 0.549570 8_1:-70419069 None:intergenic
GATGATACCTGAGCGAGTGC+GGG 0.549570 8_1:-70423154 None:intergenic
AATTCGGAAGGAGGATTAGG+TGG 0.549616 8_1:-70418649 None:intergenic
ATTGTTGATAAAAGACGTCA+TGG 0.550483 8_1:+70429106 Msa1211060:CDS
ATATGCTAGAGCTGATAGAA+AGG 0.559762 8_1:+70427538 Msa1211060:CDS
CGGAATTGAACTTGTACCAC+CGG 0.561435 8_1:-70418965 None:intergenic
CGGAATTGAACTTGTACCAC+CGG 0.561435 8_1:-70423050 None:intergenic
GGACATGATGAATGAATGAA+TGG 0.561934 8_1:-70418699 None:intergenic
GATTGGTGATGTAAAAGGAA+AGG 0.565352 8_1:+70429299 Msa1211060:CDS
TCATTCGCGGGAGGACATGT+AGG 0.571769 8_1:-70427431 None:intergenic
AAGAGCTGCTCCTTTGGCGA+TGG 0.573536 8_1:-70430451 None:intergenic
GGATGATACCTGAGCGAGTG+CGG 0.580736 8_1:-70419070 None:intergenic
GGATGATACCTGAGCGAGTG+CGG 0.580736 8_1:-70423155 None:intergenic
GCCATATGGTCTCGCCCAGA+AGG 0.586947 8_1:-70431035 None:intergenic
ATAGTTGTCTCGCCAGATGT+TGG 0.591097 8_1:+70429028 Msa1211060:CDS
GTTACTTACGACGACGGCGG+CGG 0.591923 8_1:-70418798 None:intergenic
GACAATCTCTCTATAGCAGG+AGG 0.595468 8_1:-70430919 None:intergenic
GATGACATGATTGATACTGC+TGG 0.599761 8_1:+70429336 Msa1211060:CDS
GTTGTCTCGCCAGATGTTGG+TGG 0.603849 8_1:+70429031 Msa1211060:CDS
GAATATTCAGTTGAACGGTA+CGG 0.605959 8_1:-70418937 None:intergenic
GAATATTCAGTTGAACGGTA+CGG 0.605959 8_1:-70423022 None:intergenic
TAACTGAATATTCAGTTGAA+CGG 0.606307 8_1:-70418942 None:intergenic
TAACTGAATATTCAGTTGAA+CGG 0.606307 8_1:-70423027 None:intergenic
TTCAATTCCGAGTTATCTAG+TGG 0.607893 8_1:+70418978 Msa1211060:CDS
TTCAATTCCGAGTTATCTAG+TGG 0.607893 8_1:+70423063 Msa1211060:CDS
GTTACGCTAAATTCGGAAGG+AGG 0.612911 8_1:-70418658 None:intergenic
TAAGCTGGAACAGCAGAACA+TGG 0.615005 8_1:-70431510 None:intergenic
AACTACTGTTTCAGACTCAA+GGG 0.616461 8_1:+70428403 Msa1211060:intron
CTTATAGGGACCATCGCCAA+AGG 0.620442 8_1:+70430441 Msa1211060:intron
ATTCGGAAGGAGGATTAGGT+GGG 0.629840 8_1:-70418648 None:intergenic
TTTGGCGCCACTAGATAACT+CGG 0.630034 8_1:-70418985 None:intergenic
TTTGGCGCCACTAGATAACT+CGG 0.630034 8_1:-70423070 None:intergenic
CCATAGACTGCCCAGAGTGG+AGG 0.638297 8_1:-70428500 None:intergenic
ACGGTTACGCTAAATTCGGA+AGG 0.642915 8_1:-70418661 None:intergenic
ACTGATAAGACAGTTAATTG+GGG 0.644887 8_1:-70431006 None:intergenic
AGGTATATTTGGAATTCACA+GGG 0.645236 8_1:+70431657 Msa1211060:three_prime_UTR
AGCCCATAGACTGCCCAGAG+TGG 0.655210 8_1:-70428503 None:intergenic
TCATGGGCATAATGTTGCCG+AGG 0.655448 8_1:+70429123 Msa1211060:CDS
TTGGACATATATCTCCCCAT+CGG 0.659494 8_1:-70427366 None:intergenic
ATAAGATTCTCATTCGCGGG+AGG 0.659940 8_1:-70427440 None:intergenic
ACAATCTCTCTATAGCAGGA+GGG 0.668556 8_1:-70430918 None:intergenic
CAACTGCAAGAGAGTGTCAG+GGG 0.669938 8_1:+70427386 Msa1211060:CDS
CCAACTGCAAGAGAGTGTCA+GGG 0.672047 8_1:+70427385 Msa1211060:CDS
ACTGAATATTCAGTTACCGG+TGG 0.679249 8_1:+70418949 Msa1211060:CDS
ACTGAATATTCAGTTACCGG+TGG 0.679249 8_1:+70423034 Msa1211060:CDS
CTGATAAGACAGTTAATTGG+GGG 0.686616 8_1:-70431005 None:intergenic
TTGTTGATAAAAGACGTCAT+GGG 0.699425 8_1:+70429107 Msa1211060:CDS
AAAATTATACTCATCAAGCG+GGG 0.700775 8_1:-70431697 None:intergenic
GCTATAGAGAGATTGTCAAG+CGG 0.702672 8_1:+70430925 Msa1211060:CDS
GAGAGAGTTACTTACGACGA+CGG 0.708624 8_1:-70418804 None:intergenic
AACTGCAAGAGAGTGTCAGG+GGG 0.717564 8_1:+70427387 Msa1211060:CDS
AGAGTTACTTACGACGACGG+CGG 0.740080 8_1:-70418801 None:intergenic
GCGTTGCGGAGGGAGAAACG+AGG 0.760496 8_1:-70418776 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGTTTGTTTTTT+GGG - chr8_1:70420625-70420644 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTGTTTTT+TGG - chr8_1:70420626-70420645 None:intergenic 10.0%
!!! TTTTTTTTTGTTTGTTTTTT+GGG - chr8_1:70420625-70420644 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTGTTTTT+TGG - chr8_1:70420626-70420645 None:intergenic 10.0%
!! ATAAAATTTCAAATATCATT+AGG - chr8_1:70427238-70427257 None:intergenic 10.0%
!!! TTATTTTTTTACAAAATACT+TGG + chr8_1:70428091-70428110 Msa1211060:intron 10.0%
!! TAATAATTTATTTCAATTTG+TGG + chr8_1:70430553-70430572 Msa1211060:intron 10.0%
!! ATTATATTGAGATGTAATAT+AGG + chr8_1:70419142-70419161 Msa1211060:intron 15.0%
!!! CTATTTAAAGATTTTCTAAT+AGG - chr8_1:70419864-70419883 None:intergenic 15.0%
!! TGTGATATTATCATAAATAA+TGG + chr8_1:70421737-70421756 Msa1211060:intron 15.0%
!! TTCTTTATAATTGTTATCAA+TGG - chr8_1:70421903-70421922 None:intergenic 15.0%
!! ACAATTATAAAGAAAATGTA+CGG + chr8_1:70421909-70421928 Msa1211060:intron 15.0%
!! TAAATTGAGATGTAATATAT+TGG - chr8_1:70422750-70422769 None:intergenic 15.0%
!!! AGTTAACTTGATAATTTTTT+AGG + chr8_1:70422817-70422836 Msa1211060:intron 15.0%
!! TAATTAAGTGCTTATATTAT+AGG + chr8_1:70422860-70422879 Msa1211060:intron 15.0%
!! ATTATATTGAGATGTAATAT+AGG + chr8_1:70419142-70419161 Msa1211060:intron 15.0%
!!! CTATTTAAAGATTTTCTAAT+AGG - chr8_1:70419864-70419883 None:intergenic 15.0%
!! TGTGATATTATCATAAATAA+TGG + chr8_1:70421737-70421756 Msa1211060:intron 15.0%
!! TTCTTTATAATTGTTATCAA+TGG - chr8_1:70421903-70421922 None:intergenic 15.0%
!! ACAATTATAAAGAAAATGTA+CGG + chr8_1:70421909-70421928 Msa1211060:intron 15.0%
!! TAAATTGAGATGTAATATAT+TGG - chr8_1:70422750-70422769 None:intergenic 15.0%
!!! AGTTAACTTGATAATTTTTT+AGG + chr8_1:70422817-70422836 Msa1211060:intron 15.0%
!! TAATTAAGTGCTTATATTAT+AGG + chr8_1:70422860-70422879 Msa1211060:intron 15.0%
!!! TTTGTTTTTCTCAAAAAAAA+AGG + chr8_1:70428354-70428373 Msa1211060:intron 15.0%
!! AAGAAAATCAGAAATTTAAA+GGG - chr8_1:70428786-70428805 None:intergenic 15.0%
!! ATATATATCATCAAGAAAAA+GGG - chr8_1:70429625-70429644 None:intergenic 15.0%
!! AATATATATCATCAAGAAAA+AGG - chr8_1:70429626-70429645 None:intergenic 15.0%
!!! GATATATATTATTTTTCTAC+AGG + chr8_1:70429636-70429655 Msa1211060:intron 15.0%
!! AAGACAAATATAATTCAATT+TGG - chr8_1:70429895-70429914 None:intergenic 15.0%
!!! ATTATCTTTAGCTAAAATTT+TGG + chr8_1:70430306-70430325 Msa1211060:intron 15.0%
!!! AAATTGTTAATTTGTCTTAT+AGG + chr8_1:70430426-70430445 Msa1211060:intron 15.0%
!!! AATTGTTAATTTGTCTTATA+GGG + chr8_1:70430427-70430446 Msa1211060:intron 15.0%
!!! TCAAATTATTAAAAGTGTCT+GGG - chr8_1:70419322-70419341 None:intergenic 20.0%
!! TTCATAGTAATTATATGTGT+CGG + chr8_1:70419355-70419374 Msa1211060:intron 20.0%
!! TTTATCCTTATTATCGTATT+CGG - chr8_1:70419464-70419483 None:intergenic 20.0%
!! ACTTATGAACATAAACTTAT+AGG + chr8_1:70419620-70419639 Msa1211060:intron 20.0%
!! AGAATAATAACTGATTAGAA+TGG + chr8_1:70419771-70419790 Msa1211060:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG + chr8_1:70419980-70419999 Msa1211060:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG + chr8_1:70420040-70420059 Msa1211060:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG - chr8_1:70420188-70420207 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG + chr8_1:70420187-70420206 Msa1211060:intron 20.0%
!!! ATCTTTTCATGAAATTGAAA+TGG + chr8_1:70420693-70420712 Msa1211060:intron 20.0%
!!! AAATTGGATTGATAATAATG+AGG - chr8_1:70421135-70421154 None:intergenic 20.0%
!! ATCATCATATATTGAATCTA+TGG - chr8_1:70421519-70421538 None:intergenic 20.0%
!! AAATGGTATATTGAACAATA+TGG + chr8_1:70421769-70421788 Msa1211060:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG + chr8_1:70419980-70419999 Msa1211060:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG + chr8_1:70420040-70420059 Msa1211060:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG - chr8_1:70420188-70420207 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG + chr8_1:70420187-70420206 Msa1211060:intron 20.0%
!!! TCAAATTATTAAAAGTGTCT+GGG - chr8_1:70419322-70419341 None:intergenic 20.0%
!! TTCATAGTAATTATATGTGT+CGG + chr8_1:70419355-70419374 Msa1211060:intron 20.0%
!! TTTATCCTTATTATCGTATT+CGG - chr8_1:70419464-70419483 None:intergenic 20.0%
!! ACTTATGAACATAAACTTAT+AGG + chr8_1:70419620-70419639 Msa1211060:intron 20.0%
!! AGAATAATAACTGATTAGAA+TGG + chr8_1:70419771-70419790 Msa1211060:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG + chr8_1:70419980-70419999 Msa1211060:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG + chr8_1:70420040-70420059 Msa1211060:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG - chr8_1:70420188-70420207 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG + chr8_1:70420187-70420206 Msa1211060:intron 20.0%
!!! ATCTTTTCATGAAATTGAAA+TGG + chr8_1:70420693-70420712 Msa1211060:intron 20.0%
!!! AAATTGGATTGATAATAATG+AGG - chr8_1:70421135-70421154 None:intergenic 20.0%
!! ATCATCATATATTGAATCTA+TGG - chr8_1:70421519-70421538 None:intergenic 20.0%
