Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464160 | XP_003601057.1 | 97.933 | 387 | 8 | 0 | 1 | 387 | 1 | 387 | 0.0 | 784 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464160 | sp|Q9SUF1|WTR31_ARATH | 48.056 | 360 | 177 | 3 | 9 | 368 | 12 | 361 | 9.39e-121 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464160 | G7J315 | 97.933 | 387 | 8 | 0 | 1 | 387 | 1 | 387 | 0.0 | 784 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0464160 | 0.805376 | 1.375362e-49 | -8.615850e-47 |
| Msa0012380 | Msa0464160 | -0.800235 | 1.585085e-48 | -8.615850e-47 |
| Msa0036550 | Msa0464160 | 0.847303 | 1.259804e-59 | -8.615850e-47 |
| Msa0043840 | Msa0464160 | 0.807394 | 5.164303e-50 | -8.615850e-47 |
| Msa0043990 | Msa0464160 | 0.814253 | 1.692398e-51 | -8.615850e-47 |
| Msa0045620 | Msa0464160 | 0.812517 | 4.073754e-51 | -8.615850e-47 |
| Msa0046050 | Msa0464160 | -0.835154 | 1.979784e-56 | -8.615850e-47 |
| Msa0050530 | Msa0464160 | 0.806118 | 9.605763e-50 | -8.615850e-47 |
| Msa0078200 | Msa0464160 | 0.813822 | 2.107114e-51 | -8.615850e-47 |
| Msa0081790 | Msa0464160 | -0.817098 | 3.933432e-52 | -8.615850e-47 |
| Msa0130710 | Msa0464160 | 0.844552 | 7.045438e-59 | -8.615850e-47 |
| Msa0136090 | Msa0464160 | 0.835294 | 1.824130e-56 | -8.615850e-47 |
| Msa0137010 | Msa0464160 | -0.822713 | 2.044792e-53 | -8.615850e-47 |
| Msa0175210 | Msa0464160 | -0.806972 | 6.345505e-50 | -8.615850e-47 |
| Msa0176600 | Msa0464160 | 0.844450 | 7.503166e-59 | -8.615850e-47 |
| Msa0219840 | Msa0464160 | 0.811889 | 5.584892e-51 | -8.615850e-47 |
| Msa0369880 | Msa0464160 | 0.853322 | 2.579874e-61 | -8.615850e-47 |
| Msa0404070 | Msa0464160 | -0.826060 | 3.337609e-54 | -8.615850e-47 |
| Msa0417290 | Msa0464160 | 0.907223 | 6.393949e-81 | -8.615850e-47 |
| Msa0430040 | Msa0464160 | -0.818998 | 1.462391e-52 | -8.615850e-47 |
| Msa0437550 | Msa0464160 | -0.833717 | 4.541892e-56 | -8.615850e-47 |
| Msa0437790 | Msa0464160 | -0.843499 | 1.349502e-58 | -8.615850e-47 |
| Msa0460220 | Msa0464160 | -0.807074 | 6.036890e-50 | -8.615850e-47 |
| Msa0464160 | Msa0468360 | -0.816073 | 6.672740e-52 | -8.615850e-47 |
| Msa0464160 | Msa0509630 | 0.967788 | 9.194644e-128 | -8.615850e-47 |
| Msa0464160 | Msa0556070 | -0.801410 | 9.125561e-49 | -8.615850e-47 |
| Msa0464160 | Msa0566090 | -0.811996 | 5.293862e-51 | -8.615850e-47 |
| Msa0464160 | Msa0576500 | -0.802031 | 6.803651e-49 | -8.615850e-47 |
| Msa0464160 | Msa0584970 | 0.810137 | 1.338369e-50 | -8.615850e-47 |
| Msa0464160 | Msa0614980 | -0.802893 | 4.520098e-49 | -8.615850e-47 |
| Msa0464160 | Msa0619390 | -0.802000 | 6.904336e-49 | -8.615850e-47 |
| Msa0464160 | Msa0623310 | 0.811551 | 6.615484e-51 | -8.615850e-47 |
| Msa0464160 | Msa0644630 | -0.819948 | 8.881990e-53 | -8.615850e-47 |
| Msa0464160 | Msa0659300 | 0.802276 | 6.058037e-49 | -8.615850e-47 |
| Msa0464160 | Msa0673940 | 0.804567 | 2.030293e-49 | -8.615850e-47 |
| Msa0464160 | Msa0676140 | 0.806742 | 7.095043e-50 | -8.615850e-47 |
| Msa0464160 | Msa0676190 | 0.801488 | 8.794882e-49 | -8.615850e-47 |
| Msa0464160 | Msa0676200 | 0.843619 | 1.253402e-58 | -8.615850e-47 |
| Msa0464160 | Msa0705810 | -0.832076 | 1.161799e-55 | -8.615850e-47 |
| Msa0464160 | Msa0708020 | 0.803425 | 3.508427e-49 | -8.615850e-47 |
| Msa0464160 | Msa0708980 | 0.803181 | 3.939570e-49 | -8.615850e-47 |
| Msa0464160 | Msa0715510 | 0.823276 | 1.511025e-53 | -8.615850e-47 |
| Msa0464160 | Msa0738410 | 0.807762 | 4.314299e-50 | -8.615850e-47 |
| Msa0464160 | Msa0742090 | -0.801429 | 9.042426e-49 | -8.615850e-47 |
| Msa0464160 | Msa0793100 | -0.806766 | 7.014590e-50 | -8.615850e-47 |
| Msa0464160 | Msa0823310 | -0.810583 | 1.072586e-50 | -8.615850e-47 |
| Msa0464160 | Msa0871420 | 0.814242 | 1.702105e-51 | -8.615850e-47 |
| Msa0464160 | Msa0936630 | 0.806554 | 7.776539e-50 | -8.615850e-47 |
| Msa0464160 | Msa0982960 | 0.808187 | 3.502447e-50 | -8.615850e-47 |
| Msa0464160 | Msa1084800 | 0.812874 | 3.404335e-51 | -8.615850e-47 |
| Msa0464160 | Msa1133440 | -0.818296 | 2.111230e-52 | -8.615850e-47 |
| Msa0464160 | Msa1150860 | 0.828987 | 6.623812e-55 | -8.615850e-47 |
| Msa0464160 | Msa1162360 | 0.801743 | 7.797493e-49 | -8.615850e-47 |
| Msa0464160 | Msa1166960 | -0.801141 | 1.035522e-48 | -8.615850e-47 |
| Msa0464160 | Msa1219060 | -0.802971 | 4.354354e-49 | -8.615850e-47 |
| Msa0464160 | Msa1223620 | 0.806194 | 9.261098e-50 | -8.615850e-47 |
| Msa0464160 | Msa1263520 | 0.808566 | 2.908463e-50 | -8.615850e-47 |
| Msa0464160 | Msa1359890 | -0.812066 | 5.110833e-51 | -8.615850e-47 |
| Msa0464160 | Msa1362590 | 0.823545 | 1.307252e-53 | -8.615850e-47 |
| Msa0464160 | Msa1363690 | 0.829023 | 6.490440e-55 | -8.615850e-47 |
| Msa0464160 | Msa1369180 | -0.829876 | 4.026659e-55 | -8.615850e-47 |
| Msa0464160 | Msa1371800 | 0.814048 | 1.879015e-51 | -8.615850e-47 |
| Msa0464160 | Msa1372030 | 0.814859 | 1.243148e-51 | -8.615850e-47 |
| Msa0464160 | Msa1373390 | -0.835573 | 1.550857e-56 | -8.615850e-47 |
| Msa0464160 | Msa1375780 | -0.818483 | 1.914596e-52 | -8.615850e-47 |
| Msa0464160 | Msa1376310 | 0.809110 | 2.225290e-50 | -8.615850e-47 |
| Msa0464160 | Msa1377140 | 0.803863 | 2.845567e-49 | -8.615850e-47 |
| Msa0464160 | Msa1378400 | 0.805236 | 1.471356e-49 | -8.615850e-47 |
| Msa0464160 | Msa1387480 | 0.801560 | 8.499175e-49 | -8.615850e-47 |
| Msa0464160 | Msa1395720 | 0.836875 | 7.241558e-57 | -8.615850e-47 |
| Msa0464160 | Msa1396550 | 0.823427 | 1.393350e-53 | -8.615850e-47 |
| Msa0464160 | Msa1427600 | -0.805130 | 1.548352e-49 | -8.615850e-47 |
| Msa0464160 | Msa1450630 | -0.801573 | 8.447490e-49 | -8.615850e-47 |
| Msa0464160 | Msa1453030 | 0.803827 | 2.894267e-49 | -8.615850e-47 |
| Msa0253160 | Msa0464160 | -0.826954 | 2.043142e-54 | -8.615850e-47 |
| Msa0264710 | Msa0464160 | 0.800103 | 1.686350e-48 | -8.615850e-47 |
| Msa0267710 | Msa0464160 | 0.810274 | 1.250252e-50 | -8.615850e-47 |
| Msa0269240 | Msa0464160 | 0.803273 | 3.771582e-49 | -8.615850e-47 |
| Msa0276800 | Msa0464160 | -0.803518 | 3.354861e-49 | -8.615850e-47 |
| Msa0291940 | Msa0464160 | -0.828489 | 8.740445e-55 | -8.615850e-47 |
| Msa0303920 | Msa0464160 | 0.825094 | 5.654762e-54 | -8.615850e-47 |
| Msa0316720 | Msa0464160 | -0.800197 | 1.613847e-48 | -8.615850e-47 |
| Msa0336430 | Msa0464160 | 0.823499 | 1.340472e-53 | -8.615850e-47 |
| Msa0336520 | Msa0464160 | 0.837618 | 4.673059e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464160 | MtrunA17_Chr3g0114701 | 97.933 | 387 | 8 | 0 | 1 | 387 | 1 | 387 | 0.0 | 784 |
| Msa0464160 | MtrunA17_Chr1g0160181 | 67.018 | 379 | 120 | 2 | 1 | 379 | 10 | 383 | 0.0 | 512 |
