AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1156830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156830 MtrunA17_Chr7g0250541 96.094 384 7 2 1 382 1 378 0.0 715
Msa1156830 MtrunA17_Chr8g0335461 64.194 391 108 10 1 380 1 370 1.21e-113 336
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1156830 AT4G17520.1 45.874 412 138 13 1 380 1 359 3.01e-90 276
Msa1156830 AT4G16830.1 49.749 398 141 12 1 382 1 355 9.27e-63 205
Msa1156830 AT4G16830.2 62.338 231 75 6 154 382 45 265 4.97e-55 182
Msa1156830 AT4G16830.3 63.636 220 69 5 164 382 136 345 2.14e-54 183
Msa1156830 AT5G47210.1 46.582 395 158 11 1 380 1 357 4.45e-54 182
Msa1156830 AT5G47210.3 47.130 331 130 8 1 317 1 300 4.69e-45 157
Msa1156830 AT5G47210.2 43.431 274 114 6 1 261 1 246 3.89e-22 95.9

Find 189 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGAAATCTTTGCTAAAT+TGG 0.161046 7_4:-45365978 Msa1156830:intron
ACCGCGTCCTCCTTCATTTC+TGG 0.193263 7_4:+45367406 None:intergenic
AAAATGTCAAACGCGATAAA+AGG 0.219849 7_4:+45364862 None:intergenic
GGAAAAGAACTATTACTAAT+TGG 0.258411 7_4:-45364969 Msa1156830:three_prime_UTR
GAATGAAGATGAAAAGAATT+TGG 0.259146 7_4:-45366778 Msa1156830:CDS
TCAACAAAGAAATACCTTCT+TGG 0.271936 7_4:+45365794 None:intergenic
AAGGTGCTGGAAGGGGTAAC+TGG 0.292242 7_4:-45366958 Msa1156830:CDS
ATGGTTTAAAATGTAAATTT+AGG 0.296329 7_4:-45364925 Msa1156830:three_prime_UTR
ATAACTCAGGTGGGCGCGGC+AGG 0.304314 7_4:-45365193 Msa1156830:CDS
GTGGCGTTCAAATGTTCTTC+GGG 0.315882 7_4:+45367109 None:intergenic
AAAATCCAACGTTGGAGATT+AGG 0.323535 7_4:-45369007 Msa1156830:five_prime_UTR
CAAACGCGATAAAAGGATAA+AGG 0.330249 7_4:+45364869 None:intergenic
CGTGGAGGTGACCGCGGATT+TGG 0.332778 7_4:-45367338 Msa1156830:CDS
GCAGGAGGGGTGGGCTTAGA+AGG 0.335295 7_4:+45368609 None:intergenic
CGGACATTTACCTTGTCTTC+AGG 0.339881 7_4:+45366675 None:intergenic
GGACGCGGTGGTCGTGGATT+TGG 0.345496 7_4:-45367392 Msa1156830:CDS
GGTGGGCGCGGCAGGGGACG+TGG 0.346207 7_4:-45365185 Msa1156830:CDS
CGAGGAGGTGACCGTGGGTT+TGG 0.347074 7_4:-45367365 Msa1156830:CDS
GACAATTCGTTCCCTGCCTC+TGG 0.379230 7_4:-45367269 Msa1156830:CDS
GAAAGGTGCTGTCAAGGAAC+AGG 0.384698 7_4:-45368658 Msa1156830:CDS
GGTCGTGGAGGTCGTGGTTT+CGG 0.384827 7_4:-45367311 Msa1156830:CDS
AAGTTTAACACACGAGCGTC+AGG 0.385303 7_4:+45368830 None:intergenic
TGTGGCGTTCAAATGTTCTT+CGG 0.385315 7_4:+45367108 None:intergenic
GAAAGTCATCACAACATTCA+TGG 0.386632 7_4:+45364491 None:intergenic
GATAGAGATCGGAGAGAGAA+GGG 0.395916 7_4:+45368895 None:intergenic
AACTCAGGTGGGCGCGGCAG+GGG 0.400573 7_4:-45365191 Msa1156830:CDS
AATGAAGATGAAAAGAATTT+GGG 0.402155 7_4:-45366777 Msa1156830:CDS
GGCAACAACGCAGGCTTGTT+AGG 0.403213 7_4:+45368630 None:intergenic
CTCTGGAGCCCCTGAAAACC+AGG 0.412435 7_4:-45367252 Msa1156830:CDS
CGCGGATTTGGTGGTGGTCG+TGG 0.419320 7_4:-45367326 Msa1156830:CDS
ATTGTCTTTCTTGCACGATA+AGG 0.419547 7_4:+45366000 None:intergenic
CCCGGGCATTTCCCTACCTT+GGG 0.419782 7_4:-45365071 Msa1156830:CDS
TGTGGGGAAAATAAGTTAAA+TGG 0.420875 7_4:-45364721 Msa1156830:three_prime_UTR
CGCCACAGTGGCACTGGGCG+AGG 0.422652 7_4:-45367092 Msa1156830:CDS
TTTGAACGCCACAGTGGCAC+TGG 0.427150 7_4:-45367098 Msa1156830:CDS
ACCAATCCATTTGATTTGCT+TGG 0.429081 7_4:-45368756 Msa1156830:CDS
TGCCAATGAAGCTGAAGAAA+AGG 0.431523 7_4:-45366700 Msa1156830:CDS
TCCCGGGCATTTCCCTACCT+TGG 0.433639 7_4:-45365072 Msa1156830:CDS
TACCAAGTGTTGGTAGAATC+AGG 0.436570 7_4:-45364620 Msa1156830:three_prime_UTR
TAGTGGGATTCTCCTTCAGC+TGG 0.436928 7_4:+45365215 None:intergenic
TTCTCTCTCTCATTGCGGCT+AGG 0.437746 7_4:-45368939 Msa1156830:five_prime_UTR
GACCTATCTCCTTCTTCAAC+AGG 0.439208 7_4:+45367227 None:intergenic
TCTCTCTCTCATTGCGGCTA+GGG 0.441088 7_4:-45368938 Msa1156830:five_prime_UTR
AGATAGAGATCGGAGAGAGA+AGG 0.441274 7_4:+45368894 None:intergenic
GCAACATCAGTTTCAGCTGC+AGG 0.441395 7_4:+45366744 None:intergenic
TTTGTTCTAGGGAGCTGATA+AGG 0.443719 7_4:-45365853 Msa1156830:intron
TAAGCCCACCCCTCCTGCTC+AGG 0.444564 7_4:-45368604 Msa1156830:CDS
CATTCTATTAAAAGTGTTGT+GGG 0.446461 7_4:-45364738 Msa1156830:three_prime_UTR
TGCTGTGGTTGGTATAATGT+GGG 0.448191 7_4:-45364684 Msa1156830:three_prime_UTR
GAAGGAGGACGCGGTGGTCG+TGG 0.449410 7_4:-45367398 Msa1156830:CDS
GGCAGGGGACGTGGTGGCCG+TGG 0.451352 7_4:-45365176 Msa1156830:CDS
GACCGTGGGTTTGGTGGACG+TGG 0.453802 7_4:-45367356 Msa1156830:CDS
GATTTCAAGCGTGAAGGTGC+TGG 0.455572 7_4:-45366971 Msa1156830:CDS
AACCATAAAATAAAATTAGC+AGG 0.456842 7_4:+45364942 None:intergenic
AAACGCGATAAAAGGATAAA+GGG 0.457429 7_4:+45364870 None:intergenic
ACAGCACCTTTCTTAGCAGC+AGG 0.463975 7_4:+45368669 None:intergenic
GGTACACGAGGAGGAGGAGG+AGG 0.464562 7_4:-45365155 Msa1156830:CDS
TCTAAAGACTGAAGAGAGAA+AGG 0.467642 7_4:-45366053 Msa1156830:CDS
TAGGACAGATATCCGCGAAA+AGG 0.472830 7_4:+45365036 None:intergenic
GGGCGCGGCAGGGGACGTGG+TGG 0.473954 7_4:-45365182 Msa1156830:CDS
TTGAAATTCTCTGCTGTGGT+TGG 0.480508 7_4:-45364695 Msa1156830:three_prime_UTR
CACTATAACTCAGGTGGGCG+CGG 0.482966 7_4:-45365197 Msa1156830:CDS
AGGTGCTGGAAGGGGTAACT+GGG 0.486716 7_4:-45366957 Msa1156830:CDS
CCAGCCTGAGCAGGAGGGGT+GGG 0.487178 7_4:+45368600 None:intergenic
AGGACAGATATCCGCGAAAA+GGG 0.487845 7_4:+45365037 None:intergenic
GGCCGTGGTACACGAGGAGG+AGG 0.488513 7_4:-45365161 Msa1156830:CDS