!! AAATGGTATATTGAACAATA+TGG + chr8_1:70421769-70421788 Msa1211060:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG + chr8_1:70419980-70419999 Msa1211060:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG + chr8_1:70420040-70420059 Msa1211060:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG - chr8_1:70420188-70420207 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG + chr8_1:70420187-70420206 Msa1211060:intron 20.0%
!!! TTATGTATAAGCTATTTCTA+TGG + chr8_1:70426991-70427010 Msa1211060:intron 20.0%
!!! CTATAAGTTGTTTTCATAAA+TGG + chr8_1:70427051-70427070 Msa1211060:intron 20.0%
!!! TTTCTGATTTGCATTTAAAT+AGG + chr8_1:70427289-70427308 Msa1211060:intron 20.0%
!!! ATAACTTGAATGTCATTTTT+AGG + chr8_1:70427704-70427723 Msa1211060:intron 20.0%
!!! ATGTAAATAAACTACCTTTT+TGG + chr8_1:70428157-70428176 Msa1211060:intron 20.0%
!! GGTCATATAAACAATAAAAT+AGG - chr8_1:70428765-70428784 None:intergenic 20.0%
!! GAAGAAAATCAGAAATTTAA+AGG - chr8_1:70428787-70428806 None:intergenic 20.0%
!!! AAAAGTATATTAACATACCT+CGG - chr8_1:70429143-70429162 None:intergenic 20.0%
!! GAGATTCAAAGTATAAATAA+GGG - chr8_1:70429603-70429622 None:intergenic 20.0%
!!! AAAGTTGCAAGATTTTTTTA+AGG - chr8_1:70429668-70429687 None:intergenic 20.0%
!!! TAACTTAATCTTGTCATTTT+AGG + chr8_1:70429732-70429751 Msa1211060:intron 20.0%
!! TATTAATCAGTCTATTCATT+TGG + chr8_1:70430279-70430298 Msa1211060:intron 20.0%
!! CAAATTAACAATTTATTGAG+CGG - chr8_1:70430420-70430439 None:intergenic 20.0%
!! TTCTGTAAAATAAGTTTAGT+TGG + chr8_1:70431091-70431110 Msa1211060:intron 20.0%
!!! CTATTCAAATACATCAATTT+TGG + chr8_1:70431187-70431206 Msa1211060:intron 20.0%
!! CTAGACTGTATTATTAATAA+TGG + chr8_1:70431255-70431274 Msa1211060:intron 20.0%
! TAACTGAATATTCAGTTGAA+CGG - chr8_1:70418945-70418964 None:intergenic 25.0%
!!! CTCAAATTATTAAAAGTGTC+TGG - chr8_1:70419323-70419342 None:intergenic 25.0%
! GTTACAAAAAATGTCTAGTT+TGG + chr8_1:70419540-70419559 Msa1211060:intron 25.0%
!!! AAAGTAGTAAAGAGTGTTAT+AGG + chr8_1:70419796-70419815 Msa1211060:intron 25.0%
! TGTTATAGGAATTAGTTAGT+TGG + chr8_1:70419810-70419829 Msa1211060:intron 25.0%
! ATAGTATTCTCTAATGTGAA+AGG + chr8_1:70419932-70419951 Msa1211060:intron 25.0%
! TAGTATTCTCTAATGTGAAA+GGG + chr8_1:70419933-70419952 Msa1211060:intron 25.0%
! AAATTGAAATGGAAGAAATG+AGG + chr8_1:70420704-70420723 Msa1211060:intron 25.0%
! CATCATCTTCAAATCTTATT+TGG - chr8_1:70420789-70420808 None:intergenic 25.0%
!!! CCATTGTTTTTGAGTAAAAT+TGG - chr8_1:70421151-70421170 None:intergenic 25.0%
!! CCAATTTTACTCAAAAACAA+TGG + chr8_1:70421148-70421167 Msa1211060:intron 25.0%
!! TTGAGAATCGATATGATTTT+TGG - chr8_1:70421208-70421227 None:intergenic 25.0%
! TCTATGAATGTATTATGTTG+GGG - chr8_1:70421267-70421286 None:intergenic 25.0%
! CTCTATGAATGTATTATGTT+GGG - chr8_1:70421268-70421287 None:intergenic 25.0%
! TCTCTATGAATGTATTATGT+TGG - chr8_1:70421269-70421288 None:intergenic 25.0%
! ACATATTCTTCATCATAGAT+TGG - chr8_1:70421458-70421477 None:intergenic 25.0%
! ATCTATGATGAAGAATATGT+TGG + chr8_1:70421458-70421477 Msa1211060:intron 25.0%
! TGAATATGGTGAATCTTTAA+AGG + chr8_1:70421622-70421641 Msa1211060:intron 25.0%
! AAAATTAAAGTTGTCGACAA+AGG + chr8_1:70421796-70421815 Msa1211060:intron 25.0%
! CTATCATTGAATTCATTGAA+TGG - chr8_1:70422073-70422092 None:intergenic 25.0%
! TGAATTCAATGATAGAAAAG+AGG + chr8_1:70422078-70422097 Msa1211060:intron 25.0%
!!! GTTACTATTGATTTTTTCCA+TGG + chr8_1:70422199-70422218 Msa1211060:intron 25.0%
!!! ATTTTTTCCATGGATTACTT+TGG + chr8_1:70422209-70422228 Msa1211060:intron 25.0%
! AAATAGCTCATTTCATCATA+TGG + chr8_1:70422281-70422300 Msa1211060:intron 25.0%
!!! ATAATTTTTTAGGATCTGCT+TGG + chr8_1:70422827-70422846 Msa1211060:intron 25.0%
! TAACTGAATATTCAGTTGAA+CGG - chr8_1:70418945-70418964 None:intergenic 25.0%
!!! CTCAAATTATTAAAAGTGTC+TGG - chr8_1:70419323-70419342 None:intergenic 25.0%
! GTTACAAAAAATGTCTAGTT+TGG + chr8_1:70419540-70419559 Msa1211060:intron 25.0%
! AAGTAGTAAAGAGTTGTTAT+AGG + chr8_1:70423882-70423901 Msa1211060:intron 25.0%
! TGTTATAGGAATTAGTTAGT+TGG + chr8_1:70419810-70419829 Msa1211060:intron 25.0%
! ATAGTATTCTCTAATGTGAA+AGG + chr8_1:70419932-70419951 Msa1211060:intron 25.0%
! TAGTATTCTCTAATGTGAAA+GGG + chr8_1:70419933-70419952 Msa1211060:intron 25.0%
! AAATTGAAATGGAAGAAATG+AGG + chr8_1:70420704-70420723 Msa1211060:intron 25.0%
! CATCATCTTCAAATCTTATT+TGG - chr8_1:70420789-70420808 None:intergenic 25.0%
!!! CCATTGTTTTTGAGTAAAAT+TGG - chr8_1:70421151-70421170 None:intergenic 25.0%
!! CCAATTTTACTCAAAAACAA+TGG + chr8_1:70421148-70421167 Msa1211060:intron 25.0%
!! TTGAGAATCGATATGATTTT+TGG - chr8_1:70421208-70421227 None:intergenic 25.0%
! TCTATGAATGTATTATGTTG+GGG - chr8_1:70421267-70421286 None:intergenic 25.0%
! CTCTATGAATGTATTATGTT+GGG - chr8_1:70421268-70421287 None:intergenic 25.0%
! TCTCTATGAATGTATTATGT+TGG - chr8_1:70421269-70421288 None:intergenic 25.0%
! ACATATTCTTCATCATAGAT+TGG - chr8_1:70421458-70421477 None:intergenic 25.0%
! ATCTATGATGAAGAATATGT+TGG + chr8_1:70421458-70421477 Msa1211060:intron 25.0%
! TGAATATGGTGAATCTTTAA+AGG + chr8_1:70421622-70421641 Msa1211060:intron 25.0%
! AAAATTAAAGTTGTCGACAA+AGG + chr8_1:70421796-70421815 Msa1211060:intron 25.0%
! CTATCATTGAATTCATTGAA+TGG - chr8_1:70422073-70422092 None:intergenic 25.0%
! TGAATTCAATGATAGAAAAG+AGG + chr8_1:70422078-70422097 Msa1211060:intron 25.0%
!!! GTTACTATTGATTTTTTCCA+TGG + chr8_1:70422199-70422218 Msa1211060:intron 25.0%
!!! ATTTTTTCCATGGATTACTT+TGG + chr8_1:70422209-70422228 Msa1211060:intron 25.0%
! AAATAGCTCATTTCATCATA+TGG + chr8_1:70422281-70422300 Msa1211060:intron 25.0%
!!! ATAATTTTTTAGGATCTGCT+TGG + chr8_1:70422827-70422846 Msa1211060:intron 25.0%
! TGAATAGAAATTTCTCTACA+AGG - chr8_1:70427147-70427166 None:intergenic 25.0%
!! AACTTGCTCATGATATAATA+TGG + chr8_1:70427168-70427187 Msa1211060:intron 25.0%
! ATAGGAAATTGCATGTTATA+TGG + chr8_1:70427307-70427326 Msa1211060:intron 25.0%
! TAGGAAATTGCATGTTATAT+GGG + chr8_1:70427308-70427327 Msa1211060:intron 25.0%
!! AATGACTGCAGTAATATTTT+TGG - chr8_1:70427507-70427526 None:intergenic 25.0%
! TTAGGAATGAACATAAGATA+AGG + chr8_1:70427722-70427741 Msa1211060:intron 25.0%
! TAGGAATGAACATAAGATAA+GGG + chr8_1:70427723-70427742 Msa1211060:intron 25.0%
!!! TGCTTATTTTCTTATCAACT+CGG - chr8_1:70428032-70428051 None:intergenic 25.0%
! ATACTGATAATCATTTGGTA+TGG - chr8_1:70428121-70428140 None:intergenic 25.0%
! ATTCATGTACAAGTAATGTT+AGG - chr8_1:70428302-70428321 None:intergenic 25.0%
! AGGTAATAGATTATTGTACA+TGG + chr8_1:70428559-70428578 Msa1211060:intron 25.0%
!! ATCTAAGAAAAGCAAGTTTT+GGG - chr8_1:70428824-70428843 None:intergenic 25.0%
! TAAAAAATGTTTGCCTGAAT+GGG - chr8_1:70428866-70428885 None:intergenic 25.0%
! ATAAAAAATGTTTGCCTGAA+TGG - chr8_1:70428867-70428886 None:intergenic 25.0%
!!! TTCAGGCAAACATTTTTTAT+TGG + chr8_1:70428867-70428886 Msa1211060:intron 25.0%
! TTGAAACTGTCAATGTAATT+CGG + chr8_1:70428912-70428931 Msa1211060:intron 25.0%
!! CTTTTATCAACAATTGCTAA+AGG - chr8_1:70429100-70429119 None:intergenic 25.0%
!! ATATGCTTCATTAGCTTAAA+GGG - chr8_1:70429205-70429224 None:intergenic 25.0%
!! AATATGCTTCATTAGCTTAA+AGG - chr8_1:70429206-70429225 None:intergenic 25.0%
!! AAACTTTAGGCTTTTCTTAT+TGG + chr8_1:70429247-70429266 Msa1211060:intron 25.0%
!!! AATTTGATTGGTGATGTAAA+AGG + chr8_1:70429294-70429313 Msa1211060:CDS 25.0%
! TTGAGTCCTTATTCATAAAA+AGG + chr8_1:70429519-70429538 Msa1211060:intron 25.0%
!! TCATGACCTTTTTATGAATA+AGG - chr8_1:70429528-70429547 None:intergenic 25.0%
! GGAGATTCAAAGTATAAATA+AGG - chr8_1:70429604-70429623 None:intergenic 25.0%
! AAAAATCTTGCAACTTTACA+AGG + chr8_1:70429671-70429690 Msa1211060:intron 25.0%
! AAGAAAATTCAGAAACTCAA+TGG - chr8_1:70429708-70429727 None:intergenic 25.0%
! TTAGAGATGAAAATCATTCT+AGG + chr8_1:70430210-70430229 Msa1211060:intron 25.0%
! TTGTGGTGAAATGAAAATAA+AGG + chr8_1:70430607-70430626 Msa1211060:intron 25.0%
! TGTGGTGAAATGAAAATAAA+GGG + chr8_1:70430608-70430627 Msa1211060:intron 25.0%
! TATCTATATTCATGACATCT+AGG - chr8_1:70430786-70430805 None:intergenic 25.0%
!!! CTTAGTTGTTTTTTGATACA+AGG + chr8_1:70430855-70430874 Msa1211060:intron 25.0%
! TACTGATAAGACAGTTAATT+GGG - chr8_1:70431010-70431029 None:intergenic 25.0%
! TCATTCTACCAATAGAAAAA+AGG + chr8_1:70431122-70431141 Msa1211060:intron 25.0%
! TAATACAGTCTAGCAATAAA+TGG - chr8_1:70431248-70431267 None:intergenic 25.0%
!! TTTTATAGCAAAAACAGAAG+AGG - chr8_1:70431329-70431348 None:intergenic 25.0%
! TAGCAAAAATTATTGCTCAA+CGG - chr8_1:70431360-70431379 None:intergenic 25.0%
!!! TTTGCTAGTTTTGTTTGTAT+AGG + chr8_1:70431373-70431392 Msa1211060:intron 25.0%
! ATTGCAAGATAAATCTACTT+TGG - chr8_1:70431411-70431430 None:intergenic 25.0%
! ACAAAATTATACTCATCAAG+CGG - chr8_1:70431702-70431721 None:intergenic 25.0%
!!! AGTCTTACATGTATTGATTT+TGG + chr8_1:70431771-70431790 Msa1211060:three_prime_UTR 25.0%
ATAGCTGAATGTGAATTTCT+TGG + chr8_1:70418862-70418881 Msa1211060:intron 30.0%