| Msa0464160 | MtrunA17_Chr3g0114731 | 52.210 | 362 | 162 | 4 | 7 | 368 | 16 | 366 | 3.76e-134 | 389 |
| Msa0464160 | MtrunA17_Chr3g0114711 | 48.232 | 396 | 152 | 6 | 5 | 359 | 10 | 393 | 1.00e-124 | 365 |
| Msa0464160 | MtrunA17_Chr1g0177221 | 65.234 | 256 | 86 | 1 | 3 | 258 | 12 | 264 | 2.57e-119 | 347 |
| Msa0464160 | MtrunA17_Chr1g0160171 | 44.865 | 370 | 192 | 4 | 1 | 363 | 8 | 372 | 2.28e-111 | 330 |
| Msa0464160 | MtrunA17_Chr7g0255561 | 45.482 | 332 | 178 | 2 | 3 | 332 | 8 | 338 | 9.10e-109 | 324 |
| Msa0464160 | MtrunA17_Chr7g0255581 | 45.482 | 332 | 178 | 2 | 3 | 332 | 8 | 338 | 9.10e-109 | 324 |
| Msa0464160 | MtrunA17_Chr3g0114691 | 40.052 | 387 | 221 | 3 | 2 | 387 | 13 | 389 | 5.45e-108 | 322 |
| Msa0464160 | MtrunA17_Chr1g0182291 | 43.343 | 353 | 190 | 3 | 4 | 356 | 10 | 352 | 2.37e-106 | 317 |
| Msa0464160 | MtrunA17_Chr7g0263101 | 41.823 | 373 | 204 | 3 | 6 | 378 | 10 | 369 | 4.61e-105 | 314 |
| Msa0464160 | MtrunA17_Chr8g0354121 | 41.667 | 384 | 194 | 6 | 5 | 378 | 9 | 372 | 9.61e-100 | 301 |
| Msa0464160 | MtrunA17_Chr3g0081421 | 45.152 | 330 | 177 | 4 | 4 | 330 | 12 | 340 | 1.24e-99 | 301 |
| Msa0464160 | MtrunA17_Chr3g0081511 | 44.713 | 331 | 178 | 4 | 2 | 330 | 10 | 337 | 1.24e-96 | 293 |
| Msa0464160 | MtrunA17_Chr1g0186641 | 39.877 | 326 | 192 | 2 | 5 | 330 | 9 | 330 | 1.42e-80 | 251 |
| Msa0464160 | MtrunA17_Chr1g0186601 | 38.957 | 326 | 195 | 2 | 5 | 330 | 12 | 333 | 1.26e-78 | 246 |
| Msa0464160 | MtrunA17_Chr1g0186571 | 39.264 | 326 | 194 | 2 | 5 | 330 | 9 | 330 | 2.30e-77 | 243 |
| Msa0464160 | MtrunA17_Chr1g0186561 | 39.077 | 325 | 195 | 1 | 6 | 330 | 13 | 334 | 3.27e-76 | 239 |
| Msa0464160 | MtrunA17_Chr1g0186611 | 37.231 | 325 | 200 | 1 | 6 | 330 | 13 | 333 | 3.10e-75 | 237 |
| Msa0464160 | MtrunA17_Chr1g0171301 | 37.538 | 325 | 201 | 1 | 6 | 330 | 13 | 335 | 1.20e-74 | 236 |
| Msa0464160 | MtrunA17_Chr1g0155761 | 35.544 | 377 | 225 | 3 | 11 | 370 | 23 | 398 | 1.26e-71 | 229 |
| Msa0464160 | MtrunA17_Chr3g0142131 | 35.028 | 354 | 217 | 4 | 14 | 355 | 25 | 377 | 1.50e-69 | 224 |
| Msa0464160 | MtrunA17_Chr3g0129601 | 35.976 | 328 | 206 | 3 | 5 | 330 | 25 | 350 | 1.27e-68 | 220 |
| Msa0464160 | MtrunA17_Chr1g0184221 | 34.615 | 364 | 208 | 6 | 9 | 354 | 16 | 367 | 4.96e-68 | 219 |
| Msa0464160 | MtrunA17_Chr6g0463971 | 35.393 | 356 | 209 | 6 | 5 | 355 | 12 | 351 | 2.47e-66 | 214 |
| Msa0464160 | MtrunA17_Chr6g0483401 | 37.278 | 338 | 200 | 5 | 18 | 348 | 19 | 351 | 4.99e-65 | 211 |
| Msa0464160 | MtrunA17_Chr3g0129571 | 36.000 | 325 | 203 | 3 | 10 | 330 | 8 | 331 | 5.02e-65 | 211 |
| Msa0464160 | MtrunA17_Chr4g0050881 | 36.467 | 351 | 214 | 5 | 1 | 348 | 1 | 345 | 8.44e-64 | 207 |
| Msa0464160 | MtrunA17_Chr2g0278561 | 34.946 | 372 | 236 | 3 | 9 | 379 | 15 | 381 | 9.65e-64 | 209 |
| Msa0464160 | MtrunA17_Chr2g0284261 | 33.983 | 359 | 229 | 4 | 9 | 366 | 8 | 359 | 3.99e-61 | 201 |
| Msa0464160 | MtrunA17_Chr1g0164831 | 33.141 | 347 | 217 | 6 | 9 | 350 | 3 | 339 | 1.45e-60 | 199 |
| Msa0464160 | MtrunA17_Chr8g0383731 | 32.857 | 350 | 226 | 4 | 5 | 348 | 1 | 347 | 2.31e-60 | 198 |
| Msa0464160 | MtrunA17_Chr7g0271561 | 32.515 | 326 | 214 | 3 | 10 | 330 | 8 | 332 | 2.09e-59 | 197 |
| Msa0464160 | MtrunA17_Chr3g0129591 | 33.427 | 356 | 226 | 5 | 10 | 361 | 6 | 354 | 7.35e-59 | 195 |
| Msa0464160 | MtrunA17_Chr2g0278541 | 32.267 | 375 | 239 | 6 | 2 | 367 | 3 | 371 | 1.23e-58 | 195 |
| Msa0464160 | MtrunA17_Chr2g0278551 | 32.000 | 375 | 245 | 3 | 9 | 380 | 12 | 379 | 5.74e-58 | 194 |
| Msa0464160 | MtrunA17_Chr2g0290611 | 33.711 | 353 | 226 | 3 | 5 | 352 | 8 | 357 | 2.87e-57 | 191 |
| Msa0464160 | MtrunA17_Chr8g0334761 | 32.249 | 369 | 235 | 6 | 10 | 377 | 11 | 365 | 5.81e-57 | 190 |
| Msa0464160 | MtrunA17_Chr4g0051021 | 31.183 | 372 | 248 | 5 | 5 | 372 | 10 | 377 | 5.44e-55 | 185 |
| Msa0464160 | MtrunA17_Chr2g0332001 | 29.730 | 370 | 245 | 4 | 9 | 372 | 38 | 398 | 6.61e-55 | 186 |
| Msa0464160 | MtrunA17_Chr3g0126101 | 31.405 | 363 | 229 | 6 | 6 | 368 | 3 | 345 | 1.15e-54 | 184 |
| Msa0464160 | MtrunA17_Chr1g0172881 | 62.044 | 137 | 42 | 1 | 122 | 258 | 23 | 149 | 1.73e-54 | 177 |
| Msa0464160 | MtrunA17_Chr2g0310441 | 34.568 | 324 | 204 | 5 | 10 | 330 | 11 | 329 | 3.05e-53 | 181 |
| Msa0464160 | MtrunA17_Chr4g0059311 | 30.286 | 350 | 239 | 4 | 4 | 351 | 6 | 352 | 5.09e-52 | 177 |
| Msa0464160 | MtrunA17_Chr4g0050891 | 32.716 | 324 | 214 | 3 | 5 | 325 | 9 | 331 | 1.24e-51 | 176 |
| Msa0464160 | MtrunA17_Chr3g0129581 | 32.493 | 357 | 232 | 5 | 10 | 361 | 6 | 358 | 5.23e-51 | 174 |
| Msa0464160 | MtrunA17_Chr4g0050941 | 34.218 | 339 | 216 | 4 | 5 | 337 | 8 | 345 | 9.93e-51 | 174 |
| Msa0464160 | MtrunA17_Chr5g0413951 | 31.447 | 318 | 213 | 4 | 14 | 330 | 12 | 325 | 1.36e-49 | 171 |
| Msa0464160 | MtrunA17_Chr5g0413941 | 30.247 | 324 | 221 | 4 | 14 | 336 | 12 | 331 | 2.73e-49 | 169 |
| Msa0464160 | MtrunA17_Chr8g0334751 | 33.811 | 349 | 225 | 4 | 10 | 357 | 12 | 355 | 1.20e-48 | 168 |
| Msa0464160 | MtrunA17_Chr8g0334771 | 33.851 | 322 | 209 | 3 | 10 | 330 | 11 | 329 | 1.48e-48 | 168 |
| Msa0464160 | MtrunA17_Chr1g0160111 | 27.635 | 351 | 239 | 6 | 18 | 356 | 16 | 363 | 2.06e-48 | 168 |
| Msa0464160 | MtrunA17_Chr5g0407971 | 30.110 | 362 | 235 | 6 | 9 | 356 | 11 | 368 | 4.54e-48 | 167 |
| Msa0464160 | MtrunA17_Chr5g0413961 | 31.073 | 354 | 218 | 8 | 10 | 358 | 15 | 347 | 1.64e-47 | 165 |
| Msa0464160 | MtrunA17_Chr5g0408001 | 29.016 | 386 | 247 | 8 | 3 | 367 | 8 | 387 | 1.42e-46 | 163 |
| Msa0464160 | MtrunA17_Chr5g0408031 | 29.474 | 380 | 233 | 7 | 6 | 366 | 7 | 370 | 3.31e-46 | 162 |
| Msa0464160 | MtrunA17_Chr4g0073241 | 27.855 | 359 | 248 | 6 | 10 | 364 | 9 | 360 | 1.55e-45 | 160 |
| Msa0464160 | MtrunA17_Chr5g0408041 | 29.444 | 360 | 237 | 4 | 9 | 353 | 11 | 368 | 3.89e-45 | 160 |
| Msa0464160 | MtrunA17_Chr5g0413921 | 30.091 | 329 | 225 | 4 | 14 | 341 | 12 | 336 | 7.07e-45 | 158 |
| Msa0464160 | MtrunA17_Chr5g0407991 | 28.947 | 380 | 244 | 7 | 9 | 369 | 9 | 381 | 1.65e-43 | 155 |
| Msa0464160 | MtrunA17_Chr7g0227921 | 29.738 | 343 | 222 | 6 | 31 | 372 | 33 | 357 | 3.24e-43 | 154 |
| Msa0464160 | MtrunA17_Chr5g0428881 | 27.467 | 375 | 267 | 4 | 1 | 372 | 10 | 382 | 1.28e-42 | 153 |
| Msa0464160 | MtrunA17_Chr5g0413931 | 30.357 | 336 | 223 | 8 | 13 | 344 | 10 | 338 | 2.07e-42 | 151 |
| Msa0464160 | MtrunA17_Chr8g0369841 | 28.125 | 352 | 235 | 6 | 17 | 353 | 17 | 365 | 4.80e-42 | 151 |
| Msa0464160 | MtrunA17_Chr1g0150151 | 27.829 | 327 | 232 | 3 | 6 | 330 | 8 | 332 | 4.49e-41 | 148 |
| Msa0464160 | MtrunA17_Chr4g0050931 | 28.367 | 349 | 205 | 6 | 5 | 348 | 8 | 316 | 8.32e-40 | 144 |
