Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084800 | RHN47394.1 | 83.721 | 86 | 14 | 0 | 1 | 86 | 24 | 109 | 5.50e-45 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084800 | sp|A4ZDG8|BSMT3_PETHY | 47.126 | 87 | 40 | 1 | 10 | 90 | 163 | 249 | 1.63e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084800 | A0A396H6P2 | 83.721 | 86 | 14 | 0 | 1 | 86 | 24 | 109 | 2.63e-45 | 154 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004990 | Msa1084800 | 0.803899 | 2.796776e-49 | -8.615850e-47 |
| Msa0012800 | Msa1084800 | 0.821578 | 3.747033e-53 | -8.615850e-47 |
| Msa0024650 | Msa1084800 | 0.837716 | 4.411019e-57 | -8.615850e-47 |
| Msa0036550 | Msa1084800 | 0.835549 | 1.573168e-56 | -8.615850e-47 |
| Msa0038010 | Msa1084800 | 0.854791 | 9.729638e-62 | -8.615850e-47 |
| Msa0046050 | Msa1084800 | -0.802450 | 5.577214e-49 | -8.615850e-47 |
| Msa0048950 | Msa1084800 | 0.800953 | 1.131761e-48 | -8.615850e-47 |
| Msa0053040 | Msa1084800 | 0.802242 | 6.157201e-49 | -8.615850e-47 |
| Msa0059880 | Msa1084800 | 0.802911 | 4.481702e-49 | -8.615850e-47 |
| Msa0080010 | Msa1084800 | 0.802580 | 5.244360e-49 | -8.615850e-47 |
| Msa0084390 | Msa1084800 | 0.807296 | 5.417103e-50 | -8.615850e-47 |
| Msa0085710 | Msa1084800 | 0.835767 | 1.384895e-56 | -8.615850e-47 |
| Msa0099890 | Msa1084800 | 0.801710 | 7.918949e-49 | -8.615850e-47 |
| Msa0120450 | Msa1084800 | 0.826845 | 2.168746e-54 | -8.615850e-47 |
| Msa0604200 | Msa1084800 | 0.812527 | 4.054221e-51 | -8.615850e-47 |
| Msa0604280 | Msa1084800 | 0.801255 | 9.813073e-49 | -8.615850e-47 |
| Msa0605470 | Msa1084800 | 0.816309 | 5.909220e-52 | -8.615850e-47 |
| Msa0614960 | Msa1084800 | 0.810727 | 9.983000e-51 | -8.615850e-47 |
| Msa0622890 | Msa1084800 | 0.813632 | 2.320322e-51 | -8.615850e-47 |
| Msa0626980 | Msa1084800 | 0.801516 | 8.679258e-49 | -8.615850e-47 |
| Msa0643230 | Msa1084800 | 0.801827 | 7.494247e-49 | -8.615850e-47 |
| Msa0645370 | Msa1084800 | 0.802150 | 6.432259e-49 | -8.615850e-47 |
| Msa0651090 | Msa1084800 | 0.816775 | 4.648365e-52 | -8.615850e-47 |
| Msa0655370 | Msa1084800 | 0.835532 | 1.588964e-56 | -8.615850e-47 |
| Msa0670360 | Msa1084800 | 0.810668 | 1.028173e-50 | -8.615850e-47 |
| Msa0673940 | Msa1084800 | 0.809362 | 1.964585e-50 | -8.615850e-47 |
| Msa0684560 | Msa1084800 | 0.817291 | 3.557751e-52 | -8.615850e-47 |
| Msa0699170 | Msa1084800 | 0.810619 | 1.053416e-50 | -8.615850e-47 |
| Msa0705810 | Msa1084800 | -0.801531 | 8.619386e-49 | -8.615850e-47 |
| Msa0708020 | Msa1084800 | 0.802292 | 6.012386e-49 | -8.615850e-47 |
| Msa0711240 | Msa1084800 | 0.813945 | 1.979725e-51 | -8.615850e-47 |
| Msa0715250 | Msa1084800 | 0.802552 | 5.315177e-49 | -8.615850e-47 |
| Msa0716980 | Msa1084800 | 0.848905 | 4.550402e-60 | -8.615850e-47 |
| Msa0717030 | Msa1084800 | 0.813381 | 2.634430e-51 | -8.615850e-47 |
| Msa0730890 | Msa1084800 | 0.810698 | 1.012869e-50 | -8.615850e-47 |
| Msa0732970 | Msa1084800 | 0.821197 | 4.588065e-53 | -8.615850e-47 |
| Msa0738410 | Msa1084800 | 0.822824 | 1.926166e-53 | -8.615850e-47 |
| Msa0750790 | Msa1084800 | 0.831305 | 1.800069e-55 | -8.615850e-47 |
| Msa0757220 | Msa1084800 | 0.805733 | 1.157804e-49 | -8.615850e-47 |