TCAACTGAATATTCAGTTAC+CGG + chr8_1:70418946-70418965 Msa1211060:CDS 30.0%
TCTTTCCGAATACGATAATA+AGG + chr8_1:70419456-70419475 Msa1211060:intron 30.0%
ATAAACTATTAGGCTCAGTT+TGG - chr8_1:70419592-70419611 None:intergenic 30.0%
AAACTGAGCCTAATAGTTTA+TGG + chr8_1:70419591-70419610 Msa1211060:intron 30.0%
GTGAAGAACCATAAACTATT+AGG - chr8_1:70419602-70419621 None:intergenic 30.0%
ATAGGAATTAGTTAGTTGGT+TGG + chr8_1:70419814-70419833 Msa1211060:intron 30.0%
TAGGAATTAGTTAGTTGGTT+GGG + chr8_1:70419815-70419834 Msa1211060:intron 30.0%
AGTATTCTCTAATGTGAAAG+GGG + chr8_1:70419934-70419953 Msa1211060:intron 30.0%
AACCCTTTGATAGAGAATTA+TGG + chr8_1:70419958-70419977 Msa1211060:intron 30.0%
CTCCATAATTCTCTATCAAA+GGG - chr8_1:70419963-70419982 None:intergenic 30.0%
TCTCCATAATTCTCTATCAA+AGG - chr8_1:70419964-70419983 None:intergenic 30.0%
AGTTTAAGCGAAGAAATCAA+CGG + chr8_1:70420375-70420394 Msa1211060:intron 30.0%
TTTCTCAAAACTTCACTTTG+CGG + chr8_1:70420540-70420559 Msa1211060:intron 30.0%
CTTTAATATCATTCACCTGA+AGG - chr8_1:70420864-70420883 None:intergenic 30.0%
! TAGACATTCCAGATTTTGAA+GGG + chr8_1:70420884-70420903 Msa1211060:intron 30.0%
TGAACGTGTATTTGAGTATA+AGG + chr8_1:70420948-70420967 Msa1211060:intron 30.0%
!!! ATCTTTACTTTTTGCTCTTC+CGG - chr8_1:70420979-70420998 None:intergenic 30.0%
TGAAGAAACATGCTTCAATT+TGG + chr8_1:70421013-70421032 Msa1211060:intron 30.0%
AATGAGGAGGTAAATACTTA+CGG - chr8_1:70421119-70421138 None:intergenic 30.0%
! TTGGATTGATAATAATGAGG+AGG - chr8_1:70421132-70421151 None:intergenic 30.0%
!!! GGTTGGTATGAAGATTTTTT+AGG - chr8_1:70421174-70421193 None:intergenic 30.0%
!!! AATCGATATGATTTTTGGTG+GGG - chr8_1:70421203-70421222 None:intergenic 30.0%
!!! GAATCGATATGATTTTTGGT+GGG - chr8_1:70421204-70421223 None:intergenic 30.0%
!! AGAATCGATATGATTTTTGG+TGG - chr8_1:70421205-70421224 None:intergenic 30.0%
CTTGAAACATTTAGGTATCT+TGG - chr8_1:70421298-70421317 None:intergenic 30.0%
! CTAAATGTTTCAAGTGTCAA+GGG + chr8_1:70421304-70421323 Msa1211060:intron 30.0%
CTTTATGATTCACACATCTA+AGG - chr8_1:70421343-70421362 None:intergenic 30.0%
! ATTTGTGAAGTGTTTGAAGA+AGG + chr8_1:70421488-70421507 Msa1211060:intron 30.0%
! TTTGTGAAGTGTTTGAAGAA+GGG + chr8_1:70421489-70421508 Msa1211060:intron 30.0%
AACACTTCATGAATGTCATA+GGG - chr8_1:70421551-70421570 None:intergenic 30.0%
ACGCATTCTTCATCATATAT+TGG - chr8_1:70421596-70421615 None:intergenic 30.0%
AAAGATTCACCATATTCAGA+AGG - chr8_1:70421620-70421639 None:intergenic 30.0%
! AATAATGGAAGCTGTGAAAA+TGG + chr8_1:70421752-70421771 Msa1211060:intron 30.0%
ATCAATGGAAAATGAGACAA+TGG - chr8_1:70421888-70421907 None:intergenic 30.0%
TTGAATTCATTGAATGGTAG+AGG - chr8_1:70422067-70422086 None:intergenic 30.0%
AACTTTGTATTCTCCTTGAA+TGG - chr8_1:70422139-70422158 None:intergenic 30.0%
AAAACTGAAGGATTCCAAAA+TGG + chr8_1:70422237-70422256 Msa1211060:intron 30.0%
ATAGCTGAATGTGAATTTCT+TGG + chr8_1:70418862-70418881 Msa1211060:intron 30.0%
TCAACTGAATATTCAGTTAC+CGG + chr8_1:70418946-70418965 Msa1211060:CDS 30.0%
TCTTTCCGAATACGATAATA+AGG + chr8_1:70419456-70419475 Msa1211060:intron 30.0%
ATAAACTATTAGGCTCAGTT+TGG - chr8_1:70419592-70419611 None:intergenic 30.0%
AAACTGAGCCTAATAGTTTA+TGG + chr8_1:70419591-70419610 Msa1211060:intron 30.0%
GTGAAGAACCATAAACTATT+AGG - chr8_1:70419602-70419621 None:intergenic 30.0%
ATAGGAATTAGTTAGTTGGT+TGG + chr8_1:70419814-70419833 Msa1211060:intron 30.0%
TAGGAATTAGTTAGTTGGTT+GGG + chr8_1:70419815-70419834 Msa1211060:intron 30.0%
AGTATTCTCTAATGTGAAAG+GGG + chr8_1:70419934-70419953 Msa1211060:intron 30.0%
AACCCTTTGATAGAGAATTA+TGG + chr8_1:70419958-70419977 Msa1211060:intron 30.0%
CTCCATAATTCTCTATCAAA+GGG - chr8_1:70419963-70419982 None:intergenic 30.0%
TCTCCATAATTCTCTATCAA+AGG - chr8_1:70419964-70419983 None:intergenic 30.0%
AGTTTAAGCGAAGAAATCAA+CGG + chr8_1:70420375-70420394 Msa1211060:intron 30.0%
TTTCTCAAAACTTCACTTTG+CGG + chr8_1:70420540-70420559 Msa1211060:intron 30.0%
CTTTAATATCATTCACCTGA+AGG - chr8_1:70420864-70420883 None:intergenic 30.0%
! TAGACATTCCAGATTTTGAA+GGG + chr8_1:70420884-70420903 Msa1211060:intron 30.0%
TGAACGTGTATTTGAGTATA+AGG + chr8_1:70420948-70420967 Msa1211060:intron 30.0%
!!! ATCTTTACTTTTTGCTCTTC+CGG - chr8_1:70420979-70420998 None:intergenic 30.0%
TGAAGAAACATGCTTCAATT+TGG + chr8_1:70421013-70421032 Msa1211060:intron 30.0%
AATGAGGAGGTAAATACTTA+CGG - chr8_1:70421119-70421138 None:intergenic 30.0%
! TTGGATTGATAATAATGAGG+AGG - chr8_1:70421132-70421151 None:intergenic 30.0%
!!! GGTTGGTATGAAGATTTTTT+AGG - chr8_1:70421174-70421193 None:intergenic 30.0%
!!! AATCGATATGATTTTTGGTG+GGG - chr8_1:70421203-70421222 None:intergenic 30.0%
!!! GAATCGATATGATTTTTGGT+GGG - chr8_1:70421204-70421223 None:intergenic 30.0%
!! AGAATCGATATGATTTTTGG+TGG - chr8_1:70421205-70421224 None:intergenic 30.0%
CTTGAAACATTTAGGTATCT+TGG - chr8_1:70421298-70421317 None:intergenic 30.0%
! CTAAATGTTTCAAGTGTCAA+GGG + chr8_1:70421304-70421323 Msa1211060:intron 30.0%
CTTTATGATTCACACATCTA+AGG - chr8_1:70421343-70421362 None:intergenic 30.0%
! ATTTGTGAAGTGTTTGAAGA+AGG + chr8_1:70421488-70421507 Msa1211060:intron 30.0%
! TTTGTGAAGTGTTTGAAGAA+GGG + chr8_1:70421489-70421508 Msa1211060:intron 30.0%
AACACTTCATGAATGTCATA+GGG - chr8_1:70421551-70421570 None:intergenic 30.0%
ACGCATTCTTCATCATATAT+TGG - chr8_1:70421596-70421615 None:intergenic 30.0%
AAAGATTCACCATATTCAGA+AGG - chr8_1:70421620-70421639 None:intergenic 30.0%
! AATAATGGAAGCTGTGAAAA+TGG + chr8_1:70421752-70421771 Msa1211060:intron 30.0%
ATCAATGGAAAATGAGACAA+TGG - chr8_1:70421888-70421907 None:intergenic 30.0%
TTGAATTCATTGAATGGTAG+AGG - chr8_1:70422067-70422086 None:intergenic 30.0%
AACTTTGTATTCTCCTTGAA+TGG - chr8_1:70422139-70422158 None:intergenic 30.0%
AAAACTGAAGGATTCCAAAA+TGG + chr8_1:70422237-70422256 Msa1211060:intron 30.0%
TGCTCATGATATAATATGGT+TGG + chr8_1:70427172-70427191 Msa1211060:intron 30.0%
ATACAATCTGTATTCAACAC+AGG - chr8_1:70427641-70427660 None:intergenic 30.0%
!! TCTTTTGTTATCAGACCAAA+TGG + chr8_1:70427927-70427946 Msa1211060:intron 30.0%
!! CTTTTGTTATCAGACCAAAT+GGG + chr8_1:70427928-70427947 Msa1211060:intron 30.0%
ACCAAATGATTATCAGTATC+AGG + chr8_1:70428122-70428141 Msa1211060:intron 30.0%
TGTAAAGATGACAATATCCA+AGG + chr8_1:70428204-70428223 Msa1211060:intron 30.0%
GGTTCAGTTTAGTTAAAACA+TGG + chr8_1:70428375-70428394 Msa1211060:intron 30.0%
GCAAATTTAATTACAGAAGC+TGG + chr8_1:70428453-70428472 Msa1211060:CDS 30.0%
TATTCATAGCATGTTCGTTT+GGG - chr8_1:70428641-70428660 None:intergenic 30.0%
ATATTCATAGCATGTTCGTT+TGG - chr8_1:70428642-70428661 None:intergenic 30.0%
! CATCTAAGAAAAGCAAGTTT+TGG - chr8_1:70428825-70428844 None:intergenic 30.0%
AAAAAATGTTTGCCTGAATG+GGG - chr8_1:70428865-70428884 None:intergenic 30.0%
!!! AGGCAAACATTTTTTATTGG+TGG + chr8_1:70428870-70428889 Msa1211060:intron 30.0%
GAATTACATTGACAGTTTCA+AGG - chr8_1:70428913-70428932 None:intergenic 30.0%
! ATTGTTGATAAAAGACGTCA+TGG + chr8_1:70429106-70429125 Msa1211060:CDS 30.0%
! TTGTTGATAAAAGACGTCAT+GGG + chr8_1:70429107-70429126 Msa1211060:CDS 30.0%
! TACTTTTCTTAAGATCTCTC+AGG + chr8_1:70429156-70429175 Msa1211060:intron 30.0%
GTCTAGATTGAAGAAACTTT+AGG + chr8_1:70429234-70429253 Msa1211060:intron 30.0%
AGTCAGCAAAACATATAAAG+AGG - chr8_1:70429484-70429503 None:intergenic 30.0%
! GCTTTTCTTTTCTATTTCGT+AGG + chr8_1:70429568-70429587 Msa1211060:intron 30.0%
TCAAATGAAAAAGTCGCAAT+AGG + chr8_1:70429852-70429871 Msa1211060:intron 30.0%
! AATAAGAAGGTATGTTGCAA+CGG - chr8_1:70430024-70430043 None:intergenic 30.0%
TCAACGAATGACAAATAAGA+AGG - chr8_1:70430037-70430056 None:intergenic 30.0%
TTATTTGTCATTCGTTGACA+TGG + chr8_1:70430039-70430058 Msa1211060:intron 30.0%
CAATGCATTTATTGATCAAG+TGG + chr8_1:70430065-70430084 Msa1211060:intron 30.0%
GACTGATTAATATAAAGCCA+AGG - chr8_1:70430271-70430290 None:intergenic 30.0%
CAAACAATCAAGAATCTTAG+AGG - chr8_1:70430347-70430366 None:intergenic 30.0%
GTACGTAACAATAGTGAAAA+GGG - chr8_1:70430643-70430662 None:intergenic 30.0%
AGTACGTAACAATAGTGAAA+AGG - chr8_1:70430644-70430663 None:intergenic 30.0%
TGAAGAATGTATTGCAATGA+TGG + chr8_1:70430818-70430837 Msa1211060:intron 30.0%
ACTGATAAGACAGTTAATTG+GGG - chr8_1:70431009-70431028 None:intergenic 30.0%
CTACTGATAAGACAGTTAAT+TGG - chr8_1:70431011-70431030 None:intergenic 30.0%
!!! AGTAGTCTCCTTTTTTCTAT+TGG - chr8_1:70431133-70431152 None:intergenic 30.0%
ATAAAGTTGAGCATGTAACT+TGG + chr8_1:70431210-70431229 Msa1211060:intron 30.0%
AATTGAACCTTATTCCAGTT+TGG + chr8_1:70431462-70431481 Msa1211060:CDS 30.0%
ATTGAACCTTATTCCAGTTT+GGG + chr8_1:70431463-70431482 Msa1211060:CDS 30.0%
AAACACACTGTAGGTATATT+TGG + chr8_1:70431646-70431665 Msa1211060:three_prime_UTR 30.0%
! TAGGTATATTTGGAATTCAC+AGG + chr8_1:70431656-70431675 Msa1211060:three_prime_UTR 30.0%