| Msa0464160 | MtrunA17_Chr5g0404811 | 31.169 | 231 | 156 | 2 | 122 | 352 | 6 | 233 | 9.62e-36 | 131 |
| Msa0464160 | MtrunA17_Chr1g0172891 | 60.360 | 111 | 33 | 2 | 265 | 375 | 13 | 112 | 3.33e-35 | 125 |
| Msa0464160 | MtrunA17_Chr4g0051001 | 28.617 | 311 | 208 | 3 | 5 | 308 | 27 | 330 | 4.37e-35 | 131 |
| Msa0464160 | MtrunA17_Chr6g0451171 | 28.655 | 342 | 231 | 7 | 10 | 348 | 13 | 344 | 9.69e-35 | 131 |
| Msa0464160 | MtrunA17_Chr6g0451201 | 30.818 | 318 | 211 | 6 | 31 | 348 | 34 | 342 | 2.62e-34 | 130 |
| Msa0464160 | MtrunA17_Chr3g0126091 | 26.301 | 346 | 244 | 5 | 10 | 352 | 12 | 349 | 2.82e-34 | 130 |
| Msa0464160 | MtrunA17_Chr1g0177231 | 57.391 | 115 | 35 | 3 | 251 | 362 | 18 | 121 | 7.87e-34 | 122 |
| Msa0464160 | MtrunA17_Chr5g0441761 | 26.923 | 338 | 215 | 5 | 23 | 360 | 40 | 345 | 1.10e-33 | 128 |
| Msa0464160 | MtrunA17_Chr2g0278021 | 38.251 | 183 | 104 | 4 | 164 | 346 | 54 | 227 | 1.35e-32 | 124 |
| Msa0464160 | MtrunA17_Chr1g0182261 | 43.165 | 139 | 77 | 2 | 198 | 334 | 76 | 214 | 1.01e-31 | 120 |
| Msa0464160 | MtrunA17_Chr6g0451211 | 25.731 | 342 | 244 | 7 | 10 | 348 | 13 | 347 | 3.11e-30 | 119 |
| Msa0464160 | MtrunA17_Chr6g0451251 | 30.312 | 320 | 214 | 5 | 31 | 348 | 34 | 346 | 3.49e-30 | 119 |
| Msa0464160 | MtrunA17_Chr5g0429001 | 26.269 | 335 | 195 | 6 | 61 | 367 | 3 | 313 | 1.06e-29 | 117 |
| Msa0464160 | MtrunA17_Chr3g0084091 | 27.698 | 278 | 195 | 4 | 94 | 368 | 15 | 289 | 1.37e-29 | 116 |
| Msa0464160 | MtrunA17_Chr1g0211801 | 29.880 | 251 | 170 | 4 | 9 | 258 | 11 | 256 | 2.78e-29 | 114 |
| Msa0464160 | MtrunA17_Chr6g0451261 | 26.059 | 307 | 222 | 4 | 6 | 311 | 8 | 310 | 1.52e-28 | 117 |
| Msa0464160 | MtrunA17_Chr6g0451191 | 29.675 | 246 | 164 | 5 | 123 | 368 | 1 | 237 | 1.80e-28 | 111 |
| Msa0464160 | MtrunA17_Chr4g0056081 | 29.052 | 327 | 214 | 8 | 14 | 330 | 19 | 337 | 5.45e-27 | 110 |
| Msa0464160 | MtrunA17_Chr5g0399281 | 28.875 | 329 | 209 | 8 | 14 | 330 | 13 | 328 | 1.18e-24 | 103 |
| Msa0464160 | MtrunA17_Chr8g0334711 | 34.694 | 196 | 124 | 3 | 10 | 204 | 11 | 203 | 8.50e-24 | 98.2 |
| Msa0464160 | MtrunA17_Chr8g0334721 | 40.476 | 126 | 74 | 1 | 221 | 346 | 1 | 125 | 3.80e-22 | 92.0 |
| Msa0464160 | MtrunA17_Chr5g0404801 | 41.880 | 117 | 68 | 0 | 6 | 122 | 4 | 120 | 1.09e-19 | 84.3 |
| Msa0464160 | MtrunA17_Chr4g0050921 | 33.010 | 103 | 68 | 1 | 209 | 311 | 3 | 104 | 7.87e-13 | 65.1 |
| Msa0464160 | MtrunA17_Chr2g0278031 | 36.752 | 117 | 74 | 0 | 5 | 121 | 10 | 126 | 9.69e-13 | 64.7 |
| Msa0464160 | MtrunA17_Chr4g0021721 | 53.333 | 45 | 21 | 0 | 238 | 282 | 2 | 46 | 2.29e-12 | 61.6 |
| Msa0464160 | MtrunA17_Chr8g0372571 | 53.333 | 45 | 21 | 0 | 238 | 282 | 2 | 46 | 2.38e-12 | 62.0 |
| Msa0464160 | MtrunA17_Chr1g0211811 | 41.333 | 75 | 44 | 0 | 260 | 334 | 1 | 75 | 2.61e-12 | 62.4 |
| Msa0464160 | MtrunA17_Chr8g0334731 | 30.000 | 150 | 100 | 3 | 58 | 204 | 40 | 187 | 1.74e-11 | 63.2 |
| Msa0464160 | MtrunA17_Chr6g0451241 | 37.333 | 75 | 46 | 1 | 274 | 348 | 23 | 96 | 6.72e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464160 | AT4G08290.1 | 48.056 | 360 | 177 | 3 | 9 | 368 | 12 | 361 | 9.54e-122 | 357 |
| Msa0464160 | AT2G37460.1 | 40.374 | 374 | 209 | 2 | 5 | 378 | 10 | 369 | 6.36e-105 | 314 |
| Msa0464160 | AT2G39510.1 | 43.651 | 378 | 191 | 5 | 5 | 375 | 3 | 365 | 1.24e-104 | 313 |
| Msa0464160 | AT1G21890.1 | 44.767 | 344 | 181 | 3 | 1 | 336 | 1 | 343 | 3.43e-101 | 305 |
| Msa0464160 | AT1G44800.1 | 41.129 | 372 | 204 | 5 | 2 | 371 | 3 | 361 | 3.03e-100 | 302 |
| Msa0464160 | AT4G08300.1 | 39.566 | 369 | 219 | 3 | 2 | 367 | 3 | 370 | 1.78e-94 | 288 |
| Msa0464160 | AT5G07050.1 | 41.317 | 334 | 189 | 3 | 3 | 330 | 11 | 343 | 1.07e-93 | 286 |
| Msa0464160 | AT2G40900.1 | 41.441 | 333 | 187 | 3 | 6 | 338 | 7 | 331 | 5.65e-93 | 284 |
| Msa0464160 | AT1G21890.2 | 44.937 | 316 | 165 | 3 | 1 | 308 | 1 | 315 | 2.04e-89 | 274 |
| Msa0464160 | AT4G08290.2 | 49.398 | 249 | 125 | 1 | 9 | 257 | 12 | 259 | 3.41e-86 | 263 |
| Msa0464160 | AT3G56620.1 | 40.867 | 323 | 182 | 3 | 6 | 327 | 7 | 321 | 1.44e-84 | 262 |
| Msa0464160 | AT2G37450.2 | 41.061 | 358 | 175 | 5 | 3 | 355 | 2 | 328 | 1.16e-83 | 258 |
| Msa0464160 | AT5G13670.1 | 36.612 | 366 | 213 | 5 | 6 | 364 | 4 | 357 | 4.02e-78 | 246 |
| Msa0464160 | AT1G75500.1 | 38.298 | 329 | 193 | 5 | 11 | 332 | 21 | 346 | 2.43e-71 | 228 |
| Msa0464160 | AT1G75500.2 | 38.298 | 329 | 193 | 5 | 11 | 332 | 21 | 346 | 2.43e-71 | 228 |
| Msa0464160 | AT3G18200.2 | 34.091 | 352 | 224 | 4 | 6 | 355 | 31 | 376 | 2.92e-66 | 215 |
| Msa0464160 | AT2G37450.3 | 43.233 | 266 | 136 | 3 | 95 | 355 | 1 | 256 | 4.55e-65 | 208 |
| Msa0464160 | AT3G53210.1 | 34.986 | 363 | 226 | 6 | 6 | 361 | 6 | 365 | 8.71e-65 | 211 |
| Msa0464160 | AT5G64700.1 | 32.540 | 378 | 226 | 7 | 5 | 375 | 3 | 358 | 2.84e-61 | 201 |
| Msa0464160 | AT4G30420.2 | 31.989 | 372 | 237 | 4 | 5 | 373 | 4 | 362 | 2.54e-57 | 192 |
| Msa0464160 | AT4G30420.1 | 32.500 | 360 | 227 | 4 | 17 | 373 | 6 | 352 | 6.26e-56 | 188 |
| Msa0464160 | AT2G37450.1 | 44.298 | 228 | 117 | 2 | 122 | 349 | 61 | 278 | 2.82e-55 | 184 |
| Msa0464160 | AT2G37450.1 | 46.667 | 60 | 32 | 0 | 3 | 62 | 2 | 61 | 5.27e-11 | 63.5 |
| Msa0464160 | AT1G09380.1 | 28.726 | 369 | 244 | 4 | 10 | 366 | 8 | 369 | 9.34e-53 | 180 |
| Msa0464160 | AT1G68170.2 | 30.084 | 359 | 247 | 3 | 6 | 361 | 9 | 366 | 7.37e-52 | 177 |
| Msa0464160 | AT1G68170.1 | 30.484 | 351 | 240 | 3 | 14 | 361 | 7 | 356 | 1.52e-51 | 176 |
| Msa0464160 | AT3G30340.1 | 31.594 | 345 | 220 | 5 | 9 | 350 | 10 | 341 | 3.65e-51 | 175 |
| Msa0464160 | AT3G53210.2 | 34.713 | 314 | 189 | 8 | 56 | 361 | 3 | 308 | 1.98e-50 | 172 |
| Msa0464160 | AT4G28040.1 | 30.659 | 349 | 220 | 5 | 9 | 355 | 7 | 335 | 6.13e-50 | 172 |
| Msa0464160 | AT4G28040.5 | 30.659 | 349 | 220 | 5 | 9 | 355 | 7 | 335 | 6.13e-50 | 172 |
| Msa0464160 | AT4G28040.3 | 30.659 | 349 | 220 | 5 | 9 | 355 | 7 | 335 | 6.13e-50 | 172 |
| Msa0464160 | AT4G28040.4 | 30.659 | 349 | 220 | 5 | 9 | 355 | 7 | 335 | 6.13e-50 | 172 |
| Msa0464160 | AT4G28040.2 | 30.659 | 349 | 220 | 5 | 9 | 355 | 7 | 335 | 6.13e-50 | 172 |
| Msa0464160 | AT4G01440.1 | 31.511 | 311 | 210 | 2 | 30 | 340 | 30 | 337 | 1.63e-48 | 168 |
| Msa0464160 | AT1G01070.1 | 32.941 | 340 | 209 | 8 | 31 | 367 | 37 | 360 | 3.79e-48 | 167 |
| Msa0464160 | AT1G11450.3 | 31.804 | 327 | 214 | 4 | 10 | 333 | 16 | 336 | 6.06e-48 | 166 |
| Msa0464160 | AT1G11450.5 | 33.788 | 293 | 185 | 4 | 44 | 333 | 6 | 292 | 1.51e-45 | 159 |
| Msa0464160 | AT3G18200.1 | 34.400 | 250 | 156 | 4 | 108 | 355 | 3 | 246 | 2.75e-45 | 157 |
| Msa0464160 | AT1G25270.1 | 31.148 | 366 | 223 | 8 | 9 | 357 | 2 | 355 | 1.04e-44 | 158 |
