Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358550 | XP_013462202.1 | 97.387 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 0.0 | 848 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358550 | sp|Q8RWB7|PMT12_ARATH | 33.835 | 399 | 232 | 7 | 24 | 419 | 7 | 376 | 2.65e-70 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358550 | A0A072V314 | 97.387 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 0.0 | 848 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005710 | Msa1358550 | 0.813499 | 2.481346e-51 | -8.615850e-47 |
| Msa0008830 | Msa1358550 | 0.812210 | 4.753298e-51 | -8.615850e-47 |
| Msa0014920 | Msa1358550 | 0.822185 | 2.711936e-53 | -8.615850e-47 |
| Msa0016670 | Msa1358550 | 0.801526 | 8.639091e-49 | -8.615850e-47 |
| Msa0024680 | Msa1358550 | 0.834114 | 3.614679e-56 | -8.615850e-47 |
| Msa0027540 | Msa1358550 | 0.834278 | 3.287610e-56 | -8.615850e-47 |
| Msa0028060 | Msa1358550 | 0.801759 | 7.738921e-49 | -8.615850e-47 |
| Msa0030000 | Msa1358550 | 0.809940 | 1.476022e-50 | -8.615850e-47 |
| Msa0030730 | Msa1358550 | 0.819484 | 1.133472e-52 | -8.615850e-47 |
| Msa0032120 | Msa1358550 | 0.858870 | 6.120998e-63 | -8.615850e-47 |
| Msa0032400 | Msa1358550 | 0.831120 | 1.998895e-55 | -8.615850e-47 |
| Msa0032840 | Msa1358550 | -0.836049 | 1.174998e-56 | -8.615850e-47 |
| Msa0044020 | Msa1358550 | 0.803978 | 2.693331e-49 | -8.615850e-47 |
| Msa0046750 | Msa1358550 | 0.836886 | 7.194807e-57 | -8.615850e-47 |
| Msa0048020 | Msa1358550 | 0.814631 | 1.396207e-51 | -8.615850e-47 |
| Msa0050430 | Msa1358550 | 0.811846 | 5.707206e-51 | -8.615850e-47 |
| Msa0053110 | Msa1358550 | 0.817894 | 2.601642e-52 | -8.615850e-47 |
| Msa0063580 | Msa1358550 | 0.813266 | 2.792675e-51 | -8.615850e-47 |
| Msa0072810 | Msa1358550 | 0.816573 | 5.157631e-52 | -8.615850e-47 |
| Msa0073820 | Msa1358550 | 0.808802 | 2.589089e-50 | -8.615850e-47 |
| Msa0075310 | Msa1358550 | 0.820622 | 6.221941e-53 | -8.615850e-47 |
| Msa0091770 | Msa1358550 | 0.814173 | 1.763077e-51 | -8.615850e-47 |
| Msa0103000 | Msa1358550 | 0.809652 | 1.702559e-50 | -8.615850e-47 |
| Msa0105420 | Msa1358550 | 0.825448 | 4.661133e-54 | -8.615850e-47 |
| Msa0109950 | Msa1358550 | 0.805017 | 1.634925e-49 | -8.615850e-47 |
| Msa0110360 | Msa1358550 | 0.802276 | 6.056642e-49 | -8.615850e-47 |
| Msa0110970 | Msa1358550 | 0.812595 | 3.917601e-51 | -8.615850e-47 |
| Msa0114540 | Msa1358550 | -0.812125 | 4.962713e-51 | -8.615850e-47 |
| Msa0120330 | Msa1358550 | 0.848389 | 6.323444e-60 | -8.615850e-47 |
| Msa1354040 | Msa1358550 | 0.808528 | 2.963284e-50 | -8.615850e-47 |
| Msa1358550 | Msa1373510 | 0.826465 | 2.672421e-54 | -8.615850e-47 |
| Msa1358550 | Msa1379990 | 0.801481 | 8.822981e-49 | -8.615850e-47 |
| Msa1358550 | Msa1382310 | 0.822849 | 1.900622e-53 | -8.615850e-47 |
| Msa1358550 | Msa1382720 | 0.815263 | 1.011264e-51 | -8.615850e-47 |
| Msa1358550 | Msa1385900 | 0.811847 | 5.705118e-51 | -8.615850e-47 |
| Msa1358550 | Msa1388820 | 0.810633 | 1.046309e-50 | -8.615850e-47 |
| Msa1358550 | Msa1390310 | 0.818974 | 1.481344e-52 | -8.615850e-47 |
| Msa1358550 | Msa1398480 | 0.845819 | 3.200956e-59 | -8.615850e-47 |
| Msa1358550 | Msa1420060 | 0.800365 | 1.491107e-48 | -8.615850e-47 |
| Msa1358550 | Msa1431000 | 0.807151 | 5.813933e-50 | -8.615850e-47 |
| Msa1358550 | Msa1447230 | 0.818504 | 1.893486e-52 | -8.615850e-47 |
| Msa1358550 | Msa1449880 | 0.801398 | 9.177064e-49 | -8.615850e-47 |
| Msa1358550 | Msa1463970 | 0.812219 | 4.733665e-51 | -8.615850e-47 |
| Msa1358550 | Msa1464730 | 0.800035 | 1.740744e-48 | -8.615850e-47 |
| Msa1358550 | Msa1466990 | 0.812192 | 4.796542e-51 | -8.615850e-47 |
| Msa0604360 | Msa1358550 | 0.809996 | 1.435289e-50 | -8.615850e-47 |
| Msa0619330 | Msa1358550 | 0.804054 | 2.597327e-49 | -8.615850e-47 |
| Msa0621120 | Msa1358550 | 0.808300 | 3.314440e-50 | -8.615850e-47 |
| Msa0642650 | Msa1358550 | 0.824142 | 9.474813e-54 | -8.615850e-47 |
| Msa0670980 | Msa1358550 | 0.810975 | 8.823556e-51 | -8.615850e-47 |
| Msa0678860 | Msa1358550 | 0.806431 | 8.252707e-50 | -8.615850e-47 |
| Msa0681890 | Msa1358550 | 0.833011 | 6.814583e-56 | -8.615850e-47 |
| Msa0693570 | Msa1358550 | 0.811586 | 6.499804e-51 | -8.615850e-47 |
| Msa0696620 | Msa1358550 | 0.808488 | 3.021976e-50 | -8.615850e-47 |
| Msa0703760 | Msa1358550 | 0.806481 | 8.055236e-50 | -8.615850e-47 |