GTGAGGGAGTCCAGAAATGA+AGG 0.488997 7_4:-45367416 Msa1156830:CDS
CCCACCCCTCCTGCTCAGGC+TGG 0.492831 7_4:-45368600 Msa1156830:intron
CGTGGTACACGAGGAGGAGG+AGG 0.493384 7_4:-45365158 Msa1156830:CDS
GCTCCATCCATTGAAGATCC+CGG 0.493448 7_4:-45365089 Msa1156830:CDS
GATAAAAGGATAAAGGGAAA+TGG 0.493647 7_4:+45364876 None:intergenic
GGTGGTGGTCGTGGAGGTCG+TGG 0.494148 7_4:-45367317 Msa1156830:CDS
CTGCTGTGGTTGGTATAATG+TGG 0.498774 7_4:-45364685 Msa1156830:three_prime_UTR
CGCGGTGGTCGTGGATTTGG+TGG 0.500708 7_4:-45367389 Msa1156830:CDS
GCTCCTCCTGCTGCTAAGAA+AGG 0.502941 7_4:-45368675 Msa1156830:CDS
TCATCACCAAGCAAATCAAA+TGG 0.503221 7_4:+45368750 None:intergenic
GAAATGCCCGGGATCTTCAA+TGG 0.504140 7_4:+45365082 None:intergenic
CTCCTTCTTCAACAGGACCC+TGG 0.505621 7_4:+45367234 None:intergenic
CGAGCGTCAGGGTTGAAACT+AGG 0.505698 7_4:+45368842 None:intergenic
GCATTCTATTAAAAGTGTTG+TGG 0.509110 7_4:-45364739 Msa1156830:three_prime_UTR
CTCCATCCATTGAAGATCCC+GGG 0.514613 7_4:-45365088 Msa1156830:CDS
ACCAAGCAAATCAAATGGAT+TGG 0.515642 7_4:+45368755 None:intergenic
CAAGGAAGAGAAAGCCAAGA+AGG 0.520620 7_4:-45365808 Msa1156830:intron
GGAGGTGACCGTGGGTTTGG+TGG 0.523532 7_4:-45367362 Msa1156830:CDS
TTCACTTGGCACCCAAGGTA+GGG 0.526649 7_4:+45365060 None:intergenic
TGTTGTTTCAAAGAAGAAGA+TGG 0.527109 7_4:-45368784 Msa1156830:exon
AGGGCTATCCTTGTTCCCTT+CGG 0.527296 7_4:+45366722 None:intergenic
TCAGCAACGATGAGCTGAGA+AGG 0.527576 7_4:+45368717 None:intergenic
AACCAGGGTCCTGTTGAAGA+AGG 0.528755 7_4:-45367236 Msa1156830:CDS
GTTCACTTGGCACCCAAGGT+AGG 0.529838 7_4:+45365059 None:intergenic
ATCCGCGAAAAGGGTTCACT+TGG 0.532192 7_4:+45365046 None:intergenic
TTTCTTCAGCTTCATTGGCA+GGG 0.532201 7_4:+45366703 None:intergenic
CAAGCGTGAAGGTGCTGGAA+GGG 0.532787 7_4:-45366966 Msa1156830:CDS
CTTGCACGATAAGGCCTGCA+TGG 0.533336 7_4:+45366009 None:intergenic
GGAGGTGACCGCGGATTTGG+TGG 0.534801 7_4:-45367335 Msa1156830:CDS
GGAGGAGGAGGAGGTTTCCG+TGG 0.535610 7_4:-45365134 Msa1156830:CDS
ACCCAAGGTAGGGAAATGCC+CGG 0.536594 7_4:+45365070 None:intergenic
GTGGTTGAAATTCTCTGCTG+TGG 0.538844 7_4:-45364699 Msa1156830:three_prime_UTR
CATTGCTGTACGAATTTCCA+CGG 0.539202 7_4:+45365117 None:intergenic
CAAATCAAATGGATTGGTAG+TGG 0.541449 7_4:+45368761 None:intergenic
ACCAGCCTGAGCAGGAGGGG+TGG 0.542144 7_4:+45368599 None:intergenic
GGAGGAATATGAGAAAGTGC+TGG 0.543378 7_4:-45366101 Msa1156830:CDS
GGTTTCAACAATGGTGATGC+TGG 0.543510 7_4:-45367146 Msa1156830:CDS
AGTAACTAACCAGCCTGAGC+AGG 0.543544 7_4:+45368591 None:intergenic
TTTCAGGGGCTCCAGAGGCA+GGG 0.547403 7_4:+45367258 None:intergenic
TGCTAAGAAAGGTGCTGTCA+AGG 0.548413 7_4:-45368664 Msa1156830:CDS
GGTGACCGCGGATTTGGTGG+TGG 0.550256 7_4:-45367332 Msa1156830:CDS
TGCCCGGGATCTTCAATGGA+TGG 0.552833 7_4:+45365086 None:intergenic
AACTAACCAGCCTGAGCAGG+AGG 0.555781 7_4:+45368594 None:intergenic
GCCACAGTGGCACTGGGCGA+GGG 0.557182 7_4:-45367091 Msa1156830:intron
TGATGTTGCCGAAGGGAACA+AGG 0.558851 7_4:-45366730 Msa1156830:CDS
AAGCGTGAAGGTGCTGGAAG+GGG 0.559364 7_4:-45366965 Msa1156830:CDS
GGAGAATCCCACTATAACTC+AGG 0.564061 7_4:-45365206 Msa1156830:CDS
GGATCTTCAATGGATGGAGC+AGG 0.564280 7_4:+45365092 None:intergenic
CTAACCAGCCTGAGCAGGAG+GGG 0.565343 7_4:+45368596 None:intergenic
GGTGGACGAGGAGGTGACCG+TGG 0.565956 7_4:-45367371 Msa1156830:CDS
CGTGGTGGCCGTGGTACACG+AGG 0.566001 7_4:-45365167 Msa1156830:CDS
AAGGGTTCACTTGGCACCCA+AGG 0.569458 7_4:+45365055 None:intergenic
TGGTTATTAGGAAATGACTC+TGG 0.572820 7_4:-45366122 Msa1156830:intron
GGCAACCTAATCTCCAACGT+TGG 0.574091 7_4:+45369002 None:intergenic
GGTCGTGGATTTGGTGGACG+AGG 0.574276 7_4:-45367383 Msa1156830:CDS
AATGGTGATGCTGGTGAAGA+GGG 0.574768 7_4:-45367137 Msa1156830:CDS
TCCAGAAATGAAGGAGGACG+CGG 0.577100 7_4:-45367407 Msa1156830:CDS
TGTCATCATTTGAGTAGTCA+CGG 0.582804 7_4:+45367288 None:intergenic
TCCTCAGAAAGACGTAGCTA+TGG 0.583882 7_4:-45367206 Msa1156830:CDS
GAGTTTCTGAAGCCAGCTGA+AGG 0.586502 7_4:-45365227 Msa1156830:CDS
ATAAAGGGAAATGGCTGCAA+GGG 0.587652 7_4:+45364885 None:intergenic
TTGAACGCCACAGTGGCACT+GGG 0.588094 7_4:-45367097 Msa1156830:CDS
GTCCTGTTGAAGAAGGAGAT+AGG 0.590241 7_4:-45367229 Msa1156830:CDS
TCAAGCGTGAAGGTGCTGGA+AGG 0.590971 7_4:-45366967 Msa1156830:CDS
CTATCTTCTCCTTCGTACGA+TGG 0.593032 7_4:-45368877 Msa1156830:five_prime_UTR
ACGAAGGAGAAGATAGAGAT+CGG 0.593463 7_4:+45368884 None:intergenic
CCCAAGGTAGGGAAATGCCC+GGG 0.593676 7_4:+45365071 None:intergenic
TCCACGACGACCTCCGCGGT+AGG 0.597333 7_4:+45367169 None:intergenic
TCAGAAAGACGTAGCTATGG+TGG 0.597415 7_4:-45367203 Msa1156830:CDS
AGTGCTGGAAGAGAAAAGAA+AGG 0.598692 7_4:-45366086 Msa1156830:CDS
TGGCGTTCAAATGTTCTTCG+GGG 0.599479 7_4:+45367110 None:intergenic
GATAAAGGGAAATGGCTGCA+AGG 0.601288 7_4:+45364884 None:intergenic
GAATCCCACTATAACTCAGG+TGG 0.602838 7_4:-45365203 Msa1156830:CDS
CAATGGTGATGCTGGTGAAG+AGG 0.603465 7_4:-45367138 Msa1156830:CDS
CTCCTCCTCCTCGTGTACCA+CGG 0.603887 7_4:+45365159 None:intergenic
GTGGACGAGGAGGTGACCGT+GGG 0.604172 7_4:-45367370 Msa1156830:CDS
CCCTACCGCGGAGGTCGTCG+TGG 0.605182 7_4:-45367170 Msa1156830:CDS
CTCCACGTCCACCAAACCCA+CGG 0.606495 7_4:+45367354 None:intergenic
AGCCTGATTCTACCAACACT+TGG 0.610029 7_4:+45364618 None:intergenic
CAGCAACGATGAGCTGAGAA+GGG 0.614728 7_4:+45368718 None:intergenic
GGCTTAGAAGGCAACAACGC+AGG 0.615074 7_4:+45368621 None:intergenic
