Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604640 | XP_013456310.1 | 90.494 | 263 | 2 | 1 | 1 | 263 | 1 | 240 | 2.81e-169 | 477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604640 | sp|Q96288|BBX24_ARATH | 58.364 | 269 | 85 | 5 | 1 | 263 | 1 | 248 | 5.05e-100 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0604640 | TF | DBB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005630 | Msa0604640 | 0.810914 | 9.094842e-51 | -8.615850e-47 |
| Msa0016830 | Msa0604640 | 0.844825 | 5.947377e-59 | -8.615850e-47 |
| Msa0021710 | Msa0604640 | 0.807774 | 4.288651e-50 | -8.615850e-47 |
| Msa0039200 | Msa0604640 | 0.802500 | 5.447188e-49 | -8.615850e-47 |
| Msa0040090 | Msa0604640 | 0.812756 | 3.612534e-51 | -8.615850e-47 |
| Msa0046670 | Msa0604640 | 0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0057740 | Msa0604640 | 0.834156 | 3.527497e-56 | -8.615850e-47 |
| Msa0064180 | Msa0604640 | 0.802856 | 4.598935e-49 | -8.615850e-47 |
| Msa0065190 | Msa0604640 | 0.837935 | 3.874796e-57 | -8.615850e-47 |
| Msa0066990 | Msa0604640 | 0.829300 | 5.560514e-55 | -8.615850e-47 |
| Msa0080620 | Msa0604640 | 0.830786 | 2.414066e-55 | -8.615850e-47 |
| Msa0083570 | Msa0604640 | 0.806264 | 8.950475e-50 | -8.615850e-47 |
| Msa0086820 | Msa0604640 | 0.800156 | 1.644562e-48 | -8.615850e-47 |
| Msa0087580 | Msa0604640 | 0.811206 | 7.863417e-51 | -8.615850e-47 |
| Msa0087780 | Msa0604640 | 0.833704 | 4.576808e-56 | -8.615850e-47 |
| Msa0087790 | Msa0604640 | 0.801786 | 7.637843e-49 | -8.615850e-47 |
| Msa0092750 | Msa0604640 | 0.801445 | 8.972772e-49 | -8.615850e-47 |
| Msa0096020 | Msa0604640 | 0.832026 | 1.195088e-55 | -8.615850e-47 |
| Msa0096570 | Msa0604640 | 0.825085 | 5.679892e-54 | -8.615850e-47 |
| Msa0103060 | Msa0604640 | 0.825676 | 4.117399e-54 | -8.615850e-47 |
| Msa0110500 | Msa0604640 | 0.809845 | 1.547418e-50 | -8.615850e-47 |
| Msa0112800 | Msa0604640 | 0.802597 | 5.201806e-49 | -8.615850e-47 |
| Msa0117300 | Msa0604640 | 0.830545 | 2.764173e-55 | -8.615850e-47 |
| Msa0604640 | Msa0606680 | 0.844884 | 5.733549e-59 | -8.615850e-47 |
| Msa0604640 | Msa0608940 | 0.840999 | 6.199940e-58 | -8.615850e-47 |
| Msa0604640 | Msa0614390 | 0.812008 | 5.262967e-51 | -8.615850e-47 |
| Msa0604640 | Msa0615850 | 0.820883 | 5.421610e-53 | -8.615850e-47 |
| Msa0604640 | Msa0621780 | 0.833756 | 4.440930e-56 | -8.615850e-47 |
| Msa0604640 | Msa0624240 | 0.804262 | 2.350473e-49 | -8.615850e-47 |
| Msa0604640 | Msa0635350 | 0.819332 | 1.227983e-52 | -8.615850e-47 |
| Msa0604640 | Msa0638040 | 0.815127 | 1.083908e-51 | -8.615850e-47 |
| Msa0604640 | Msa0649530 | 0.813131 | 2.990026e-51 | -8.615850e-47 |
| Msa0604640 | Msa0659130 | 0.813522 | 2.453280e-51 | -8.615850e-47 |
| Msa0604640 | Msa0672350 | 0.823313 | 1.481446e-53 | -8.615850e-47 |
| Msa0604640 | Msa0677110 | 0.830528 | 2.791980e-55 | -8.615850e-47 |
| Msa0604640 | Msa0685390 | 0.814356 | 1.606253e-51 | -8.615850e-47 |
| Msa0604640 | Msa0687320 | 0.806379 | 8.466306e-50 | -8.615850e-47 |
| Msa0604640 | Msa0691740 | 0.806399 | 8.383894e-50 | -8.615850e-47 |
| Msa0604640 | Msa0698900 | 0.822094 | 2.846586e-53 | -8.615850e-47 |
| Msa0604640 | Msa0704780 | 0.827515 | 1.499425e-54 | -8.615850e-47 |
| Msa0604640 | Msa0705050 | 0.861141 | 1.263564e-63 | -8.615850e-47 |
| Msa0604640 | Msa0705130 | 0.821268 | 4.419325e-53 | -8.615850e-47 |
| Msa0604640 | Msa0705610 | 0.811661 | 6.261288e-51 | -8.615850e-47 |