| Msa0758150 | Msa1084800 | 0.864821 | 9.227207e-65 | -8.615850e-47 |
| Msa0768670 | Msa1084800 | 0.809837 | 1.552954e-50 | -8.615850e-47 |
| Msa0776340 | Msa1084800 | 0.808403 | 3.151461e-50 | -8.615850e-47 |
| Msa0798240 | Msa1084800 | 0.805505 | 1.292603e-49 | -8.615850e-47 |
| Msa0799110 | Msa1084800 | 0.819453 | 1.152267e-52 | -8.615850e-47 |
| Msa0799120 | Msa1084800 | 0.802168 | 6.374827e-49 | -8.615850e-47 |
| Msa0813610 | Msa1084800 | 0.809284 | 2.042221e-50 | -8.615850e-47 |
| Msa0813840 | Msa1084800 | 0.822655 | 2.109148e-53 | -8.615850e-47 |
| Msa0814160 | Msa1084800 | 0.809074 | 2.264723e-50 | -8.615850e-47 |
| Msa0816140 | Msa1084800 | 0.804204 | 2.417078e-49 | -8.615850e-47 |
| Msa0817100 | Msa1084800 | 0.870927 | 1.007896e-66 | -8.615850e-47 |
| Msa0824850 | Msa1084800 | 0.807192 | 5.699245e-50 | -8.615850e-47 |
| Msa0824860 | Msa1084800 | 0.810223 | 1.282703e-50 | -8.615850e-47 |
| Msa0831450 | Msa1084800 | 0.810975 | 8.821256e-51 | -8.615850e-47 |
| Msa0839040 | Msa1084800 | 0.806074 | 9.814250e-50 | -8.615850e-47 |
| Msa0125600 | Msa1084800 | 0.809325 | 2.000931e-50 | -8.615850e-47 |
| Msa0130360 | Msa1084800 | 0.822114 | 2.816349e-53 | -8.615850e-47 |
| Msa0130710 | Msa1084800 | 0.832133 | 1.124700e-55 | -8.615850e-47 |
| Msa0132250 | Msa1084800 | 0.833714 | 4.550486e-56 | -8.615850e-47 |
| Msa0136090 | Msa1084800 | 0.827367 | 1.626930e-54 | -8.615850e-47 |
| Msa0150910 | Msa1084800 | 0.807498 | 4.907423e-50 | -8.615850e-47 |
| Msa0163690 | Msa1084800 | 0.824209 | 9.134942e-54 | -8.615850e-47 |
| Msa0170760 | Msa1084800 | 0.807977 | 3.883557e-50 | -8.615850e-47 |
| Msa0175060 | Msa1084800 | 0.812616 | 3.876515e-51 | -8.615850e-47 |
| Msa0176600 | Msa1084800 | 0.837643 | 4.606687e-57 | -8.615850e-47 |
| Msa0184390 | Msa1084800 | 0.807759 | 4.319867e-50 | -8.615850e-47 |
| Msa0188560 | Msa1084800 | 0.806281 | 8.878510e-50 | -8.615850e-47 |
| Msa0206370 | Msa1084800 | 0.801037 | 1.087789e-48 | -8.615850e-47 |
| Msa0219810 | Msa1084800 | 0.811356 | 7.294257e-51 | -8.615850e-47 |
| Msa0230920 | Msa1084800 | 0.801624 | 8.248928e-49 | -8.615850e-47 |
| Msa0235080 | Msa1084800 | 0.814513 | 1.483197e-51 | -8.615850e-47 |
| Msa0364550 | Msa1084800 | 0.815931 | 7.177619e-52 | -8.615850e-47 |
| Msa0370620 | Msa1084800 | 0.814524 | 1.474960e-51 | -8.615850e-47 |
| Msa0384170 | Msa1084800 | 0.819461 | 1.147410e-52 | -8.615850e-47 |
| Msa0396860 | Msa1084800 | 0.817462 | 3.256074e-52 | -8.615850e-47 |
| Msa0409500 | Msa1084800 | 0.814012 | 1.912986e-51 | -8.615850e-47 |
| Msa0414480 | Msa1084800 | 0.817373 | 3.410503e-52 | -8.615850e-47 |
| Msa0418160 | Msa1084800 | 0.801728 | 7.851147e-49 | -8.615850e-47 |
| Msa0423630 | Msa1084800 | 0.821446 | 4.021391e-53 | -8.615850e-47 |
| Msa0430040 | Msa1084800 | -0.807890 | 4.052621e-50 | -8.615850e-47 |
| Msa0433090 | Msa1084800 | 0.816955 | 4.235240e-52 | -8.615850e-47 |
| Msa0437790 | Msa1084800 | -0.805457 | 1.322410e-49 | -8.615850e-47 |
| Msa0444210 | Msa1084800 | 0.824294 | 8.726597e-54 | -8.615850e-47 |
| Msa0448310 | Msa1084800 | 0.811424 | 7.050113e-51 | -8.615850e-47 |
| Msa0464160 | Msa1084800 | 0.812874 | 3.404335e-51 | -8.615850e-47 |
