Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646260 | XP_013456377.1 | 91.346 | 104 | 9 | 0 | 1 | 104 | 1 | 104 | 2.02e-64 | 200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646260 | sp|Q8W453|DIRL1_ARATH | 41.558 | 77 | 42 | 1 | 28 | 104 | 29 | 102 | 5.92e-13 | 62.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0646260 | 0.858659 | 7.077705e-63 | -8.615850e-47 |
| Msa0006840 | Msa0646260 | 0.814653 | 1.381107e-51 | -8.615850e-47 |
| Msa0013270 | Msa0646260 | 0.802197 | 6.288503e-49 | -8.615850e-47 |
| Msa0032130 | Msa0646260 | 0.806531 | 7.864358e-50 | -8.615850e-47 |
| Msa0032390 | Msa0646260 | 0.805549 | 1.265259e-49 | -8.615850e-47 |
| Msa0043840 | Msa0646260 | 0.813060 | 3.098963e-51 | -8.615850e-47 |
| Msa0045620 | Msa0646260 | 0.819111 | 1.378368e-52 | -8.615850e-47 |
| Msa0050530 | Msa0646260 | 0.830363 | 3.063324e-55 | -8.615850e-47 |
| Msa0057860 | Msa0646260 | 0.847045 | 1.482382e-59 | -8.615850e-47 |
| Msa0073270 | Msa0646260 | 0.840065 | 1.088479e-57 | -8.615850e-47 |
| Msa0075840 | Msa0646260 | 0.817935 | 2.547607e-52 | -8.615850e-47 |
| Msa0089540 | Msa0646260 | 0.805074 | 1.590962e-49 | -8.615850e-47 |
| Msa0090500 | Msa0646260 | 0.816405 | 5.624008e-52 | -8.615850e-47 |
| Msa0092350 | Msa0646260 | 0.804016 | 2.644987e-49 | -8.615850e-47 |
| Msa0100600 | Msa0646260 | 0.837135 | 6.213500e-57 | -8.615850e-47 |
| Msa0100890 | Msa0646260 | 0.841758 | 3.912128e-58 | -8.615850e-47 |
| Msa0102920 | Msa0646260 | 0.861862 | 7.614597e-64 | -8.615850e-47 |
| Msa0605350 | Msa0646260 | 0.962494 | 6.052065e-121 | -8.615850e-47 |
| Msa0605520 | Msa0646260 | 0.833339 | 5.646106e-56 | -8.615850e-47 |
| Msa0612880 | Msa0646260 | -0.801272 | 9.737333e-49 | -8.615850e-47 |
| Msa0623310 | Msa0646260 | 0.817995 | 2.469589e-52 | -8.615850e-47 |
| Msa0623980 | Msa0646260 | 0.823764 | 1.161899e-53 | -8.615850e-47 |
| Msa0626980 | Msa0646260 | 0.824851 | 6.450454e-54 | -8.615850e-47 |
| Msa0627360 | Msa0646260 | 0.826767 | 2.263770e-54 | -8.615850e-47 |
| Msa0630440 | Msa0646260 | 0.813325 | 2.709734e-51 | -8.615850e-47 |
| Msa0646260 | Msa0658120 | 0.804516 | 2.080785e-49 | -8.615850e-47 |
| Msa0646260 | Msa0663290 | 0.805305 | 1.423577e-49 | -8.615850e-47 |
| Msa0646260 | Msa0664070 | 0.801415 | 9.100828e-49 | -8.615850e-47 |
| Msa0646260 | Msa0673940 | 0.861946 | 7.173687e-64 | -8.615850e-47 |
| Msa0646260 | Msa0676200 | 0.827391 | 1.605893e-54 | -8.615850e-47 |
| Msa0646260 | Msa0685610 | 0.837788 | 4.226477e-57 | -8.615850e-47 |
| Msa0646260 | Msa0689830 | 0.827123 | 1.861037e-54 | -8.615850e-47 |