| Msa0707780 | Msa1358550 | 0.811803 | 5.830257e-51 | -8.615850e-47 |
| Msa0730180 | Msa1358550 | 0.820312 | 7.330799e-53 | -8.615850e-47 |
| Msa0746600 | Msa1358550 | 0.804061 | 2.587818e-49 | -8.615850e-47 |
| Msa0746610 | Msa1358550 | 0.805750 | 1.148348e-49 | -8.615850e-47 |
| Msa0747780 | Msa1358550 | 0.805686 | 1.184419e-49 | -8.615850e-47 |
| Msa0770430 | Msa1358550 | 0.806094 | 9.719499e-50 | -8.615850e-47 |
| Msa0810020 | Msa1358550 | 0.812602 | 3.902705e-51 | -8.615850e-47 |
| Msa0820670 | Msa1358550 | 0.802416 | 5.669162e-49 | -8.615850e-47 |
| Msa0825020 | Msa1358550 | 0.833059 | 6.629564e-56 | -8.615850e-47 |
| Msa0125230 | Msa1358550 | 0.805120 | 1.555804e-49 | -8.615850e-47 |
| Msa0140220 | Msa1358550 | 0.818141 | 2.288674e-52 | -8.615850e-47 |
| Msa0141430 | Msa1358550 | 0.822061 | 2.896710e-53 | -8.615850e-47 |
| Msa0141830 | Msa1358550 | 0.821125 | 4.768137e-53 | -8.615850e-47 |
| Msa0143430 | Msa1358550 | 0.811358 | 7.285085e-51 | -8.615850e-47 |
| Msa0148780 | Msa1358550 | 0.822088 | 2.855281e-53 | -8.615850e-47 |
| Msa0149620 | Msa1358550 | 0.813904 | 2.020636e-51 | -8.615850e-47 |
| Msa0168100 | Msa1358550 | 0.810874 | 9.279170e-51 | -8.615850e-47 |
| Msa0169690 | Msa1358550 | 0.810819 | 9.533589e-51 | -8.615850e-47 |
| Msa0172350 | Msa1358550 | 0.813927 | 1.997465e-51 | -8.615850e-47 |
| Msa0172960 | Msa1358550 | -0.824027 | 1.008236e-53 | -8.615850e-47 |
| Msa0183610 | Msa1358550 | 0.806193 | 9.263751e-50 | -8.615850e-47 |
| Msa0183620 | Msa1358550 | 0.814451 | 1.530415e-51 | -8.615850e-47 |
| Msa0185700 | Msa1358550 | 0.841588 | 4.338605e-58 | -8.615850e-47 |
| Msa0203160 | Msa1358550 | 0.800561 | 1.360385e-48 | -8.615850e-47 |
| Msa0207000 | Msa1358550 | 0.849894 | 2.412237e-60 | -8.615850e-47 |
| Msa0222920 | Msa1358550 | 0.806225 | 9.123071e-50 | -8.615850e-47 |
| Msa0227500 | Msa1358550 | 0.813034 | 3.138910e-51 | -8.615850e-47 |
| Msa0230550 | Msa1358550 | -0.838153 | 3.405125e-57 | -8.615850e-47 |
| Msa1237030 | Msa1358550 | 0.808987 | 2.364095e-50 | -8.615850e-47 |
| Msa1243170 | Msa1358550 | 0.806656 | 7.398702e-50 | -8.615850e-47 |
| Msa1249870 | Msa1358550 | 0.816423 | 5.573012e-52 | -8.615850e-47 |
| Msa1265960 | Msa1358550 | 0.809761 | 1.612462e-50 | -8.615850e-47 |
| Msa1271510 | Msa1358550 | 0.801904 | 7.224277e-49 | -8.615850e-47 |
| Msa1280120 | Msa1358550 | 0.803966 | 2.708002e-49 | -8.615850e-47 |
| Msa1284520 | Msa1358550 | 0.816495 | 5.369948e-52 | -8.615850e-47 |
| Msa1288170 | Msa1358550 | 0.810635 | 1.045191e-50 | -8.615850e-47 |
| Msa1288190 | Msa1358550 | 0.811497 | 6.797681e-51 | -8.615850e-47 |
| Msa1309240 | Msa1358550 | 0.812223 | 4.722640e-51 | -8.615850e-47 |
| Msa1324000 | Msa1358550 | 0.816721 | 4.777995e-52 | -8.615850e-47 |
| Msa0374070 | Msa1358550 | 0.820351 | 7.181422e-53 | -8.615850e-47 |
| Msa0376510 | Msa1358550 | 0.802520 | 5.395778e-49 | -8.615850e-47 |
| Msa0378340 | Msa1358550 | 0.818915 | 1.528066e-52 | -8.615850e-47 |
| Msa0413930 | Msa1358550 | 0.800783 | 1.225394e-48 | -8.615850e-47 |
| Msa0423250 | Msa1358550 | 0.821042 | 4.983562e-53 | -8.615850e-47 |
| Msa0423360 | Msa1358550 | -0.813762 | 2.172281e-51 | -8.615850e-47 |
| Msa0425050 | Msa1358550 | 0.807217 | 5.630253e-50 | -8.615850e-47 |
| Msa0425940 | Msa1358550 | 0.825441 | 4.680800e-54 | -8.615850e-47 |
| Msa0426160 | Msa1358550 | 0.827581 | 1.445227e-54 | -8.615850e-47 |
| Msa0427690 | Msa1358550 | 0.818692 | 1.716324e-52 | -8.615850e-47 |
| Msa0436460 | Msa1358550 | 0.808771 | 2.629863e-50 | -8.615850e-47 |
| Msa0437710 | Msa1358550 | 0.800634 | 1.314552e-48 | -8.615850e-47 |
| Msa0469390 | Msa1358550 | 0.808247 | 3.401817e-50 | -8.615850e-47 |
| Msa0990520 | Msa1358550 | 0.842461 | 2.549883e-58 | -8.615850e-47 |
| Msa1008490 | Msa1358550 | 0.803085 | 4.124204e-49 | -8.615850e-47 |
| Msa1010730 | Msa1358550 | 0.842848 | 2.012644e-58 | -8.615850e-47 |
| Msa1012810 | Msa1358550 | 0.800180 | 1.626723e-48 | -8.615850e-47 |
| Msa1014270 | Msa1358550 | 0.823028 | 1.726929e-53 | -8.615850e-47 |
| Msa1018050 | Msa1358550 | 0.805078 | 1.587580e-49 | -8.615850e-47 |
| Msa1018790 | Msa1358550 | 0.834956 | 2.220541e-56 | -8.615850e-47 |
| Msa1020710 | Msa1358550 | 0.807437 | 5.057775e-50 | -8.615850e-47 |
| Msa1037000 | Msa1358550 | 0.812532 | 4.044577e-51 | -8.615850e-47 |
| Msa1038050 | Msa1358550 | 0.803603 | 3.221148e-49 | -8.615850e-47 |