| Msa0464310 | Msa1084800 | 0.828821 | 7.262884e-55 | -8.615850e-47 |
| Msa0985250 | Msa1084800 | 0.807257 | 5.522413e-50 | -8.615850e-47 |
| Msa0985380 | Msa1084800 | 0.803511 | 3.365866e-49 | -8.615850e-47 |
| Msa0985700 | Msa1084800 | 0.812912 | 3.339723e-51 | -8.615850e-47 |
| Msa0987550 | Msa1084800 | 0.823711 | 1.195715e-53 | -8.615850e-47 |
| Msa0996990 | Msa1084800 | 0.806062 | 9.873016e-50 | -8.615850e-47 |
| Msa1003110 | Msa1084800 | 0.801596 | 8.357706e-49 | -8.615850e-47 |
| Msa1007930 | Msa1084800 | 0.828940 | 6.798672e-55 | -8.615850e-47 |
| Msa1019220 | Msa1084800 | 0.822077 | 2.872043e-53 | -8.615850e-47 |
| Msa1019230 | Msa1084800 | 0.812789 | 3.551892e-51 | -8.615850e-47 |
| Msa1021620 | Msa1084800 | 0.802033 | 6.795882e-49 | -8.615850e-47 |
| Msa1024420 | Msa1084800 | 0.813059 | 3.100146e-51 | -8.615850e-47 |
| Msa1029860 | Msa1084800 | 0.800635 | 1.313764e-48 | -8.615850e-47 |
| Msa1031060 | Msa1084800 | 0.926999 | 2.161178e-91 | -8.615850e-47 |
| Msa1036590 | Msa1084800 | 0.813700 | 2.241649e-51 | -8.615850e-47 |
| Msa1040330 | Msa1084800 | 0.814499 | 1.493166e-51 | -8.615850e-47 |
| Msa1048390 | Msa1084800 | 0.825343 | 4.935619e-54 | -8.615850e-47 |
| Msa1049400 | Msa1084800 | 0.804341 | 2.262645e-49 | -8.615850e-47 |
| Msa1061670 | Msa1084800 | 0.810877 | 9.262197e-51 | -8.615850e-47 |
| Msa1063260 | Msa1084800 | 0.812804 | 3.524931e-51 | -8.615850e-47 |
| Msa1064940 | Msa1084800 | 0.808864 | 2.512186e-50 | -8.615850e-47 |
| Msa1068730 | Msa1084800 | 0.811677 | 6.212110e-51 | -8.615850e-47 |
| Msa1075030 | Msa1084800 | 0.807692 | 4.463470e-50 | -8.615850e-47 |
| Msa1076830 | Msa1084800 | 0.805893 | 1.071475e-49 | -8.615850e-47 |
| Msa1076900 | Msa1084800 | 0.816567 | 5.174304e-52 | -8.615850e-47 |
| Msa1084800 | Msa1085560 | 0.813834 | 2.094173e-51 | -8.615850e-47 |
| Msa1084800 | Msa1085820 | 0.828549 | 8.451458e-55 | -8.615850e-47 |
| Msa1084800 | Msa1090990 | 0.802473 | 5.518801e-49 | -8.615850e-47 |
| Msa1084800 | Msa1099640 | 0.823789 | 1.146184e-53 | -8.615850e-47 |
| Msa1084800 | Msa1100330 | 0.822049 | 2.915261e-53 | -8.615850e-47 |
| Msa1084800 | Msa1104130 | 0.810470 | 1.134243e-50 | -8.615850e-47 |
| Msa1084800 | Msa1106960 | 0.808987 | 2.363831e-50 | -8.615850e-47 |
| Msa1084800 | Msa1107520 | 0.827386 | 1.609661e-54 | -8.615850e-47 |
| Msa1084800 | Msa1108610 | 0.805982 | 1.026166e-49 | -8.615850e-47 |
| Msa1084800 | Msa1109540 | 0.800300 | 1.537334e-48 | -8.615850e-47 |
| Msa1084800 | Msa1109880 | 0.801577 | 8.432760e-49 | -8.615850e-47 |
| Msa1084800 | Msa1115900 | 0.816344 | 5.803075e-52 | -8.615850e-47 |
| Msa1084800 | Msa1119670 | 0.942691 | 4.583771e-102 | -8.615850e-47 |
| Msa1084800 | Msa1120960 | 0.805242 | 1.467160e-49 | -8.615850e-47 |
| Msa1084800 | Msa1126530 | 0.800610 | 1.329598e-48 | -8.615850e-47 |
| Msa1084800 | Msa1133860 | 0.800303 | 1.535421e-48 | -8.615850e-47 |
| Msa1084800 | Msa1152330 | 0.807894 | 4.044028e-50 | -8.615850e-47 |
| Msa1084800 | Msa1160540 | 0.836109 | 1.134447e-56 | -8.615850e-47 |
| Msa1084800 | Msa1162370 | 0.801065 | 1.073226e-48 | -8.615850e-47 |
| Msa1084800 | Msa1164240 | 0.804577 | 2.020620e-49 | -8.615850e-47 |