| Msa0646260 | Msa0702970 | 0.805207 | 1.492394e-49 | -8.615850e-47 |
| Msa0646260 | Msa0751720 | 0.853334 | 2.560324e-61 | -8.615850e-47 |
| Msa0646260 | Msa0761830 | 0.844069 | 9.495061e-59 | -8.615850e-47 |
| Msa0646260 | Msa0774060 | 0.803406 | 3.540302e-49 | -8.615850e-47 |
| Msa0646260 | Msa0810080 | 0.800199 | 1.612329e-48 | -8.615850e-47 |
| Msa0646260 | Msa0827420 | 0.808627 | 2.822263e-50 | -8.615850e-47 |
| Msa0646260 | Msa0831820 | 0.843402 | 1.432523e-58 | -8.615850e-47 |
| Msa0646260 | Msa0842180 | 0.818525 | 1.873315e-52 | -8.615850e-47 |
| Msa0646260 | Msa0850600 | 0.801188 | 1.013148e-48 | -8.615850e-47 |
| Msa0646260 | Msa0870020 | 0.812393 | 4.337215e-51 | -8.615850e-47 |
| Msa0646260 | Msa0871420 | 0.818933 | 1.513064e-52 | -8.615850e-47 |
| Msa0646260 | Msa0876630 | 0.817549 | 3.112988e-52 | -8.615850e-47 |
| Msa0646260 | Msa0900830 | 0.845951 | 2.947002e-59 | -8.615850e-47 |
| Msa0646260 | Msa0929900 | 0.819174 | 1.333811e-52 | -8.615850e-47 |
| Msa0646260 | Msa0931370 | 0.824213 | 9.116564e-54 | -8.615850e-47 |
| Msa0646260 | Msa0936630 | 0.810880 | 9.247785e-51 | -8.615850e-47 |
| Msa0646260 | Msa0965800 | 0.825254 | 5.182193e-54 | -8.615850e-47 |
| Msa0646260 | Msa0970040 | 0.830494 | 2.845107e-55 | -8.615850e-47 |
| Msa0646260 | Msa0970100 | 0.819956 | 8.844486e-53 | -8.615850e-47 |
| Msa0646260 | Msa0987670 | 0.805885 | 1.075625e-49 | -8.615850e-47 |
| Msa0646260 | Msa1011360 | 0.804465 | 2.132244e-49 | -8.615850e-47 |
| Msa0646260 | Msa1021560 | 0.851329 | 9.528403e-61 | -8.615850e-47 |
| Msa0646260 | Msa1026710 | 0.836695 | 8.050688e-57 | -8.615850e-47 |
| Msa0646260 | Msa1038860 | 0.811515 | 6.734813e-51 | -8.615850e-47 |
| Msa0646260 | Msa1057620 | -0.812555 | 3.997256e-51 | -8.615850e-47 |
| Msa0646260 | Msa1060300 | 0.823186 | 1.586069e-53 | -8.615850e-47 |
| Msa0646260 | Msa1085560 | 0.808552 | 2.927641e-50 | -8.615850e-47 |
| Msa0646260 | Msa1085680 | 0.862519 | 4.784437e-64 | -8.615850e-47 |
| Msa0646260 | Msa1105540 | 0.825853 | 3.736857e-54 | -8.615850e-47 |
| Msa0646260 | Msa1105580 | 0.825923 | 3.596166e-54 | -8.615850e-47 |
| Msa0646260 | Msa1124210 | 0.808525 | 2.968172e-50 | -8.615850e-47 |
| Msa0646260 | Msa1130770 | 0.815476 | 9.068619e-52 | -8.615850e-47 |
| Msa0646260 | Msa1144990 | 0.838390 | 2.958130e-57 | -8.615850e-47 |
| Msa0646260 | Msa1148930 | 0.837963 | 3.811888e-57 | -8.615850e-47 |
| Msa0646260 | Msa1154630 | 0.820222 | 7.686161e-53 | -8.615850e-47 |
| Msa0646260 | Msa1162360 | 0.816983 | 4.173089e-52 | -8.615850e-47 |