| Msa1040830 | Msa1358550 | 0.829679 | 4.496824e-55 | -8.615850e-47 |
| Msa1044340 | Msa1358550 | 0.829749 | 4.324591e-55 | -8.615850e-47 |
| Msa1054240 | Msa1358550 | 0.812946 | 3.282343e-51 | -8.615850e-47 |
| Msa1055260 | Msa1358550 | 0.828645 | 8.010909e-55 | -8.615850e-47 |
| Msa1055280 | Msa1358550 | 0.821000 | 5.094312e-53 | -8.615850e-47 |
| Msa1055690 | Msa1358550 | 0.829846 | 4.094792e-55 | -8.615850e-47 |
| Msa1072080 | Msa1358550 | 0.803145 | 4.009294e-49 | -8.615850e-47 |
| Msa1073840 | Msa1358550 | 0.813288 | 2.761606e-51 | -8.615850e-47 |
| Msa1082700 | Msa1358550 | 0.823694 | 1.206919e-53 | -8.615850e-47 |
| Msa1089530 | Msa1358550 | 0.807077 | 6.027860e-50 | -8.615850e-47 |
| Msa1106560 | Msa1358550 | 0.813836 | 2.092023e-51 | -8.615850e-47 |
| Msa0239660 | Msa1358550 | 0.822122 | 2.805083e-53 | -8.615850e-47 |
| Msa0246690 | Msa1358550 | 0.836542 | 8.803400e-57 | -8.615850e-47 |
| Msa0259560 | Msa1358550 | 0.813541 | 2.429599e-51 | -8.615850e-47 |
| Msa0264350 | Msa1358550 | 0.839028 | 2.024153e-57 | -8.615850e-47 |
| Msa0267760 | Msa1358550 | 0.824798 | 6.639539e-54 | -8.615850e-47 |
| Msa0277640 | Msa1358550 | 0.803703 | 3.072210e-49 | -8.615850e-47 |
| Msa0278620 | Msa1358550 | 0.809130 | 2.203166e-50 | -8.615850e-47 |
| Msa0280900 | Msa1358550 | 0.803711 | 3.059264e-49 | -8.615850e-47 |
| Msa0289890 | Msa1358550 | 0.817020 | 4.095009e-52 | -8.615850e-47 |
| Msa0298970 | Msa1358550 | 0.821410 | 4.097869e-53 | -8.615850e-47 |
| Msa0301180 | Msa1358550 | 0.803820 | 2.905012e-49 | -8.615850e-47 |
| Msa0302450 | Msa1358550 | 0.832955 | 7.034419e-56 | -8.615850e-47 |
| Msa0318000 | Msa1358550 | 0.812793 | 3.545153e-51 | -8.615850e-47 |
| Msa0319200 | Msa1358550 | 0.812249 | 4.662468e-51 | -8.615850e-47 |
| Msa0342200 | Msa1358550 | 0.822527 | 2.258357e-53 | -8.615850e-47 |
| Msa1115330 | Msa1358550 | 0.809296 | 2.029177e-50 | -8.615850e-47 |
| Msa1125780 | Msa1358550 | 0.804623 | 1.976726e-49 | -8.615850e-47 |
| Msa1125950 | Msa1358550 | 0.810409 | 1.169288e-50 | -8.615850e-47 |
| Msa1129560 | Msa1358550 | 0.831875 | 1.302713e-55 | -8.615850e-47 |
| Msa1129720 | Msa1358550 | 0.823834 | 1.118905e-53 | -8.615850e-47 |
| Msa1139810 | Msa1358550 | 0.818011 | 2.448504e-52 | -8.615850e-47 |
| Msa1159100 | Msa1358550 | 0.855805 | 4.928614e-62 | -8.615850e-47 |
| Msa1159990 | Msa1358550 | 0.806276 | 8.896949e-50 | -8.615850e-47 |
| Msa1171340 | Msa1358550 | 0.807618 | 4.628470e-50 | -8.615850e-47 |
| Msa1171690 | Msa1358550 | 0.809332 | 1.994333e-50 | -8.615850e-47 |
| Msa1176690 | Msa1358550 | 0.829277 | 5.633839e-55 | -8.615850e-47 |
| Msa1188940 | Msa1358550 | 0.809733 | 1.635404e-50 | -8.615850e-47 |
| Msa1197110 | Msa1358550 | 0.804188 | 2.434897e-49 | -8.615850e-47 |
| Msa1210770 | Msa1358550 | 0.833942 | 3.990282e-56 | -8.615850e-47 |
| Msa1220450 | Msa1358550 | -0.811815 | 5.795641e-51 | -8.615850e-47 |
| Msa1220460 | Msa1358550 | -0.813531 | 2.442056e-51 | -8.615850e-47 |
| Msa1220480 | Msa1358550 | -0.812965 | 3.250253e-51 | -8.615850e-47 |
| Msa1221560 | Msa1358550 | 0.824044 | 9.990215e-54 | -8.615850e-47 |
| Msa0509970 | Msa1358550 | 0.809657 | 1.697731e-50 | -8.615850e-47 |
| Msa0510440 | Msa1358550 | 0.810856 | 9.360582e-51 | -8.615850e-47 |
| Msa0518520 | Msa1358550 | 0.818232 | 2.182834e-52 | -8.615850e-47 |
| Msa0524090 | Msa1358550 | 0.804407 | 2.192597e-49 | -8.615850e-47 |
| Msa0524120 | Msa1358550 | 0.828768 | 7.481957e-55 | -8.615850e-47 |
| Msa0526710 | Msa1358550 | 0.814955 | 1.183730e-51 | -8.615850e-47 |
| Msa0527590 | Msa1358550 | 0.805513 | 1.287430e-49 | -8.615850e-47 |
| Msa0527600 | Msa1358550 | 0.811042 | 8.533710e-51 | -8.615850e-47 |
| Msa0532840 | Msa1358550 | 0.803926 | 2.760637e-49 | -8.615850e-47 |
| Msa0546380 | Msa1358550 | 0.822060 | 2.898352e-53 | -8.615850e-47 |
| Msa0546840 | Msa1358550 | 0.816059 | 6.720687e-52 | -8.615850e-47 |
| Msa0576420 | Msa1358550 | 0.807792 | 4.250325e-50 | -8.615850e-47 |
| Msa0843690 | Msa1358550 | 0.803002 | 4.291079e-49 | -8.615850e-47 |
| Msa0846030 | Msa1358550 | 0.801198 | 1.008469e-48 | -8.615850e-47 |
| Msa0862100 | Msa1358550 | 0.807857 | 4.117956e-50 | -8.615850e-47 |
| Msa0863240 | Msa1358550 | 0.811396 | 7.149389e-51 | -8.615850e-47 |
| Msa0872310 | Msa1358550 | 0.816079 | 6.653177e-52 | -8.615850e-47 |
| Msa0889740 | Msa1358550 | 0.805601 | 1.233751e-49 | -8.615850e-47 |