! AGGTATATTTGGAATTCACA+GGG + chr8_1:70431657-70431676 Msa1211060:three_prime_UTR 30.0%
AAAATTATACTCATCAAGCG+GGG - chr8_1:70431700-70431719 None:intergenic 30.0%
CAAAATTATACTCATCAAGC+GGG - chr8_1:70431701-70431720 None:intergenic 30.0%
!!! TTGATTTGTGTGACTGTTTT+CGG + chr8_1:70431732-70431751 Msa1211060:three_prime_UTR 30.0%
GTAAACGGTTACGCTAAATT+CGG - chr8_1:70418668-70418687 None:intergenic 35.0%
GGACATGATGAATGAATGAA+TGG - chr8_1:70418702-70418721 None:intergenic 35.0%
GAAAGAAGATTGAAGTAGAG+TGG - chr8_1:70418723-70418742 None:intergenic 35.0%
TGTAGTACAATCTGTCAATC+TGG + chr8_1:70418903-70418922 Msa1211060:CDS 35.0%
CAATCTGTCAATCTGGAAAA+CGG + chr8_1:70418910-70418929 Msa1211060:CDS 35.0%
GAATATTCAGTTGAACGGTA+CGG - chr8_1:70418940-70418959 None:intergenic 35.0%
TTCAATTCCGAGTTATCTAG+TGG + chr8_1:70418978-70418997 Msa1211060:CDS 35.0%
AGATCATGAATACGAGTGTT+TGG - chr8_1:70419006-70419025 None:intergenic 35.0%
! AATCGTCTTCGTATTTTCTC+TGG + chr8_1:70419036-70419055 Msa1211060:CDS 35.0%
ACATTCTGTACGATCAAGAT+TGG - chr8_1:70419094-70419113 None:intergenic 35.0%
TAAATATGACCTGACAAGCA+CGG + chr8_1:70419287-70419306 Msa1211060:intron 35.0%
TACCAATCTCACTGTTCATT+AGG + chr8_1:70419744-70419763 Msa1211060:intron 35.0%
ATCCTAATGAACAGTGAGAT+TGG - chr8_1:70419749-70419768 None:intergenic 35.0%
TAAATAGCCCTTCATTTCCT+AGG + chr8_1:70419877-70419896 Msa1211060:intron 35.0%
AGATACTCCTAGGAAATGAA+GGG - chr8_1:70419887-70419906 None:intergenic 35.0%
AAGATACTCCTAGGAAATGA+AGG - chr8_1:70419888-70419907 None:intergenic 35.0%
CAATGTTCAAAGATACTCCT+AGG - chr8_1:70419897-70419916 None:intergenic 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG + chr8_1:70420070-70420089 Msa1211060:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG - chr8_1:70420220-70420239 None:intergenic 35.0%
CTTTGTGAAACATCACTTTG+CGG + chr8_1:70420429-70420448 Msa1211060:intron 35.0%
TGTTTCTTTCGCGAACAAAA+TGG - chr8_1:70420455-70420474 None:intergenic 35.0%
TCTTCGCTCAAACAAAATGA+AGG - chr8_1:70420478-70420497 None:intergenic 35.0%
!!! TGTTTTTTGGGTGAAGATTG+TGG - chr8_1:70420613-70420632 None:intergenic 35.0%
! GATCTTTCGTTTTGTCTTCT+AGG - chr8_1:70420676-70420695 None:intergenic 35.0%
!! TATTTGGTGTGCTTCCAATA+AGG - chr8_1:70420773-70420792 None:intergenic 35.0%
AGATTTGAAGATGATGACTC+CGG + chr8_1:70420793-70420812 Msa1211060:intron 35.0%
TAATATCATTCACCTGAAGG+TGG - chr8_1:70420861-70420880 None:intergenic 35.0%
! GTAGACATTCCAGATTTTGA+AGG + chr8_1:70420883-70420902 Msa1211060:intron 35.0%
TGTAGATTCCCTTCAAAATC+TGG - chr8_1:70420895-70420914 None:intergenic 35.0%
!! TTTTGAAGGGAATCTACAAC+CGG + chr8_1:70420897-70420916 Msa1211060:intron 35.0%
AACCAATCCAGAAAATCATC+CGG - chr8_1:70420919-70420938 None:intergenic 35.0%
ACGTGTATTTGAGTATAAGG+AGG + chr8_1:70420951-70420970 Msa1211060:intron 35.0%
ATTTGAGTATAAGGAGGTTC+CGG + chr8_1:70420957-70420976 Msa1211060:intron 35.0%
AGAAACATGCTTCAATTTGG+TGG + chr8_1:70421016-70421035 Msa1211060:intron 35.0%
GAAACATGCTTCAATTTGGT+GGG + chr8_1:70421017-70421036 Msa1211060:intron 35.0%
TTTGGTGGGAAAATCTCAAA+AGG + chr8_1:70421031-70421050 Msa1211060:intron 35.0%
AAAAGGAGACGTAAGTATGA+AGG + chr8_1:70421048-70421067 Msa1211060:intron 35.0%
AAAGGAGACGTAAGTATGAA+GGG + chr8_1:70421049-70421068 Msa1211060:intron 35.0%
!!! ATCGATATGATTTTTGGTGG+GGG - chr8_1:70421202-70421221 None:intergenic 35.0%
GTTTGAATGAGGAAATAGGT+TGG - chr8_1:70421245-70421264 None:intergenic 35.0%
ATTATGTTGGGGTTTGAATG+AGG - chr8_1:70421256-70421275 None:intergenic 35.0%
CCTTGACACTTGAAACATTT+AGG - chr8_1:70421306-70421325 None:intergenic 35.0%
! CCTAAATGTTTCAAGTGTCA+AGG + chr8_1:70421303-70421322 Msa1211060:intron 35.0%
! TTGTGAAGTGTTTGAAGAAG+GGG + chr8_1:70421490-70421509 Msa1211060:intron 35.0%
CAACACTTCATGAATGTCAT+AGG - chr8_1:70421552-70421571 None:intergenic 35.0%
CTATGACATTCATGAAGTGT+TGG + chr8_1:70421550-70421569 Msa1211060:intron 35.0%
ATTGTAGATTGTACGGATGT+GGG - chr8_1:70421826-70421845 None:intergenic 35.0%
!! TTGAGGCATTGTAGATTGTA+CGG - chr8_1:70421833-70421852 None:intergenic 35.0%
TTACCTCATTATCCTTGTTG+AGG - chr8_1:70421850-70421869 None:intergenic 35.0%
ATACTTGCCACATTCATCTT+GGG + chr8_1:70421951-70421970 Msa1211060:intron 35.0%
TTTGAGTCCAAAGTAATCCA+TGG - chr8_1:70422219-70422238 None:intergenic 35.0%
ACTTTGGACTCAAAAACTGA+AGG + chr8_1:70422225-70422244 Msa1211060:intron 35.0%
! CTTGTCTTTGACTACCATTT+TGG - chr8_1:70422254-70422273 None:intergenic 35.0%
TTTCATCATATGGTAGACGA+AGG + chr8_1:70422291-70422310 Msa1211060:intron 35.0%
!! AAGGAAGAAATATTGACTCG+AGG + chr8_1:70422310-70422329 Msa1211060:intron 35.0%
TAATTCTCTATCATTCTCCC+CGG - chr8_1:70422352-70422371 None:intergenic 35.0%
GGGAGAATGATAGAGAATTA+TGG + chr8_1:70422352-70422371 Msa1211060:intron 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG + chr8_1:70420070-70420089 Msa1211060:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG - chr8_1:70420220-70420239 None:intergenic 35.0%
!!! ATATTGGTTTTCTCCTCCAA+GGG - chr8_1:70422734-70422753 None:intergenic 35.0%
!!! TATATTGGTTTTCTCCTCCA+AGG - chr8_1:70422735-70422754 None:intergenic 35.0%
TGTAGTACAATCTGTCAATC+TGG + chr8_1:70418903-70418922 Msa1211060:CDS 35.0%
CAATCTGTCAATCTGGAAAA+CGG + chr8_1:70418910-70418929 Msa1211060:CDS 35.0%
GAATATTCAGTTGAACGGTA+CGG - chr8_1:70418940-70418959 None:intergenic 35.0%
TTCAATTCCGAGTTATCTAG+TGG + chr8_1:70418978-70418997 Msa1211060:CDS 35.0%
AGATCATGAATACGAGTGTT+TGG - chr8_1:70419006-70419025 None:intergenic 35.0%
! AATCGTCTTCGTATTTTCTC+TGG + chr8_1:70419036-70419055 Msa1211060:CDS 35.0%
ACATTCTGTACGATCAAGAT+TGG - chr8_1:70419094-70419113 None:intergenic 35.0%
TAAATATGACCTGACAAGCA+CGG + chr8_1:70419287-70419306 Msa1211060:intron 35.0%
TACCAATCTCACTGTTCATT+AGG + chr8_1:70419744-70419763 Msa1211060:intron 35.0%
ATCCTAATGAACAGTGAGAT+TGG - chr8_1:70419749-70419768 None:intergenic 35.0%
TAAATAGCCCTTCATTTCCT+AGG + chr8_1:70419877-70419896 Msa1211060:intron 35.0%
AGATACTCCTAGGAAATGAA+GGG - chr8_1:70419887-70419906 None:intergenic 35.0%
AAGATACTCCTAGGAAATGA+AGG - chr8_1:70419888-70419907 None:intergenic 35.0%
CAATGTTCAAAGATACTCCT+AGG - chr8_1:70419897-70419916 None:intergenic 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG + chr8_1:70420070-70420089 Msa1211060:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG - chr8_1:70420220-70420239 None:intergenic 35.0%
CTTTGTGAAACATCACTTTG+CGG + chr8_1:70420429-70420448 Msa1211060:intron 35.0%
TGTTTCTTTCGCGAACAAAA+TGG - chr8_1:70420455-70420474 None:intergenic 35.0%
TCTTCGCTCAAACAAAATGA+AGG - chr8_1:70420478-70420497 None:intergenic 35.0%
!!! TGTTTTTTGGGTGAAGATTG+TGG - chr8_1:70420613-70420632 None:intergenic 35.0%
! GATCTTTCGTTTTGTCTTCT+AGG - chr8_1:70420676-70420695 None:intergenic 35.0%
!! TATTTGGTGTGCTTCCAATA+AGG - chr8_1:70420773-70420792 None:intergenic 35.0%
AGATTTGAAGATGATGACTC+CGG + chr8_1:70420793-70420812 Msa1211060:intron 35.0%
TAATATCATTCACCTGAAGG+TGG - chr8_1:70420861-70420880 None:intergenic 35.0%
! GTAGACATTCCAGATTTTGA+AGG + chr8_1:70420883-70420902 Msa1211060:intron 35.0%
TGTAGATTCCCTTCAAAATC+TGG - chr8_1:70420895-70420914 None:intergenic 35.0%
!! TTTTGAAGGGAATCTACAAC+CGG + chr8_1:70420897-70420916 Msa1211060:intron 35.0%
AACCAATCCAGAAAATCATC+CGG - chr8_1:70420919-70420938 None:intergenic 35.0%
ACGTGTATTTGAGTATAAGG+AGG + chr8_1:70420951-70420970 Msa1211060:intron 35.0%
ATTTGAGTATAAGGAGGTTC+CGG + chr8_1:70420957-70420976 Msa1211060:intron 35.0%
AGAAACATGCTTCAATTTGG+TGG + chr8_1:70421016-70421035 Msa1211060:intron 35.0%
GAAACATGCTTCAATTTGGT+GGG + chr8_1:70421017-70421036 Msa1211060:intron 35.0%
TTTGGTGGGAAAATCTCAAA+AGG + chr8_1:70421031-70421050 Msa1211060:intron 35.0%
AAAAGGAGACGTAAGTATGA+AGG + chr8_1:70421048-70421067 Msa1211060:intron 35.0%
AAAGGAGACGTAAGTATGAA+GGG + chr8_1:70421049-70421068 Msa1211060:intron 35.0%
!!! ATCGATATGATTTTTGGTGG+GGG - chr8_1:70421202-70421221 None:intergenic 35.0%
GTTTGAATGAGGAAATAGGT+TGG - chr8_1:70421245-70421264 None:intergenic 35.0%
ATTATGTTGGGGTTTGAATG+AGG - chr8_1:70421256-70421275 None:intergenic 35.0%
CCTTGACACTTGAAACATTT+AGG - chr8_1:70421306-70421325 None:intergenic 35.0%
! CCTAAATGTTTCAAGTGTCA+AGG + chr8_1:70421303-70421322 Msa1211060:intron 35.0%
! TTGTGAAGTGTTTGAAGAAG+GGG + chr8_1:70421490-70421509 Msa1211060:intron 35.0%
CAACACTTCATGAATGTCAT+AGG - chr8_1:70421552-70421571 None:intergenic 35.0%
CTATGACATTCATGAAGTGT+TGG + chr8_1:70421550-70421569 Msa1211060:intron 35.0%
ATTGTAGATTGTACGGATGT+GGG - chr8_1:70421826-70421845 None:intergenic 35.0%
!! TTGAGGCATTGTAGATTGTA+CGG - chr8_1:70421833-70421852 None:intergenic 35.0%
TTACCTCATTATCCTTGTTG+AGG - chr8_1:70421850-70421869 None:intergenic 35.0%