| Msa0646260 | Msa1192360 | 0.804451 | 2.146740e-49 | -8.615850e-47 |
| Msa0646260 | Msa1197720 | 0.804880 | 1.746404e-49 | -8.615850e-47 |
| Msa0646260 | Msa1200360 | 0.801110 | 1.051020e-48 | -8.615850e-47 |
| Msa0646260 | Msa1206040 | 0.802823 | 4.672682e-49 | -8.615850e-47 |
| Msa0646260 | Msa1217890 | 0.830756 | 2.455495e-55 | -8.615850e-47 |
| Msa0646260 | Msa1220580 | 0.816346 | 5.797381e-52 | -8.615850e-47 |
| Msa0646260 | Msa1220720 | 0.816796 | 4.598281e-52 | -8.615850e-47 |
| Msa0646260 | Msa1231440 | 0.814957 | 1.182071e-51 | -8.615850e-47 |
| Msa0646260 | Msa1255710 | 0.829286 | 5.605364e-55 | -8.615850e-47 |
| Msa0646260 | Msa1265570 | 0.822295 | 2.556723e-53 | -8.615850e-47 |
| Msa0646260 | Msa1278000 | 0.808497 | 3.008765e-50 | -8.615850e-47 |
| Msa0646260 | Msa1278030 | 0.813600 | 2.358385e-51 | -8.615850e-47 |
| Msa0646260 | Msa1288970 | -0.803473 | 3.428773e-49 | -8.615850e-47 |
| Msa0646260 | Msa1296860 | 0.809620 | 1.729624e-50 | -8.615850e-47 |
| Msa0646260 | Msa1315500 | 0.805683 | 1.185614e-49 | -8.615850e-47 |
| Msa0646260 | Msa1328280 | 0.801548 | 8.549284e-49 | -8.615850e-47 |
| Msa0646260 | Msa1328870 | 0.802076 | 6.659583e-49 | -8.615850e-47 |
| Msa0646260 | Msa1334560 | 0.812195 | 4.791387e-51 | -8.615850e-47 |
| Msa0646260 | Msa1334670 | 0.823480 | 1.354334e-53 | -8.615850e-47 |
| Msa0646260 | Msa1347610 | 0.808828 | 2.556635e-50 | -8.615850e-47 |
| Msa0646260 | Msa1352580 | 0.824425 | 8.128332e-54 | -8.615850e-47 |
| Msa0646260 | Msa1356450 | 0.804142 | 2.489238e-49 | -8.615850e-47 |
| Msa0646260 | Msa1362590 | 0.814445 | 1.535282e-51 | -8.615850e-47 |
| Msa0646260 | Msa1365230 | 0.826471 | 2.663907e-54 | -8.615850e-47 |
| Msa0646260 | Msa1370270 | -0.802807 | 4.707103e-49 | -8.615850e-47 |
| Msa0646260 | Msa1371800 | 0.820703 | 5.963708e-53 | -8.615850e-47 |
| Msa0646260 | Msa1372030 | 0.843840 | 1.094133e-58 | -8.615850e-47 |
| Msa0646260 | Msa1376310 | 0.817537 | 3.131991e-52 | -8.615850e-47 |
| Msa0646260 | Msa1379940 | 0.825223 | 5.270398e-54 | -8.615850e-47 |
| Msa0646260 | Msa1385570 | 0.806772 | 6.994027e-50 | -8.615850e-47 |
| Msa0646260 | Msa1389820 | 0.822511 | 2.277588e-53 | -8.615850e-47 |
| Msa0646260 | Msa1398490 | 0.810564 | 1.082541e-50 | -8.615850e-47 |
| Msa0646260 | Msa1413020 | 0.805017 | 1.635613e-49 | -8.615850e-47 |
| Msa0646260 | Msa1420830 | 0.840573 | 8.014437e-58 | -8.615850e-47 |
| Msa0646260 | Msa1434700 | 0.810549 | 1.090507e-50 | -8.615850e-47 |
| Msa0646260 | Msa1438510 | 0.850685 | 1.447477e-60 | -8.615850e-47 |
| Msa0646260 | Msa1447900 | 0.812866 | 3.416798e-51 | -8.615850e-47 |