| Msa0890250 | Msa1358550 | 0.823384 | 1.426153e-53 | -8.615850e-47 |
| Msa0905550 | Msa1358550 | 0.817520 | 3.160430e-52 | -8.615850e-47 |
| Msa0907700 | Msa1358550 | 0.809160 | 2.170355e-50 | -8.615850e-47 |
| Msa0925160 | Msa1358550 | 0.839803 | 1.273174e-57 | -8.615850e-47 |
| Msa0930330 | Msa1358550 | 0.811379 | 7.208959e-51 | -8.615850e-47 |
| Msa0937550 | Msa1358550 | 0.818602 | 1.799193e-52 | -8.615850e-47 |
| Msa0955260 | Msa1358550 | 0.808517 | 2.978479e-50 | -8.615850e-47 |
| Msa0969570 | Msa1358550 | 0.810572 | 1.078336e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358550 | MtrunA17_Chr3g0142401 | 97.387 | 421 | 11 | 0 | 1 | 421 | 1 | 421 | 0.0 | 848 |
| Msa1358550 | MtrunA17_Chr1g0156281 | 76.457 | 429 | 88 | 5 | 1 | 420 | 1 | 425 | 0.0 | 656 |
| Msa1358550 | MtrunA17_Chr3g0113761 | 93.204 | 309 | 8 | 1 | 29 | 337 | 1 | 296 | 0.0 | 595 |
| Msa1358550 | MtrunA17_Chr8g0367771 | 72.368 | 228 | 48 | 3 | 197 | 420 | 34 | 250 | 1.87e-115 | 337 |
| Msa1358550 | MtrunA17_Chr2g0291511 | 40.053 | 377 | 208 | 8 | 56 | 419 | 92 | 463 | 4.07e-89 | 278 |
| Msa1358550 | MtrunA17_Chr2g0291531 | 37.123 | 431 | 224 | 11 | 30 | 419 | 34 | 458 | 7.35e-89 | 277 |
| Msa1358550 | MtrunA17_Chr3g0113501 | 95.522 | 134 | 6 | 0 | 227 | 360 | 40 | 173 | 7.80e-89 | 267 |
| Msa1358550 | MtrunA17_Chr5g0434311 | 42.722 | 316 | 169 | 8 | 113 | 420 | 74 | 385 | 1.29e-86 | 269 |
| Msa1358550 | MtrunA17_Chr8g0348141 | 40.785 | 331 | 175 | 7 | 104 | 420 | 164 | 487 | 3.15e-82 | 261 |
| Msa1358550 | MtrunA17_Chr0c01g0489331 | 41.667 | 324 | 172 | 9 | 104 | 421 | 147 | 459 | 4.97e-82 | 259 |
| Msa1358550 | MtrunA17_Chr4g0051831 | 32.847 | 411 | 227 | 9 | 19 | 419 | 4 | 375 | 1.39e-62 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358550 | AT3G27230.1 | 70.071 | 421 | 115 | 6 | 1 | 421 | 1 | 410 | 0.0 | 599 |
| Msa1358550 | AT5G40830.1 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| Msa1358550 | AT5G40830.2 | 68.483 | 422 | 124 | 4 | 1 | 421 | 1 | 414 | 0.0 | 595 |
| Msa1358550 | AT5G40830.3 | 62.796 | 422 | 108 | 5 | 1 | 421 | 1 | 374 | 0.0 | 530 |
| Msa1358550 | AT3G05390.1 | 40.741 | 324 | 175 | 8 | 104 | 421 | 150 | 462 | 7.51e-84 | 264 |
| Msa1358550 | AT4G01240.1 | 41.667 | 348 | 173 | 10 | 89 | 420 | 323 | 656 | 9.52e-80 | 259 |
| Msa1358550 | AT1G29790.2 | 33.835 | 399 | 232 | 7 | 24 | 419 | 7 | 376 | 2.69e-71 | 229 |
| Msa1358550 | AT1G29790.1 | 33.835 | 399 | 232 | 7 | 24 | 419 | 7 | 376 | 2.69e-71 | 229 |
Find 56 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGTTTCCAAAGTGAATT+TGG | 0.174013 | tig0016349:+10936 | Msa1358550:intergenic |
| CATTTCAGTGATTCCAGTTT+TGG | 0.201099 | tig0016349:+11154 | Msa1358550:intergenic |
| CTGTTCTTCAGAAGCCTGTT+AGG | 0.201673 | tig0016349:-10284 | Msa1358550:CDS |
| TTAGCAAAACACCTTCTTCT+AGG | 0.243776 | tig0016349:+10996 | Msa1358550:intergenic |
| TGCTAAATCTGTTTCTTCTA+AGG | 0.249692 | tig0016349:-10979 | Msa1358550:CDS |
| GGTTCTGTTTCTTTGAAAAT+TGG | 0.270644 | tig0016349:-11518 | Msa1358550:CDS |
| TTTGATATTGGAATTGGTTC+TGG | 0.272985 | tig0016349:-10711 | Msa1358550:CDS |
| TCAAAGACATTATCATAAAA+AGG | 0.296087 | tig0016349:+10555 | Msa1358550:intergenic |
| TTAGTAACAAGACTGTTAAT+TGG | 0.301382 | tig0016349:-10914 | Msa1358550:CDS |
| TTATGATAATGTCTTTGATT+TGG | 0.302543 | tig0016349:-10550 | Msa1358550:CDS |
| TAACCCTCATAAACTTCCTT+TGG | 0.314405 | tig0016349:-11186 | Msa1358550:CDS |
| TTGGGTAAAGATTCCAAAAC+TGG | 0.315442 | tig0016349:-11167 | Msa1358550:CDS |
| TGCGGGCTGGTGGTTTGTTT+TGG | 0.317509 | tig0016349:-10443 | Msa1358550:CDS |
| TTAACAGTCTTGTTACTAAC+AGG | 0.318712 | tig0016349:+10918 | Msa1358550:intergenic |
| TCACTTGTTTACACCCTAAC+AGG | 0.330154 | tig0016349:+10270 | Msa1358550:intergenic |
| TTGGATACAGAAAATTGAAA+TGG | 0.350308 | tig0016349:-10356 | Msa1358550:CDS |
| ATAGGATTTGATATTGGAAT+TGG | 0.350657 | tig0016349:-10717 | Msa1358550:CDS |
| ATTAGAATAGGATTTGATAT+TGG | 0.361463 | tig0016349:-10723 | Msa1358550:CDS |
| TATATGAATTACAAAGTGTT+TGG | 0.369620 | tig0016349:-11080 | Msa1358550:CDS |
| TTGCATGCATTGCTTTGATT+TGG | 0.380204 | tig0016349:-10835 | Msa1358550:CDS |
| AACCCTCATAAACTTCCTTT+GGG | 0.381617 | tig0016349:-11185 | Msa1358550:CDS |
| CAAAGTGTTTGGAAATTGTC+AGG | 0.382386 | tig0016349:-11069 | Msa1358550:CDS |
| TTGGAAATTGTCAGGATGAT+TGG | 0.389503 | tig0016349:-11061 | Msa1358550:CDS |