ATACTTGCCACATTCATCTT+GGG + chr8_1:70421951-70421970 Msa1211060:intron 35.0%
TTTGAGTCCAAAGTAATCCA+TGG - chr8_1:70422219-70422238 None:intergenic 35.0%
ACTTTGGACTCAAAAACTGA+AGG + chr8_1:70422225-70422244 Msa1211060:intron 35.0%
! CTTGTCTTTGACTACCATTT+TGG - chr8_1:70422254-70422273 None:intergenic 35.0%
TTTCATCATATGGTAGACGA+AGG + chr8_1:70422291-70422310 Msa1211060:intron 35.0%
!! AAGGAAGAAATATTGACTCG+AGG + chr8_1:70422310-70422329 Msa1211060:intron 35.0%
TAATTCTCTATCATTCTCCC+CGG - chr8_1:70422352-70422371 None:intergenic 35.0%
GGGAGAATGATAGAGAATTA+TGG + chr8_1:70422352-70422371 Msa1211060:intron 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG + chr8_1:70420070-70420089 Msa1211060:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG - chr8_1:70420220-70420239 None:intergenic 35.0%
!!! ATATTGGTTTTCTCCTCCAA+GGG - chr8_1:70422734-70422753 None:intergenic 35.0%
!!! TATATTGGTTTTCTCCTCCA+AGG - chr8_1:70422735-70422754 None:intergenic 35.0%
! GTTTTTCTGAGCTTAACTAC+TGG - chr8_1:70427117-70427136 None:intergenic 35.0%
GAAATTTCTCTACAAGGACA+TGG - chr8_1:70427141-70427160 None:intergenic 35.0%
! TCTTAATTTTTCCCAGATCC+AGG - chr8_1:70427334-70427353 None:intergenic 35.0%
! AAGATAAAACGTTTTGCCGA+TGG + chr8_1:70427350-70427369 Msa1211060:CDS 35.0%
! AGATAAAACGTTTTGCCGAT+GGG + chr8_1:70427351-70427370 Msa1211060:CDS 35.0%
! ACTGCAGTCATTCCATATTT+TGG + chr8_1:70427515-70427534 Msa1211060:CDS 35.0%
GCTCTAGCATATCCAAAATA+TGG - chr8_1:70427530-70427549 None:intergenic 35.0%
ATATGCTAGAGCTGATAGAA+AGG + chr8_1:70427538-70427557 Msa1211060:CDS 35.0%
TGATAGAAAAGTCTCCCATT+TGG - chr8_1:70427945-70427964 None:intergenic 35.0%
!! TAAGCTTTTGGGAGAGTTTA+TGG - chr8_1:70427969-70427988 None:intergenic 35.0%
GCCTGATACTGATAATCATT+TGG - chr8_1:70428126-70428145 None:intergenic 35.0%
GATACAGAGATATGCCAAAA+AGG - chr8_1:70428174-70428193 None:intergenic 35.0%
CATATCTCTGTATCATACTG+TGG + chr8_1:70428180-70428199 Msa1211060:intron 35.0%
AACTACTGTTTCAGACTCAA+GGG + chr8_1:70428403-70428422 Msa1211060:intron 35.0%
ATTCCAGTTGATCATGTGTA+TGG + chr8_1:70428534-70428553 Msa1211060:CDS 35.0%
CATCACAATTCTGAACAGAA+AGG + chr8_1:70428720-70428739 Msa1211060:intron 35.0%
AATTCTGAACAGAAAGGACA+AGG + chr8_1:70428726-70428745 Msa1211060:intron 35.0%
AAAAATGTTTGCCTGAATGG+GGG - chr8_1:70428864-70428883 None:intergenic 35.0%
TACATTGACAGTTTCAAGGT+AGG - chr8_1:70428909-70428928 None:intergenic 35.0%
! ATCTGAACAAATAGTCTTGC+TGG - chr8_1:70429002-70429021 None:intergenic 35.0%
!!! AGGAGCATCAGATAACTTTT+TGG - chr8_1:70429080-70429099 None:intergenic 35.0%
! TTGGATGAATCTCATTTTGC+AGG + chr8_1:70429266-70429285 Msa1211060:intron 35.0%
TTGCAGGTGATGAATTTGAT+TGG + chr8_1:70429282-70429301 Msa1211060:intron 35.0%
!! GATTGGTGATGTAAAAGGAA+AGG + chr8_1:70429299-70429318 Msa1211060:CDS 35.0%
! TTCAGAAACTCAATGGATTC+AGG - chr8_1:70429701-70429720 None:intergenic 35.0%
ACAATAGTGAGATCCTAATC+AGG + chr8_1:70429767-70429786 Msa1211060:intron 35.0%
! CATTCCTTGACACAGTTTTA+AGG + chr8_1:70429937-70429956 Msa1211060:intron 35.0%
ATCTATTGAGATAGACGCAA+TGG + chr8_1:70429961-70429980 Msa1211060:intron 35.0%
TCTATTGAGATAGACGCAAT+GGG + chr8_1:70429962-70429981 Msa1211060:intron 35.0%
ACCTGACAGATTAAACATGA+TGG + chr8_1:70430239-70430258 Msa1211060:intron 35.0%
ACCATCATGTTTAATCTGTC+AGG - chr8_1:70430243-70430262 None:intergenic 35.0%
! ATCTTAGAGGTATATCGAAG+CGG - chr8_1:70430334-70430353 None:intergenic 35.0%
CACTTGAATCGTGTTAATTG+TGG + chr8_1:70430590-70430609 Msa1211060:intron 35.0%
TAGATTGATCTCAAGAGTTG+TGG + chr8_1:70430675-70430694 Msa1211060:intron 35.0%
AGAGTGTGTTAAGTATGTCT+GGG + chr8_1:70430700-70430719 Msa1211060:intron 35.0%
CTGATAAGACAGTTAATTGG+GGG - chr8_1:70431008-70431027 None:intergenic 35.0%
TTATCAGTAGCAAACCTTCT+GGG + chr8_1:70431021-70431040 Msa1211060:CDS 35.0%
TGTATGTAAGCATGCAAGTA+TGG - chr8_1:70431158-70431177 None:intergenic 35.0%
! TGCTCTGTTTTATCTTTGTC+AGG + chr8_1:70431435-70431454 Msa1211060:intron 35.0%
! GCTCTGTTTTATCTTTGTCA+GGG + chr8_1:70431436-70431455 Msa1211060:intron 35.0%
!! ATACCTTTTAGAGAGCTGTT+TGG + chr8_1:70431603-70431622 Msa1211060:three_prime_UTR 35.0%
!! TACCTTTTAGAGAGCTGTTT+GGG + chr8_1:70431604-70431623 Msa1211060:three_prime_UTR 35.0%
GTACTTGAAAAACACACTGT+AGG + chr8_1:70431637-70431656 Msa1211060:three_prime_UTR 35.0%
CTAAATTCGGAAGGAGGATT+AGG - chr8_1:70418655-70418674 None:intergenic 40.0%
ATGGCGTAACACTCAGTAAA+CGG - chr8_1:70418683-70418702 None:intergenic 40.0%
ACTGAATATTCAGTTACCGG+TGG + chr8_1:70418949-70418968 Msa1211060:CDS 40.0%
AGCTGAGTCAGATTATAGTG+CGG + chr8_1:70419195-70419214 Msa1211060:intron 40.0%
AAATATGACCTGACAAGCAC+GGG + chr8_1:70419288-70419307 Msa1211060:intron 40.0%
TGTCAACTAGCTATGAAGCA+TGG - chr8_1:70419409-70419428 None:intergenic 40.0%
GGTCATACGAGCTTATAAGT+TGG + chr8_1:70419561-70419580 Msa1211060:intron 40.0%
! AAATCTGGTTCAGGGACAAA+AGG - chr8_1:70420322-70420341 None:intergenic 40.0%
! TTTTGTCCCTGAACCAGATT+TGG + chr8_1:70420321-70420340 Msa1211060:intron 40.0%
!!! AGTGAGTTTTCAAGTGAGCA+AGG + chr8_1:70420400-70420419 Msa1211060:intron 40.0%
CGCAAAGTGATGTTTCACAA+AGG - chr8_1:70420431-70420450 None:intergenic 40.0%
!!! TGAGTTTTCAAGTGAGAGCA+AGG + chr8_1:70420511-70420530 Msa1211060:intron 40.0%
!!! TTTTTGGGTGAAGATTGTGG+CGG - chr8_1:70420610-70420629 None:intergenic 40.0%
!! TCTAGGTGGCATTTTGACAA+TGG - chr8_1:70420659-70420678 None:intergenic 40.0%
! CTTTCGTTTTGTCTTCTAGG+TGG - chr8_1:70420673-70420692 None:intergenic 40.0%
GCGACAAATTCAACTACTAC+AGG + chr8_1:70420726-70420745 Msa1211060:intron 40.0%
AGATGATGAAGAGTCACTAC+CGG - chr8_1:70420815-70420834 None:intergenic 40.0%
! TCTACAACCGGATGATTTTC+TGG + chr8_1:70420909-70420928 Msa1211060:intron 40.0%
! AACCGGATGATTTTCTGGAT+TGG + chr8_1:70420914-70420933 Msa1211060:intron 40.0%
TGAAGCATGTTTCTTCAGCT+TGG - chr8_1:70421010-70421029 None:intergenic 40.0%
!! GAATGAGGAAATAGGTTGGT+GGG - chr8_1:70421241-70421260 None:intergenic 40.0%
! TGAATGAGGAAATAGGTTGG+TGG - chr8_1:70421242-70421261 None:intergenic 40.0%
TGGGGTTTGAATGAGGAAAT+AGG - chr8_1:70421249-70421268 None:intergenic 40.0%
! TGTTTCAAGTGTCAAGGGTA+TGG + chr8_1:70421309-70421328 Msa1211060:intron 40.0%
AGTATTCACCATCGTCAATG+AGG + chr8_1:70421361-70421380 Msa1211060:intron 40.0%
GTTTATCTCCTCATTGACGA+TGG - chr8_1:70421372-70421391 None:intergenic 40.0%
ATCATTTGAAGATGAGACGC+TGG + chr8_1:70421427-70421446 Msa1211060:intron 40.0%
TCATTTGAAGATGAGACGCT+GGG + chr8_1:70421428-70421447 Msa1211060:intron 40.0%
! TGTGAAGTGTTTGAAGAAGG+GGG + chr8_1:70421491-70421510 Msa1211060:intron 40.0%
!! TCATGAAGTGTTGGAACAAG+AGG + chr8_1:70421559-70421578 Msa1211060:intron 40.0%
GAATGCGTTCCTTCTGAATA+TGG + chr8_1:70421608-70421627 Msa1211060:intron 40.0%
ATCACAAAACTTACCTTGCG+AGG - chr8_1:70421723-70421742 None:intergenic 40.0%
CATTGTAGATTGTACGGATG+TGG - chr8_1:70421827-70421846 None:intergenic 40.0%
CAATCTACAATGCCTCAACA+AGG + chr8_1:70421835-70421854 Msa1211060:intron 40.0%
ATGCCTCAACAAGGATAATG+AGG + chr8_1:70421844-70421863 Msa1211060:intron 40.0%
ACGGTGTGATGTTATTCCAA+TGG + chr8_1:70421928-70421947 Msa1211060:intron 40.0%
TGAATGTGGCAAGTATCCAT+TGG - chr8_1:70421947-70421966 None:intergenic 40.0%
GATACTTGCCACATTCATCT+TGG + chr8_1:70421950-70421969 Msa1211060:intron 40.0%
! CTTCACAAAAGTGTGGATGT+TGG - chr8_1:70422020-70422039 None:intergenic 40.0%
! CAACATCCACACTTTTGTGA+AGG + chr8_1:70422018-70422037 Msa1211060:intron 40.0%
TCACATCCTTCACAAAAGTG+TGG - chr8_1:70422027-70422046 None:intergenic 40.0%
AAAGAGGAGTTCAAGCTACT+TGG + chr8_1:70422094-70422113 Msa1211060:intron 40.0%
TTCTCCTTGAATGGTTCCTT+TGG - chr8_1:70422130-70422149 None:intergenic 40.0%
TCAATAGTAACATCCTCCCA+AGG - chr8_1:70422190-70422209 None:intergenic 40.0%
AATTCTCTATCATTCTCCCC+GGG - chr8_1:70422351-70422370 None:intergenic 40.0%
ACTGAATATTCAGTTACCGG+TGG + chr8_1:70418949-70418968 Msa1211060:CDS 40.0%
AGCTGAGTCAGATTATAGTG+CGG + chr8_1:70419195-70419214 Msa1211060:intron 40.0%
AAATATGACCTGACAAGCAC+GGG + chr8_1:70419288-70419307 Msa1211060:intron 40.0%
TGTCAACTAGCTATGAAGCA+TGG - chr8_1:70419409-70419428 None:intergenic 40.0%
GGTCATACGAGCTTATAAGT+TGG + chr8_1:70419561-70419580 Msa1211060:intron 40.0%
! AAATCTGGTTCAGGGACAAA+AGG - chr8_1:70420322-70420341 None:intergenic 40.0%
! TTTTGTCCCTGAACCAGATT+TGG + chr8_1:70420321-70420340 Msa1211060:intron 40.0%
!!! AGTGAGTTTTCAAGTGAGCA+AGG + chr8_1:70420400-70420419 Msa1211060:intron 40.0%
CGCAAAGTGATGTTTCACAA+AGG - chr8_1:70420431-70420450 None:intergenic 40.0%
!!! TGAGTTTTCAAGTGAGAGCA+AGG + chr8_1:70420511-70420530 Msa1211060:intron 40.0%
!!! TTTTTGGGTGAAGATTGTGG+CGG - chr8_1:70420610-70420629 None:intergenic 40.0%
!! TCTAGGTGGCATTTTGACAA+TGG - chr8_1:70420659-70420678 None:intergenic 40.0%