| Msa0646260 | Msa1462780 | 0.839750 | 1.314571e-57 | -8.615850e-47 |
| Msa0121470 | Msa0646260 | 0.813716 | 2.222937e-51 | -8.615850e-47 |
| Msa0121490 | Msa0646260 | 0.814638 | 1.391066e-51 | -8.615850e-47 |
| Msa0128340 | Msa0646260 | 0.804035 | 2.620747e-49 | -8.615850e-47 |
| Msa0128740 | Msa0646260 | 0.803685 | 3.098826e-49 | -8.615850e-47 |
| Msa0137970 | Msa0646260 | 0.806009 | 1.012818e-49 | -8.615850e-47 |
| Msa0147680 | Msa0646260 | 0.862613 | 4.477126e-64 | -8.615850e-47 |
| Msa0164170 | Msa0646260 | 0.815719 | 8.005440e-52 | -8.615850e-47 |
| Msa0168380 | Msa0646260 | 0.833324 | 5.693055e-56 | -8.615850e-47 |
| Msa0172590 | Msa0646260 | 0.808778 | 2.619839e-50 | -8.615850e-47 |
| Msa0183920 | Msa0646260 | 0.804928 | 1.707048e-49 | -8.615850e-47 |
| Msa0185690 | Msa0646260 | 0.818923 | 1.521418e-52 | -8.615850e-47 |
| Msa0204970 | Msa0646260 | 0.807447 | 5.032306e-50 | -8.615850e-47 |
| Msa0206370 | Msa0646260 | 0.826310 | 2.910489e-54 | -8.615850e-47 |
| Msa0210790 | Msa0646260 | 0.804201 | 2.420505e-49 | -8.615850e-47 |
| Msa0210850 | Msa0646260 | 0.807232 | 5.589201e-50 | -8.615850e-47 |
| Msa0219840 | Msa0646260 | 0.820532 | 6.527099e-53 | -8.615850e-47 |
| Msa0221460 | Msa0646260 | -0.817165 | 3.799441e-52 | -8.615850e-47 |
| Msa0235080 | Msa0646260 | 0.800383 | 1.479010e-48 | -8.615850e-47 |
| Msa0368630 | Msa0646260 | 0.804542 | 2.055401e-49 | -8.615850e-47 |
| Msa0372100 | Msa0646260 | 0.835098 | 2.045233e-56 | -8.615850e-47 |
| Msa0416210 | Msa0646260 | 0.831205 | 1.904290e-55 | -8.615850e-47 |
| Msa0433630 | Msa0646260 | 0.834808 | 2.419376e-56 | -8.615850e-47 |
| Msa0477480 | Msa0646260 | 0.804479 | 2.117985e-49 | -8.615850e-47 |
| Msa0480270 | Msa0646260 | 0.803330 | 3.670608e-49 | -8.615850e-47 |
| Msa0240590 | Msa0646260 | -0.808762 | 2.640691e-50 | -8.615850e-47 |
| Msa0244820 | Msa0646260 | -0.820875 | 5.442474e-53 | -8.615850e-47 |
| Msa0260980 | Msa0646260 | 0.846367 | 2.270835e-59 | -8.615850e-47 |
| Msa0288400 | Msa0646260 | 0.800797 | 1.217559e-48 | -8.615850e-47 |
| Msa0300670 | Msa0646260 | -0.824991 | 5.978615e-54 | -8.615850e-47 |
| Msa0316000 | Msa0646260 | 0.806662 | 7.375844e-50 | -8.615850e-47 |
| Msa0336430 | Msa0646260 | 0.849041 | 4.170034e-60 | -8.615850e-47 |
| Msa0336460 | Msa0646260 | 0.819083 | 1.398779e-52 | -8.615850e-47 |
| Msa0336520 | Msa0646260 | 0.848940 | 4.449320e-60 | -8.615850e-47 |
| Msa0337760 | Msa0646260 | -0.818832 | 1.595229e-52 | -8.615850e-47 |
| Msa0342220 | Msa0646260 | 0.801055 | 1.078654e-48 | -8.615850e-47 |