| Msa0464160 | AT3G28050.1 | 32.317 | 328 | 202 | 7 | 10 | 330 | 12 | 326 | 2.15e-44 | 157 |
| Msa0464160 | AT5G45370.2 | 31.307 | 329 | 211 | 5 | 17 | 332 | 27 | 353 | 2.83e-44 | 157 |
| Msa0464160 | AT5G45370.4 | 31.307 | 329 | 211 | 5 | 17 | 332 | 27 | 353 | 2.83e-44 | 157 |
| Msa0464160 | AT5G45370.1 | 31.013 | 316 | 205 | 3 | 17 | 332 | 27 | 329 | 3.84e-44 | 157 |
| Msa0464160 | AT1G11450.2 | 33.448 | 290 | 184 | 4 | 47 | 333 | 2 | 285 | 4.39e-44 | 155 |
| Msa0464160 | AT1G11460.1 | 31.098 | 328 | 216 | 5 | 10 | 333 | 16 | 337 | 3.38e-43 | 154 |
| Msa0464160 | AT4G01430.1 | 29.132 | 357 | 239 | 6 | 12 | 358 | 13 | 365 | 1.09e-42 | 153 |
| Msa0464160 | AT3G28130.2 | 29.155 | 343 | 234 | 4 | 14 | 352 | 17 | 354 | 1.81e-42 | 152 |
| Msa0464160 | AT1G43650.1 | 30.395 | 329 | 221 | 3 | 9 | 336 | 6 | 327 | 2.03e-42 | 152 |
| Msa0464160 | AT3G45870.1 | 28.255 | 361 | 246 | 6 | 9 | 358 | 11 | 369 | 3.66e-41 | 149 |
| Msa0464160 | AT4G01440.3 | 31.183 | 279 | 189 | 2 | 30 | 308 | 30 | 305 | 8.25e-41 | 147 |
| Msa0464160 | AT3G53210.3 | 34.387 | 253 | 162 | 4 | 6 | 257 | 6 | 255 | 2.23e-40 | 144 |
| Msa0464160 | AT5G40230.1 | 29.670 | 364 | 230 | 7 | 6 | 356 | 17 | 367 | 2.83e-40 | 147 |
| Msa0464160 | AT3G28130.5 | 30.534 | 262 | 181 | 1 | 91 | 352 | 8 | 268 | 3.11e-40 | 144 |
| Msa0464160 | AT3G28130.1 | 30.534 | 262 | 181 | 1 | 91 | 352 | 8 | 268 | 3.11e-40 | 144 |
| Msa0464160 | AT4G19185.1 | 30.539 | 334 | 207 | 6 | 17 | 332 | 28 | 354 | 1.25e-39 | 145 |
| Msa0464160 | AT5G40240.2 | 30.321 | 343 | 229 | 5 | 6 | 343 | 30 | 367 | 1.49e-39 | 145 |
| Msa0464160 | AT5G40240.1 | 30.321 | 343 | 229 | 5 | 6 | 343 | 16 | 353 | 1.70e-39 | 144 |
| Msa0464160 | AT5G40240.3 | 30.321 | 343 | 229 | 5 | 6 | 343 | 16 | 353 | 1.70e-39 | 144 |
| Msa0464160 | AT3G28100.1 | 29.429 | 333 | 226 | 4 | 4 | 332 | 8 | 335 | 2.02e-39 | 144 |
| Msa0464160 | AT1G01070.2 | 31.429 | 315 | 197 | 8 | 56 | 367 | 15 | 313 | 2.52e-39 | 143 |
| Msa0464160 | AT1G70260.1 | 26.703 | 367 | 253 | 6 | 10 | 365 | 12 | 373 | 1.58e-38 | 142 |
| Msa0464160 | AT5G40210.1 | 28.406 | 345 | 222 | 8 | 14 | 355 | 17 | 339 | 2.90e-38 | 140 |
| Msa0464160 | AT5G64700.2 | 32.558 | 258 | 168 | 4 | 5 | 257 | 3 | 259 | 9.91e-38 | 137 |
| Msa0464160 | AT1G11450.4 | 30.464 | 302 | 201 | 4 | 10 | 308 | 16 | 311 | 2.89e-37 | 137 |
| Msa0464160 | AT3G28080.1 | 29.254 | 335 | 228 | 4 | 4 | 334 | 8 | 337 | 6.07e-37 | 137 |
| Msa0464160 | AT5G47470.3 | 31.250 | 320 | 208 | 5 | 14 | 330 | 62 | 372 | 5.07e-36 | 135 |
| Msa0464160 | AT5G47470.2 | 31.250 | 320 | 208 | 5 | 14 | 330 | 62 | 372 | 5.39e-36 | 135 |
| Msa0464160 | AT5G47470.1 | 31.250 | 320 | 208 | 5 | 14 | 330 | 34 | 344 | 6.17e-36 | 135 |
| Msa0464160 | AT1G11450.1 | 33.333 | 249 | 157 | 4 | 88 | 333 | 2 | 244 | 6.77e-36 | 132 |
| Msa0464160 | AT3G28080.5 | 30.579 | 242 | 167 | 1 | 93 | 334 | 8 | 248 | 3.00e-35 | 130 |
| Msa0464160 | AT3G28080.7 | 30.579 | 242 | 167 | 1 | 93 | 334 | 8 | 248 | 3.00e-35 | 130 |
| Msa0464160 | AT3G28080.8 | 30.579 | 242 | 167 | 1 | 93 | 334 | 8 | 248 | 3.00e-35 | 130 |
| Msa0464160 | AT3G28080.6 | 30.579 | 242 | 167 | 1 | 93 | 334 | 8 | 248 | 3.00e-35 | 130 |
| Msa0464160 | AT3G45870.8 | 27.832 | 309 | 212 | 5 | 9 | 308 | 11 | 317 | 1.35e-34 | 130 |
| Msa0464160 | AT3G28080.2 | 30.112 | 269 | 180 | 3 | 69 | 334 | 66 | 329 | 2.32e-34 | 130 |
| Msa0464160 | AT3G28070.1 | 28.358 | 335 | 231 | 4 | 4 | 334 | 11 | 340 | 3.51e-34 | 130 |
| Msa0464160 | AT4G01450.2 | 32.166 | 314 | 204 | 3 | 30 | 342 | 30 | 335 | 6.09e-34 | 129 |
| Msa0464160 | AT3G28070.2 | 30.165 | 242 | 168 | 1 | 93 | 334 | 8 | 248 | 1.33e-33 | 126 |
| Msa0464160 | AT3G28130.3 | 30.870 | 230 | 158 | 1 | 123 | 352 | 1 | 229 | 1.80e-32 | 122 |
| Msa0464160 | AT4G01430.2 | 29.000 | 300 | 206 | 4 | 12 | 308 | 13 | 308 | 1.86e-32 | 124 |
| Msa0464160 | AT3G30340.2 | 30.566 | 265 | 174 | 5 | 9 | 270 | 10 | 267 | 6.25e-32 | 122 |
| Msa0464160 | AT4G01450.1 | 31.429 | 280 | 183 | 3 | 30 | 308 | 30 | 301 | 1.03e-31 | 123 |
| Msa0464160 | AT4G01440.5 | 29.870 | 231 | 159 | 2 | 110 | 340 | 2 | 229 | 1.88e-31 | 120 |
| Msa0464160 | AT4G01440.2 | 29.870 | 231 | 159 | 2 | 110 | 340 | 2 | 229 | 1.88e-31 | 120 |
| Msa0464160 | AT4G15540.1 | 28.000 | 350 | 229 | 6 | 6 | 347 | 13 | 347 | 2.85e-31 | 122 |
| Msa0464160 | AT4G15540.2 | 28.000 | 350 | 229 | 6 | 6 | 347 | 13 | 347 | 2.85e-31 | 122 |
| Msa0464160 | AT4G01440.4 | 31.250 | 224 | 151 | 2 | 35 | 258 | 35 | 255 | 3.06e-31 | 120 |
| Msa0464160 | AT4G19185.2 | 30.357 | 280 | 169 | 7 | 87 | 347 | 20 | 292 | 1.27e-30 | 119 |
| Msa0464160 | AT5G45370.6 | 30.651 | 261 | 163 | 6 | 93 | 337 | 1 | 259 | 1.04e-29 | 116 |
| Msa0464160 | AT5G45370.5 | 30.651 | 261 | 163 | 6 | 93 | 337 | 1 | 259 | 1.04e-29 | 116 |
| Msa0464160 | AT1G60050.1 | 24.599 | 374 | 255 | 7 | 10 | 368 | 13 | 374 | 2.41e-29 | 117 |
| Msa0464160 | AT4G01450.4 | 32.701 | 211 | 134 | 2 | 30 | 239 | 30 | 233 | 2.47e-29 | 114 |
| Msa0464160 | AT3G28080.9 | 30.189 | 212 | 147 | 1 | 123 | 334 | 1 | 211 | 7.62e-28 | 110 |
| Msa0464160 | AT4G01450.3 | 34.043 | 188 | 116 | 2 | 30 | 216 | 30 | 210 | 6.06e-27 | 107 |
| Msa0464160 | AT3G45870.9 | 27.925 | 265 | 176 | 6 | 3 | 258 | 9 | 267 | 1.28e-26 | 107 |
| Msa0464160 | AT4G16620.1 | 28.904 | 301 | 202 | 5 | 35 | 330 | 37 | 330 | 1.47e-26 | 109 |
| Msa0464160 | AT3G28070.5 | 29.717 | 212 | 148 | 1 | 123 | 334 | 1 | 211 | 6.35e-26 | 104 |
| Msa0464160 | AT4G24980.1 | 26.059 | 307 | 158 | 4 | 24 | 330 | 1 | 238 | 2.19e-25 | 104 |
| Msa0464160 | AT3G28070.3 | 26.861 | 309 | 217 | 4 | 4 | 308 | 11 | 314 | 1.69e-24 | 102 |
| Msa0464160 | AT3G45870.5 | 28.346 | 254 | 169 | 6 | 116 | 358 | 43 | 294 | 3.01e-24 | 102 |
| Msa0464160 | AT3G28130.4 | 28.807 | 243 | 165 | 3 | 14 | 252 | 17 | 255 | 1.11e-23 | 99.4 |
| Msa0464160 | AT5G45370.3 | 30.180 | 222 | 140 | 5 | 124 | 332 | 74 | 293 | 1.05e-22 | 97.8 |
| Msa0464160 | AT3G28100.3 | 28.458 | 253 | 173 | 3 | 4 | 252 | 8 | 256 | 3.82e-22 | 95.1 |
| Msa0464160 | AT3G28080.3 | 26.269 | 335 | 184 | 6 | 4 | 334 | 8 | 283 | 5.26e-22 | 95.5 |
| Msa0464160 | AT1G43650.2 | 29.752 | 242 | 162 | 3 | 17 | 257 | 14 | 248 | 2.53e-21 | 92.8 |
| Msa0464160 | AT4G01430.3 | 27.391 | 230 | 156 | 4 | 138 | 358 | 1 | 228 | 5.71e-21 | 91.3 |
| Msa0464160 | AT3G28080.4 | 26.446 | 242 | 123 | 3 | 93 | 334 | 8 | 194 | 3.52e-20 | 88.6 |
| Msa0464160 | AT4G16620.4 | 29.583 | 240 | 158 | 4 | 95 | 330 | 1 | 233 | 5.18e-20 | 89.4 |
| Msa0464160 | AT4G16620.2 | 29.583 | 240 | 158 | 4 | 95 | 330 | 1 | 233 | 5.18e-20 | 89.4 |
| Msa0464160 | AT3G45870.2 | 33.333 | 144 | 94 | 2 | 182 | 325 | 42 | 183 | 2.77e-19 | 86.7 |