CGTGGGTTTGGTGGACGTGG+AGG 0.619035 7_4:-45367353 Msa1156830:CDS
AGAAAAGGAGCCTGAAGACA+AGG 0.621218 7_4:-45366685 Msa1156830:intron
TAAAGCATTTGAAACCATGC+AGG 0.622156 7_4:-45366023 Msa1156830:CDS
CGTCGTGGAGGTTTCAACAA+TGG 0.622285 7_4:-45367155 Msa1156830:CDS
CGTGGATTTGGTGGACGAGG+AGG 0.623293 7_4:-45367380 Msa1156830:CDS
GCACCTTTCTTAGCAGCAGG+AGG 0.627026 7_4:+45368672 None:intergenic
GGTGGACGTGGAGGTGACCG+CGG 0.632941 7_4:-45367344 Msa1156830:CDS
TCTCTTTCTCTCTCTCATTG+CGG 0.633265 7_4:-45368944 Msa1156830:five_prime_UTR
CTGAAACTGATGTTGCCGAA+GGG 0.636057 7_4:-45366737 Msa1156830:CDS
AAAGGTGCTGTCAAGGAACA+GGG 0.636405 7_4:-45368657 Msa1156830:CDS
AGTTTAACACACGAGCGTCA+GGG 0.638165 7_4:+45368831 None:intergenic
ACTAACCAGCCTGAGCAGGA+GGG 0.639448 7_4:+45368595 None:intergenic
TTATTAGGAAATGACTCTGG+AGG 0.640664 7_4:-45366119 Msa1156830:intron
AGGGAGTCCAGAAATGAAGG+AGG 0.644058 7_4:-45367413 Msa1156830:CDS
AAATAAATAAAATCCAACGT+TGG 0.648552 7_4:-45369015 Msa1156830:five_prime_UTR
ACCATAGCTACGTCTTTCTG+AGG 0.648642 7_4:+45367205 None:intergenic
ACCCTCGCCCAGTGCCACTG+TGG 0.651721 7_4:+45367090 None:intergenic
CACGACCACCACCAAATCCG+CGG 0.653393 7_4:+45367327 None:intergenic
AATCCCACTATAACTCAGGT+GGG 0.655235 7_4:-45365202 Msa1156830:CDS
GCTGAAACTGATGTTGCCGA+AGG 0.656153 7_4:-45366738 Msa1156830:CDS
TACCGCGGAGGTCGTCGTGG+AGG 0.657139 7_4:-45367167 Msa1156830:CDS
TCTGGAGCCCCTGAAAACCA+GGG 0.658814 7_4:-45367251 Msa1156830:CDS
AGAAACGATTTCAAGCGTGA+AGG 0.659209 7_4:-45366977 Msa1156830:CDS
GGATTTGGTGGTGGTCGTGG+AGG 0.659837 7_4:-45367323 Msa1156830:CDS
ATTCTATTAAAAGTGTTGTG+GGG 0.661064 7_4:-45364737 Msa1156830:three_prime_UTR
AGAAATGAAGGAGGACGCGG+TGG 0.665174 7_4:-45367404 Msa1156830:CDS
GCGCAAAGAGGCTTATGACA+AGG 0.666794 7_4:-45365826 Msa1156830:CDS
GGGGAAAATAAGTTAAATGG+TGG 0.667733 7_4:-45364718 Msa1156830:three_prime_UTR
GCTGTGGTTGGTATAATGTG+GGG 0.668701 7_4:-45364683 Msa1156830:three_prime_UTR
GGTGCTGGAAGGGGTAACTG+GGG 0.673151 7_4:-45366956 Msa1156830:CDS
CCACGAGGTCCCTACCGCGG+AGG 0.677303 7_4:-45367179 Msa1156830:CDS
TGATAAGGATAAGCGCAAAG+AGG 0.681220 7_4:-45365838 Msa1156830:CDS
TTTGCTTGGTGATGACGCTG+AGG 0.688473 7_4:-45368742 Msa1156830:CDS
GGACCACGAGGTCCCTACCG+CGG 0.694021 7_4:-45367182 Msa1156830:CDS
GGTGGCCGTGGTACACGAGG+AGG 0.702691 7_4:-45365164 Msa1156830:CDS
AACTCTTTAAGCGAACACAT+AGG 0.703589 7_4:-45369042 None:intergenic
TGAAGTGAGAGAGAAATGCA+CGG 0.714734 7_4:+45368981 None:intergenic
GCATAGTTACCATCGTACGA+AGG 0.715688 7_4:+45368868 None:intergenic
CGTAGCTATGGTGGACCACG+AGG 0.724280 7_4:-45367194 Msa1156830:CDS
AACCTCCACGACGACCTCCG+CGG 0.738924 7_4:+45367165 None:intergenic
AGAACATTTGAACGCCACAG+TGG 0.751248 7_4:-45367104 Msa1156830:CDS
ACAGCAAAGACAATAACACG+CGG 0.802882 7_4:+45368804 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATAAATTCAAAATTA+TGG + chr7_4:45366977-45366996 None:intergenic 10.0%
!!! AATTGTAAATAATCTGTTTT+AGG - chr7_4:45365476-45365495 Msa1156830:intron 15.0%
!! AAGATAAAATAACAATGAAT+TGG - chr7_4:45365584-45365603 Msa1156830:intron 15.0%
!! TTTGTTTACATGTTTATTAT+AGG - chr7_4:45366630-45366649 Msa1156830:intron 15.0%
!!! AATTTTGAATTTATTTTGTC+TGG - chr7_4:45366978-45366997 Msa1156830:CDS 15.0%
!! ACAAAATCAATTCAAAATTA+TGG + chr7_4:45367136-45367155 None:intergenic 15.0%
!!! TTCTTCTGATTTAATTTATT+TGG - chr7_4:45367330-45367349 Msa1156830:CDS 15.0%
!!! ATGATTTTTATTTTACTAAC+TGG - chr7_4:45368231-45368250 Msa1156830:intron 15.0%
!!! ATGGTTTAAAATGTAAATTT+AGG - chr7_4:45368589-45368608 Msa1156830:intron 15.0%
!!! ACGTTGGATTTTATTTATTT+GGG + chr7_4:45364499-45364518 None:intergenic 20.0%
!!! AACGTTGGATTTTATTTATT+TGG + chr7_4:45364500-45364519 None:intergenic 20.0%
!! AAATAAATAAAATCCAACGT+TGG - chr7_4:45364499-45364518 Msa1156830:three_prime_UTR 20.0%
!! TAATATAATATCAGAATCCA+CGG + chr7_4:45364957-45364976 None:intergenic 20.0%
!! TGGATTCTGATATTATATTA+GGG - chr7_4:45364957-45364976 Msa1156830:three_prime_UTR 20.0%
!! TAGGTCATTTATAATAAATC+TGG - chr7_4:45365121-45365140 Msa1156830:CDS 20.0%
!!! AAAGAACCTTGTTATATAAA+TGG + chr7_4:45365984-45366003 None:intergenic 20.0%
!! AAACAAATCATATCATCATA+TGG + chr7_4:45366462-45366481 None:intergenic 20.0%
!!! TTTTCATATTTATTTGCTTG+TGG - chr7_4:45366679-45366698 Msa1156830:intron 20.0%
!! AATGAAGATGAAAAGAATTT+GGG - chr7_4:45366737-45366756 Msa1156830:CDS 20.0%
!!! CTATTGTATAACTATTGATT+AGG + chr7_4:45367590-45367609 None:intergenic 20.0%
!! CAATAGTTATTTATGTTGTA+TGG - chr7_4:45367604-45367623 Msa1156830:intron 20.0%
!! TTATACATACAAAGTAACAA+GGG + chr7_4:45367755-45367774 None:intergenic 20.0%
!!! AGGTAAACCATAATTTTTTT+TGG - chr7_4:45368081-45368100 Msa1156830:intron 20.0%
!!! AAAGCATCCAAAAAAAATTA+TGG + chr7_4:45368091-45368110 None:intergenic 20.0%
!! AACTATCAAAAATCATACAA+TGG + chr7_4:45368186-45368205 None:intergenic 20.0%
!!! TGTATGATTTTTGATAGTTT+TGG - chr7_4:45368187-45368206 Msa1156830:intron 20.0%
!!! GTTTTGGAATGTAATTTTTT+TGG - chr7_4:45368203-45368222 Msa1156830:intron 20.0%
!!! TGGTTTTTCTTTGATTTTAA+TGG - chr7_4:45368511-45368530 Msa1156830:intron 20.0%
!!! TTCCTGCTAATTTTATTTTA+TGG - chr7_4:45368570-45368589 Msa1156830:intron 20.0%
!! AACCATAAAATAAAATTAGC+AGG + chr7_4:45368575-45368594 None:intergenic 20.0%