| Msa0515760 | Msa0646260 | 0.803600 | 3.225828e-49 | -8.615850e-47 |
| Msa0521510 | Msa0646260 | 0.833244 | 5.960109e-56 | -8.615850e-47 |
| Msa0521530 | Msa0646260 | 0.819994 | 8.671494e-53 | -8.615850e-47 |
| Msa0528310 | Msa0646260 | 0.812541 | 4.024943e-51 | -8.615850e-47 |
| Msa0530660 | Msa0646260 | 0.826848 | 2.166226e-54 | -8.615850e-47 |
| Msa0541880 | Msa0646260 | 0.838102 | 3.510797e-57 | -8.615850e-47 |
| Msa0541940 | Msa0646260 | 0.831732 | 1.412484e-55 | -8.615850e-47 |
| Msa0549870 | Msa0646260 | 0.963332 | 5.893324e-122 | -8.615850e-47 |
| Msa0566460 | Msa0646260 | 0.829948 | 3.868559e-55 | -8.615850e-47 |
| Msa0568460 | Msa0646260 | -0.807373 | 5.217175e-50 | -8.615850e-47 |
| Msa0571350 | Msa0646260 | 0.811121 | 8.203963e-51 | -8.615850e-47 |
| Msa0572360 | Msa0646260 | 0.814432 | 1.545276e-51 | -8.615850e-47 |
| Msa0572830 | Msa0646260 | 0.800348 | 1.503400e-48 | -8.615850e-47 |
| Msa0574660 | Msa0646260 | 0.821108 | 4.812125e-53 | -8.615850e-47 |
| Msa0575950 | Msa0646260 | 0.825388 | 4.817578e-54 | -8.615850e-47 |
| Msa0576330 | Msa0646260 | 0.859666 | 3.530977e-63 | -8.615850e-47 |
| Msa0584970 | Msa0646260 | 0.845213 | 4.673487e-59 | -8.615850e-47 |
| Msa0587180 | Msa0646260 | 0.854113 | 1.527646e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646260 | MtrunA17_Chr4g0034581 | 91.346 | 104 | 9 | 0 | 1 | 104 | 1 | 104 | 1.86e-68 | 200 |
| Msa0646260 | MtrunA17_Chr4g0034531 | 73.077 | 104 | 28 | 0 | 1 | 104 | 1 | 104 | 1.13e-52 | 160 |
| Msa0646260 | MtrunA17_Chr4g0034561 | 55.238 | 105 | 45 | 2 | 1 | 104 | 1 | 104 | 2.01e-37 | 122 |
| Msa0646260 | MtrunA17_Chr4g0034571 | 42.857 | 105 | 52 | 2 | 1 | 105 | 1 | 97 | 2.66e-21 | 84.0 |
| Msa0646260 | MtrunA17_Chr7g0234401 | 41.748 | 103 | 57 | 1 | 2 | 104 | 5 | 104 | 8.68e-21 | 79.7 |
| Msa0646260 | MtrunA17_Chr5g0445131 | 33.654 | 104 | 60 | 4 | 2 | 104 | 7 | 102 | 1.83e-11 | 55.8 |
| Msa0646260 | MtrunA17_Chr3g0100281 | 36.667 | 90 | 49 | 3 | 7 | 96 | 14 | 95 | 4.49e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646260 | AT5G48490.1 | 36.634 | 101 | 60 | 2 | 5 | 104 | 4 | 101 | 4.02e-14 | 63.2 |
| Msa0646260 | AT5G48485.1 | 41.558 | 77 | 42 | 1 | 28 | 104 | 29 | 102 | 6.02e-14 | 62.8 |
Find 31 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGGTTGCTTTCTTTCTA+TGG | 0.215569 | 4_3:-51902328 | Msa0646260:CDS |
| CTATGTCGTTATAAGGATTC+AGG | 0.249484 | 4_3:-51902346 | Msa0646260:CDS |
| TCCTGTTAACTGTAAGCTTA+TGG | 0.254280 | 4_3:-51902278 | Msa0646260:CDS |
| TCAATGCCTATGTCGTTATA+AGG | 0.293667 | 4_3:-51902353 | Msa0646260:CDS |