| Msa1084800 | Msa1165860 | 0.804072 | 2.574304e-49 | -8.615850e-47 |
| Msa1084800 | Msa1187750 | 0.808908 | 2.458222e-50 | -8.615850e-47 |
| Msa1084800 | Msa1191270 | 0.818470 | 1.927441e-52 | -8.615850e-47 |
| Msa1084800 | Msa1211160 | 0.825266 | 5.147512e-54 | -8.615850e-47 |
| Msa1084800 | Msa1211320 | 0.818244 | 2.169082e-52 | -8.615850e-47 |
| Msa1084800 | Msa1223960 | 0.804338 | 2.266805e-49 | -8.615850e-47 |
| Msa1084800 | Msa1254670 | 0.810089 | 1.370633e-50 | -8.615850e-47 |
| Msa1084800 | Msa1255710 | 0.828274 | 9.845821e-55 | -8.615850e-47 |
| Msa1084800 | Msa1259570 | 0.818381 | 2.019160e-52 | -8.615850e-47 |
| Msa1084800 | Msa1262320 | 0.802361 | 5.820105e-49 | -8.615850e-47 |
| Msa1084800 | Msa1263110 | 0.816125 | 6.495464e-52 | -8.615850e-47 |
| Msa1084800 | Msa1273320 | 0.829624 | 4.638098e-55 | -8.615850e-47 |
| Msa1084800 | Msa1299310 | 0.820191 | 7.812768e-53 | -8.615850e-47 |
| Msa1084800 | Msa1329770 | 0.806879 | 6.638014e-50 | -8.615850e-47 |
| Msa1084800 | Msa1338510 | 0.960712 | 7.219328e-119 | -8.615850e-47 |
| Msa1084800 | Msa1349420 | 0.830648 | 2.609714e-55 | -8.615850e-47 |
| Msa1084800 | Msa1355340 | 0.819727 | 9.977663e-53 | -8.615850e-47 |
| Msa1084800 | Msa1357840 | 0.828501 | 8.682064e-55 | -8.615850e-47 |
| Msa1084800 | Msa1362590 | 0.820160 | 7.941226e-53 | -8.615850e-47 |
| Msa1084800 | Msa1363690 | 0.866264 | 3.237010e-65 | -8.615850e-47 |
| Msa1084800 | Msa1364690 | 0.829688 | 4.476457e-55 | -8.615850e-47 |
| Msa1084800 | Msa1369180 | -0.801580 | 8.420466e-49 | -8.615850e-47 |
| Msa1084800 | Msa1373390 | -0.806580 | 7.679393e-50 | -8.615850e-47 |
| Msa1084800 | Msa1373560 | 0.805513 | 1.287209e-49 | -8.615850e-47 |
| Msa1084800 | Msa1376070 | 0.814114 | 1.817101e-51 | -8.615850e-47 |
| Msa1084800 | Msa1377190 | 0.815762 | 7.827431e-52 | -8.615850e-47 |
| Msa1084800 | Msa1377460 | 0.812273 | 4.606019e-51 | -8.615850e-47 |
| Msa1084800 | Msa1377520 | 0.825648 | 4.180633e-54 | -8.615850e-47 |
| Msa1084800 | Msa1378950 | 0.870926 | 1.008317e-66 | -8.615850e-47 |
| Msa1084800 | Msa1387480 | 0.811886 | 5.593527e-51 | -8.615850e-47 |
| Msa1084800 | Msa1395720 | 0.828901 | 6.949422e-55 | -8.615850e-47 |
| Msa1084800 | Msa1396550 | 0.862473 | 4.944666e-64 | -8.615850e-47 |
| Msa1084800 | Msa1417220 | 0.858359 | 8.697369e-63 | -8.615850e-47 |
| Msa1084800 | Msa1421130 | 0.804563 | 2.033951e-49 | -8.615850e-47 |
| Msa1084800 | Msa1434700 | 0.819076 | 1.404493e-52 | -8.615850e-47 |
| Msa1084800 | Msa1437590 | 0.825295 | 5.066270e-54 | -8.615850e-47 |
| Msa1084800 | Msa1441450 | 0.817966 | 2.506697e-52 | -8.615850e-47 |
| Msa1084800 | Msa1445780 | 0.857566 | 1.495761e-62 | -8.615850e-47 |
| Msa1084800 | Msa1458270 | 0.819851 | 9.347068e-53 | -8.615850e-47 |
| Msa1084800 | Msa1461660 | 0.801906 | 7.219183e-49 | -8.615850e-47 |
| Msa1084800 | Msa1463640 | 0.809518 | 1.818755e-50 | -8.615850e-47 |
| Msa0244310 | Msa1084800 | 0.827090 | 1.895758e-54 | -8.615850e-47 |
| Msa0247780 | Msa1084800 | 0.804338 | 2.266587e-49 | -8.615850e-47 |
| Msa0269240 | Msa1084800 | 0.814342 | 1.618128e-51 | -8.615850e-47 |