| ACAAGGTTGATTGAAAGGTT+TGG | 0.397211 | tig0016349:-10375 | Msa1358550:CDS |
| GGAAATGGTGGAATTAGAAT+AGG | 0.400305 | tig0016349:-10735 | Msa1358550:CDS |
| CATTGCTTTGATTTGGTGAA+TGG | 0.407664 | tig0016349:-10828 | Msa1358550:CDS |
| CAAAACTGGAATCACTGAAA+TGG | 0.411701 | tig0016349:-11153 | Msa1358550:CDS |
| TTACCCAAAGGAAGTTTATG+AGG | 0.415254 | tig0016349:+11182 | Msa1358550:intergenic |
| TGGATACAGAAAATTGAAAT+GGG | 0.423072 | tig0016349:-10355 | Msa1358550:CDS |
| CAGAAAATTGAAATGGGTTG+TGG | 0.423087 | tig0016349:-10349 | Msa1358550:CDS |
| TTCCAAAGTGAATTTGGAAA+AGG | 0.423351 | tig0016349:+10942 | Msa1358550:intergenic |
| CATTGACAAGGTTGATTGAA+AGG | 0.426565 | tig0016349:-10380 | Msa1358550:CDS |
| CTTGGTGAAGTTGTTCGGTT+TGG | 0.435606 | tig0016349:+11369 | Msa1358550:intergenic |
| TGGTAAGAAACAAGAGAAGT+TGG | 0.449209 | tig0016349:-10496 | Msa1358550:CDS |
| TGTTCTTCAGAAGCCTGTTA+GGG | 0.451195 | tig0016349:-10283 | Msa1358550:CDS |
| AGAAAATTGAAATGGGTTGT+GGG | 0.464176 | tig0016349:-10348 | Msa1358550:CDS |
| AATGGTAAGAAATTGAATAG+AGG | 0.470921 | tig0016349:-10858 | Msa1358550:CDS |
| GTGTACTTGGTGAAGTTGTT+CGG | 0.472086 | tig0016349:+11364 | Msa1358550:intergenic |
| TGATCCAAGCTTAAGAAAAG+AGG | 0.499670 | tig0016349:+10585 | Msa1358550:intergenic |
| CACTGAAATGGTTTCATCTG+TGG | 0.507607 | tig0016349:-11141 | Msa1358550:CDS |
| TGAATGGTTATGAGAATCAA+AGG | 0.511808 | tig0016349:-10812 | Msa1358550:CDS |
| GCAGCTATAAATTCATTGAA+AGG | 0.519697 | tig0016349:+10621 | Msa1358550:intergenic |
| GGTTCGTGCTACAAATACCT+TGG | 0.520674 | tig0016349:-10529 | Msa1358550:CDS |
| AACAAGACTGTTAATTGGAG+TGG | 0.522922 | tig0016349:-10909 | Msa1358550:CDS |
| GTTTCTTTGAAAATTGGTGA+TGG | 0.525785 | tig0016349:-11512 | Msa1358550:CDS |
| AAACACCTTCTTCTAGGTAA+AGG | 0.526592 | tig0016349:+11002 | Msa1358550:intergenic |
| GAAATGGGTTGTGGGAGAAA+AGG | 0.531934 | tig0016349:-10340 | Msa1358550:CDS |
| GTGGGAGAAAAGGTTGATAG+TGG | 0.534948 | tig0016349:-10330 | Msa1358550:CDS |
| AATGAATTTATAGCTGCAAG+AGG | 0.548634 | tig0016349:-10615 | Msa1358550:CDS |
| ACTGAAATGGTTTCATCTGT+GGG | 0.553481 | tig0016349:-11140 | Msa1358550:CDS |
| TACCCAAAGGAAGTTTATGA+GGG | 0.566733 | tig0016349:+11183 | Msa1358550:intergenic |
| GTGAGCCTTTACCTAGAAGA+AGG | 0.567293 | tig0016349:-11007 | Msa1358550:CDS |
| TTGCTGCTGTAATGGCTGAA+AGG | 0.580054 | tig0016349:-10683 | Msa1358550:CDS |
| AGAAGAAAATTTCATTGACA+AGG | 0.582193 | tig0016349:-10392 | Msa1358550:CDS |
| CTTACCAACATCATCATCCA+AGG | 0.591615 | tig0016349:+10512 | Msa1358550:intergenic |
| AATACCTTGGATGATGATGT+TGG | 0.652086 | tig0016349:-10516 | Msa1358550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATGAATTACAAAGTGTT+TGG | - | tig0016349:10719-10738 | Msa1358550:CDS | 20.0% |
| !! | ATTAGAATAGGATTTGATAT+TGG | - | tig0016349:11076-11095 | Msa1358550:CDS | 20.0% |
| !! | TCAAAGACATTATCATAAAA+AGG | + | tig0016349:11247-11266 | Msa1358550:intergenic | 20.0% |
| !!! | TTATGATAATGTCTTTGATT+TGG | - | tig0016349:11249-11268 | Msa1358550:CDS | 20.0% |
| !!! | TATATGAATTACAAAGTGTT+TGG | - | tig0016349:10719-10738 | Msa1358550:CDS | 20.0% |
| !! | ATTAGAATAGGATTTGATAT+TGG | - | tig0016349:11076-11095 | Msa1358550:CDS | 20.0% |
| !! | TCAAAGACATTATCATAAAA+AGG | + | tig0016349:11247-11266 | Msa1358550:intergenic | 20.0% |
| !!! | TTATGATAATGTCTTTGATT+TGG | - | tig0016349:11249-11268 | Msa1358550:CDS | 20.0% |
| !! | AAAAAGATTGGTTGTGATAA+CGG | + | tig0016349:10375-10394 | Msa1358550:intergenic | 25.0% |
| !!! | CTCAGAAATTGATTTTGAAA+GGG | - | tig0016349:10768-10787 | Msa1358550:CDS | 25.0% |
| ! | TTAGTAACAAGACTGTTAAT+TGG | - | tig0016349:10885-10904 | Msa1358550:CDS | 25.0% |
| !!! | AAGAATTTTGAGTGTTTGAA+TGG | - | tig0016349:10923-10942 | Msa1358550:CDS | 25.0% |
| ! | AATGGTAAGAAATTGAATAG+AGG | - | tig0016349:10941-10960 | Msa1358550:CDS | 25.0% |
| ! | ATAGGATTTGATATTGGAAT+TGG | - | tig0016349:11082-11101 | Msa1358550:CDS | 25.0% |
| ! | AGAAGAAAATTTCATTGACA+AGG | - | tig0016349:11407-11426 | Msa1358550:CDS | 25.0% |
| ! | TTGGATACAGAAAATTGAAA+TGG | - | tig0016349:11443-11462 | Msa1358550:CDS | 25.0% |
| ! | TGGATACAGAAAATTGAAAT+GGG | - | tig0016349:11444-11463 | Msa1358550:CDS | 25.0% |
| !! | AAAAAGATTGGTTGTGATAA+CGG | + | tig0016349:10375-10394 | Msa1358550:intergenic | 25.0% |
| !!! | CTCAGAAATTGATTTTGAAA+GGG | - | tig0016349:10768-10787 | Msa1358550:CDS | 25.0% |