| TCCATAAGCTTACAGTTAAC+AGG | 0.370185 | 4_3:+51902277 | None:intergenic |
| AATACCATGATGTTGGTTAA+TGG | 0.374528 | 4_3:-51902502 | Msa0646260:CDS |
| AGTGGTGACAATTCTGTTAA+TGG | 0.378651 | 4_3:-51902424 | Msa0646260:CDS |
| GGAAGTTCCATGGCTTGGTT+AGG | 0.427875 | 4_3:+51902298 | None:intergenic |
| TAGGCATTGAAGATCGGCTT+TGG | 0.464541 | 4_3:+51902366 | None:intergenic |
| ATTAACCAACATCATGGTAT+TGG | 0.470830 | 4_3:+51902504 | None:intergenic |
| TAACAGGAAGTTCCATGGCT+TGG | 0.486774 | 4_3:+51902293 | None:intergenic |
| TATGATTGTGGCGATGTTGT+TGG | 0.507427 | 4_3:-51902533 | Msa0646260:CDS |
| TATGTCGTTATAAGGATTCA+GGG | 0.530226 | 4_3:-51902345 | Msa0646260:CDS |
| CTGAATCCTTATAACGACAT+AGG | 0.550946 | 4_3:+51902347 | None:intergenic |
| AGAGATGGAGGCATACAAGC+AGG | 0.551353 | 4_3:-51902557 | None:intergenic |
| AACAAGGACTGAAGGCATGC+GGG | 0.556452 | 4_3:-51902456 | Msa0646260:CDS |
| GCCGTCTGATGCTTGCTGCT+CGG | 0.561297 | 4_3:-51902395 | Msa0646260:CDS |
| ACAGTTAACAGGAAGTTCCA+TGG | 0.568806 | 4_3:+51902288 | None:intergenic |
| CTGACCATTAACCAACATCA+TGG | 0.570185 | 4_3:+51902498 | None:intergenic |
| GCCGAGCAGCAAGCATCAGA+CGG | 0.582886 | 4_3:+51902394 | None:intergenic |
| ACGACATAGGCATTGAAGAT+CGG | 0.583458 | 4_3:+51902360 | None:intergenic |
| GAATTGTCACCACTCACATA+CGG | 0.587779 | 4_3:+51902433 | None:intergenic |
| CATGACAAAACAAGGACTGA+AGG | 0.588836 | 4_3:-51902464 | Msa0646260:CDS |
| ATACAAGCAGGTTATGATTG+TGG | 0.602790 | 4_3:-51902545 | Msa0646260:CDS |
| CAACATCATGGTATTGGCAA+TGG | 0.605291 | 4_3:+51902510 | None:intergenic |
| CATTGCCAATACCATGATGT+TGG | 0.609484 | 4_3:-51902509 | Msa0646260:CDS |
| TTATGTCACATGACAAAACA+AGG | 0.627195 | 4_3:-51902472 | Msa0646260:CDS |
| AAACAAGGACTGAAGGCATG+CGG | 0.631589 | 4_3:-51902457 | Msa0646260:CDS |
| TATTGATCCTAACCAAGCCA+TGG | 0.632800 | 4_3:-51902305 | Msa0646260:CDS |
| AACCACATGACTAGTAGCAG+TGG | 0.639755 | 4_3:+51902248 | None:intergenic |
| GCATGCGGGCCGTATGTGAG+TGG | 0.668512 | 4_3:-51902442 | Msa0646260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATTAACCAACATCATGGTAT+TGG | + | chr4_3:51902310-51902329 | None:intergenic | 30.0% | |
| ! | AATACCATGATGTTGGTTAA+TGG | - | chr4_3:51902309-51902328 | Msa0646260:CDS | 30.0% |
| TTATGTCACATGACAAAACA+AGG | - | chr4_3:51902339-51902358 | Msa0646260:CDS | 30.0% | |
| TATGTCGTTATAAGGATTCA+GGG | - | chr4_3:51902466-51902485 | Msa0646260:CDS | 30.0% | |
| ATACAAGCAGGTTATGATTG+TGG | - | chr4_3:51902266-51902285 | Msa0646260:CDS | 35.0% | |
| AGTGGTGACAATTCTGTTAA+TGG | - | chr4_3:51902387-51902406 | Msa0646260:CDS | 35.0% | |