| Msa0269720 | Msa1084800 | 0.800162 | 1.640216e-48 | -8.615850e-47 |
| Msa0278940 | Msa1084800 | 0.808795 | 2.598122e-50 | -8.615850e-47 |
| Msa0321240 | Msa1084800 | 0.815240 | 1.022853e-51 | -8.615850e-47 |
| Msa0336430 | Msa1084800 | 0.831305 | 1.800092e-55 | -8.615850e-47 |
| Msa0336460 | Msa1084800 | 0.808088 | 3.677012e-50 | -8.615850e-47 |
| Msa0336520 | Msa1084800 | 0.815459 | 9.144107e-52 | -8.615850e-47 |
| Msa0336640 | Msa1084800 | 0.840434 | 8.714348e-58 | -8.615850e-47 |
| Msa0354600 | Msa1084800 | 0.814053 | 1.874074e-51 | -8.615850e-47 |
| Msa0357470 | Msa1084800 | 0.809135 | 2.198020e-50 | -8.615850e-47 |
| Msa0357510 | Msa1084800 | 0.800569 | 1.354971e-48 | -8.615850e-47 |
| Msa0357530 | Msa1084800 | 0.800534 | 1.377805e-48 | -8.615850e-47 |
| Msa0361700 | Msa1084800 | 0.804293 | 2.316102e-49 | -8.615850e-47 |
| Msa0485290 | Msa1084800 | 0.805074 | 1.591163e-49 | -8.615850e-47 |
| Msa0487100 | Msa1084800 | 0.831603 | 1.519834e-55 | -8.615850e-47 |
| Msa0487110 | Msa1084800 | 0.853566 | 2.195900e-61 | -8.615850e-47 |
| Msa0491770 | Msa1084800 | 0.804406 | 2.193106e-49 | -8.615850e-47 |
| Msa0502940 | Msa1084800 | 0.810664 | 1.030331e-50 | -8.615850e-47 |
| Msa0524710 | Msa1084800 | 0.824170 | 9.330643e-54 | -8.615850e-47 |
| Msa0525400 | Msa1084800 | 0.825204 | 5.323605e-54 | -8.615850e-47 |
| Msa0530660 | Msa1084800 | 0.802886 | 4.534216e-49 | -8.615850e-47 |
| Msa0531030 | Msa1084800 | 0.815624 | 8.406044e-52 | -8.615850e-47 |
| Msa0531040 | Msa1084800 | 0.823995 | 1.025750e-53 | -8.615850e-47 |
| Msa0531080 | Msa1084800 | 0.819713 | 1.005189e-52 | -8.615850e-47 |
| Msa0535570 | Msa1084800 | 0.804744 | 1.865170e-49 | -8.615850e-47 |
| Msa0540640 | Msa1084800 | 0.805245 | 1.464805e-49 | -8.615850e-47 |
| Msa0549170 | Msa1084800 | 0.826160 | 3.159170e-54 | -8.615850e-47 |
| Msa0561830 | Msa1084800 | 0.823498 | 1.341420e-53 | -8.615850e-47 |
| Msa0568920 | Msa1084800 | 0.809058 | 2.282462e-50 | -8.615850e-47 |
| Msa0576500 | Msa1084800 | -0.805305 | 1.423573e-49 | -8.615850e-47 |
| Msa0579530 | Msa1084800 | 0.801751 | 7.768086e-49 | -8.615850e-47 |
| Msa0587180 | Msa1084800 | 0.804016 | 2.644660e-49 | -8.615850e-47 |
| Msa0587730 | Msa1084800 | 0.834669 | 2.622538e-56 | -8.615850e-47 |
| Msa0587920 | Msa1084800 | 0.827633 | 1.404467e-54 | -8.615850e-47 |
| Msa0587930 | Msa1084800 | 0.818962 | 1.490813e-52 | -8.615850e-47 |
| Msa0597800 | Msa1084800 | 0.805048 | 1.610933e-49 | -8.615850e-47 |
| Msa0597820 | Msa1084800 | 0.808425 | 3.117512e-50 | -8.615850e-47 |
| Msa0602100 | Msa1084800 | 0.800015 | 1.757438e-48 | -8.615850e-47 |
| Msa0847140 | Msa1084800 | 0.824166 | 9.353770e-54 | -8.615850e-47 |
| Msa0853080 | Msa1084800 | 0.810544 | 1.093627e-50 | -8.615850e-47 |
| Msa0854840 | Msa1084800 | 0.808708 | 2.711839e-50 | -8.615850e-47 |
| Msa0863840 | Msa1084800 | 0.818083 | 2.358757e-52 | -8.615850e-47 |
| Msa0863850 | Msa1084800 | 0.800678 | 1.287962e-48 | -8.615850e-47 |
| Msa0864160 | Msa1084800 | 0.803599 | 3.227385e-49 | -8.615850e-47 |
| Msa0883640 | Msa1084800 | 0.812933 | 3.303803e-51 | -8.615850e-47 |
| Msa0886370 | Msa1084800 | 0.827274 | 1.712968e-54 | -8.615850e-47 |