| ! | TTAGTAACAAGACTGTTAAT+TGG | - | tig0016349:10885-10904 | Msa1358550:CDS | 25.0% |
| !!! | AAGAATTTTGAGTGTTTGAA+TGG | - | tig0016349:10923-10942 | Msa1358550:CDS | 25.0% |
| ! | AATGGTAAGAAATTGAATAG+AGG | - | tig0016349:10941-10960 | Msa1358550:CDS | 25.0% |
| ! | ATAGGATTTGATATTGGAAT+TGG | - | tig0016349:11082-11101 | Msa1358550:CDS | 25.0% |
| ! | AGAAGAAAATTTCATTGACA+AGG | - | tig0016349:11407-11426 | Msa1358550:CDS | 25.0% |
| ! | TTGGATACAGAAAATTGAAA+TGG | - | tig0016349:11443-11462 | Msa1358550:CDS | 25.0% |
| ! | TGGATACAGAAAATTGAAAT+GGG | - | tig0016349:11444-11463 | Msa1358550:CDS | 25.0% |
| ! | GGTTCTGTTTCTTTGAAAAT+TGG | - | tig0016349:10281-10300 | Msa1358550:CDS | 30.0% |
| ! | GTTTCTTTGAAAATTGGTGA+TGG | - | tig0016349:10287-10306 | Msa1358550:CDS | 30.0% |
| AGCATAAAGAGCAAAAAGAT+TGG | + | tig0016349:10387-10406 | Msa1358550:intergenic | 30.0% | |
| !!! | AAGAAGCTGTTTTTCTATCT+GGG | + | tig0016349:10534-10553 | Msa1358550:intergenic | 30.0% |
| ! | TTAAGCTCTTTTGCAATGTT+GGG | + | tig0016349:10584-10603 | Msa1358550:intergenic | 30.0% |
| ! | TTTAAGCTCTTTTGCAATGT+TGG | + | tig0016349:10585-10604 | Msa1358550:intergenic | 30.0% |
| !! | GCTCAGAAATTGATTTTGAA+AGG | - | tig0016349:10767-10786 | Msa1358550:CDS | 30.0% |
| ! | TGCTAAATCTGTTTCTTCTA+AGG | - | tig0016349:10820-10839 | Msa1358550:CDS | 30.0% |
| ! | ATCCTTTTCCAAATTCACTT+TGG | - | tig0016349:10855-10874 | Msa1358550:CDS | 30.0% |
| TTCCAAAGTGAATTTGGAAA+AGG | + | tig0016349:10860-10879 | Msa1358550:intergenic | 30.0% | |
| !! | TTAACAGTCTTGTTACTAAC+AGG | + | tig0016349:10884-10903 | Msa1358550:intergenic | 30.0% |
| TGAATGGTTATGAGAATCAA+AGG | - | tig0016349:10987-11006 | Msa1358550:CDS | 30.0% | |
| !! | TTTTCTTGCTGATGATGTTT+TGG | - | tig0016349:11036-11055 | Msa1358550:CDS | 30.0% |
| ! | TTTGATATTGGAATTGGTTC+TGG | - | tig0016349:11088-11107 | Msa1358550:CDS | 30.0% |
| GCAGCTATAAATTCATTGAA+AGG | + | tig0016349:11181-11200 | Msa1358550:intergenic | 30.0% | |
| AATGAATTTATAGCTGCAAG+AGG | - | tig0016349:11184-11203 | Msa1358550:CDS | 30.0% | |
| ! | TTTTCCTCTTTTCTTAAGCT+TGG | - | tig0016349:11210-11229 | Msa1358550:CDS | 30.0% |
| ! | TTTTCTTAAGCTTGGATCAT+AGG | - | tig0016349:11218-11237 | Msa1358550:CDS | 30.0% |
| !! | AGAAAATTGAAATGGGTTGT+GGG | - | tig0016349:11451-11470 | Msa1358550:CDS | 30.0% |
| ! | GGTTCTGTTTCTTTGAAAAT+TGG | - | tig0016349:10281-10300 | Msa1358550:CDS | 30.0% |
| ! | GTTTCTTTGAAAATTGGTGA+TGG | - | tig0016349:10287-10306 | Msa1358550:CDS | 30.0% |
| AGCATAAAGAGCAAAAAGAT+TGG | + | tig0016349:10387-10406 | Msa1358550:intergenic | 30.0% | |
| !!! | AAGAAGCTGTTTTTCTATCT+GGG | + | tig0016349:10534-10553 | Msa1358550:intergenic | 30.0% |
| ! | TTAAGCTCTTTTGCAATGTT+GGG | + | tig0016349:10584-10603 | Msa1358550:intergenic | 30.0% |
| ! | TTTAAGCTCTTTTGCAATGT+TGG | + | tig0016349:10585-10604 | Msa1358550:intergenic | 30.0% |
| !! | GCTCAGAAATTGATTTTGAA+AGG | - | tig0016349:10767-10786 | Msa1358550:CDS | 30.0% |
| ! | TGCTAAATCTGTTTCTTCTA+AGG | - | tig0016349:10820-10839 | Msa1358550:CDS | 30.0% |
| ! | ATCCTTTTCCAAATTCACTT+TGG | - | tig0016349:10855-10874 | Msa1358550:CDS | 30.0% |
| TTCCAAAGTGAATTTGGAAA+AGG | + | tig0016349:10860-10879 | Msa1358550:intergenic | 30.0% | |
| !! | TTAACAGTCTTGTTACTAAC+AGG | + | tig0016349:10884-10903 | Msa1358550:intergenic | 30.0% |
| TGAATGGTTATGAGAATCAA+AGG | - | tig0016349:10987-11006 | Msa1358550:CDS | 30.0% | |
| !! | TTTTCTTGCTGATGATGTTT+TGG | - | tig0016349:11036-11055 | Msa1358550:CDS | 30.0% |
| ! | TTTGATATTGGAATTGGTTC+TGG | - | tig0016349:11088-11107 | Msa1358550:CDS | 30.0% |
| GCAGCTATAAATTCATTGAA+AGG | + | tig0016349:11181-11200 | Msa1358550:intergenic | 30.0% | |
| AATGAATTTATAGCTGCAAG+AGG | - | tig0016349:11184-11203 | Msa1358550:CDS | 30.0% | |
| ! | TTTTCCTCTTTTCTTAAGCT+TGG | - | tig0016349:11210-11229 | Msa1358550:CDS | 30.0% |
| ! | TTTTCTTAAGCTTGGATCAT+AGG | - | tig0016349:11218-11237 | Msa1358550:CDS | 30.0% |
| !! | AGAAAATTGAAATGGGTTGT+GGG | - | tig0016349:11451-11470 | Msa1358550:CDS | 30.0% |
| ! | GAGAGAAGTTTTTGTGTACT+TGG | + | tig0016349:10451-10470 | Msa1358550:intergenic | 35.0% |
| !!! | CAAGAAGCTGTTTTTCTATC+TGG | + | tig0016349:10535-10554 | Msa1358550:intergenic | 35.0% |
| CAGATAGAAAAACAGCTTCT+TGG | - | tig0016349:10533-10552 | Msa1358550:CDS | 35.0% | |
| TAACCCTCATAAACTTCCTT+TGG | - | tig0016349:10613-10632 | Msa1358550:CDS | 35.0% | |