| Msa0464160 | AT3G45870.6 | 27.723 | 202 | 135 | 5 | 116 | 308 | 43 | 242 | 4.84e-18 | 83.6 |
| Msa0464160 | AT3G45870.7 | 27.723 | 202 | 135 | 5 | 116 | 308 | 43 | 242 | 4.84e-18 | 83.6 |
| Msa0464160 | AT3G28100.2 | 29.148 | 223 | 150 | 3 | 4 | 222 | 8 | 226 | 6.60e-17 | 80.1 |
| Msa0464160 | AT4G16620.3 | 30.964 | 197 | 130 | 5 | 40 | 234 | 41 | 233 | 3.90e-16 | 78.2 |
| Msa0464160 | AT3G28130.6 | 29.744 | 195 | 129 | 3 | 14 | 204 | 17 | 207 | 4.48e-15 | 74.3 |
Find 113 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCGTTACTTTCATTTCT+AGG | 0.166009 | 3_3:-63794235 | None:intergenic |
| TCTAAATTTGTGAAAGTAAA+TGG | 0.183752 | 3_3:+63794548 | Msa0464160:three_prime_UTR |
| AGCCAAGACACATTTAATTT+TGG | 0.208857 | 3_3:-63794309 | None:intergenic |
| TGTCATTATCTCTTTGAAAA+TGG | 0.218801 | 3_3:-63794360 | None:intergenic |
| ATTTCGAGCTTTGTATTCTT+TGG | 0.224631 | 3_3:-63794137 | None:intergenic |
| CTATTGTTGGCTGTTCAATT+TGG | 0.229434 | 3_3:+63792314 | Msa0464160:CDS |
| TAGAATCTCAAACCACAAAA+TGG | 0.244858 | 3_3:-63794529 | None:intergenic |
| GCAACTTGGGTCTGTTTCAT+TGG | 0.245357 | 3_3:+63793555 | Msa0464160:CDS |
| AACTCTCATGCTTGGGCTCT+TGG | 0.264844 | 3_3:+63793621 | Msa0464160:CDS |
| ACCGGTGACCGGTGGATCAT+AGG | 0.285377 | 3_3:+63793323 | Msa0464160:CDS |
| TTGTTGGGAGTATTCATTAA+AGG | 0.292892 | 3_3:+63794476 | Msa0464160:three_prime_UTR |
| GGAGCAATAGTGGTGGTTCT+TGG | 0.303174 | 3_3:+63794088 | Msa0464160:CDS |
| TGTTACTAGAAAGAGGAATT+TGG | 0.305169 | 3_3:+63794409 | Msa0464160:three_prime_UTR |
| TGATCAATGCTTTGCCCTGC+TGG | 0.312662 | 3_3:+63792809 | Msa0464160:CDS |
| GAAAGAGGAATTTGGCCATT+TGG | 0.314426 | 3_3:+63794417 | Msa0464160:three_prime_UTR |
| ATCGGCACCATTGTAACATT+TGG | 0.331344 | 3_3:+63793200 | Msa0464160:CDS |
| CTAATTGCTCATTTAATTAG+TGG | 0.336095 | 3_3:+63794449 | Msa0464160:three_prime_UTR |
| CACCGATGTCTCTCGCAACT+TGG | 0.358711 | 3_3:+63793541 | Msa0464160:CDS |
| CTCATGCTTGGGCTCTTGGT+TGG | 0.362607 | 3_3:+63793625 | Msa0464160:CDS |
| GAGCAATAGTGGTGGTTCTT+GGG | 0.363548 | 3_3:+63794089 | Msa0464160:CDS |
| GCTGTTCAATTTGGTTCTGC+TGG | 0.366885 | 3_3:+63792323 | Msa0464160:CDS |
| TTAAAAGCAGTCACAATAAC+TGG | 0.368606 | 3_3:-63793897 | None:intergenic |
| TTGATTAAATAATATTGTTA+AGG | 0.369440 | 3_3:+63794686 | Msa0464160:three_prime_UTR |
| TCATGCTTGGGCTCTTGGTT+GGG | 0.371511 | 3_3:+63793626 | Msa0464160:CDS |
| CGATATTAATGAAGCTCAAT+TGG | 0.371801 | 3_3:+63794252 | Msa0464160:CDS |
| TTTAATTAGTGGTCACTTGT+TGG | 0.384355 | 3_3:+63794460 | Msa0464160:three_prime_UTR |
| ACTGGAACACATGAAGATTA+AGG | 0.386490 | 3_3:+63793154 | Msa0464160:CDS |
| AGCGCCACAACTCTCATGCT+TGG | 0.393575 | 3_3:+63793613 | Msa0464160:CDS |
| GGGACATGTTTCCTCCTCAT+TGG | 0.394546 | 3_3:+63793344 | Msa0464160:CDS |
| ACAGCCAACAATAGTAGATA+TGG | 0.410774 | 3_3:-63792305 | None:intergenic |
| GATCAATGCTTTGCCCTGCT+GGG | 0.418619 | 3_3:+63792810 | Msa0464160:CDS |
| TTAATTAGTGGTCACTTGTT+GGG | 0.419073 | 3_3:+63794461 | Msa0464160:three_prime_UTR |
| GAAACACTAACCGCGTAAGC+TGG | 0.419739 | 3_3:-63793666 | None:intergenic |
| TATGATCATCGTAACGGCCT+TGG | 0.421783 | 3_3:+63793929 | Msa0464160:CDS |
| ATTTGGAGGAACATTGCTAA+TGG | 0.425413 | 3_3:+63793217 | Msa0464160:CDS |
| TTCCTCCTCATTGGTTGCGC+TGG | 0.426081 | 3_3:+63793353 | Msa0464160:CDS |
| GGTAAACAATGAAGACATAA+TGG | 0.433475 | 3_3:-63792388 | None:intergenic |
| TGCAATGAGTCCTCCTTTGT+AGG | 0.437328 | 3_3:-63794181 | None:intergenic |
| TGGGCTTTATCTAGTTGTGT+GGG | 0.443143 | 3_3:+63794108 | Msa0464160:CDS |
| TAAAAGAGAGACTCAAAAGA+TGG | 0.446644 | 3_3:+63792259 | Msa0464160:exon |
| GTAAAAGAAGATGTAATAGA+TGG | 0.452324 | 3_3:-63794581 | None:intergenic |
| AAAACCATATCTACTATTGT+TGG | 0.456596 | 3_3:+63792301 | Msa0464160:CDS |
| CAGTATTATTGGAGCAATAG+TGG | 0.462014 | 3_3:+63794078 | Msa0464160:intron |
| GCCATGGATGCTATCAAGAA+AGG | 0.462957 | 3_3:+63792359 | Msa0464160:CDS |
| AAACACTAACCGCGTAAGCT+GGG | 0.471232 | 3_3:-63793665 | None:intergenic |
| GCGCCACAACTCTCATGCTT+GGG | 0.476115 | 3_3:+63793614 | Msa0464160:CDS |
| CCGGTGACCGGTGGATCATA+GGG | 0.478455 | 3_3:+63793324 | Msa0464160:CDS |
| AGGAATTTGGCCATTTGGCA+TGG | 0.479726 | 3_3:+63794422 | Msa0464160:three_prime_UTR |
| AGAATCTCAAACCACAAAAT+GGG | 0.487607 | 3_3:-63794528 | None:intergenic |
| GTTGCGAGAGACATCGGTGC+AGG | 0.489540 | 3_3:-63793537 | None:intergenic |
| TTACAGCAGCGATGGCATTA+CGG | 0.493658 | 3_3:-63792409 | None:intergenic |
| GCCTTTCTTGATAGCATCCA+TGG | 0.499872 | 3_3:-63792360 | None:intergenic |
| AGGGTACTTTCTCAACGTTA+TGG | 0.500304 | 3_3:-63793517 | None:intergenic |
| TCACCGGTAGCTGCTGTTGT+TGG | 0.503402 | 3_3:-63794207 | None:intergenic |
| ATGATCCACCGGTCACCGGT+GGG | 0.508383 | 3_3:-63793320 | None:intergenic |
| GCAGTATTACATACAAGGTC+TGG | 0.510999 | 3_3:+63793857 | Msa0464160:CDS |
| ATCAATGCTTTGCCCTGCTG+GGG | 0.512067 | 3_3:+63792811 | Msa0464160:CDS |
| ACCGATGTCTCTCGCAACTT+GGG | 0.512509 | 3_3:+63793542 | Msa0464160:CDS |
| CCCTATGATCCACCGGTCAC+CGG | 0.512612 | 3_3:-63793324 | None:intergenic |
| GGCACCATTGTAACATTTGG+AGG | 0.513427 | 3_3:+63793203 | Msa0464160:CDS |
| TTGGGCTTTATCTAGTTGTG+TGG | 0.514435 | 3_3:+63794107 | Msa0464160:CDS |
| GGCCAAAATTAAATGTGTCT+TGG | 0.520070 | 3_3:+63794307 | Msa0464160:exon |
| ACGTTAACTTCATCCCCAGC+AGG | 0.524214 | 3_3:-63792824 | None:intergenic |
| TGAGTCCTCCTTTGTAGGTG+AGG | 0.528022 | 3_3:-63794176 | None:intergenic |
| TCCTCCTTTGTAGGTGAGGG+TGG | 0.533108 | 3_3:-63794172 | None:intergenic |
| ATGCATGTGTTACTAGAAAG+AGG | 0.534032 | 3_3:+63794402 | Msa0464160:three_prime_UTR |
| CCTTCGCATTTCATCTCGAA+AGG | 0.535769 | 3_3:+63792441 | Msa0464160:CDS |
| AATTAGTGCTCCATGCCAAA+TGG | 0.537015 | 3_3:-63794432 | None:intergenic |
| GACCTCACAACACTAACTAC+AGG | 0.541490 | 3_3:-63793254 | None:intergenic |
| TATGATCCACCGGTCACCGG+TGG | 0.544663 | 3_3:-63793321 | None:intergenic |
| TGAGTGACCCCACCGGTGAC+CGG | 0.547224 | 3_3:+63793312 | Msa0464160:CDS |
| TGGCGCACTTCAAAGCTTCG+TGG | 0.550157 | 3_3:+63793575 | Msa0464160:CDS |
| CAGAAAAGTAACAGAGGGCG+CGG | 0.556329 | 3_3:-63792877 | None:intergenic |
| CTACAGGGGATAGTTACATC+AGG | 0.557819 | 3_3:+63793831 | Msa0464160:intron |
| GGGCTTTATCTAGTTGTGTG+GGG | 0.561431 | 3_3:+63794109 | Msa0464160:CDS |
| GAGTCCTCCTTTGTAGGTGA+GGG | 0.563130 | 3_3:-63794175 | None:intergenic |
| TTGTATAAAGAGACATTGAT+CGG | 0.568243 | 3_3:+63794332 | Msa0464160:three_prime_UTR |
| AGCTAACGTTACAGCAGCGA+TGG | 0.569797 | 3_3:-63792417 | None:intergenic |
| GCAATGTGAAATTGCTAATG+TGG | 0.571756 | 3_3:-63792220 | None:intergenic |
| AAAAGAGAGACTCAAAAGAT+GGG | 0.585764 | 3_3:+63792260 | Msa0464160:exon |