| Msa0890210 | Msa1084800 | 0.833181 | 6.182054e-56 | -8.615850e-47 |
| Msa0896920 | Msa1084800 | 0.825098 | 5.642114e-54 | -8.615850e-47 |
| Msa0902340 | Msa1084800 | 0.815136 | 1.078756e-51 | -8.615850e-47 |
| Msa0910590 | Msa1084800 | 0.844355 | 7.960416e-59 | -8.615850e-47 |
| Msa0910830 | Msa1084800 | 0.824367 | 8.387391e-54 | -8.615850e-47 |
| Msa0913500 | Msa1084800 | 0.816425 | 5.566600e-52 | -8.615850e-47 |
| Msa0948430 | Msa1084800 | 0.845754 | 3.333943e-59 | -8.615850e-47 |
| Msa0950090 | Msa1084800 | 0.818333 | 2.070944e-52 | -8.615850e-47 |
| Msa0951060 | Msa1084800 | 0.815969 | 7.038670e-52 | -8.615850e-47 |
| Msa0960090 | Msa1084800 | 0.813187 | 2.905617e-51 | -8.615850e-47 |
| Msa0962290 | Msa1084800 | 0.805300 | 1.426895e-49 | -8.615850e-47 |
| Msa0963290 | Msa1084800 | 0.813045 | 3.121905e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084800 | MtrunA17_Chr7g0252501 | 83.721 | 86 | 14 | 0 | 1 | 86 | 24 | 109 | 5.06e-49 | 154 |
| Msa1084800 | MtrunA17_Chr3g0107871 | 73.256 | 86 | 21 | 1 | 3 | 86 | 139 | 224 | 1.11e-38 | 131 |
| Msa1084800 | MtrunA17_Chr7g0252361 | 55.294 | 85 | 37 | 1 | 3 | 86 | 160 | 244 | 6.08e-24 | 92.8 |
| Msa1084800 | MtrunA17_Chr6g0455071 | 48.052 | 77 | 38 | 1 | 12 | 86 | 45 | 121 | 2.33e-20 | 79.0 |
| Msa1084800 | MtrunA17_Chr3g0144871 | 50.000 | 74 | 35 | 1 | 12 | 83 | 171 | 244 | 1.84e-18 | 78.2 |
| Msa1084800 | MtrunA17_Chr8g0372671 | 46.512 | 86 | 40 | 1 | 11 | 90 | 164 | 249 | 1.29e-17 | 75.9 |
| Msa1084800 | MtrunA17_Chr4g0008111 | 50.000 | 76 | 32 | 1 | 15 | 84 | 168 | 243 | 1.71e-17 | 75.5 |
| Msa1084800 | MtrunA17_Chr6g0475241 | 48.193 | 83 | 37 | 1 | 10 | 86 | 164 | 246 | 3.25e-17 | 74.7 |
| Msa1084800 | MtrunA17_Chr6g0475221 | 45.882 | 85 | 39 | 2 | 4 | 86 | 158 | 237 | 8.23e-17 | 73.6 |
| Msa1084800 | MtrunA17_Chr1g0155481 | 39.796 | 98 | 52 | 2 | 2 | 92 | 8 | 105 | 1.17e-16 | 70.1 |
| Msa1084800 | MtrunA17_Chr1g0155451 | 38.542 | 96 | 47 | 2 | 3 | 86 | 9 | 104 | 6.50e-16 | 69.3 |
| Msa1084800 | MtrunA17_Chr5g0404631 | 43.333 | 90 | 40 | 2 | 3 | 86 | 172 | 256 | 2.39e-15 | 69.3 |
| Msa1084800 | MtrunA17_Chr8g0372821 | 44.737 | 76 | 36 | 1 | 15 | 84 | 168 | 243 | 1.99e-14 | 67.0 |
| Msa1084800 | MtrunA17_Chr3g0107591 | 43.750 | 80 | 39 | 1 | 11 | 84 | 163 | 242 | 6.80e-14 | 65.5 |
| Msa1084800 | MtrunA17_Chr8g0343971 | 42.353 | 85 | 42 | 1 | 15 | 92 | 168 | 252 | 9.52e-14 | 65.1 |
| Msa1084800 | MtrunA17_Chr5g0419851 | 42.857 | 77 | 38 | 1 | 14 | 90 | 233 | 303 | 4.51e-13 | 63.2 |
| Msa1084800 | MtrunA17_Chr8g0343981 | 43.529 | 85 | 41 | 1 | 15 | 92 | 168 | 252 | 5.32e-13 | 62.8 |
| Msa1084800 | MtrunA17_Chr8g0372801 | 41.791 | 67 | 39 | 0 | 10 | 76 | 104 | 170 | 1.01e-12 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084800 | AT5G66430.1 | 49.231 | 65 | 28 | 1 | 3 | 67 | 149 | 208 | 1.76e-15 | 70.1 |
| Msa1084800 | AT3G21950.2 | 39.130 | 92 | 45 | 2 | 3 | 88 | 156 | 242 | 2.21e-14 | 67.0 |
| Msa1084800 | AT5G04370.3 | 48.438 | 64 | 28 | 1 | 4 | 67 | 196 | 254 | 2.98e-14 | 66.6 |
| Msa1084800 | AT5G04370.1 | 47.692 | 65 | 29 | 1 | 3 | 67 | 190 | 249 | 5.54e-14 | 65.9 |
| Msa1084800 | AT3G11480.1 | 47.761 | 67 | 33 | 1 | 3 | 67 | 174 | 240 | 5.96e-14 | 65.9 |