| TCAATGCCTATGTCGTTATA+AGG | - | chr4_3:51902458-51902477 | Msa0646260:CDS | 35.0% | |
| CTGAATCCTTATAACGACAT+AGG | + | chr4_3:51902467-51902486 | None:intergenic | 35.0% | |
| CTATGTCGTTATAAGGATTC+AGG | - | chr4_3:51902465-51902484 | Msa0646260:CDS | 35.0% | |
| TCCTGTTAACTGTAAGCTTA+TGG | - | chr4_3:51902533-51902552 | Msa0646260:CDS | 35.0% | |
| TCCATAAGCTTACAGTTAAC+AGG | + | chr4_3:51902537-51902556 | None:intergenic | 35.0% | |
| TATGATTGTGGCGATGTTGT+TGG | - | chr4_3:51902278-51902297 | Msa0646260:CDS | 40.0% | |
| !! | CAACATCATGGTATTGGCAA+TGG | + | chr4_3:51902304-51902323 | None:intergenic | 40.0% |
| CATTGCCAATACCATGATGT+TGG | - | chr4_3:51902302-51902321 | Msa0646260:CDS | 40.0% | |
| CTGACCATTAACCAACATCA+TGG | + | chr4_3:51902316-51902335 | None:intergenic | 40.0% | |
| CATGACAAAACAAGGACTGA+AGG | - | chr4_3:51902347-51902366 | Msa0646260:CDS | 40.0% | |
| GAATTGTCACCACTCACATA+CGG | + | chr4_3:51902381-51902400 | None:intergenic | 40.0% | |
| !! | ACGACATAGGCATTGAAGAT+CGG | + | chr4_3:51902454-51902473 | None:intergenic | 40.0% |
| ! | TCAGGGTTGCTTTCTTTCTA+TGG | - | chr4_3:51902483-51902502 | Msa0646260:CDS | 40.0% |
| TATTGATCCTAACCAAGCCA+TGG | - | chr4_3:51902506-51902525 | Msa0646260:CDS | 40.0% | |
| ACAGTTAACAGGAAGTTCCA+TGG | + | chr4_3:51902526-51902545 | None:intergenic | 40.0% | |
| ! | AAACAAGGACTGAAGGCATG+CGG | - | chr4_3:51902354-51902373 | Msa0646260:CDS | 45.0% |
| !! | TAGGCATTGAAGATCGGCTT+TGG | + | chr4_3:51902448-51902467 | None:intergenic | 45.0% |
| TAACAGGAAGTTCCATGGCT+TGG | + | chr4_3:51902521-51902540 | None:intergenic | 45.0% | |
| ! | AACAAGGACTGAAGGCATGC+GGG | - | chr4_3:51902355-51902374 | Msa0646260:CDS | 50.0% |
| !! | GGAAGTTCCATGGCTTGGTT+AGG | + | chr4_3:51902516-51902535 | None:intergenic | 50.0% |
| ! | GCCGTCTGATGCTTGCTGCT+CGG | - | chr4_3:51902416-51902435 | Msa0646260:CDS | 60.0% |
| GCCGAGCAGCAAGCATCAGA+CGG | + | chr4_3:51902420-51902439 | None:intergenic | 60.0% | |
| GCATGCGGGCCGTATGTGAG+TGG | - | chr4_3:51902369-51902388 | Msa0646260:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 51902258 | 51902575 | 51902258 | ID=Msa0646260;Name=Msa0646260 |
| chr4_3 | mRNA | 51902258 | 51902575 | 51902258 | ID=Msa0646260-mRNA-1;Parent=Msa0646260;Name=Msa0646260-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|105 |
| chr4_3 | exon | 51902258 | 51902575 | 51902258 | ID=Msa0646260-mRNA-1:exon:12651;Parent=Msa0646260-mRNA-1 |
| chr4_3 | CDS | 51902258 | 51902575 | 51902258 | ID=Msa0646260-mRNA-1:cds;Parent=Msa0646260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