| AACCCTCATAAACTTCCTTT+GGG | - | tig0016349:10614-10633 | Msa1358550:CDS | 35.0% | |
| TACCCAAAGGAAGTTTATGA+GGG | + | tig0016349:10619-10638 | Msa1358550:intergenic | 35.0% | |
| TTACCCAAAGGAAGTTTATG+AGG | + | tig0016349:10620-10639 | Msa1358550:intergenic | 35.0% | |
| !!! | GTTTTGGAATCTTTACCCAA+AGG | + | tig0016349:10632-10651 | Msa1358550:intergenic | 35.0% |
| TTGGGTAAAGATTCCAAAAC+TGG | - | tig0016349:10632-10651 | Msa1358550:CDS | 35.0% | |
| ! | CATTTCAGTGATTCCAGTTT+TGG | + | tig0016349:10648-10667 | Msa1358550:intergenic | 35.0% |
| CAAAACTGGAATCACTGAAA+TGG | - | tig0016349:10646-10665 | Msa1358550:CDS | 35.0% | |
| ACTGAAATGGTTTCATCTGT+GGG | - | tig0016349:10659-10678 | Msa1358550:CDS | 35.0% | |
| ! | CAAAGTGTTTGGAAATTGTC+AGG | - | tig0016349:10730-10749 | Msa1358550:CDS | 35.0% |
| TTGGAAATTGTCAGGATGAT+TGG | - | tig0016349:10738-10757 | Msa1358550:CDS | 35.0% | |
| AAACACCTTCTTCTAGGTAA+AGG | + | tig0016349:10800-10819 | Msa1358550:intergenic | 35.0% | |
| TTAGCAAAACACCTTCTTCT+AGG | + | tig0016349:10806-10825 | Msa1358550:intergenic | 35.0% | |
| ACAGGTTTCCAAAGTGAATT+TGG | + | tig0016349:10866-10885 | Msa1358550:intergenic | 35.0% | |
| AACAAGACTGTTAATTGGAG+TGG | - | tig0016349:10890-10909 | Msa1358550:CDS | 35.0% | |
| TTGCATGCATTGCTTTGATT+TGG | - | tig0016349:10964-10983 | Msa1358550:CDS | 35.0% | |
| !! | CATTGCTTTGATTTGGTGAA+TGG | - | tig0016349:10971-10990 | Msa1358550:CDS | 35.0% |
| !!! | GATGTTTTGGCATTAGGAAA+TGG | - | tig0016349:11049-11068 | Msa1358550:CDS | 35.0% |
| ! | GGAAATGGTGGAATTAGAAT+AGG | - | tig0016349:11064-11083 | Msa1358550:CDS | 35.0% |
| TGATCCAAGCTTAAGAAAAG+AGG | + | tig0016349:11217-11236 | Msa1358550:intergenic | 35.0% | |
| ! | AATACCTTGGATGATGATGT+TGG | - | tig0016349:11283-11302 | Msa1358550:CDS | 35.0% |
| TGGTAAGAAACAAGAGAAGT+TGG | - | tig0016349:11303-11322 | Msa1358550:CDS | 35.0% | |
| ! | CATTGACAAGGTTGATTGAA+AGG | - | tig0016349:11419-11438 | Msa1358550:CDS | 35.0% |
| ! | ACAAGGTTGATTGAAAGGTT+TGG | - | tig0016349:11424-11443 | Msa1358550:CDS | 35.0% |
| !! | CAGAAAATTGAAATGGGTTG+TGG | - | tig0016349:11450-11469 | Msa1358550:CDS | 35.0% |
| ! | GAGAGAAGTTTTTGTGTACT+TGG | + | tig0016349:10451-10470 | Msa1358550:intergenic | 35.0% |
| !!! | CAAGAAGCTGTTTTTCTATC+TGG | + | tig0016349:10535-10554 | Msa1358550:intergenic | 35.0% |
| CAGATAGAAAAACAGCTTCT+TGG | - | tig0016349:10533-10552 | Msa1358550:CDS | 35.0% | |
| TAACCCTCATAAACTTCCTT+TGG | - | tig0016349:10613-10632 | Msa1358550:CDS | 35.0% | |
| AACCCTCATAAACTTCCTTT+GGG | - | tig0016349:10614-10633 | Msa1358550:CDS | 35.0% | |
| TACCCAAAGGAAGTTTATGA+GGG | + | tig0016349:10619-10638 | Msa1358550:intergenic | 35.0% | |
| TTACCCAAAGGAAGTTTATG+AGG | + | tig0016349:10620-10639 | Msa1358550:intergenic | 35.0% | |
| !!! | GTTTTGGAATCTTTACCCAA+AGG | + | tig0016349:10632-10651 | Msa1358550:intergenic | 35.0% |
| TTGGGTAAAGATTCCAAAAC+TGG | - | tig0016349:10632-10651 | Msa1358550:CDS | 35.0% | |
| ! | CATTTCAGTGATTCCAGTTT+TGG | + | tig0016349:10648-10667 | Msa1358550:intergenic | 35.0% |
| CAAAACTGGAATCACTGAAA+TGG | - | tig0016349:10646-10665 | Msa1358550:CDS | 35.0% | |
| ACTGAAATGGTTTCATCTGT+GGG | - | tig0016349:10659-10678 | Msa1358550:CDS | 35.0% | |
| ! | CAAAGTGTTTGGAAATTGTC+AGG | - | tig0016349:10730-10749 | Msa1358550:CDS | 35.0% |
| TTGGAAATTGTCAGGATGAT+TGG | - | tig0016349:10738-10757 | Msa1358550:CDS | 35.0% | |
| AAACACCTTCTTCTAGGTAA+AGG | + | tig0016349:10800-10819 | Msa1358550:intergenic | 35.0% | |
| TTAGCAAAACACCTTCTTCT+AGG | + | tig0016349:10806-10825 | Msa1358550:intergenic | 35.0% | |
| ACAGGTTTCCAAAGTGAATT+TGG | + | tig0016349:10866-10885 | Msa1358550:intergenic | 35.0% | |
| AACAAGACTGTTAATTGGAG+TGG | - | tig0016349:10890-10909 | Msa1358550:CDS | 35.0% | |
| TTGCATGCATTGCTTTGATT+TGG | - | tig0016349:10964-10983 | Msa1358550:CDS | 35.0% | |
| !! | CATTGCTTTGATTTGGTGAA+TGG | - | tig0016349:10971-10990 | Msa1358550:CDS | 35.0% |
| !!! | GATGTTTTGGCATTAGGAAA+TGG | - | tig0016349:11049-11068 | Msa1358550:CDS | 35.0% |
| ! | GGAAATGGTGGAATTAGAAT+AGG | - | tig0016349:11064-11083 | Msa1358550:CDS | 35.0% |
| TGATCCAAGCTTAAGAAAAG+AGG | + | tig0016349:11217-11236 | Msa1358550:intergenic | 35.0% | |
| ! | AATACCTTGGATGATGATGT+TGG | - | tig0016349:11283-11302 | Msa1358550:CDS | 35.0% |
| TGGTAAGAAACAAGAGAAGT+TGG | - | tig0016349:11303-11322 | Msa1358550:CDS | 35.0% | |