| Msa1084800 | AT5G04370.2 | 47.692 | 65 | 29 | 1 | 3 | 67 | 209 | 268 | 6.81e-14 | 65.9 |
| Msa1084800 | AT3G21950.1 | 47.692 | 65 | 29 | 1 | 3 | 67 | 156 | 215 | 6.97e-14 | 65.9 |
| Msa1084800 | AT5G38020.2 | 50.943 | 53 | 26 | 0 | 15 | 67 | 124 | 176 | 2.94e-13 | 63.9 |
| Msa1084800 | AT5G38020.1 | 46.154 | 65 | 30 | 1 | 3 | 67 | 156 | 215 | 4.62e-13 | 63.5 |
| Msa1084800 | AT5G04380.2 | 45.312 | 64 | 30 | 1 | 4 | 67 | 116 | 174 | 2.76e-12 | 61.2 |
| Msa1084800 | AT5G04380.1 | 45.312 | 64 | 30 | 1 | 4 | 67 | 183 | 241 | 3.15e-12 | 61.2 |
| Msa1084800 | AT5G04380.3 | 45.312 | 64 | 30 | 1 | 4 | 67 | 187 | 245 | 4.66e-12 | 60.5 |
| Msa1084800 | AT1G19640.1 | 45.763 | 59 | 32 | 0 | 15 | 73 | 186 | 244 | 2.16e-11 | 58.5 |
Find 27 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTTGGCCAAACCTTTC+GGG | 0.134603 | 7_2:+85185239 | None:intergenic |
| GTTTAGTGGTTCTCCATTCT+TGG | 0.202312 | 7_2:+85185225 | None:intergenic |
| CCATTCTTGGCCAAACCTTT+CGG | 0.227156 | 7_2:+85185238 | None:intergenic |
| TAAATATTTCCCTTGTTTAG+TGG | 0.357448 | 7_2:+85185211 | None:intergenic |
| CAAATCTCATCATTACCTCT+TGG | 0.415227 | 7_2:+85184996 | None:intergenic |
| CATTTAGGCCCCGAAAGGTT+TGG | 0.417248 | 7_2:-85185248 | Msa1084800:intron |
| TTAAAATATGCTTCATAGAC+TGG | 0.421359 | 7_2:+85185166 | None:intergenic |
| CCGAAAGGTTTGGCCAAGAA+TGG | 0.461973 | 7_2:-85185238 | Msa1084800:CDS |
| TTCGAGGAATTAACAACTGA+TGG | 0.468183 | 7_2:-85185103 | Msa1084800:CDS |
| ATGATGGCATTAACATTTGT+TGG | 0.472815 | 7_2:-85185079 | Msa1084800:CDS |
| ATTAACAACTGATGGGATGA+TGG | 0.518595 | 7_2:-85185095 | Msa1084800:CDS |
| TTCTCAAGGGGTAATTGCCA+TGG | 0.534080 | 7_2:-85185035 | Msa1084800:CDS |
| TATGCTTCATAGACTGGTGG+AGG | 0.535027 | 7_2:+85185172 | None:intergenic |
| ATTCTTGGCCAAACCTTTCG+GGG | 0.560520 | 7_2:+85185240 | None:intergenic |
| AACTACCACTTCTTCTCAAG+GGG | 0.577750 | 7_2:-85185047 | Msa1084800:CDS |
| TGCCATGGTACTCAATGAGA+TGG | 0.578688 | 7_2:-85185020 | Msa1084800:CDS |
| ACAACTACCACTTCTTCTCA+AGG | 0.579517 | 7_2:-85185049 | Msa1084800:CDS |
| CAACTACCACTTCTTCTCAA+GGG | 0.581594 | 7_2:-85185048 | Msa1084800:CDS |
| TCGAGGAATTAACAACTGAT+GGG | 0.582747 | 7_2:-85185102 | Msa1084800:CDS |
| GAATGGAGAACCACTAAACA+AGG | 0.590677 | 7_2:-85185221 | Msa1084800:CDS |
| AATTACCCCTTGAGAAGAAG+TGG | 0.590678 | 7_2:+85185042 | None:intergenic |
| AAATATGCTTCATAGACTGG+TGG | 0.602942 | 7_2:+85185169 | None:intergenic |
| TGTGACATTTAGGCCCCGAA+AGG | 0.611420 | 7_2:-85185253 | Msa1084800:intron |
| ATGCTTCATAGACTGGTGGA+GGG | 0.673189 | 7_2:+85185173 | None:intergenic |
| GACCATCTCATTGAGTACCA+TGG | 0.681630 | 7_2:+85185018 | None:intergenic |
| ACTCAATGAGATGGTCCAAG+AGG | 0.686877 | 7_2:-85185011 | Msa1084800:CDS |
| AATGGAGAACCACTAAACAA+GGG | 0.694091 | 7_2:-85185220 | Msa1084800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTTCTTTGTGACATTT+AGG | - | chr7_2:85185175-85185194 | Msa1084800:CDS | 20.0% |
| !! | TAAATATTTCCCTTGTTTAG+TGG | + | chr7_2:85185230-85185249 | None:intergenic | 25.0% |
| ! | TTAAAATATGCTTCATAGAC+TGG | + | chr7_2:85185275-85185294 | None:intergenic | 25.0% |
| ATGATGGCATTAACATTTGT+TGG | - | chr7_2:85185359-85185378 | Msa1084800:intron | 30.0% | |