! GTGGATTCTGATATTATATT+AGG - chr7_4:45364956-45364975 Msa1156830:three_prime_UTR 25.0%
!!! TGAATCTTTTGATTTGTTGT+TGG - chr7_4:45365037-45365056 Msa1156830:three_prime_UTR 25.0%
!!! TCTATCTTTGATGTTTTTGT+AGG - chr7_4:45365102-45365121 Msa1156830:CDS 25.0%
! CTACAAGTTTAGACAATAAT+TGG - chr7_4:45365280-45365299 Msa1156830:intron 25.0%
!! TATGAAGTCATAATTTTCTG+TGG - chr7_4:45365770-45365789 Msa1156830:intron 25.0%
! GTTGTTAAATACAATTTCGA+TGG - chr7_4:45365825-45365844 Msa1156830:CDS 25.0%
! TGTTGTCCATTTATATAACA+AGG - chr7_4:45365975-45365994 Msa1156830:intron 25.0%
!!! ATGTTTTATTTTGACAGTGA+GGG - chr7_4:45366082-45366101 Msa1156830:CDS 25.0%
! TTGTGGTTTATAATTTACTC+AGG - chr7_4:45366696-45366715 Msa1156830:CDS 25.0%
! TGTGGTTTATAATTTACTCA+GGG - chr7_4:45366697-45366716 Msa1156830:CDS 25.0%
! GAATGAAGATGAAAAGAATT+TGG - chr7_4:45366736-45366755 Msa1156830:CDS 25.0%
! TACTGAAATCTTTGCTAAAT+TGG - chr7_4:45367536-45367555 Msa1156830:intron 25.0%
! GTTATACATACAAAGTAACA+AGG + chr7_4:45367756-45367775 None:intergenic 25.0%
! TTGTATGTATAACAACTTCA+TGG - chr7_4:45367763-45367782 Msa1156830:intron 25.0%
! AAACGAGTAAAAAAGAATCA+TGG + chr7_4:45367973-45367992 None:intergenic 25.0%
! GAAAAACCAAAACTGAAAAT+AGG + chr7_4:45368500-45368519 None:intergenic 25.0%
!!! ATTTTAATGGAACTAAAAGC+AGG - chr7_4:45368524-45368543 Msa1156830:intron 25.0%
! GGAAAAGAACTATTACTAAT+TGG - chr7_4:45368545-45368564 Msa1156830:intron 25.0%
!!! CATTCTATTAAAAGTGTTGT+GGG - chr7_4:45368776-45368795 Msa1156830:exon 25.0%
!!! ATTCTATTAAAAGTGTTGTG+GGG - chr7_4:45368777-45368796 Msa1156830:exon 25.0%
!! TGTTGTTTCAAAGAAGAAGA+TGG - chr7_4:45364730-45364749 Msa1156830:three_prime_UTR 30.0%
TCATAGTCAATAAGCATGTT+TGG + chr7_4:45365755-45365774 None:intergenic 30.0%
!!! GTTGGTTTCTTACTTTTTGT+TGG - chr7_4:45365799-45365818 Msa1156830:intron 30.0%
AAACACAAATTTCAACTGAC+TGG + chr7_4:45365899-45365918 None:intergenic 30.0%
!! ATAGCATTGAGCATTTTGTT+CGG - chr7_4:45365935-45365954 Msa1156830:intron 30.0%
!!! ATGCTGTACTGTTTTTTGAA+TGG - chr7_4:45366006-45366025 Msa1156830:CDS 30.0%
!!! GATGTTTTATTTTGACAGTG+AGG - chr7_4:45366081-45366100 Msa1156830:CDS 30.0%
CAAATAATCGCATGATTGTT+TGG + chr7_4:45366925-45366944 None:intergenic 30.0%
AACTTTCAGACACTTGAAAA+AGG + chr7_4:45367173-45367192 None:intergenic 30.0%
! ACTTAAGCATTGCATATCTT+TGG - chr7_4:45367212-45367231 Msa1156830:CDS 30.0%
!! TAACCTTGTTGTTTCTTATG+AGG - chr7_4:45367235-45367254 Msa1156830:CDS 30.0%
! AAATCAGAAGAAAGTACGAT+TGG + chr7_4:45367322-45367341 None:intergenic 30.0%
TCAACAAAGAAATACCTTCT+TGG + chr7_4:45367723-45367742 None:intergenic 30.0%
AAAACACCATTGTTCCATAT+AGG - chr7_4:45367858-45367877 Msa1156830:intron 30.0%
AAACACCATTGTTCCATATA+GGG - chr7_4:45367859-45367878 Msa1156830:intron 30.0%
GTGCTTGCTTAATTATTATC+TGG - chr7_4:45368128-45368147 Msa1156830:intron 30.0%
TAATTATTATCTGGCATCTC+TGG - chr7_4:45368137-45368156 Msa1156830:intron 30.0%
! ATCTGTCCTATTTTCAGTTT+TGG - chr7_4:45368491-45368510 Msa1156830:intron 30.0%
GATAAAAGGATAAAGGGAAA+TGG + chr7_4:45368641-45368660 None:intergenic 30.0%
AAACGCGATAAAAGGATAAA+GGG + chr7_4:45368647-45368666 None:intergenic 30.0%
AAAATGTCAAACGCGATAAA+AGG + chr7_4:45368655-45368674 None:intergenic 30.0%
! TTATCGCGTTTGACATTTTT+CGG - chr7_4:45368656-45368675 Msa1156830:CDS 30.0%
!! GCATTCTATTAAAAGTGTTG+TGG - chr7_4:45368775-45368794 Msa1156830:exon 30.0%
TGTGGGGAAAATAAGTTAAA+TGG - chr7_4:45368793-45368812 Msa1156830:five_prime_UTR 30.0%
AAAATCCAACGTTGGAGATT+AGG - chr7_4:45364507-45364526 Msa1156830:three_prime_UTR 35.0%
!! CAAATCAAATGGATTGGTAG+TGG + chr7_4:45364756-45364775 None:intergenic 35.0%
!! ACCAATCCATTTGATTTGCT+TGG - chr7_4:45364758-45364777 Msa1156830:three_prime_UTR 35.0%
ACCAAGCAAATCAAATGGAT+TGG + chr7_4:45364762-45364781 None:intergenic 35.0%
TCATCACCAAGCAAATCAAA+TGG + chr7_4:45364767-45364786 None:intergenic 35.0%
!! TTAGTTACTGTTTTGTTCCG+TGG - chr7_4:45364937-45364956 Msa1156830:three_prime_UTR 35.0%
GTGTGATTGATAGAACACTA+TGG - chr7_4:45365323-45365342 Msa1156830:intron 35.0%
ATGTAGCAACCTCAGTTAAT+GGG - chr7_4:45365359-45365378 Msa1156830:intron 35.0%
!! AATCTGTTTTAGGTCCTGTT+TGG - chr7_4:45365486-45365505 Msa1156830:intron 35.0%
GTTTATCCAAACATCCAAAC+AGG + chr7_4:45365503-45365522 None:intergenic 35.0%
ATAGCACAAGCGTTTATCAT+AGG - chr7_4:45365540-45365559 Msa1156830:intron 35.0%
GTCAATAAGCATGTTTGGAT+TGG + chr7_4:45365750-45365769 None:intergenic 35.0%
!! AATTTTCTGTGGTTAGCTGT+TGG - chr7_4:45365781-45365800 Msa1156830:intron 35.0%
TGTCATCATTTGAGTAGTCA+CGG + chr7_4:45366229-45366248 None:intergenic 35.0%
! TGGTTGGTCATTTAAACAGT+AGG + chr7_4:45366905-45366924 None:intergenic 35.0%
TAATCGCATGATTGTTTGGT+TGG + chr7_4:45366921-45366940 None:intergenic 35.0%
GCAAAGAAGACACTTGAAAA+TGG + chr7_4:45367014-45367033 None:intergenic 35.0%
GTTGTTGCATTCTCTAAGTT+TGG - chr7_4:45367035-45367054 Msa1156830:intron 35.0%
TGAAAAAGGTGAAGCAATAC+TGG + chr7_4:45367159-45367178 None:intergenic 35.0%
!!! CTGTTTTTGTTGTTGCTGAT+TGG - chr7_4:45367372-45367391 Msa1156830:CDS 35.0%
! GTTGTTGCTGATTGGTTATT+AGG - chr7_4:45367380-45367399 Msa1156830:CDS 35.0%
TGGTTATTAGGAAATGACTC+TGG - chr7_4:45367392-45367411 Msa1156830:CDS 35.0%
TTATTAGGAAATGACTCTGG+AGG - chr7_4:45367395-45367414 Msa1156830:CDS 35.0%