| CGCAAACAGAAAAGTAACAG+AGG | 0.588169 | 3_3:-63792883 | None:intergenic |
| GTGACCCCACCGGTGACCGG+TGG | 0.589517 | 3_3:+63793315 | Msa0464160:CDS |
| TGATCCACCGGTCACCGGTG+GGG | 0.592096 | 3_3:-63793319 | None:intergenic |
| TGACCAACAACAGCAGCTAC+CGG | 0.594681 | 3_3:+63794204 | Msa0464160:CDS |
| TATGCCACCCTCACCTACAA+AGG | 0.595290 | 3_3:+63794168 | Msa0464160:CDS |
| ACTCTTTGCCCCAGCTTACG+CGG | 0.595828 | 3_3:+63793656 | Msa0464160:CDS |
| AAAAGCCAGCGCAACCAATG+AGG | 0.596960 | 3_3:-63793358 | None:intergenic |
| GAGCCCAAGCATGAGAGTTG+TGG | 0.598586 | 3_3:-63793617 | None:intergenic |
| AACATGTCCCTATGATCCAC+CGG | 0.601007 | 3_3:-63793331 | None:intergenic |
| TCATTTCTAGGAACTGTCAC+CGG | 0.604984 | 3_3:-63794223 | None:intergenic |
| CCTTTCGAGATGAAATGCGA+AGG | 0.605006 | 3_3:-63792441 | None:intergenic |
| AACACTAACCGCGTAAGCTG+GGG | 0.606336 | 3_3:-63793664 | None:intergenic |
| AGCCAGCGCAACCAATGAGG+AGG | 0.607748 | 3_3:-63793355 | None:intergenic |
| ACCCAAGTTGCGAGAGACAT+CGG | 0.608909 | 3_3:-63793543 | None:intergenic |
| AATACACGGAGAGACATCTT+CGG | 0.610930 | 3_3:-63792619 | None:intergenic |
| GGAGTGCAGTATTACATACA+AGG | 0.611210 | 3_3:+63793852 | Msa0464160:CDS |
| TGTTCCTCCAAATGTTACAA+TGG | 0.620453 | 3_3:-63793207 | None:intergenic |
| GCAAACAGAAAAGTAACAGA+GGG | 0.623135 | 3_3:-63792882 | None:intergenic |
| TTGCTAATGGCTCTGTACAA+AGG | 0.625645 | 3_3:+63793230 | Msa0464160:CDS |
| CTTTCGAGATGAAATGCGAA+GGG | 0.629918 | 3_3:-63792440 | None:intergenic |
| TACCTGCAATATGTAAAATG+CGG | 0.635765 | 3_3:-63793381 | None:intergenic |
| CGTTAACTTCATCCCCAGCA+GGG | 0.639969 | 3_3:-63792823 | None:intergenic |
| CTGGCGGGTAGCATGACTGA+TGG | 0.644522 | 3_3:-63793279 | None:intergenic |
| GGAGAGGATGATGCAAGCCA+AGG | 0.645747 | 3_3:-63793946 | None:intergenic |
| TTGCGAGAGACATCGGTGCA+GGG | 0.646982 | 3_3:-63793536 | None:intergenic |
| GCCACCCTCACCTACAAAGG+AGG | 0.652818 | 3_3:+63794171 | Msa0464160:CDS |
| GTCCTGTAGTTAGTGTTGTG+AGG | 0.655305 | 3_3:+63793252 | Msa0464160:CDS |
| GTTACGATGATCATACGTAC+CGG | 0.664727 | 3_3:-63793921 | None:intergenic |
| AGACTCAAAAGATGGGTGCG+TGG | 0.670730 | 3_3:+63792267 | Msa0464160:exon |
| TATTATTGGAGCAATAGTGG+TGG | 0.673331 | 3_3:+63794081 | Msa0464160:CDS |
| ACATAATCTCTGAAAATACA+CGG | 0.679552 | 3_3:-63792633 | None:intergenic |
| GGTACGTATGATCATCGTAA+CGG | 0.700079 | 3_3:+63793923 | Msa0464160:CDS |
| GAAAATGTGAGTGACCCCAC+CGG | 0.720215 | 3_3:+63793305 | Msa0464160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATGATTAACATTTTAATT+AGG | + | chr3_3:63792552-63792571 | Msa0464160:intron | 10.0% |
| !!! | ACATATTTTTATGTTTATTA+AGG | + | chr3_3:63794014-63794033 | Msa0464160:intron | 10.0% |
| !! | TTGATTAAATAATATTGTTA+AGG | + | chr3_3:63794686-63794705 | Msa0464160:three_prime_UTR | 10.0% |
| !!! | TTTTTGCTTATATTTTGTTA+CGG | + | chr3_3:63792522-63792541 | Msa0464160:intron | 15.0% |
| !! | TTAATCTTTATATCACTATA+TGG | + | chr3_3:63792679-63792698 | Msa0464160:intron | 15.0% |
| !!! | ATTTATAATGCAATACATTT+TGG | + | chr3_3:63792725-63792744 | Msa0464160:intron | 15.0% |
| !! | ACAAAAAAATAATGTCTATA+AGG | + | chr3_3:63793106-63793125 | Msa0464160:intron | 15.0% |
| !! | CAAAAAAATAATGTCTATAA+GGG | + | chr3_3:63793107-63793126 | Msa0464160:intron | 15.0% |
| !!! | TATTTGGTCTAAAATTTGAA+TGG | - | chr3_3:63792482-63792501 | None:intergenic | 20.0% |
| !! | TCAAATAAAGTTAACGTATT+TGG | - | chr3_3:63792498-63792517 | None:intergenic | 20.0% |
| !!! | AAATATGTGTTTCTTTGTTT+TGG | + | chr3_3:63792583-63792602 | Msa0464160:intron | 20.0% |
| !! | GGGATGTTAATTAATTAAAT+TGG | + | chr3_3:63793127-63793146 | Msa0464160:intron | 20.0% |
| !!! | TTTTATGATGACAGTATTAT+TGG | + | chr3_3:63794067-63794086 | Msa0464160:intron | 20.0% |
| !! | TCTAAATTTGTGAAAGTAAA+TGG | + | chr3_3:63794548-63794567 | Msa0464160:three_prime_UTR | 20.0% |
| ! | AAAACCATATCTACTATTGT+TGG | + | chr3_3:63792301-63792320 | Msa0464160:CDS | 25.0% |
| !! | TCTAAAATTTGAATGGAAGA+GGG | - | chr3_3:63792475-63792494 | None:intergenic | 25.0% |
| !!! | AAGAAACACATATTTTAGCA+CGG | - | chr3_3:63792578-63792597 | None:intergenic | 25.0% |
| !! | ACATAATCTCTGAAAATACA+CGG | - | chr3_3:63792636-63792655 | None:intergenic | 25.0% |
| !! | ATTTTCAGAGATTATGTTAC+TGG | + | chr3_3:63792639-63792658 | Msa0464160:CDS | 25.0% |
| !!! | CCTCTAAAACCTTTATATTA+CGG | + | chr3_3:63793038-63793057 | Msa0464160:intron | 25.0% |
| ! | TTAATGTAGCCGTAATATAA+AGG | - | chr3_3:63793050-63793069 | None:intergenic | 25.0% |
| ! | ATTAATTAAATTGGACAGAC+TGG | + | chr3_3:63793136-63793155 | Msa0464160:intron | 25.0% |
| ! | GAAACATGTATGTATATGTT+TGG | + | chr3_3:63793472-63793491 | Msa0464160:intron | 25.0% |
| ! | TAGTAATCAATCACAAGAAA+AGG | - | chr3_3:63793814-63793833 | None:intergenic | 25.0% |
| !! | ATATCGTTACTTTCATTTCT+AGG | - | chr3_3:63794238-63794257 | None:intergenic | 25.0% |
| ! | TTGTATAAAGAGACATTGAT+CGG | + | chr3_3:63794332-63794351 | Msa0464160:three_prime_UTR | 25.0% |
| !! | TGTCATTATCTCTTTGAAAA+TGG | - | chr3_3:63794363-63794382 | None:intergenic | 25.0% |
| ! | CTAATTGCTCATTTAATTAG+TGG | + | chr3_3:63794449-63794468 | Msa0464160:three_prime_UTR | 25.0% |
| ! | GTAAAAGAAGATGTAATAGA+TGG | - | chr3_3:63794584-63794603 | None:intergenic | 25.0% |
| TAAAAGAGAGACTCAAAAGA+TGG | + | chr3_3:63792259-63792278 | Msa0464160:exon | 30.0% | |
| AAAAGAGAGACTCAAAAGAT+GGG | + | chr3_3:63792260-63792279 | Msa0464160:exon | 30.0% | |
| GGTAAACAATGAAGACATAA+TGG | - | chr3_3:63792391-63792410 | None:intergenic | 30.0% | |
| ! | GTCTAAAATTTGAATGGAAG+AGG | - | chr3_3:63792476-63792495 | None:intergenic | 30.0% |
| !!! | TTTGTTTTGGCAGGAAAATT+AGG | + | chr3_3:63792596-63792615 | Msa0464160:intron | 30.0% |
| GTTAAGCGAATCATATATTG+CGG | + | chr3_3:63792959-63792978 | Msa0464160:intron | 30.0% | |
| !! | CCGTAATATAAAGGTTTTAG+AGG | - | chr3_3:63793041-63793060 | None:intergenic | 30.0% |
| ! | ATTGTTAAGCTGACAGTTTT+TGG | - | chr3_3:63793073-63793092 | None:intergenic | 30.0% |
| GCATGTCAAGCAAAAATAAT+CGG | + | chr3_3:63793182-63793201 | Msa0464160:CDS | 30.0% | |
| TACCTGCAATATGTAAAATG+CGG | - | chr3_3:63793384-63793403 | None:intergenic | 30.0% | |
| ! | GTTTAACGTGATGATTTTGT+AGG | + | chr3_3:63793494-63793513 | Msa0464160:intron | 30.0% |
| TTCTTGTGATTGATTACTAC+AGG | + | chr3_3:63793815-63793834 | Msa0464160:intron | 30.0% | |
| TCTTGTGATTGATTACTACA+GGG | + | chr3_3:63793816-63793835 | Msa0464160:intron | 30.0% | |
| AGGTCTGGTTATAAAAACTA+TGG | + | chr3_3:63793872-63793891 | Msa0464160:CDS | 30.0% | |
| GGTCTGGTTATAAAAACTAT+GGG | + | chr3_3:63793873-63793892 | Msa0464160:CDS | 30.0% | |
| TTAAAAGCAGTCACAATAAC+TGG | - | chr3_3:63793900-63793919 | None:intergenic | 30.0% | |