! CTTTCGTTTTGTCTTCTAGG+TGG - chr8_1:70420673-70420692 None:intergenic 40.0%
GCGACAAATTCAACTACTAC+AGG + chr8_1:70420726-70420745 Msa1211060:intron 40.0%
AGATGATGAAGAGTCACTAC+CGG - chr8_1:70420815-70420834 None:intergenic 40.0%
! TCTACAACCGGATGATTTTC+TGG + chr8_1:70420909-70420928 Msa1211060:intron 40.0%
! AACCGGATGATTTTCTGGAT+TGG + chr8_1:70420914-70420933 Msa1211060:intron 40.0%
TGAAGCATGTTTCTTCAGCT+TGG - chr8_1:70421010-70421029 None:intergenic 40.0%
!! GAATGAGGAAATAGGTTGGT+GGG - chr8_1:70421241-70421260 None:intergenic 40.0%
! TGAATGAGGAAATAGGTTGG+TGG - chr8_1:70421242-70421261 None:intergenic 40.0%
TGGGGTTTGAATGAGGAAAT+AGG - chr8_1:70421249-70421268 None:intergenic 40.0%
! TGTTTCAAGTGTCAAGGGTA+TGG + chr8_1:70421309-70421328 Msa1211060:intron 40.0%
AGTATTCACCATCGTCAATG+AGG + chr8_1:70421361-70421380 Msa1211060:intron 40.0%
GTTTATCTCCTCATTGACGA+TGG - chr8_1:70421372-70421391 None:intergenic 40.0%
ATCATTTGAAGATGAGACGC+TGG + chr8_1:70421427-70421446 Msa1211060:intron 40.0%
TCATTTGAAGATGAGACGCT+GGG + chr8_1:70421428-70421447 Msa1211060:intron 40.0%
! TGTGAAGTGTTTGAAGAAGG+GGG + chr8_1:70421491-70421510 Msa1211060:intron 40.0%
!! TCATGAAGTGTTGGAACAAG+AGG + chr8_1:70421559-70421578 Msa1211060:intron 40.0%
GAATGCGTTCCTTCTGAATA+TGG + chr8_1:70421608-70421627 Msa1211060:intron 40.0%
ATCACAAAACTTACCTTGCG+AGG - chr8_1:70421723-70421742 None:intergenic 40.0%
CATTGTAGATTGTACGGATG+TGG - chr8_1:70421827-70421846 None:intergenic 40.0%
CAATCTACAATGCCTCAACA+AGG + chr8_1:70421835-70421854 Msa1211060:intron 40.0%
ATGCCTCAACAAGGATAATG+AGG + chr8_1:70421844-70421863 Msa1211060:intron 40.0%
ACGGTGTGATGTTATTCCAA+TGG + chr8_1:70421928-70421947 Msa1211060:intron 40.0%
TGAATGTGGCAAGTATCCAT+TGG - chr8_1:70421947-70421966 None:intergenic 40.0%
GATACTTGCCACATTCATCT+TGG + chr8_1:70421950-70421969 Msa1211060:intron 40.0%
! CTTCACAAAAGTGTGGATGT+TGG - chr8_1:70422020-70422039 None:intergenic 40.0%
! CAACATCCACACTTTTGTGA+AGG + chr8_1:70422018-70422037 Msa1211060:intron 40.0%
TCACATCCTTCACAAAAGTG+TGG - chr8_1:70422027-70422046 None:intergenic 40.0%
AAAGAGGAGTTCAAGCTACT+TGG + chr8_1:70422094-70422113 Msa1211060:intron 40.0%
TTCTCCTTGAATGGTTCCTT+TGG - chr8_1:70422130-70422149 None:intergenic 40.0%
TCAATAGTAACATCCTCCCA+AGG - chr8_1:70422190-70422209 None:intergenic 40.0%
AATTCTCTATCATTCTCCCC+GGG - chr8_1:70422351-70422370 None:intergenic 40.0%
AATTGCATGTTATATGGGCC+TGG + chr8_1:70427313-70427332 Msa1211060:CDS 40.0%
! GATAAAACGTTTTGCCGATG+GGG + chr8_1:70427352-70427371 Msa1211060:CDS 40.0%
TTGGACATATATCTCCCCAT+CGG - chr8_1:70427369-70427388 None:intergenic 40.0%
TCCATAAGATTCTCATTCGC+GGG - chr8_1:70427446-70427465 None:intergenic 40.0%
CTCCATAAGATTCTCATTCG+CGG - chr8_1:70427447-70427466 None:intergenic 40.0%
TAGCTAGCGGTTATCAGTAA+TGG - chr8_1:70427885-70427904 None:intergenic 40.0%
AACGCAAATGAAGTAGCTAG+CGG - chr8_1:70427898-70427917 None:intergenic 40.0%
TCCCAAAAGCTTAACCTGTT+GGG + chr8_1:70427976-70427995 Msa1211060:intron 40.0%
! ACCCAACAGGTTAAGCTTTT+GGG - chr8_1:70427980-70427999 None:intergenic 40.0%
! AACCCAACAGGTTAAGCTTT+TGG - chr8_1:70427981-70428000 None:intergenic 40.0%
AAGCTTAACCTGTTGGGTTA+AGG + chr8_1:70427982-70428001 Msa1211060:intron 40.0%
TGGTCTAATCACTAATGCCT+TGG - chr8_1:70428224-70428243 None:intergenic 40.0%
AGATGCATGTAGAACGTGAT+TGG - chr8_1:70428244-70428263 None:intergenic 40.0%
CAACTACTGTTTCAGACTCA+AGG + chr8_1:70428402-70428421 Msa1211060:intron 40.0%
TGTCCATACACATGATCAAC+TGG - chr8_1:70428540-70428559 None:intergenic 40.0%
AGTTGATCATGTGTATGGAC+AGG + chr8_1:70428539-70428558 Msa1211060:CDS 40.0%
AAACATTCTTACCCCCATTC+AGG + chr8_1:70428850-70428869 Msa1211060:intron 40.0%
GCAAGGTAATCGAGTATAAC+AGG - chr8_1:70428980-70428999 None:intergenic 40.0%
! AACAAATAGTCTTGCTGGCA+AGG - chr8_1:70428997-70429016 None:intergenic 40.0%
AAAAGGAAAGGTAGCAGTGA+TGG + chr8_1:70429311-70429330 Msa1211060:CDS 40.0%
GATGACATGATTGATACTGC+TGG + chr8_1:70429336-70429355 Msa1211060:CDS 40.0%
TGTCTCTATGACCCTTAGAT+CGG + chr8_1:70429403-70429422 Msa1211060:intron 40.0%
TGTATTTCCATGTGCAATGC+AGG + chr8_1:70429823-70429842 Msa1211060:intron 40.0%
ATAACATCCTGCATTGCACA+TGG - chr8_1:70429833-70429852 None:intergenic 40.0%
GATGCCTTAAAACTGTGTCA+AGG - chr8_1:70429944-70429963 None:intergenic 40.0%
!! GTGCATTGCACTCTAAAGTT+TGG - chr8_1:70430171-70430190 None:intergenic 40.0%
AAACATGATGGTTGCTTCCT+TGG + chr8_1:70430251-70430270 Msa1211060:intron 40.0%
AATTCTCTCTTGCTACAGCT+TGG + chr8_1:70430371-70430390 Msa1211060:intron 40.0%
! CAGCTCTTTTGCATCAAGAA+GGG + chr8_1:70430466-70430485 Msa1211060:CDS 40.0%
! AGCTCTTTTGCATCAAGAAG+GGG + chr8_1:70430467-70430486 Msa1211060:CDS 40.0%
! AATTTGTGGTTTGTGCTGCT+AGG + chr8_1:70430567-70430586 Msa1211060:intron 40.0%
! GAGAGTGTGTTAAGTATGTC+TGG + chr8_1:70430699-70430718 Msa1211060:intron 40.0%
ACAATCTCTCTATAGCAGGA+GGG - chr8_1:70430921-70430940 None:intergenic 40.0%
CTTGACAATCTCTCTATAGC+AGG - chr8_1:70430925-70430944 None:intergenic 40.0%
GCTATAGAGAGATTGTCAAG+CGG + chr8_1:70430925-70430944 Msa1211060:CDS 40.0%
AAGTAGTTCTTCTCTGCTAG+TGG - chr8_1:70430985-70431004 None:intergenic 40.0%
CTTATCAGTAGCAAACCTTC+TGG + chr8_1:70431020-70431039 Msa1211060:CDS 40.0%
! CTGTTTTATCTTTGTCAGGG+TGG + chr8_1:70431439-70431458 Msa1211060:intron 40.0%
GTTACTGCAGTATCATAAGC+TGG - chr8_1:70431528-70431547 None:intergenic 40.0%
GATACTGCAGTAACAAGAAG+TGG + chr8_1:70431534-70431553 Msa1211060:three_prime_UTR 40.0%
!! ACCTTTTAGAGAGCTGTTTG+GGG + chr8_1:70431605-70431624 Msa1211060:three_prime_UTR 40.0%
ATTCGGAAGGAGGATTAGGT+GGG - chr8_1:70418651-70418670 None:intergenic 45.0%
AATTCGGAAGGAGGATTAGG+TGG - chr8_1:70418652-70418671 None:intergenic 45.0%
GTTACGCTAAATTCGGAAGG+AGG - chr8_1:70418661-70418680 None:intergenic 45.0%
ACGGTTACGCTAAATTCGGA+AGG - chr8_1:70418664-70418683 None:intergenic 45.0%
GAGAGAGTTACTTACGACGA+CGG - chr8_1:70418807-70418826 None:intergenic 45.0%
CGGAATTGAACTTGTACCAC+CGG - chr8_1:70418968-70418987 None:intergenic 45.0%
TTTGGCGCCACTAGATAACT+CGG - chr8_1:70418988-70419007 None:intergenic 45.0%
AGTCAGATTATAGTGCGGTG+CGG + chr8_1:70419200-70419219 Msa1211060:intron 45.0%
CTATTAGGCTCAGTTTGGCA+AGG - chr8_1:70419587-70419606 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG - chr8_1:70420217-70420236 None:intergenic 45.0%
TGGTTCAGGGACAAAAGGAA+AGG - chr8_1:70420317-70420336 None:intergenic 45.0%
! CTGATGCCAAATCTGGTTCA+GGG - chr8_1:70420330-70420349 None:intergenic 45.0%
! TCTGATGCCAAATCTGGTTC+AGG - chr8_1:70420331-70420350 None:intergenic 45.0%
TTCGCTTAAACTCAACTCCG+AGG - chr8_1:70420367-70420386 None:intergenic 45.0%
! GTGTTAGCTTCGCGAACAAA+TGG - chr8_1:70420566-70420585 None:intergenic 45.0%
!! GGTGGCATTTTGACAATGGT+GGG - chr8_1:70420655-70420674 None:intergenic 45.0%
!! AGGTGGCATTTTGACAATGG+TGG - chr8_1:70420656-70420675 None:intergenic 45.0%
! CAACGTCCAACAAGCCTTAT+TGG + chr8_1:70420756-70420775 Msa1211060:intron 45.0%
GTGCTTCCAATAAGGCTTGT+TGG - chr8_1:70420765-70420784 None:intergenic 45.0%
GAAGAGCAAGATCAAGACGT+GGG + chr8_1:70421071-70421090 Msa1211060:intron 45.0%
!!! TGATTTTTGGTGGGGGAAAG+AGG - chr8_1:70421195-70421214 None:intergenic 45.0%
!! GAAATAGGTTGGTGGGTTAG+TGG - chr8_1:70421234-70421253 None:intergenic 45.0%
! AGTGTTGGAACAAGAGGAGA+AGG + chr8_1:70421565-70421584 Msa1211060:intron 45.0%
AAACTTACCTTGCGAGGTGT+TGG - chr8_1:70421717-70421736 None:intergenic 45.0%
GCATGACGATCATATTGCCA+AGG - chr8_1:70421980-70421999 None:intergenic 45.0%
ACTTGGACTTTCGCTTCCAA+AGG + chr8_1:70422111-70422130 Msa1211060:intron 45.0%
GCTTCCAAAGGAACCATTCA+AGG + chr8_1:70422123-70422142 Msa1211060:intron 45.0%
TCCAATTCCTAAGCCACCTT+GGG + chr8_1:70422171-70422190 Msa1211060:intron 45.0%
ATAGTAACATCCTCCCAAGG+TGG - chr8_1:70422187-70422206 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG - chr8_1:70420217-70420236 None:intergenic 45.0%
CGGAATTGAACTTGTACCAC+CGG - chr8_1:70418968-70418987 None:intergenic 45.0%
TTTGGCGCCACTAGATAACT+CGG - chr8_1:70418988-70419007 None:intergenic 45.0%
AGTCAGATTATAGTGCGGTG+CGG + chr8_1:70419200-70419219 Msa1211060:intron 45.0%
CTATTAGGCTCAGTTTGGCA+AGG - chr8_1:70419587-70419606 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG - chr8_1:70420217-70420236 None:intergenic 45.0%
TGGTTCAGGGACAAAAGGAA+AGG - chr8_1:70420317-70420336 None:intergenic 45.0%
! CTGATGCCAAATCTGGTTCA+GGG - chr8_1:70420330-70420349 None:intergenic 45.0%
! TCTGATGCCAAATCTGGTTC+AGG - chr8_1:70420331-70420350 None:intergenic 45.0%
TTCGCTTAAACTCAACTCCG+AGG - chr8_1:70420367-70420386 None:intergenic 45.0%
! GTGTTAGCTTCGCGAACAAA+TGG - chr8_1:70420566-70420585 None:intergenic 45.0%
!! GGTGGCATTTTGACAATGGT+GGG - chr8_1:70420655-70420674 None:intergenic 45.0%