| AATGGAGAACCACTAAACAA+GGG | - | chr7_2:85185218-85185237 | Msa1084800:CDS | 35.0% | |
| AAATATGCTTCATAGACTGG+TGG | + | chr7_2:85185272-85185291 | None:intergenic | 35.0% | |
| !!! | TTTTCTAAAGTCACGTTTCG+AGG | - | chr7_2:85185319-85185338 | Msa1084800:intron | 35.0% |
| TTCGAGGAATTAACAACTGA+TGG | - | chr7_2:85185335-85185354 | Msa1084800:intron | 35.0% | |
| TCGAGGAATTAACAACTGAT+GGG | - | chr7_2:85185336-85185355 | Msa1084800:intron | 35.0% | |
| ATTAACAACTGATGGGATGA+TGG | - | chr7_2:85185343-85185362 | Msa1084800:intron | 35.0% | |
| CAAATCTCATCATTACCTCT+TGG | + | chr7_2:85185445-85185464 | None:intergenic | 35.0% | |
| GTTTAGTGGTTCTCCATTCT+TGG | + | chr7_2:85185216-85185235 | None:intergenic | 40.0% | |
| GAATGGAGAACCACTAAACA+AGG | - | chr7_2:85185217-85185236 | Msa1084800:CDS | 40.0% | |
| ACAACTACCACTTCTTCTCA+AGG | - | chr7_2:85185389-85185408 | Msa1084800:intron | 40.0% | |
| CAACTACCACTTCTTCTCAA+GGG | - | chr7_2:85185390-85185409 | Msa1084800:intron | 40.0% | |
| AACTACCACTTCTTCTCAAG+GGG | - | chr7_2:85185391-85185410 | Msa1084800:intron | 40.0% | |
| AATTACCCCTTGAGAAGAAG+TGG | + | chr7_2:85185399-85185418 | None:intergenic | 40.0% | |
| ATTCTTGGCCAAACCTTTCG+GGG | + | chr7_2:85185201-85185220 | None:intergenic | 45.0% | |
| CATTCTTGGCCAAACCTTTC+GGG | + | chr7_2:85185202-85185221 | None:intergenic | 45.0% | |
| CCATTCTTGGCCAAACCTTT+CGG | + | chr7_2:85185203-85185222 | None:intergenic | 45.0% | |
| ATGCTTCATAGACTGGTGGA+GGG | + | chr7_2:85185268-85185287 | None:intergenic | 45.0% | |
| TATGCTTCATAGACTGGTGG+AGG | + | chr7_2:85185269-85185288 | None:intergenic | 45.0% | |
| TTCTCAAGGGGTAATTGCCA+TGG | - | chr7_2:85185403-85185422 | Msa1084800:intron | 45.0% | |
| TGCCATGGTACTCAATGAGA+TGG | - | chr7_2:85185418-85185437 | Msa1084800:intron | 45.0% | |
| GACCATCTCATTGAGTACCA+TGG | + | chr7_2:85185423-85185442 | None:intergenic | 45.0% | |
| ACTCAATGAGATGGTCCAAG+AGG | - | chr7_2:85185427-85185446 | Msa1084800:intron | 45.0% | |
| TGTCAGCAACATAGCAGAGC+TGG | - | chr7_2:85185011-85185030 | Msa1084800:CDS | 50.0% | |
| GTCAGCAACATAGCAGAGCT+GGG | - | chr7_2:85185012-85185031 | Msa1084800:CDS | 50.0% | |
| TGTGACATTTAGGCCCCGAA+AGG | - | chr7_2:85185185-85185204 | Msa1084800:CDS | 50.0% | |
| CATTTAGGCCCCGAAAGGTT+TGG | - | chr7_2:85185190-85185209 | Msa1084800:CDS | 50.0% | |
| CCGAAAGGTTTGGCCAAGAA+TGG | - | chr7_2:85185200-85185219 | Msa1084800:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 85184985 | 85185475 | 85184985 | ID=Msa1084800;Name=Msa1084800 |
| chr7_2 | mRNA | 85184985 | 85185475 | 85184985 | ID=Msa1084800-mRNA-1;Parent=Msa1084800;Name=Msa1084800-mRNA-1;_AED=0.49;_eAED=0.49;_QI=0|0|0|0.5|1|1|2|0|94 |
| chr7_2 | exon | 85185470 | 85185475 | 85185470 | ID=Msa1084800-mRNA-1:exon:23022;Parent=Msa1084800-mRNA-1 |
| chr7_2 | exon | 85184985 | 85185263 | 85184985 | ID=Msa1084800-mRNA-1:exon:23021;Parent=Msa1084800-mRNA-1 |
| chr7_2 | CDS | 85185470 | 85185475 | 85185470 | ID=Msa1084800-mRNA-1:cds;Parent=Msa1084800-mRNA-1 |
| chr7_2 | CDS | 85184985 | 85185263 | 85184985 | ID=Msa1084800-mRNA-1:cds;Parent=Msa1084800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