| !! | TATTGTGACTGCTTTTAATC+CGG | + | chr3_3:63793902-63793921 | Msa0464160:CDS | 30.0% |
| ! | ATTTCGAGCTTTGTATTCTT+TGG | - | chr3_3:63794140-63794159 | None:intergenic | 30.0% |
| CGATATTAATGAAGCTCAAT+TGG | + | chr3_3:63794252-63794271 | Msa0464160:CDS | 30.0% | |
| !! | AGCCAAGACACATTTAATTT+TGG | - | chr3_3:63794312-63794331 | None:intergenic | 30.0% |
| TGTTACTAGAAAGAGGAATT+TGG | + | chr3_3:63794409-63794428 | Msa0464160:three_prime_UTR | 30.0% | |
| TTTAATTAGTGGTCACTTGT+TGG | + | chr3_3:63794460-63794479 | Msa0464160:three_prime_UTR | 30.0% | |
| TTAATTAGTGGTCACTTGTT+GGG | + | chr3_3:63794461-63794480 | Msa0464160:three_prime_UTR | 30.0% | |
| !! | TTGTTGGGAGTATTCATTAA+AGG | + | chr3_3:63794476-63794495 | Msa0464160:three_prime_UTR | 30.0% |
| AGAATCTCAAACCACAAAAT+GGG | - | chr3_3:63794531-63794550 | None:intergenic | 30.0% | |
| TAGAATCTCAAACCACAAAA+TGG | - | chr3_3:63794532-63794551 | None:intergenic | 30.0% | |
| GCAATGTGAAATTGCTAATG+TGG | - | chr3_3:63792223-63792242 | None:intergenic | 35.0% | |
| ! | AGTCTCTCTTTTACTCTCTT+GGG | - | chr3_3:63792252-63792271 | None:intergenic | 35.0% |
| ACAGCCAACAATAGTAGATA+TGG | - | chr3_3:63792308-63792327 | None:intergenic | 35.0% | |
| ! | CTATTGTTGGCTGTTCAATT+TGG | + | chr3_3:63792314-63792333 | Msa0464160:CDS | 35.0% |
| !! | TGGTATGTTCATTTTTGCCA+TGG | + | chr3_3:63792343-63792362 | Msa0464160:CDS | 35.0% |
| !!! | ATGTGTTTCTTTGTTTTGGC+AGG | + | chr3_3:63792587-63792606 | Msa0464160:intron | 35.0% |
| GCAAACAGAAAAGTAACAGA+GGG | - | chr3_3:63792885-63792904 | None:intergenic | 35.0% | |
| !!! | CTCTGTTACTTTTCTGTTTG+CGG | + | chr3_3:63792884-63792903 | Msa0464160:CDS | 35.0% |
| CGGTAAAATGCAAACAAATG+CGG | + | chr3_3:63792979-63792998 | Msa0464160:intron | 35.0% | |
| ACTGGAACACATGAAGATTA+AGG | + | chr3_3:63793154-63793173 | Msa0464160:CDS | 35.0% | |
| TGTTCCTCCAAATGTTACAA+TGG | - | chr3_3:63793210-63793229 | None:intergenic | 35.0% | |
| ATTTGGAGGAACATTGCTAA+TGG | + | chr3_3:63793217-63793236 | Msa0464160:CDS | 35.0% | |
| ! | TTCCGCATTTTACATATTGC+AGG | + | chr3_3:63793379-63793398 | Msa0464160:CDS | 35.0% |
| AACTCGAAAGGTGAATTCTA+TGG | - | chr3_3:63793710-63793729 | None:intergenic | 35.0% | |
| CTTGTGATTGATTACTACAG+GGG | + | chr3_3:63793817-63793836 | Msa0464160:intron | 35.0% | |
| CCTTCCAAGAAAAAGTTGTT+CGG | - | chr3_3:63793970-63793989 | None:intergenic | 35.0% | |
| CAGTATTATTGGAGCAATAG+TGG | + | chr3_3:63794078-63794097 | Msa0464160:intron | 35.0% | |
| TATTATTGGAGCAATAGTGG+TGG | + | chr3_3:63794081-63794100 | Msa0464160:CDS | 35.0% | |
| CACAGTGAAGAAAAATGTCA+CGG | + | chr3_3:63794280-63794299 | Msa0464160:CDS | 35.0% | |
| GGCCAAAATTAAATGTGTCT+TGG | + | chr3_3:63794307-63794326 | Msa0464160:exon | 35.0% | |
| ! | ATGCATGTGTTACTAGAAAG+AGG | + | chr3_3:63794402-63794421 | Msa0464160:three_prime_UTR | 35.0% |
| !! | AAAAAGTGTGACCCATTTTG+TGG | + | chr3_3:63794517-63794536 | Msa0464160:three_prime_UTR | 35.0% |
| ! | GAGTCTCTCTTTTACTCTCT+TGG | - | chr3_3:63792253-63792272 | None:intergenic | 40.0% |
| CTTTCGAGATGAAATGCGAA+GGG | - | chr3_3:63792443-63792462 | None:intergenic | 40.0% | |
| AATACACGGAGAGACATCTT+CGG | - | chr3_3:63792622-63792641 | None:intergenic | 40.0% | |
| CGCAAACAGAAAAGTAACAG+AGG | - | chr3_3:63792886-63792905 | None:intergenic | 40.0% | |
| ATCGGCACCATTGTAACATT+TGG | + | chr3_3:63793200-63793219 | Msa0464160:CDS | 40.0% | |
| ! | TTGCTAATGGCTCTGTACAA+AGG | + | chr3_3:63793230-63793249 | Msa0464160:CDS | 40.0% |
| ! | AGGGTACTTTCTCAACGTTA+TGG | - | chr3_3:63793520-63793539 | None:intergenic | 40.0% |
| GTGCGTATTCTAAACTCGAA+AGG | - | chr3_3:63793722-63793741 | None:intergenic | 40.0% | |
| GGAGTGCAGTATTACATACA+AGG | + | chr3_3:63793852-63793871 | Msa0464160:CDS | 40.0% | |
| GCAGTATTACATACAAGGTC+TGG | + | chr3_3:63793857-63793876 | Msa0464160:CDS | 40.0% | |
| GTTACGATGATCATACGTAC+CGG | - | chr3_3:63793924-63793943 | None:intergenic | 40.0% | |
| GGTACGTATGATCATCGTAA+CGG | + | chr3_3:63793923-63793942 | Msa0464160:CDS | 40.0% | |
| CAAGAAAAAGTTGTTCGGAG+AGG | - | chr3_3:63793965-63793984 | None:intergenic | 40.0% | |
| !! | CTCTCCGAACAACTTTTTCT+TGG | + | chr3_3:63793963-63793982 | Msa0464160:CDS | 40.0% |
| !! | CCGAACAACTTTTTCTTGGA+AGG | + | chr3_3:63793967-63793986 | Msa0464160:CDS | 40.0% |
| ! | TTGGGCTTTATCTAGTTGTG+TGG | + | chr3_3:63794107-63794126 | Msa0464160:CDS | 40.0% |
| ! | TGGGCTTTATCTAGTTGTGT+GGG | + | chr3_3:63794108-63794127 | Msa0464160:CDS | 40.0% |
| ! | TCATTTCTAGGAACTGTCAC+CGG | - | chr3_3:63794226-63794245 | None:intergenic | 40.0% |
| GAAGAAAAATGTCACGGTTG+TGG | + | chr3_3:63794286-63794305 | Msa0464160:CDS | 40.0% | |
| GAAAGAGGAATTTGGCCATT+TGG | + | chr3_3:63794417-63794436 | Msa0464160:three_prime_UTR | 40.0% | |
| AATTAGTGCTCCATGCCAAA+TGG | - | chr3_3:63794435-63794454 | None:intergenic | 40.0% | |
| !! | GCTGTTCAATTTGGTTCTGC+TGG | + | chr3_3:63792323-63792342 | Msa0464160:CDS | 45.0% |
| GCCATGGATGCTATCAAGAA+AGG | + | chr3_3:63792359-63792378 | Msa0464160:CDS | 45.0% | |
| ! | GCCTTTCTTGATAGCATCCA+TGG | - | chr3_3:63792363-63792382 | None:intergenic | 45.0% |
| TTACAGCAGCGATGGCATTA+CGG | - | chr3_3:63792412-63792431 | None:intergenic | 45.0% | |
| CCTTTCGAGATGAAATGCGA+AGG | - | chr3_3:63792444-63792463 | None:intergenic | 45.0% | |
| CCTTCGCATTTCATCTCGAA+AGG | + | chr3_3:63792441-63792460 | Msa0464160:CDS | 45.0% | |
| GGCACCATTGTAACATTTGG+AGG | + | chr3_3:63793203-63793222 | Msa0464160:CDS | 45.0% | |
| GTCCTGTAGTTAGTGTTGTG+AGG | + | chr3_3:63793252-63793271 | Msa0464160:CDS | 45.0% | |
| GACCTCACAACACTAACTAC+AGG | - | chr3_3:63793257-63793276 | None:intergenic | 45.0% | |
| AACATGTCCCTATGATCCAC+CGG | - | chr3_3:63793334-63793353 | None:intergenic | 45.0% | |
| GCAACTTGGGTCTGTTTCAT+TGG | + | chr3_3:63793555-63793574 | Msa0464160:CDS | 45.0% | |
| AAACACTAACCGCGTAAGCT+GGG | - | chr3_3:63793668-63793687 | None:intergenic | 45.0% | |
| TTGTGTCCAAATAGCGCAAG+TGG | - | chr3_3:63793748-63793767 | None:intergenic | 45.0% | |
| CTACAGGGGATAGTTACATC+AGG | + | chr3_3:63793831-63793850 | Msa0464160:intron | 45.0% | |
| TATGATCATCGTAACGGCCT+TGG | + | chr3_3:63793929-63793948 | Msa0464160:CDS | 45.0% | |
| GAGCAATAGTGGTGGTTCTT+GGG | + | chr3_3:63794089-63794108 | Msa0464160:CDS | 45.0% | |
| ! | GGGCTTTATCTAGTTGTGTG+GGG | + | chr3_3:63794109-63794128 | Msa0464160:CDS | 45.0% |
| TGCAATGAGTCCTCCTTTGT+AGG | - | chr3_3:63794184-63794203 | None:intergenic | 45.0% | |
| AGGAATTTGGCCATTTGGCA+TGG | + | chr3_3:63794422-63794441 | Msa0464160:three_prime_UTR | 45.0% | |
| AGACTCAAAAGATGGGTGCG+TGG | + | chr3_3:63792267-63792286 | Msa0464160:exon | 50.0% | |