!! AGGTGGCATTTTGACAATGG+TGG - chr8_1:70420656-70420675 None:intergenic 45.0%
! CAACGTCCAACAAGCCTTAT+TGG + chr8_1:70420756-70420775 Msa1211060:intron 45.0%
GTGCTTCCAATAAGGCTTGT+TGG - chr8_1:70420765-70420784 None:intergenic 45.0%
GAAGAGCAAGATCAAGACGT+GGG + chr8_1:70421071-70421090 Msa1211060:intron 45.0%
!!! TGATTTTTGGTGGGGGAAAG+AGG - chr8_1:70421195-70421214 None:intergenic 45.0%
!! GAAATAGGTTGGTGGGTTAG+TGG - chr8_1:70421234-70421253 None:intergenic 45.0%
! AGTGTTGGAACAAGAGGAGA+AGG + chr8_1:70421565-70421584 Msa1211060:intron 45.0%
AAACTTACCTTGCGAGGTGT+TGG - chr8_1:70421717-70421736 None:intergenic 45.0%
GCATGACGATCATATTGCCA+AGG - chr8_1:70421980-70421999 None:intergenic 45.0%
ACTTGGACTTTCGCTTCCAA+AGG + chr8_1:70422111-70422130 Msa1211060:intron 45.0%
GCTTCCAAAGGAACCATTCA+AGG + chr8_1:70422123-70422142 Msa1211060:intron 45.0%
TCCAATTCCTAAGCCACCTT+GGG + chr8_1:70422171-70422190 Msa1211060:intron 45.0%
ATAGTAACATCCTCCCAAGG+TGG - chr8_1:70422187-70422206 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG - chr8_1:70420217-70420236 None:intergenic 45.0%
! AAGCACTTGACAGTGGGTTT+GGG - chr8_1:70427091-70427110 None:intergenic 45.0%
! TAAGCACTTGACAGTGGGTT+TGG - chr8_1:70427092-70427111 None:intergenic 45.0%
TGGTCTAAGCACTTGACAGT+GGG - chr8_1:70427097-70427116 None:intergenic 45.0%
ATGTTATATGGGCCTGGATC+TGG + chr8_1:70427319-70427338 Msa1211060:CDS 45.0%
TGTTATATGGGCCTGGATCT+GGG + chr8_1:70427320-70427339 Msa1211060:CDS 45.0%
ATAAGATTCTCATTCGCGGG+AGG - chr8_1:70427443-70427462 None:intergenic 45.0%
TCCCGCGAATGAGAATCTTA+TGG + chr8_1:70427442-70427461 Msa1211060:CDS 45.0%
TCGTAATGATTGATGCCTGC+AGG + chr8_1:70427471-70427490 Msa1211060:CDS 45.0%
! CGGTTATCAGTAATGGAGCA+TGG - chr8_1:70427878-70427897 None:intergenic 45.0%
CTCCCAAAAGCTTAACCTGT+TGG + chr8_1:70427975-70427994 Msa1211060:intron 45.0%
TACATGAGCCTTAACCCAAC+AGG - chr8_1:70427993-70428012 None:intergenic 45.0%
TCAACTCGGAAATGAGAGTG+CGG - chr8_1:70428018-70428037 None:intergenic 45.0%
GGTAATCGAGTATAACAGGC+TGG - chr8_1:70428976-70428995 None:intergenic 45.0%
ATAGTTGTCTCGCCAGATGT+TGG + chr8_1:70429028-70429047 Msa1211060:CDS 45.0%
!! GTTTTGAGCCACCGATCTAA+GGG - chr8_1:70429417-70429436 None:intergenic 45.0%
AGCGGATCACTGATAAGACT+TGG - chr8_1:70430402-70430421 None:intergenic 45.0%
ATGCAAAAGAGCTGCTCCTT+TGG - chr8_1:70430460-70430479 None:intergenic 45.0%
! GCAGCTCTTTTGCATCAAGA+AGG + chr8_1:70430465-70430484 Msa1211060:CDS 45.0%
AAGTATGTCTGGGTACGAGT+TGG + chr8_1:70430710-70430729 Msa1211060:intron 45.0%
GACAATCTCTCTATAGCAGG+AGG - chr8_1:70430922-70430941 None:intergenic 45.0%
TCGATGCCCAAACTGGAATA+AGG - chr8_1:70431472-70431491 None:intergenic 45.0%
TGTTCAATCGATGCCCAAAC+TGG - chr8_1:70431479-70431498 None:intergenic 45.0%
TAAGCTGGAACAGCAGAACA+TGG - chr8_1:70431513-70431532 None:intergenic 45.0%
ACCCCAAACAGCTCTCTAAA+AGG - chr8_1:70431609-70431628 None:intergenic 45.0%
!! TTTCAAAAAATAAAATAAAA+TGG - chr8_1:70419677-70419696 None:intergenic 5.0%
!! TTTCAAAAAATAAAATAAAA+TGG - chr8_1:70419677-70419696 None:intergenic 5.0%
!!! AACTATAATATATTTTTTAT+TGG + chr8_1:70427585-70427604 Msa1211060:intron 5.0%
!!! AAAAAATAAATATATTTTTC+TGG - chr8_1:70428080-70428099 None:intergenic 5.0%
AGGGAGAAACGAGGAGTGAT+AGG - chr8_1:70418770-70418789 None:intergenic 50.0%
AGAGTTACTTACGACGACGG+CGG - chr8_1:70418804-70418823 None:intergenic 50.0%
AACGCGAAGAGAGAGAGAGA+GGG - chr8_1:70418831-70418850 None:intergenic 50.0%
TATGAAGCATGGACCCTCCT+CGG - chr8_1:70419398-70419417 None:intergenic 50.0%
AGGCTCACCACCAAGTGTTT+AGG + chr8_1:70420207-70420226 Msa1211060:intron 50.0%
ACCAGATTTGGCATCAGAGC+TGG + chr8_1:70420333-70420352 Msa1211060:intron 50.0%
! ACCAGCTCTGATGCCAAATC+TGG - chr8_1:70420337-70420356 None:intergenic 50.0%
CAGAGCTGGTTACGATACCT+CGG + chr8_1:70420347-70420366 Msa1211060:intron 50.0%
!! GTGCGTGGTTGTTTTGTTGG+TGG - chr8_1:70420588-70420607 None:intergenic 50.0%
TTCACAACGATGCCACCTTC+AGG + chr8_1:70420846-70420865 Msa1211060:intron 50.0%
GGAAGAGCAAGATCAAGACG+TGG + chr8_1:70421070-70421089 Msa1211060:intron 50.0%
AGACGTGGGACAAAATGCGT+CGG + chr8_1:70421085-70421104 Msa1211060:intron 50.0%
! TTTTGGTGGGGGAAAGAGGT+TGG - chr8_1:70421191-70421210 None:intergenic 50.0%
CTTGCCACATTCATCTTGGG+AGG + chr8_1:70421954-70421973 Msa1211060:intron 50.0%
AAGGCCTCCCAAGATGAATG+TGG - chr8_1:70421961-70421980 None:intergenic 50.0%
ACATTCATCTTGGGAGGCCT+TGG + chr8_1:70421960-70421979 Msa1211060:intron 50.0%
GTCCAATTCCTAAGCCACCT+TGG + chr8_1:70422170-70422189 Msa1211060:intron 50.0%
TCCCAAGGTGGCTTAGGAAT+TGG - chr8_1:70422175-70422194 None:intergenic 50.0%
AATTCCTAAGCCACCTTGGG+AGG + chr8_1:70422174-70422193 Msa1211060:intron 50.0%
AGGCTCACCACCAAGTGTTT+AGG + chr8_1:70420207-70420226 Msa1211060:intron 50.0%
TGGCTCAGGGACAAAAGGAA+AGG - chr8_1:70422711-70422730 None:intergenic 50.0%
!! TTGGTTTTCTCCTCCAAGGG+TGG - chr8_1:70422731-70422750 None:intergenic 50.0%
AACGCGAAGAGAGAGAGAGA+GGG - chr8_1:70418831-70418850 None:intergenic 50.0%
TATGAAGCATGGACCCTCCT+CGG - chr8_1:70419398-70419417 None:intergenic 50.0%
AGGCTCACCACCAAGTGTTT+AGG + chr8_1:70420207-70420226 Msa1211060:intron 50.0%
ACCAGATTTGGCATCAGAGC+TGG + chr8_1:70420333-70420352 Msa1211060:intron 50.0%
! ACCAGCTCTGATGCCAAATC+TGG - chr8_1:70420337-70420356 None:intergenic 50.0%
CAGAGCTGGTTACGATACCT+CGG + chr8_1:70420347-70420366 Msa1211060:intron 50.0%
!! GTGCGTGGTTGTTTTGTTGG+TGG - chr8_1:70420588-70420607 None:intergenic 50.0%
TTCACAACGATGCCACCTTC+AGG + chr8_1:70420846-70420865 Msa1211060:intron 50.0%
GGAAGAGCAAGATCAAGACG+TGG + chr8_1:70421070-70421089 Msa1211060:intron 50.0%
AGACGTGGGACAAAATGCGT+CGG + chr8_1:70421085-70421104 Msa1211060:intron 50.0%
! TTTTGGTGGGGGAAAGAGGT+TGG - chr8_1:70421191-70421210 None:intergenic 50.0%
CTTGCCACATTCATCTTGGG+AGG + chr8_1:70421954-70421973 Msa1211060:intron 50.0%
AAGGCCTCCCAAGATGAATG+TGG - chr8_1:70421961-70421980 None:intergenic 50.0%
ACATTCATCTTGGGAGGCCT+TGG + chr8_1:70421960-70421979 Msa1211060:intron 50.0%
GTCCAATTCCTAAGCCACCT+TGG + chr8_1:70422170-70422189 Msa1211060:intron 50.0%
TCCCAAGGTGGCTTAGGAAT+TGG - chr8_1:70422175-70422194 None:intergenic 50.0%
AATTCCTAAGCCACCTTGGG+AGG + chr8_1:70422174-70422193 Msa1211060:intron 50.0%
AGGCTCACCACCAAGTGTTT+AGG + chr8_1:70420207-70420226 Msa1211060:intron 50.0%
TGGCTCAGGGACAAAAGGAA+AGG - chr8_1:70422711-70422730 None:intergenic 50.0%
!! TTGGTTTTCTCCTCCAAGGG+TGG - chr8_1:70422731-70422750 None:intergenic 50.0%
CTGGTCTAAGCACTTGACAG+TGG - chr8_1:70427098-70427117 None:intergenic 50.0%
!! TCCAACTGCAAGAGAGTGTC+AGG + chr8_1:70427384-70427403 Msa1211060:CDS 50.0%
!! CCAACTGCAAGAGAGTGTCA+GGG + chr8_1:70427385-70427404 Msa1211060:CDS 50.0%
!! CAACTGCAAGAGAGTGTCAG+GGG + chr8_1:70427386-70427405 Msa1211060:CDS 50.0%
!! AACTGCAAGAGAGTGTCAGG+GGG + chr8_1:70427387-70427406 Msa1211060:CDS 50.0%
!! TTTCTGGCTGAGACAGTCAC+TGG - chr8_1:70428064-70428083 None:intergenic 50.0%
TTGCATGTGACCTCCACTCT+GGG + chr8_1:70428490-70428509 Msa1211060:CDS 50.0%
CGAGTATAACAGGCTGGTAG+TGG - chr8_1:70428970-70428989 None:intergenic 50.0%
CTAGCTACACCACCAACATC+TGG - chr8_1:70429043-70429062 None:intergenic 50.0%
TCATGGGCATAATGTTGCCG+AGG + chr8_1:70429123-70429142 Msa1211060:CDS 50.0%
CTCTATGACCCTTAGATCGG+TGG + chr8_1:70429406-70429425 Msa1211060:intron 50.0%
!! CGTTTTGAGCCACCGATCTA+AGG - chr8_1:70429418-70429437 None:intergenic 50.0%
GAGATCCTAATCAGGTACGC+TGG + chr8_1:70429775-70429794 Msa1211060:intron 50.0%
CTTATAGGGACCATCGCCAA+AGG + chr8_1:70430441-70430460 Msa1211060:intron 50.0%
!! GCACAACACACGCTGTTTTC+AGG + chr8_1:70430508-70430527 Msa1211060:CDS 50.0%
GTCATCGTGAACACGCCATA+TGG - chr8_1:70431052-70431071 None:intergenic 50.0%
GAACGCGAAGAGAGAGAGAG+AGG - chr8_1:70418832-70418851 None:intergenic 55.0%
GATGATACCTGAGCGAGTGC+GGG - chr8_1:70419072-70419091 None:intergenic 55.0%
GGATGATACCTGAGCGAGTG+CGG - chr8_1:70419073-70419092 None:intergenic 55.0%
!! GCGGTGCGTGGTTGTTTTGT+TGG - chr8_1:70420591-70420610 None:intergenic 55.0%
!! CTTGCGAGGTGTTGGAAGTG+TGG - chr8_1:70421709-70421728 None:intergenic 55.0%
CACACTTCCAACACCTCGCA+AGG + chr8_1:70421707-70421726 Msa1211060:intron 55.0%
GGTGGCTTAGGAATTGGACG+AGG - chr8_1:70422169-70422188 None:intergenic 55.0%
ACATCCTCCCAAGGTGGCTT+AGG - chr8_1:70422181-70422200 None:intergenic 55.0%
AGGACGAGTCTCTTCCAACC+CGG + chr8_1:70422330-70422349 Msa1211060:intron 55.0%
CTCTATCATTCTCCCCGGGT+TGG - chr8_1:70422347-70422366 None:intergenic 55.0%
AAGGGTGGCTCAGGGACAAA+AGG - chr8_1:70422716-70422735 None:intergenic 55.0%
! TTTTGTCCCTGAGCCACCCT+TGG + chr8_1:70422715-70422734 Msa1211060:intron 55.0%
GAACGCGAAGAGAGAGAGAG+AGG - chr8_1:70418832-70418851 None:intergenic 55.0%