| ! | CATTGACAAGGTTGATTGAA+AGG | - | tig0016349:11419-11438 | Msa1358550:CDS | 35.0% |
| ! | ACAAGGTTGATTGAAAGGTT+TGG | - | tig0016349:11424-11443 | Msa1358550:CDS | 35.0% |
| !! | CAGAAAATTGAAATGGGTTG+TGG | - | tig0016349:11450-11469 | Msa1358550:CDS | 35.0% |
| !!! | TGTTCGGTTTGGCTGTTTTT+TGG | + | tig0016349:10422-10441 | Msa1358550:intergenic | 40.0% |
| ! | GTGTACTTGGTGAAGTTGTT+CGG | + | tig0016349:10438-10457 | Msa1358550:intergenic | 40.0% |
| CACTGAAATGGTTTCATCTG+TGG | - | tig0016349:10658-10677 | Msa1358550:CDS | 40.0% | |
| !!! | GCTGATGATGTTTTGGCATT+AGG | - | tig0016349:11043-11062 | Msa1358550:CDS | 40.0% |
| !! | GTTTTGGCATTAGGAAATGG+TGG | - | tig0016349:11052-11071 | Msa1358550:CDS | 40.0% |
| ! | TGGATCTTTTGCTGCTGTAA+TGG | - | tig0016349:11108-11127 | Msa1358550:CDS | 40.0% |
| CTTACCAACATCATCATCCA+AGG | + | tig0016349:11290-11309 | Msa1358550:intergenic | 40.0% | |
| ! | TCGACATCGATCGAATTTTG+CGG | - | tig0016349:11338-11357 | Msa1358550:CDS | 40.0% |
| TGTTCTTCAGAAGCCTGTTA+GGG | - | tig0016349:11516-11535 | Msa1358550:CDS | 40.0% | |
| !!! | TGTTCGGTTTGGCTGTTTTT+TGG | + | tig0016349:10422-10441 | Msa1358550:intergenic | 40.0% |
| ! | GTGTACTTGGTGAAGTTGTT+CGG | + | tig0016349:10438-10457 | Msa1358550:intergenic | 40.0% |
| CACTGAAATGGTTTCATCTG+TGG | - | tig0016349:10658-10677 | Msa1358550:CDS | 40.0% | |
| !!! | GCTGATGATGTTTTGGCATT+AGG | - | tig0016349:11043-11062 | Msa1358550:CDS | 40.0% |
| !! | GTTTTGGCATTAGGAAATGG+TGG | - | tig0016349:11052-11071 | Msa1358550:CDS | 40.0% |
| ! | TGGATCTTTTGCTGCTGTAA+TGG | - | tig0016349:11108-11127 | Msa1358550:CDS | 40.0% |
| CTTACCAACATCATCATCCA+AGG | + | tig0016349:11290-11309 | Msa1358550:intergenic | 40.0% | |
| ! | TCGACATCGATCGAATTTTG+CGG | - | tig0016349:11338-11357 | Msa1358550:CDS | 40.0% |
| TGTTCTTCAGAAGCCTGTTA+GGG | - | tig0016349:11516-11535 | Msa1358550:CDS | 40.0% | |
| CTTGGTGAAGTTGTTCGGTT+TGG | + | tig0016349:10433-10452 | Msa1358550:intergenic | 45.0% | |
| GTGAGCCTTTACCTAGAAGA+AGG | - | tig0016349:10792-10811 | Msa1358550:CDS | 45.0% | |
| TTGCTGCTGTAATGGCTGAA+AGG | - | tig0016349:11116-11135 | Msa1358550:CDS | 45.0% | |
| GGTTCGTGCTACAAATACCT+TGG | - | tig0016349:11270-11289 | Msa1358550:CDS | 45.0% | |
| ! | CGACATCGATCGAATTTTGC+GGG | - | tig0016349:11339-11358 | Msa1358550:CDS | 45.0% |
| !! | GAAATGGGTTGTGGGAGAAA+AGG | - | tig0016349:11459-11478 | Msa1358550:CDS | 45.0% |
| !! | GTGGGAGAAAAGGTTGATAG+TGG | - | tig0016349:11469-11488 | Msa1358550:CDS | 45.0% |
| CTGTTCTTCAGAAGCCTGTT+AGG | - | tig0016349:11515-11534 | Msa1358550:CDS | 45.0% | |
| CTTGGTGAAGTTGTTCGGTT+TGG | + | tig0016349:10433-10452 | Msa1358550:intergenic | 45.0% | |
| GTGAGCCTTTACCTAGAAGA+AGG | - | tig0016349:10792-10811 | Msa1358550:CDS | 45.0% | |
| TTGCTGCTGTAATGGCTGAA+AGG | - | tig0016349:11116-11135 | Msa1358550:CDS | 45.0% | |
| GGTTCGTGCTACAAATACCT+TGG | - | tig0016349:11270-11289 | Msa1358550:CDS | 45.0% | |
| ! | CGACATCGATCGAATTTTGC+GGG | - | tig0016349:11339-11358 | Msa1358550:CDS | 45.0% |
| !! | GAAATGGGTTGTGGGAGAAA+AGG | - | tig0016349:11459-11478 | Msa1358550:CDS | 45.0% |
| !! | GTGGGAGAAAAGGTTGATAG+TGG | - | tig0016349:11469-11488 | Msa1358550:CDS | 45.0% |
| CTGTTCTTCAGAAGCCTGTT+AGG | - | tig0016349:11515-11534 | Msa1358550:CDS | 45.0% | |
| ! | ATCGATCGAATTTTGCGGGC+TGG | - | tig0016349:11343-11362 | Msa1358550:CDS | 50.0% |
| ! | ATCGATCGAATTTTGCGGGC+TGG | - | tig0016349:11343-11362 | Msa1358550:CDS | 50.0% |
| !!! | GATCGAATTTTGCGGGCTGG+TGG | - | tig0016349:11346-11365 | Msa1358550:CDS | 55.0% |
| !!! | TGCGGGCTGGTGGTTTGTTT+TGG | - | tig0016349:11356-11375 | Msa1358550:CDS | 55.0% |
| !!! | GATCGAATTTTGCGGGCTGG+TGG | - | tig0016349:11346-11365 | Msa1358550:CDS | 55.0% |
| !!! | TGCGGGCTGGTGGTTTGTTT+TGG | - | tig0016349:11356-11375 | Msa1358550:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016349 | gene | 10278 | 11543 | 10278 | ID=Msa1358550;Name=Msa1358550 |
| tig0016349 | mRNA | 10278 | 11543 | 10278 | ID=Msa1358550-mRNA-1;Parent=Msa1358550;Name=Msa1358550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|421 |
| tig0016349 | exon | 10278 | 11543 | 10278 | ID=Msa1358550-mRNA-1:exon:10912;Parent=Msa1358550-mRNA-1 |
| tig0016349 | CDS | 10278 | 11543 | 10278 | ID=Msa1358550-mRNA-1:cds;Parent=Msa1358550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