TCTAAAGACTGAAGAGAGAA+AGG - chr7_4:45367461-45367480 Msa1156830:intron 35.0%
! TAAAGCATTTGAAACCATGC+AGG - chr7_4:45367491-45367510 Msa1156830:intron 35.0%
ATTGTCTTTCTTGCACGATA+AGG + chr7_4:45367517-45367536 None:intergenic 35.0%
TGCACTTCTATCTTTGTTCT+AGG - chr7_4:45367649-45367668 Msa1156830:intron 35.0%
GCACTTCTATCTTTGTTCTA+GGG - chr7_4:45367650-45367669 Msa1156830:intron 35.0%
TTGTCAAATAGCGACTATAG+TGG - chr7_4:45367807-45367826 Msa1156830:intron 35.0%
TGTCAAATAGCGACTATAGT+GGG - chr7_4:45367808-45367827 Msa1156830:intron 35.0%
CCATATTCTGCTACGTTATA+AGG + chr7_4:45367834-45367853 None:intergenic 35.0%
CCTTATAACGTAGCAGAATA+TGG - chr7_4:45367831-45367850 Msa1156830:intron 35.0%
ATATAGGGTGCAAGTACATA+GGG - chr7_4:45367874-45367893 Msa1156830:intron 35.0%
CAAACGCGATAAAAGGATAA+AGG + chr7_4:45368648-45368667 None:intergenic 35.0%
! TATCGCGTTTGACATTTTTC+GGG - chr7_4:45368657-45368676 Msa1156830:CDS 35.0%
!!! TTTGACATTTTTCGGGGAAA+TGG - chr7_4:45368664-45368683 Msa1156830:CDS 35.0%
GGGGAAAATAAGTTAAATGG+TGG - chr7_4:45368796-45368815 Msa1156830:five_prime_UTR 35.0%
!!! GGATTTACAAGTGTTTTAGC+AGG - chr7_4:45368852-45368871 Msa1156830:five_prime_UTR 35.0%
!! ATTTTTCAGCTACCAAGTGT+TGG - chr7_4:45368884-45368903 Msa1156830:five_prime_UTR 35.0%
GAAAGTCATCACAACATTCA+TGG + chr7_4:45369026-45369045 None:intergenic 35.0%
TGAAGTGAGAGAGAAATGCA+CGG + chr7_4:45364536-45364555 None:intergenic 40.0%
TCTCTTTCTCTCTCTCATTG+CGG - chr7_4:45364570-45364589 Msa1156830:three_prime_UTR 40.0%
ACGAAGGAGAAGATAGAGAT+CGG + chr7_4:45364633-45364652 None:intergenic 40.0%
ACAGCAAAGACAATAACACG+CGG + chr7_4:45364713-45364732 None:intergenic 40.0%
CATGTAGCAACCTCAGTTAA+TGG - chr7_4:45365358-45365377 Msa1156830:intron 40.0%
CAACCTCAGTTAATGGGATA+AGG - chr7_4:45365365-45365384 Msa1156830:intron 40.0%
! AAGCCTTATCCCATTAACTG+AGG + chr7_4:45365371-45365390 None:intergenic 40.0%
TCAGTTAATGGGATAAGGCT+TGG - chr7_4:45365370-45365389 Msa1156830:intron 40.0%
ATGCATGTTGAGAAGAACAG+AGG - chr7_4:45365430-45365449 Msa1156830:intron 40.0%
TGCATGTTGAGAAGAACAGA+GGG - chr7_4:45365431-45365450 Msa1156830:intron 40.0%
TTAGGTCCTGTTTGGATGTT+TGG - chr7_4:45365494-45365513 Msa1156830:intron 40.0%
GCTTATTTCAGCTTGTCTAC+GGG + chr7_4:45365728-45365747 None:intergenic 40.0%
GGCTTATTTCAGCTTGTCTA+CGG + chr7_4:45365729-45365748 None:intergenic 40.0%
CAAATTTCAACTGACTGGAC+TGG + chr7_4:45365894-45365913 None:intergenic 40.0%
TGTGGCGTTCAAATGTTCTT+CGG + chr7_4:45366409-45366428 None:intergenic 40.0%
AGAAACGATTTCAAGCGTGA+AGG - chr7_4:45366537-45366556 Msa1156830:intron 40.0%
TTTCTTCAGCTTCATTGGCA+GGG + chr7_4:45366814-45366833 None:intergenic 40.0%
! TTTTCTTCAGCTTCATTGGC+AGG + chr7_4:45366815-45366834 None:intergenic 40.0%
TGCCAATGAAGCTGAAGAAA+AGG - chr7_4:45366814-45366833 Msa1156830:intron 40.0%
! CTCCTTTTCTTCAGCTTCAT+TGG + chr7_4:45366819-45366838 None:intergenic 40.0%
ACTGTTGCATTCTCCAAGTT+TGG - chr7_4:45366873-45366892 Msa1156830:intron 40.0%
CAGTAGGAAAACACCAAACT+TGG + chr7_4:45366889-45366908 None:intergenic 40.0%
GCACCTCATAAGAAACAACA+AGG + chr7_4:45367241-45367260 None:intergenic 40.0%
TGTTTCTTATGAGGTGCACT+TGG - chr7_4:45367244-45367263 Msa1156830:CDS 40.0%
GTGCACTTGGTTATTTGCAA+AGG - chr7_4:45367257-45367276 Msa1156830:CDS 40.0%
! AGTGCTGGAAGAGAAAAGAA+AGG - chr7_4:45367428-45367447 Msa1156830:intron 40.0%
!! TTTGTTCTAGGGAGCTGATA+AGG - chr7_4:45367661-45367680 Msa1156830:intron 40.0%
TGATAAGGATAAGCGCAAAG+AGG - chr7_4:45367676-45367695 Msa1156830:intron 40.0%
TTGCACCCTATATGGAACAA+TGG + chr7_4:45367867-45367886 None:intergenic 40.0%
CTATGTACTTGCACCCTATA+TGG + chr7_4:45367875-45367894 None:intergenic 40.0%
CATATAGGGTGCAAGTACAT+AGG - chr7_4:45367873-45367892 Msa1156830:intron 40.0%
TCTAGTAACCATTGCCTTCT+TGG - chr7_4:45368056-45368075 Msa1156830:intron 40.0%
CTAGTAACCATTGCCTTCTT+GGG - chr7_4:45368057-45368076 Msa1156830:intron 40.0%
TATGGTTTACCTTCCCAAGA+AGG + chr7_4:45368073-45368092 None:intergenic 40.0%
AATCCCACTATAACTCAGGT+GGG - chr7_4:45368312-45368331 Msa1156830:intron 40.0%
CATTGCTGTACGAATTTCCA+CGG + chr7_4:45368400-45368419 None:intergenic 40.0%
ATAAAGGGAAATGGCTGCAA+GGG + chr7_4:45368632-45368651 None:intergenic 40.0%
! ATCGCGTTTGACATTTTTCG+GGG - chr7_4:45368658-45368677 Msa1156830:CDS 40.0%
!!! ATTTTTCGGGGAAATGGTTG+CGG - chr7_4:45368670-45368689 Msa1156830:CDS 40.0%
TTGAAATTCTCTGCTGTGGT+TGG - chr7_4:45368819-45368838 Msa1156830:five_prime_UTR 40.0%
! TGCTGTGGTTGGTATAATGT+GGG - chr7_4:45368830-45368849 Msa1156830:five_prime_UTR 40.0%
!! TACCAAGTGTTGGTAGAATC+AGG - chr7_4:45368894-45368913 Msa1156830:five_prime_UTR 40.0%
GATAGAGATCGGAGAGAGAA+GGG + chr7_4:45364622-45364641 None:intergenic 45.0%
AGATAGAGATCGGAGAGAGA+AGG + chr7_4:45364623-45364642 None:intergenic 45.0%
CTATCTTCTCCTTCGTACGA+TGG - chr7_4:45364637-45364656 Msa1156830:three_prime_UTR 45.0%
GCATAGTTACCATCGTACGA+AGG + chr7_4:45364649-45364668 None:intergenic 45.0%
AGTTTAACACACGAGCGTCA+GGG + chr7_4:45364686-45364705 None:intergenic 45.0%
AAGTTTAACACACGAGCGTC+AGG + chr7_4:45364687-45364706 None:intergenic 45.0%
!! TGCTAAGAAAGGTGCTGTCA+AGG - chr7_4:45364850-45364869 Msa1156830:three_prime_UTR 45.0%
!! AAAGGTGCTGTCAAGGAACA+GGG - chr7_4:45364857-45364876 Msa1156830:three_prime_UTR 45.0%
GTCCTGTTGAAGAAGGAGAT+AGG - chr7_4:45366285-45366304 Msa1156830:intron 45.0%