GATGATACCTGAGCGAGTGC+GGG - chr8_1:70419072-70419091 None:intergenic 55.0%
GGATGATACCTGAGCGAGTG+CGG - chr8_1:70419073-70419092 None:intergenic 55.0%
!! GCGGTGCGTGGTTGTTTTGT+TGG - chr8_1:70420591-70420610 None:intergenic 55.0%
!! CTTGCGAGGTGTTGGAAGTG+TGG - chr8_1:70421709-70421728 None:intergenic 55.0%
CACACTTCCAACACCTCGCA+AGG + chr8_1:70421707-70421726 Msa1211060:intron 55.0%
GGTGGCTTAGGAATTGGACG+AGG - chr8_1:70422169-70422188 None:intergenic 55.0%
ACATCCTCCCAAGGTGGCTT+AGG - chr8_1:70422181-70422200 None:intergenic 55.0%
AGGACGAGTCTCTTCCAACC+CGG + chr8_1:70422330-70422349 Msa1211060:intron 55.0%
CTCTATCATTCTCCCCGGGT+TGG - chr8_1:70422347-70422366 None:intergenic 55.0%
AAGGGTGGCTCAGGGACAAA+AGG - chr8_1:70422716-70422735 None:intergenic 55.0%
! TTTTGTCCCTGAGCCACCCT+TGG + chr8_1:70422715-70422734 Msa1211060:intron 55.0%
CCCTGACACTCTCTTGCAGT+TGG - chr8_1:70427388-70427407 None:intergenic 55.0%
TCATTCGCGGGAGGACATGT+AGG - chr8_1:70427434-70427453 None:intergenic 55.0%
TTTGGCAGAAGCTCTCCTGC+AGG - chr8_1:70427489-70427508 None:intergenic 55.0%
CTTGCATGTGACCTCCACTC+TGG + chr8_1:70428489-70428508 Msa1211060:CDS 55.0%
CTCCACTCTGGGCAGTCTAT+GGG + chr8_1:70428501-70428520 Msa1211060:CDS 55.0%
GTTGTCTCGCCAGATGTTGG+TGG + chr8_1:70429031-70429050 Msa1211060:CDS 55.0%
CAGGTCCAGCGTACCTGATT+AGG - chr8_1:70429783-70429802 None:intergenic 55.0%
ATCTCCAGCACAGCCTTGAC+AGG - chr8_1:70429802-70429821 None:intergenic 55.0%
AAGAGCTGCTCCTTTGGCGA+TGG - chr8_1:70430454-70430473 None:intergenic 55.0%
ACCTTCTGGGCGAGACCATA+TGG + chr8_1:70431034-70431053 Msa1211060:CDS 55.0%
GTTACTTACGACGACGGCGG+CGG - chr8_1:70418801-70418820 None:intergenic 60.0%
TACCTGAGCGAGTGCGGGAT+TGG - chr8_1:70419067-70419086 None:intergenic 60.0%
TGTCAGTGCCCGTGCTTGTC+AGG - chr8_1:70419299-70419318 None:intergenic 60.0%
ACACCGACACGTCTAAGCCG+AGG + chr8_1:70419378-70419397 Msa1211060:intron 60.0%
CCTCCTCGGCTTAGACGTGT+CGG - chr8_1:70419384-70419403 None:intergenic 60.0%
CGACACGTCTAAGCCGAGGA+GGG + chr8_1:70419382-70419401 Msa1211060:intron 60.0%
GTGAAGATTGTGGCGGTGCG+TGG - chr8_1:70420603-70420622 None:intergenic 60.0%
GGACGAGTCTCTTCCAACCC+GGG + chr8_1:70422331-70422350 Msa1211060:intron 60.0%
GACGAGTCTCTTCCAACCCG+GGG + chr8_1:70422332-70422351 Msa1211060:intron 60.0%
TCTCCTCCAAGGGTGGCTCA+GGG - chr8_1:70422724-70422743 None:intergenic 60.0%
TTCTCCTCCAAGGGTGGCTC+AGG - chr8_1:70422725-70422744 None:intergenic 60.0%
TACCTGAGCGAGTGCGGGAT+TGG - chr8_1:70419067-70419086 None:intergenic 60.0%
TGTCAGTGCCCGTGCTTGTC+AGG - chr8_1:70419299-70419318 None:intergenic 60.0%
ACACCGACACGTCTAAGCCG+AGG + chr8_1:70419378-70419397 Msa1211060:intron 60.0%
CCTCCTCGGCTTAGACGTGT+CGG - chr8_1:70419384-70419403 None:intergenic 60.0%
CGACACGTCTAAGCCGAGGA+GGG + chr8_1:70419382-70419401 Msa1211060:intron 60.0%
GTGAAGATTGTGGCGGTGCG+TGG - chr8_1:70420603-70420622 None:intergenic 60.0%
GGACGAGTCTCTTCCAACCC+GGG + chr8_1:70422331-70422350 Msa1211060:intron 60.0%
GACGAGTCTCTTCCAACCCG+GGG + chr8_1:70422332-70422351 Msa1211060:intron 60.0%
TCTCCTCCAAGGGTGGCTCA+GGG - chr8_1:70422724-70422743 None:intergenic 60.0%
TTCTCCTCCAAGGGTGGCTC+AGG - chr8_1:70422725-70422744 None:intergenic 60.0%
CCATAGACTGCCCAGAGTGG+AGG - chr8_1:70428503-70428522 None:intergenic 60.0%
CCTCCACTCTGGGCAGTCTA+TGG + chr8_1:70428500-70428519 Msa1211060:CDS 60.0%
AGCCCATAGACTGCCCAGAG+TGG - chr8_1:70428506-70428525 None:intergenic 60.0%
CAGGTACGCTGGACCTGTCA+AGG + chr8_1:70429786-70429805 Msa1211060:intron 60.0%
TGGACCTGTCAAGGCTGTGC+TGG + chr8_1:70429795-70429814 Msa1211060:intron 60.0%
GCCATATGGTCTCGCCCAGA+AGG - chr8_1:70431038-70431057 None:intergenic 60.0%
GCGTTGCGGAGGGAGAAACG+AGG - chr8_1:70418779-70418798 None:intergenic 65.0%
CTGAGCGAGTGCGGGATTGG+CGG - chr8_1:70419064-70419083 None:intergenic 65.0%
CCGACACGTCTAAGCCGAGG+AGG + chr8_1:70419381-70419400 Msa1211060:intron 65.0%
TGTCCCTGAGCCACCCTTGG+AGG + chr8_1:70422718-70422737 Msa1211060:intron 65.0%
CTGAGCGAGTGCGGGATTGG+CGG - chr8_1:70419064-70419083 None:intergenic 65.0%
CCGACACGTCTAAGCCGAGG+AGG + chr8_1:70419381-70419400 Msa1211060:intron 65.0%
TGTCCCTGAGCCACCCTTGG+AGG + chr8_1:70422718-70422737 Msa1211060:intron 65.0%
CGCCAATCCCGCACTCGCTC+AGG + chr8_1:70419062-70419081 Msa1211060:CDS 70.0%
CGCCAATCCCGCACTCGCTC+AGG + chr8_1:70419062-70419081 Msa1211060:CDS 70.0%
! GACGGCGGCGGCGTTGCGGA+GGG - chr8_1:70418789-70418808 None:intergenic 80.0%
! CGACGACGGCGGCGGCGTTG+CGG - chr8_1:70418793-70418812 None:intergenic 80.0%
! CGACGGCGGCGGCGTTGCGG+AGG - chr8_1:70418790-70418809 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 70418624 70431863 70418624 ID=Msa1211060;Name=Msa1211060
chr8_1 mRNA 70418624 70431863 70418624 ID=Msa1211060-mRNA-1;Parent=Msa1211060;Name=Msa1211060-mRNA-1;_AED=0.19;_eAED=0.19;_QI=92|1|1|1|1|1|10|368|463
chr8_1 exon 70418624 70418811 70418624 ID=Msa1211060-mRNA-1:exon:23563;Parent=Msa1211060-mRNA-1
chr8_1 exon 70418892 70419083 70418892 ID=Msa1211060-mRNA-1:exon:23564;Parent=Msa1211060-mRNA-1
chr8_1 exon 70422977 70423168 70422977 ID=Msa1211060-mRNA-1:exon:23565;Parent=Msa1211060-mRNA-1
chr8_1 exon 70427311 70427559 70427311 ID=Msa1211060-mRNA-1:exon:23566;Parent=Msa1211060-mRNA-1
chr8_1 exon 70428417 70428560 70428417 ID=Msa1211060-mRNA-1:exon:23567;Parent=Msa1211060-mRNA-1
chr8_1 exon 70428977 70429144 70428977 ID=Msa1211060-mRNA-1:exon:23568;Parent=Msa1211060-mRNA-1
chr8_1 exon 70429288 70429357 70429288 ID=Msa1211060-mRNA-1:exon:23569;Parent=Msa1211060-mRNA-1
chr8_1 exon 70430448 70430529 70430448 ID=Msa1211060-mRNA-1:exon:23570;Parent=Msa1211060-mRNA-1
chr8_1 exon 70430918 70431077 70430918 ID=Msa1211060-mRNA-1:exon:23571;Parent=Msa1211060-mRNA-1
chr8_1 exon 70431457 70431863 70431457 ID=Msa1211060-mRNA-1:exon:23572;Parent=Msa1211060-mRNA-1
chr8_1 five_prime_UTR 70418624 70418715 70418624 ID=Msa1211060-mRNA-1:five_prime_utr;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70418716 70418811 70418716 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70418892 70419083 70418892 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70422977 70423168 70422977 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70427311 70427559 70427311 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70428417 70428560 70428417 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70428977 70429144 70428977 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70429288 70429357 70429288 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70430448 70430529 70430448 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70430918 70431077 70430918 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 CDS 70431457 70431495 70431457 ID=Msa1211060-mRNA-1:cds;Parent=Msa1211060-mRNA-1
chr8_1 three_prime_UTR 70431496 70431863 70431496 ID=Msa1211060-mRNA-1:three_prime_utr;Parent=Msa1211060-mRNA-1
Gene Sequence

>Msa1211060

ATGTCCACTCTACTTCAATCTTCTTTCATTTCTTCTTCGTCTTCATTCTCTCCTATCACTCCTCGTTTCTCCCTCCGCAACGCCGCCGCCGTCGTCAGATGTAATAATGTAGTACAATCTGTCAATCTGGAAAACGGAAAACCGTACCGTTCAACTGAATATTCAGTTACCGGTGGTACAAGTTCAATTCCGAGTTATCTAGTGGCGCCAAACACTCGTATTCATGATCTCGTTAACAAGAATCGTCTTCGTATTTTCTCTGGCACCGCCAATCCCGCACTCGCTCAGAGATGTAATAATGTAGTACAATCTGTCAATCTGGAAAACGGAAAACCGTACCGTTCAACTGAATATTCAGTTACCGGTGGTACAAGTTCAATTCCGAGTTATCTAGTGGCGCCAAACACTCGTATTCATGATCTCGTTAACAAGAATCGTCTTCGTATTTTCTCTGGCACCGCCAATCCCGCACTCGCTCAGGAAATTGCATGTTATATGGGCCTGGATCTGGGAAAAATTAAGATAAAACGTTTTGCCGATGGGGAGATATATGTCCAACTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCTACATGTCCTCCCGCGAATGAGAATCTTATGGAGCTTCTCGTAATGATTGATGCCTGCAGGAGAGCTTCTGCCAAAAATATTACTGCAGTCATTCCATATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCTGGTGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCTATGGGCTACTTCGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTCGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGATAGTTGTCTCGCCAGATGTTGGTGGTGTAGCTAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCAATTGTTGATAAAAGACGTCATGGGCATAATGTTGCCGAGGTGATGAATTTGATTGGTGATGTAAAAGGAAAGGTAGCAGTGATGGTAGATGACATGATTGATACTGCTGGGACCATCGCCAAAGGAGCAGCTCTTTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACAACACACGCTGTTTTCAGCCCTCCTGCTATAGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCACTAGCAGAGAAGAACTACTTCCCCCAATTAACTGTCTTATCAGTAGCAAACCTTCTGGGCGAGACCATATGGCGTGTTCACGATGACTGCTCAGGTGGAATTGAACCTTATTCCAGTTTGGGCATCGATTGA

Protein sequence

>Msa1211060

MSTLLQSSFISSSSSFSPITPRFSLRNAAAVVRCNNVVQSVNLENGKPYRSTEYSVTGGTSSIPSYLVAPNTRIHDLVNKNRLRIFSGTANPALAQRCNNVVQSVNLENGKPYRSTEYSVTGGTSSIPSYLVAPNTRIHDLVNKNRLRIFSGTANPALAQEIACYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLIVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPLAEKNYFPQLTVLSVANLLGETIWRVHDDCSGGIEPYSSLGID*