| AGCTAACGTTACAGCAGCGA+TGG | - | chr3_3:63792420-63792439 | None:intergenic | 50.0% | |
| TGATCAATGCTTTGCCCTGC+TGG | + | chr3_3:63792809-63792828 | Msa0464160:CDS | 50.0% | |
| GATCAATGCTTTGCCCTGCT+GGG | + | chr3_3:63792810-63792829 | Msa0464160:CDS | 50.0% | |
| ATCAATGCTTTGCCCTGCTG+GGG | + | chr3_3:63792811-63792830 | Msa0464160:CDS | 50.0% | |
| CGTTAACTTCATCCCCAGCA+GGG | - | chr3_3:63792826-63792845 | None:intergenic | 50.0% | |
| ACGTTAACTTCATCCCCAGC+AGG | - | chr3_3:63792827-63792846 | None:intergenic | 50.0% | |
| CAGAAAAGTAACAGAGGGCG+CGG | - | chr3_3:63792880-63792899 | None:intergenic | 50.0% | |
| !! | ACTCACATTTTCAGGCTGGC+GGG | - | chr3_3:63793297-63793316 | None:intergenic | 50.0% |
| !! | CACTCACATTTTCAGGCTGG+CGG | - | chr3_3:63793298-63793317 | None:intergenic | 50.0% |
| !! | GGTCACTCACATTTTCAGGC+TGG | - | chr3_3:63793301-63793320 | None:intergenic | 50.0% |
| ! | GTGGGGTCACTCACATTTTC+AGG | - | chr3_3:63793305-63793324 | None:intergenic | 50.0% |
| GAAAATGTGAGTGACCCCAC+CGG | + | chr3_3:63793305-63793324 | Msa0464160:CDS | 50.0% | |
| GGGACATGTTTCCTCCTCAT+TGG | + | chr3_3:63793344-63793363 | Msa0464160:CDS | 50.0% | |
| AAAAGCCAGCGCAACCAATG+AGG | - | chr3_3:63793361-63793380 | None:intergenic | 50.0% | |
| ACCGATGTCTCTCGCAACTT+GGG | + | chr3_3:63793542-63793561 | Msa0464160:CDS | 50.0% | |
| ACCCAAGTTGCGAGAGACAT+CGG | - | chr3_3:63793546-63793565 | None:intergenic | 50.0% | |
| AACTCTCATGCTTGGGCTCT+TGG | + | chr3_3:63793621-63793640 | Msa0464160:CDS | 50.0% | |
| TCATGCTTGGGCTCTTGGTT+GGG | + | chr3_3:63793626-63793645 | Msa0464160:CDS | 50.0% | |
| AACACTAACCGCGTAAGCTG+GGG | - | chr3_3:63793667-63793686 | None:intergenic | 50.0% | |
| GAAACACTAACCGCGTAAGC+TGG | - | chr3_3:63793669-63793688 | None:intergenic | 50.0% | |
| CACCAACCACTTGCGCTATT+TGG | + | chr3_3:63793739-63793758 | Msa0464160:intron | 50.0% | |
| GTCCAAATAGCGCAAGTGGT+TGG | - | chr3_3:63793744-63793763 | None:intergenic | 50.0% | |
| GGAGCAATAGTGGTGGTTCT+TGG | + | chr3_3:63794088-63794107 | Msa0464160:CDS | 50.0% | |
| TATGCCACCCTCACCTACAA+AGG | + | chr3_3:63794168-63794187 | Msa0464160:CDS | 50.0% | |
| GAGTCCTCCTTTGTAGGTGA+GGG | - | chr3_3:63794178-63794197 | None:intergenic | 50.0% | |
| TGAGTCCTCCTTTGTAGGTG+AGG | - | chr3_3:63794179-63794198 | None:intergenic | 50.0% | |
| TGACCAACAACAGCAGCTAC+CGG | + | chr3_3:63794204-63794223 | Msa0464160:CDS | 50.0% | |
| ! | TTCCTCCTCATTGGTTGCGC+TGG | + | chr3_3:63793353-63793372 | Msa0464160:CDS | 55.0% |
| TTGCGAGAGACATCGGTGCA+GGG | - | chr3_3:63793539-63793558 | None:intergenic | 55.0% | |
| CACCGATGTCTCTCGCAACT+TGG | + | chr3_3:63793541-63793560 | Msa0464160:CDS | 55.0% | |
| TGGCGCACTTCAAAGCTTCG+TGG | + | chr3_3:63793575-63793594 | Msa0464160:CDS | 55.0% | |
| AGCGCCACAACTCTCATGCT+TGG | + | chr3_3:63793613-63793632 | Msa0464160:CDS | 55.0% | |
| GCGCCACAACTCTCATGCTT+GGG | + | chr3_3:63793614-63793633 | Msa0464160:CDS | 55.0% | |
| GAGCCCAAGCATGAGAGTTG+TGG | - | chr3_3:63793620-63793639 | None:intergenic | 55.0% | |
| CTCATGCTTGGGCTCTTGGT+TGG | + | chr3_3:63793625-63793644 | Msa0464160:CDS | 55.0% | |
| ACTCTTTGCCCCAGCTTACG+CGG | + | chr3_3:63793656-63793675 | Msa0464160:CDS | 55.0% | |
| GGAGAGGATGATGCAAGCCA+AGG | - | chr3_3:63793949-63793968 | None:intergenic | 55.0% | |
| TCCTCCTTTGTAGGTGAGGG+TGG | - | chr3_3:63794175-63794194 | None:intergenic | 55.0% | |
| TCACCGGTAGCTGCTGTTGT+TGG | - | chr3_3:63794210-63794229 | None:intergenic | 55.0% | |
| ! | CTGGCGGGTAGCATGACTGA+TGG | - | chr3_3:63793282-63793301 | None:intergenic | 60.0% |
| ATGATCCACCGGTCACCGGT+GGG | - | chr3_3:63793323-63793342 | None:intergenic | 60.0% | |
| TATGATCCACCGGTCACCGG+TGG | - | chr3_3:63793324-63793343 | None:intergenic | 60.0% | |
| ACCGGTGACCGGTGGATCAT+AGG | + | chr3_3:63793323-63793342 | Msa0464160:CDS | 60.0% | |
| CCCTATGATCCACCGGTCAC+CGG | - | chr3_3:63793327-63793346 | None:intergenic | 60.0% | |
| CCGGTGACCGGTGGATCATA+GGG | + | chr3_3:63793324-63793343 | Msa0464160:CDS | 60.0% | |
| AGCCAGCGCAACCAATGAGG+AGG | - | chr3_3:63793358-63793377 | None:intergenic | 60.0% | |
| GTTGCGAGAGACATCGGTGC+AGG | - | chr3_3:63793540-63793559 | None:intergenic | 60.0% | |
| GCCACCCTCACCTACAAAGG+AGG | + | chr3_3:63794171-63794190 | Msa0464160:CDS | 60.0% | |
| TGAGTGACCCCACCGGTGAC+CGG | + | chr3_3:63793312-63793331 | Msa0464160:CDS | 65.0% | |
| TGATCCACCGGTCACCGGTG+GGG | - | chr3_3:63793322-63793341 | None:intergenic | 65.0% | |
| GTGACCCCACCGGTGACCGG+TGG | + | chr3_3:63793315-63793334 | Msa0464160:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 63792211 | 63794711 | 63792211 | ID=Msa0464160;Name=Msa0464160 |
| chr3_3 | mRNA | 63792211 | 63794711 | 63792211 | ID=Msa0464160-mRNA-1;Parent=Msa0464160;Name=Msa0464160-mRNA-1;_AED=0.34;_eAED=0.34;_QI=67|1|1|1|1|1|7|393|387 |
| chr3_3 | exon | 63792211 | 63792462 | 63792211 | ID=Msa0464160-mRNA-1:exon:14003;Parent=Msa0464160-mRNA-1 |
| chr3_3 | exon | 63792609 | 63792671 | 63792609 | ID=Msa0464160-mRNA-1:exon:14004;Parent=Msa0464160-mRNA-1 |
| chr3_3 | exon | 63792800 | 63792916 | 63792800 | ID=Msa0464160-mRNA-1:exon:14005;Parent=Msa0464160-mRNA-1 |
| chr3_3 | exon | 63793154 | 63793400 | 63793154 | ID=Msa0464160-mRNA-1:exon:14006;Parent=Msa0464160-mRNA-1 |
| chr3_3 | exon | 63793516 | 63793677 | 63793516 | ID=Msa0464160-mRNA-1:exon:14007;Parent=Msa0464160-mRNA-1 |
| chr3_3 | exon | 63793837 | 63793988 | 63793837 | ID=Msa0464160-mRNA-1:exon:14008;Parent=Msa0464160-mRNA-1 |
| chr3_3 | exon | 63794081 | 63794711 | 63794081 | ID=Msa0464160-mRNA-1:exon:14009;Parent=Msa0464160-mRNA-1 |
| chr3_3 | five_prime_UTR | 63792211 | 63792277 | 63792211 | ID=Msa0464160-mRNA-1:five_prime_utr;Parent=Msa0464160-mRNA-1 |
| chr3_3 | CDS | 63792278 | 63792462 | 63792278 | ID=Msa0464160-mRNA-1:cds;Parent=Msa0464160-mRNA-1 |
| chr3_3 | CDS | 63792609 | 63792671 | 63792609 | ID=Msa0464160-mRNA-1:cds;Parent=Msa0464160-mRNA-1 |
| chr3_3 | CDS | 63792800 | 63792916 | 63792800 | ID=Msa0464160-mRNA-1:cds;Parent=Msa0464160-mRNA-1 |
| chr3_3 | CDS | 63793154 | 63793400 | 63793154 | ID=Msa0464160-mRNA-1:cds;Parent=Msa0464160-mRNA-1 |
| chr3_3 | CDS | 63793516 | 63793677 | 63793516 | ID=Msa0464160-mRNA-1:cds;Parent=Msa0464160-mRNA-1 |
| chr3_3 | CDS | 63793837 | 63793988 | 63793837 | ID=Msa0464160-mRNA-1:cds;Parent=Msa0464160-mRNA-1 |
| chr3_3 | CDS | 63794081 | 63794318 | 63794081 | ID=Msa0464160-mRNA-1:cds;Parent=Msa0464160-mRNA-1 |
| chr3_3 | three_prime_UTR | 63794319 | 63794711 | 63794319 | ID=Msa0464160-mRNA-1:three_prime_utr;Parent=Msa0464160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