GACCTATCTCCTTCTTCAAC+AGG + chr7_4:45366290-45366309 None:intergenic 45.0%
TCCTCAGAAAGACGTAGCTA+TGG - chr7_4:45366308-45366327 Msa1156830:intron 45.0%
ACCATAGCTACGTCTTTCTG+AGG + chr7_4:45366312-45366331 None:intergenic 45.0%
TCAGAAAGACGTAGCTATGG+TGG - chr7_4:45366311-45366330 Msa1156830:intron 45.0%
! GGTTTCAACAATGGTGATGC+TGG - chr7_4:45366368-45366387 Msa1156830:intron 45.0%
! AATGGTGATGCTGGTGAAGA+GGG - chr7_4:45366377-45366396 Msa1156830:intron 45.0%
TGGCGTTCAAATGTTCTTCG+GGG + chr7_4:45366407-45366426 None:intergenic 45.0%
GTGGCGTTCAAATGTTCTTC+GGG + chr7_4:45366408-45366427 None:intergenic 45.0%
AGAACATTTGAACGCCACAG+TGG - chr7_4:45366410-45366429 Msa1156830:intron 45.0%
CTGAAACTGATGTTGCCGAA+GGG - chr7_4:45366777-45366796 Msa1156830:CDS 45.0%
AGAAAAGGAGCCTGAAGACA+AGG - chr7_4:45366829-45366848 Msa1156830:intron 45.0%
CGGACATTTACCTTGTCTTC+AGG + chr7_4:45366842-45366861 None:intergenic 45.0%
TGCAACAGTACGAATGGAGA+CGG + chr7_4:45366862-45366881 None:intergenic 45.0%
GGAGAATGCAACAGTACGAA+TGG + chr7_4:45366868-45366887 None:intergenic 45.0%
! GGAGGAATATGAGAAAGTGC+TGG - chr7_4:45367413-45367432 Msa1156830:CDS 45.0%
CAAGGAAGAGAAAGCCAAGA+AGG - chr7_4:45367706-45367725 Msa1156830:intron 45.0%
! CTCGTTTTGTGTGACGATCA+AGG - chr7_4:45367986-45368005 Msa1156830:intron 45.0%
TAACCATTGCCTTCTTGGGA+AGG - chr7_4:45368061-45368080 Msa1156830:intron 45.0%
TTACCTTCCCAAGAAGGCAA+TGG + chr7_4:45368067-45368086 None:intergenic 45.0%
GGAGAATCCCACTATAACTC+AGG - chr7_4:45368308-45368327 Msa1156830:intron 45.0%
GAATCCCACTATAACTCAGG+TGG - chr7_4:45368311-45368330 Msa1156830:intron 45.0%
AGGACAGATATCCGCGAAAA+GGG + chr7_4:45368480-45368499 None:intergenic 45.0%
TAGGACAGATATCCGCGAAA+AGG + chr7_4:45368481-45368500 None:intergenic 45.0%
GATAAAGGGAAATGGCTGCA+AGG + chr7_4:45368633-45368652 None:intergenic 45.0%
!!! TTTTTCGGGGAAATGGTTGC+GGG - chr7_4:45368671-45368690 Msa1156830:CDS 45.0%
GTGGTTGAAATTCTCTGCTG+TGG - chr7_4:45368815-45368834 Msa1156830:five_prime_UTR 45.0%
! CTGCTGTGGTTGGTATAATG+TGG - chr7_4:45368829-45368848 Msa1156830:five_prime_UTR 45.0%
! GCTGTGGTTGGTATAATGTG+GGG - chr7_4:45368831-45368850 Msa1156830:five_prime_UTR 45.0%
AGCCTGATTCTACCAACACT+TGG + chr7_4:45368899-45368918 None:intergenic 45.0%
GGCAACCTAATCTCCAACGT+TGG + chr7_4:45364515-45364534 None:intergenic 50.0%
TTCTCTCTCTCATTGCGGCT+AGG - chr7_4:45364575-45364594 Msa1156830:three_prime_UTR 50.0%
TCTCTCTCTCATTGCGGCTA+GGG - chr7_4:45364576-45364595 Msa1156830:three_prime_UTR 50.0%
!! TTTGCTTGGTGATGACGCTG+AGG - chr7_4:45364772-45364791 Msa1156830:three_prime_UTR 50.0%
CAGCAACGATGAGCTGAGAA+GGG + chr7_4:45364799-45364818 None:intergenic 50.0%
TCAGCAACGATGAGCTGAGA+AGG + chr7_4:45364800-45364819 None:intergenic 50.0%
ACAGCACCTTTCTTAGCAGC+AGG + chr7_4:45364848-45364867 None:intergenic 50.0%
!! GAAAGGTGCTGTCAAGGAAC+AGG - chr7_4:45364856-45364875 Msa1156830:three_prime_UTR 50.0%
AGTAACTAACCAGCCTGAGC+AGG + chr7_4:45364926-45364945 None:intergenic 50.0%
TGAGAAGAACAGAGGGCTAG+TGG - chr7_4:45365438-45365457 Msa1156830:intron 50.0%
!!! TGAGCATTTTGTTCGGTGCG+TGG - chr7_4:45365942-45365961 Msa1156830:intron 50.0%
GTGAGGGAGTCCAGAAATGA+AGG - chr7_4:45366098-45366117 Msa1156830:CDS 50.0%
AGGGAGTCCAGAAATGAAGG+AGG - chr7_4:45366101-45366120 Msa1156830:CDS 50.0%
TCCAGAAATGAAGGAGGACG+CGG - chr7_4:45366107-45366126 Msa1156830:CDS 50.0%
!! AACAGGACCCTGGTTTTCAG+GGG + chr7_4:45366273-45366292 None:intergenic 50.0%
!! CAACAGGACCCTGGTTTTCA+GGG + chr7_4:45366274-45366293 None:intergenic 50.0%
!! TCAACAGGACCCTGGTTTTC+AGG + chr7_4:45366275-45366294 None:intergenic 50.0%
AACCAGGGTCCTGTTGAAGA+AGG - chr7_4:45366278-45366297 Msa1156830:intron 50.0%
CGTCGTGGAGGTTTCAACAA+TGG - chr7_4:45366359-45366378 Msa1156830:intron 50.0%
! CAATGGTGATGCTGGTGAAG+AGG - chr7_4:45366376-45366395 Msa1156830:intron 50.0%
! GATTTCAAGCGTGAAGGTGC+TGG - chr7_4:45366543-45366562 Msa1156830:intron 50.0%
GCAACATCAGTTTCAGCTGC+AGG + chr7_4:45366773-45366792 None:intergenic 50.0%
GCTGAAACTGATGTTGCCGA+AGG - chr7_4:45366776-45366795 Msa1156830:CDS 50.0%
TGATGTTGCCGAAGGGAACA+AGG - chr7_4:45366784-45366803 Msa1156830:CDS 50.0%
AGGGCTATCCTTGTTCCCTT+CGG + chr7_4:45366795-45366814 None:intergenic 50.0%
GGACACAGAGCACAGAGAAA+TGG + chr7_4:45367301-45367320 None:intergenic 50.0%
GCGCAAAGAGGCTTATGACA+AGG - chr7_4:45367688-45367707 Msa1156830:intron 50.0%
!! GAGTTTCTGAAGCCAGCTGA+AGG - chr7_4:45368287-45368306 Msa1156830:intron 50.0%
TAGTGGGATTCTCCTTCAGC+TGG + chr7_4:45368302-45368321 None:intergenic 50.0%
GGATCTTCAATGGATGGAGC+AGG + chr7_4:45368425-45368444 None:intergenic 50.0%
GCTCCATCCATTGAAGATCC+CGG - chr7_4:45368425-45368444 Msa1156830:intron 50.0%
CTCCATCCATTGAAGATCCC+GGG - chr7_4:45368426-45368445 Msa1156830:intron 50.0%
GAAATGCCCGGGATCTTCAA+TGG + chr7_4:45368435-45368454 None:intergenic 50.0%
TTCACTTGGCACCCAAGGTA+GGG + chr7_4:45368457-45368476 None:intergenic 50.0%
! TGCCAAGTGAACCCTTTTCG+CGG - chr7_4:45368466-45368485 Msa1156830:intron 50.0%
ATCCGCGAAAAGGGTTCACT+TGG + chr7_4:45368471-45368490 None:intergenic 50.0%
!! TTTTCGGGGAAATGGTTGCG+GGG - chr7_4:45368672-45368691 Msa1156830:CDS 50.0%
CGAGCGTCAGGGTTGAAACT+AGG + chr7_4:45364675-45364694 None:intergenic 55.0%
GCTCCTCCTGCTGCTAAGAA+AGG - chr7_4:45364839-45364858 Msa1156830:three_prime_UTR 55.0%
GCACCTTTCTTAGCAGCAGG+AGG + chr7_4:45364845-45364864 None:intergenic 55.0%
! GGCAACAACGCAGGCTTGTT+AGG + chr7_4:45364887-45364906 None:intergenic 55.0%
GGCTTAGAAGGCAACAACGC+AGG + chr7_4:45364896-45364915 None:intergenic 55.0%
ACTAACCAGCCTGAGCAGGA+GGG + chr7_4:45364922-45364941 None:intergenic 55.0%
AACTAACCAGCCTGAGCAGG+AGG + chr7_4:45364923-45364942 None:intergenic 55.0%
ACCGCGTCCTCCTTCATTTC+TGG + chr7_4:45366111-45366130 None:intergenic 55.0%
AGAAATGAAGGAGGACGCGG+TGG - chr7_4:45366110-45366129 Msa1156830:CDS 55.0%
GACAATTCGTTCCCTGCCTC+TGG - chr7_4:45366245-45366264 Msa1156830:intron 55.0%
! TCTGGAGCCCCTGAAAACCA+GGG - chr7_4:45366263-45366282 Msa1156830:intron 55.0%
CTCCTTCTTCAACAGGACCC+TGG + chr7_4:45366283-45366302 None:intergenic 55.0%
TTTGAACGCCACAGTGGCAC+TGG - chr7_4:45366416-45366435 Msa1156830:intron 55.0%
TTGAACGCCACAGTGGCACT+GGG - chr7_4:45366417-45366436 Msa1156830:intron 55.0%
!! TCAAGCGTGAAGGTGCTGGA+AGG - chr7_4:45366547-45366566 Msa1156830:intron 55.0%
!! CAAGCGTGAAGGTGCTGGAA+GGG - chr7_4:45366548-45366567 Msa1156830:intron 55.0%
!! AAGCGTGAAGGTGCTGGAAG+GGG - chr7_4:45366549-45366568 Msa1156830:intron 55.0%
!! AAGGTGCTGGAAGGGGTAAC+TGG - chr7_4:45366556-45366575 Msa1156830:intron 55.0%
!! AGGTGCTGGAAGGGGTAACT+GGG - chr7_4:45366557-45366576 Msa1156830:intron 55.0%
CTTGCACGATAAGGCCTGCA+TGG + chr7_4:45367508-45367527 None:intergenic 55.0%
GCGCCCACCTGAGTTATAGT+GGG + chr7_4:45368318-45368337 None:intergenic 55.0%
CACTATAACTCAGGTGGGCG+CGG - chr7_4:45368317-45368336 Msa1156830:intron 55.0%
TGCCCGGGATCTTCAATGGA+TGG + chr7_4:45368431-45368450 None:intergenic 55.0%
ACCCAAGGTAGGGAAATGCC+CGG + chr7_4:45368447-45368466 None:intergenic 55.0%
GTTCACTTGGCACCCAAGGT+AGG + chr7_4:45368458-45368477 None:intergenic 55.0%
AAGGGTTCACTTGGCACCCA+AGG + chr7_4:45368462-45368481 None:intergenic 55.0%
CTAACCAGCCTGAGCAGGAG+GGG + chr7_4:45364921-45364940 None:intergenic 60.0%
!! GGTCGTGGATTTGGTGGACG+AGG - chr7_4:45366131-45366150 Msa1156830:intron 60.0%
!! CGTGGATTTGGTGGACGAGG+AGG - chr7_4:45366134-45366153 Msa1156830:intron 60.0%
CTCCACGTCCACCAAACCCA+CGG + chr7_4:45366163-45366182 None:intergenic 60.0%
CACGACCACCACCAAATCCG+CGG + chr7_4:45366190-45366209 None:intergenic 60.0%
!! GGATTTGGTGGTGGTCGTGG+AGG - chr7_4:45366191-45366210 Msa1156830:intron 60.0%
GGTCGTGGAGGTCGTGGTTT+CGG - chr7_4:45366203-45366222 Msa1156830:intron 60.0%
TTTCAGGGGCTCCAGAGGCA+GGG + chr7_4:45366259-45366278 None:intergenic 60.0%
!! TTTTCAGGGGCTCCAGAGGC+AGG + chr7_4:45366260-45366279 None:intergenic 60.0%
!! CTGGTTTTCAGGGGCTCCAG+AGG + chr7_4:45366264-45366283 None:intergenic 60.0%
!! CTCTGGAGCCCCTGAAAACC+AGG - chr7_4:45366262-45366281 Msa1156830:intron 60.0%
!! CGTAGCTATGGTGGACCACG+AGG - chr7_4:45366320-45366339 Msa1156830:intron 60.0%
! GGTGCTGGAAGGGGTAACTG+GGG - chr7_4:45366558-45366577 Msa1156830:intron 60.0%
CGCGCCCACCTGAGTTATAG+TGG + chr7_4:45368319-45368338 None:intergenic 60.0%
CTCCTCCTCCTCGTGTACCA+CGG + chr7_4:45368358-45368377 None:intergenic 60.0%
TCCCGGGCATTTCCCTACCT+TGG - chr7_4:45368442-45368461 Msa1156830:intron 60.0%
CCCAAGGTAGGGAAATGCCC+GGG + chr7_4:45368446-45368465 None:intergenic 60.0%
CCCGGGCATTTCCCTACCTT+GGG - chr7_4:45368443-45368462 Msa1156830:intron 60.0%
! GCAGGAGGGGTGGGCTTAGA+AGG + chr7_4:45364908-45364927 None:intergenic 65.0%
TAAGCCCACCCCTCCTGCTC+AGG - chr7_4:45364910-45364929 Msa1156830:three_prime_UTR 65.0%
GGACGCGGTGGTCGTGGATT+TGG - chr7_4:45366122-45366141 Msa1156830:intron 65.0%
CGCGGTGGTCGTGGATTTGG+TGG - chr7_4:45366125-45366144 Msa1156830:intron 65.0%
GTGGACGAGGAGGTGACCGT+GGG - chr7_4:45366144-45366163 Msa1156830:intron 65.0%
CGAGGAGGTGACCGTGGGTT+TGG - chr7_4:45366149-45366168 Msa1156830:intron 65.0%
GGAGGTGACCGTGGGTTTGG+TGG - chr7_4:45366152-45366171 Msa1156830:intron 65.0%
!! GACCGTGGGTTTGGTGGACG+TGG - chr7_4:45366158-45366177 Msa1156830:intron 65.0%
!! CGTGGGTTTGGTGGACGTGG+AGG - chr7_4:45366161-45366180 Msa1156830:intron 65.0%
CGTGGAGGTGACCGCGGATT+TGG - chr7_4:45366176-45366195 Msa1156830:intron 65.0%
GGAGGTGACCGCGGATTTGG+TGG - chr7_4:45366179-45366198 Msa1156830:intron 65.0%
!! GGTGACCGCGGATTTGGTGG+TGG - chr7_4:45366182-45366201 Msa1156830:intron 65.0%
!! CGCGGATTTGGTGGTGGTCG+TGG - chr7_4:45366188-45366207 Msa1156830:intron 65.0%
AACCTCCACGACGACCTCCG+CGG + chr7_4:45366352-45366371 None:intergenic 65.0%
ATAACTCAGGTGGGCGCGGC+AGG - chr7_4:45368321-45368340 Msa1156830:intron 65.0%
TAACTCAGGTGGGCGCGGCA+GGG - chr7_4:45368322-45368341 Msa1156830:intron 65.0%
CGTGGTACACGAGGAGGAGG+AGG - chr7_4:45368356-45368375 Msa1156830:intron 65.0%
GGTACACGAGGAGGAGGAGG+AGG - chr7_4:45368359-45368378 Msa1156830:intron 65.0%
ACACGAGGAGGAGGAGGAGG+AGG - chr7_4:45368362-45368381 Msa1156830:intron 65.0%
GGAGGAGGAGGAGGTTTCCG+TGG - chr7_4:45368380-45368399 Msa1156830:intron 65.0%
CCAGCCTGAGCAGGAGGGGT+GGG + chr7_4:45364917-45364936 None:intergenic 70.0%
ACCAGCCTGAGCAGGAGGGG+TGG + chr7_4:45364918-45364937 None:intergenic 70.0%
GAAGGAGGACGCGGTGGTCG+TGG - chr7_4:45366116-45366135 Msa1156830:intron 70.0%
GGTGGACGAGGAGGTGACCG+TGG - chr7_4:45366143-45366162 Msa1156830:intron 70.0%
GGTGGACGTGGAGGTGACCG+CGG - chr7_4:45366170-45366189 Msa1156830:intron 70.0%
! GGTGGTGGTCGTGGAGGTCG+TGG - chr7_4:45366197-45366216 Msa1156830:intron 70.0%
GGACCACGAGGTCCCTACCG+CGG - chr7_4:45366332-45366351 Msa1156830:intron 70.0%
CCACGACGACCTCCGCGGTA+GGG + chr7_4:45366347-45366366 None:intergenic 70.0%
TCCACGACGACCTCCGCGGT+AGG + chr7_4:45366348-45366367 None:intergenic 70.0%
TACCGCGGAGGTCGTCGTGG+AGG - chr7_4:45366347-45366366 Msa1156830:intron 70.0%
! GCCACAGTGGCACTGGGCGA+GGG - chr7_4:45366423-45366442 Msa1156830:intron 70.0%
! ACCCTCGCCCAGTGCCACTG+TGG + chr7_4:45366427-45366446 None:intergenic 70.0%
AACTCAGGTGGGCGCGGCAG+GGG - chr7_4:45368323-45368342 Msa1156830:intron 70.0%
CGTGGTGGCCGTGGTACACG+AGG - chr7_4:45368347-45368366 Msa1156830:intron 70.0%
GGTGGCCGTGGTACACGAGG+AGG - chr7_4:45368350-45368369 Msa1156830:intron 70.0%
GGCCGTGGTACACGAGGAGG+AGG - chr7_4:45368353-45368372 Msa1156830:intron 70.0%
CGAGGAGGAGGAGGAGGAGG+AGG - chr7_4:45368365-45368384 Msa1156830:intron 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr7_4:45368368-45368387 Msa1156830:intron 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr7_4:45368368-45368387 Msa1156830:intron 70.0%
CCCACCCCTCCTGCTCAGGC+TGG - chr7_4:45364914-45364933 Msa1156830:three_prime_UTR 75.0%
CCTCCGCGGTAGGGACCTCG+TGG + chr7_4:45366338-45366357 None:intergenic 75.0%
CCACGAGGTCCCTACCGCGG+AGG - chr7_4:45366335-45366354 Msa1156830:intron 75.0%
CCCTACCGCGGAGGTCGTCG+TGG - chr7_4:45366344-45366363 Msa1156830:intron 75.0%
! CGCCACAGTGGCACTGGGCG+AGG - chr7_4:45366422-45366441 Msa1156830:intron 75.0%
! GGCAGGGGACGTGGTGGCCG+TGG - chr7_4:45368338-45368357 Msa1156830:intron 80.0%
! GGTGGGCGCGGCAGGGGACG+TGG - chr7_4:45368329-45368348 Msa1156830:intron 85.0%
! GGGCGCGGCAGGGGACGTGG+TGG - chr7_4:45368332-45368351 Msa1156830:intron 85.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 45364483 45369053 45364483 ID=Msa1156830;Name=Msa1156830
chr7_4 mRNA 45364483 45369053 45364483 ID=Msa1156830-mRNA-1;Parent=Msa1156830;Name=Msa1156830-mRNA-1;_AED=0.03;_eAED=0.03;_QI=266|1|1|1|1|1|7|578|382
chr7_4 exon 45364483 45365264 45364483 ID=Msa1156830-mRNA-1:exon:11797;Parent=Msa1156830-mRNA-1
chr7_4 exon 45365809 45365865 45365809 ID=Msa1156830-mRNA-1:exon:11796;Parent=Msa1156830-mRNA-1
chr7_4 exon 45365979 45366134 45365979 ID=Msa1156830-mRNA-1:exon:11795;Parent=Msa1156830-mRNA-1
chr7_4 exon 45366686 45366818 45366686 ID=Msa1156830-mRNA-1:exon:11794;Parent=Msa1156830-mRNA-1
chr7_4 exon 45366932 45366997 45366932 ID=Msa1156830-mRNA-1:exon:11793;Parent=Msa1156830-mRNA-1
chr7_4 exon 45367092 45367437 45367092 ID=Msa1156830-mRNA-1:exon:11792;Parent=Msa1156830-mRNA-1
chr7_4 exon 45368601 45369053 45368601 ID=Msa1156830-mRNA-1:exon:11791;Parent=Msa1156830-mRNA-1
chr7_4 five_prime_UTR 45368788 45369053 45368788 ID=Msa1156830-mRNA-1:five_prime_utr;Parent=Msa1156830-mRNA-1
chr7_4 CDS 45368601 45368787 45368601 ID=Msa1156830-mRNA-1:cds;Parent=Msa1156830-mRNA-1
chr7_4 CDS 45367092 45367437 45367092 ID=Msa1156830-mRNA-1:cds;Parent=Msa1156830-mRNA-1
chr7_4 CDS 45366932 45366997 45366932 ID=Msa1156830-mRNA-1:cds;Parent=Msa1156830-mRNA-1
chr7_4 CDS 45366686 45366818 45366686 ID=Msa1156830-mRNA-1:cds;Parent=Msa1156830-mRNA-1
chr7_4 CDS 45365979 45366134 45365979 ID=Msa1156830-mRNA-1:cds;Parent=Msa1156830-mRNA-1
chr7_4 CDS 45365809 45365865 45365809 ID=Msa1156830-mRNA-1:cds;Parent=Msa1156830-mRNA-1
chr7_4 CDS 45365061 45365264 45365061 ID=Msa1156830-mRNA-1:cds;Parent=Msa1156830-mRNA-1
chr7_4 three_prime_UTR 45364483 45365060 45364483 ID=Msa1156830-mRNA-1:three_prime_utr;Parent=Msa1156830-mRNA-1
Gene Sequence

>Msa1156830

ATGGCCACTACCAATCCATTTGATTTGCTTGGTGATGACGCTGAGGACCCTTCTCAGCTCATCGTTGCTGAACAGCTCAAAGCTGCTGCTGCTCCTCCTGCTGCTAAGAAAGGTGCTGTCAAGGAACAGGGCAAGCCTAACAAGCCTGCGTTGTTGCCTTCTAAGCCCACCCCTCCTGCTCAGGCTGTGAGGGAGTCCAGAAATGAAGGAGGACGCGGTGGTCGTGGATTTGGTGGACGAGGAGGTGACCGTGGGTTTGGTGGACGTGGAGGTGACCGCGGATTTGGTGGTGGTCGTGGAGGTCGTGGTTTCGGCCGTGACTACTCAAATGATGACAATTCGTTCCCTGCCTCTGGAGCCCCTGAAAACCAGGGTCCTGTTGAAGAAGGAGATAGGTCCTCAGAAAGACGTAGCTATGGTGGACCACGAGGTCCCTACCGCGGAGGTCGTCGTGGAGGTTTCAACAATGGTGATGCTGGTGAAGAGGGAAGACCCCGAAGAACATTTGAACGCCACAGTGGCACTGGGCGAGGAAACGATTTCAAGCGTGAAGGTGCTGGAAGGGGTAACTGGGGAACAGAAACTGATGAAATTGCTCAGGTGACTGAAGAAGTCATGAATGAAGATGAAAAGAATTTGGGTGATGAGAAGCCTGCAGCTGAAACTGATGTTGCCGAAGGGAACAAGGATAGCCCTGCCAATGAAGCTGAAGAAAAGGAGCCTGAAGACAAGGAAATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGAAAGGCTTTGCAAGCTCTAAAGACTGAAGAGAGAAAGGTTGACACTAAAGCATTTGAAACCATGCAGGCCTTATCGTGCAAGAAAGACAATACTGAAATCTTTGCTAAATTGGGAGCTGATAAGGATAAGCGCAAAGAGGCTTATGACAAGGAAGAGAAAGCCAAGAAGTCTGTCAGTATCAATGAGTTTCTGAAGCCAGCTGAAGGAGAATCCCACTATAACTCAGGTGGGCGCGGCAGGGGACGTGGTGGCCGTGGTACACGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTTCCGTGGAAATTCGTACAGCAATGTACCTGCTCCATCCATTGAAGATCCCGGGCATTTCCCTACCTTGGGTGCCAAGTGA
Protein sequence

>Msa1156830

MATTNPFDLLGDDAEDPSQLIVAEQLKAAAAPPAAKKGAVKEQGKPNKPALLPSKPTPPAQAVRESRNEGGRGGRGFGGRGGDRGFGGRGGDRGFGGGRGGRGFGRDYSNDDNSFPASGAPENQGPVEEGDRSSERRSYGGPRGPYRGGRRGGFNNGDAGEEGRPRRTFERHSGTGRGNDFKREGAGRGNWGTETDEIAQVTEEVMNEDEKNLGDEKPAAETDVAEGNKDSPANEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEERKVDTKAFETMQALSCKKDNTEIFAKLGADKDKRKEAYDKEEKAKKSVSINEFLKPAEGESHYNSGGRGRGRGGRGTRGGGGGGGGGFRGNSYSNVPAPSIEDPGHFPTLGAK*