| Msa0604640 | Msa0712670 | 0.803138 | 4.022873e-49 | -8.615850e-47 |
| Msa0604640 | Msa0713530 | 0.819087 | 1.396167e-52 | -8.615850e-47 |
| Msa0604640 | Msa0714060 | 0.819446 | 1.156825e-52 | -8.615850e-47 |
| Msa0604640 | Msa0714200 | 0.823485 | 1.350140e-53 | -8.615850e-47 |
| Msa0604640 | Msa0729120 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
| Msa0604640 | Msa0729590 | 0.852025 | 6.049863e-61 | -8.615850e-47 |
| Msa0604640 | Msa0731740 | 0.816343 | 5.806014e-52 | -8.615850e-47 |
| Msa0604640 | Msa0734760 | 0.818711 | 1.700077e-52 | -8.615850e-47 |
| Msa0604640 | Msa0736930 | 0.816346 | 5.797362e-52 | -8.615850e-47 |
| Msa0604640 | Msa0739330 | 0.804740 | 1.868075e-49 | -8.615850e-47 |
| Msa0604640 | Msa0739610 | 0.800046 | 1.732144e-48 | -8.615850e-47 |
| Msa0604640 | Msa0741600 | 0.811489 | 6.825097e-51 | -8.615850e-47 |
| Msa0604640 | Msa0741710 | 0.812186 | 4.811768e-51 | -8.615850e-47 |
| Msa0604640 | Msa0747900 | 0.826403 | 2.765742e-54 | -8.615850e-47 |
| Msa0604640 | Msa0748050 | 0.823712 | 1.195209e-53 | -8.615850e-47 |
| Msa0604640 | Msa0749160 | 0.818556 | 1.843012e-52 | -8.615850e-47 |
| Msa0604640 | Msa0752830 | 0.860112 | 2.591061e-63 | -8.615850e-47 |
| Msa0604640 | Msa0754350 | 0.823735 | 1.180065e-53 | -8.615850e-47 |
| Msa0604640 | Msa0754790 | 0.802861 | 4.587899e-49 | -8.615850e-47 |
| Msa0604640 | Msa0754840 | 0.820564 | 6.417034e-53 | -8.615850e-47 |
| Msa0604640 | Msa0755590 | 0.830217 | 3.326117e-55 | -8.615850e-47 |
| Msa0604640 | Msa0756440 | 0.834743 | 2.512412e-56 | -8.615850e-47 |
| Msa0604640 | Msa0756570 | -0.807774 | 4.288471e-50 | -8.615850e-47 |
| Msa0604640 | Msa0762390 | 0.802006 | 6.885957e-49 | -8.615850e-47 |
| Msa0604640 | Msa0766880 | 0.823487 | 1.349225e-53 | -8.615850e-47 |
| Msa0604640 | Msa0770020 | 0.807210 | 5.649830e-50 | -8.615850e-47 |
| Msa0604640 | Msa0771960 | 0.837451 | 5.159028e-57 | -8.615850e-47 |
| Msa0604640 | Msa0772040 | 0.807938 | 3.958279e-50 | -8.615850e-47 |
| Msa0604640 | Msa0773290 | 0.819414 | 1.175962e-52 | -8.615850e-47 |
| Msa0604640 | Msa0776590 | 0.814228 | 1.714736e-51 | -8.615850e-47 |
| Msa0604640 | Msa0781900 | 0.813449 | 2.545055e-51 | -8.615850e-47 |
| Msa0604640 | Msa0782030 | 0.815255 | 1.015080e-51 | -8.615850e-47 |
| Msa0604640 | Msa0793060 | 0.803423 | 3.510684e-49 | -8.615850e-47 |
| Msa0604640 | Msa0795710 | 0.833842 | 4.227248e-56 | -8.615850e-47 |
| Msa0604640 | Msa0796610 | 0.833257 | 5.917070e-56 | -8.615850e-47 |
| Msa0604640 | Msa0797240 | 0.832812 | 7.633229e-56 | -8.615850e-47 |
| Msa0604640 | Msa0797810 | 0.804117 | 2.519731e-49 | -8.615850e-47 |
| Msa0604640 | Msa0802530 | 0.823426 | 1.393749e-53 | -8.615850e-47 |
| Msa0604640 | Msa0803930 | 0.801643 | 8.173176e-49 | -8.615850e-47 |
| Msa0604640 | Msa0813630 | 0.837741 | 4.347207e-57 | -8.615850e-47 |
| Msa0604640 | Msa0815950 | 0.810692 | 1.015980e-50 | -8.615850e-47 |
| Msa0604640 | Msa0822370 | 0.802889 | 4.528572e-49 | -8.615850e-47 |
| Msa0604640 | Msa0833450 | 0.822872 | 1.877499e-53 | -8.615850e-47 |
| Msa0604640 | Msa0833910 | 0.833138 | 6.333532e-56 | -8.615850e-47 |
| Msa0604640 | Msa0834160 | 0.843487 | 1.359297e-58 | -8.615850e-47 |
| Msa0604640 | Msa0835010 | 0.827140 | 1.844179e-54 | -8.615850e-47 |
| Msa0604640 | Msa0835550 | 0.830768 | 2.438207e-55 | -8.615850e-47 |
| Msa0604640 | Msa0840890 | 0.852989 | 3.213998e-61 | -8.615850e-47 |
| Msa0604640 | Msa0848780 | 0.844361 | 7.929147e-59 | -8.615850e-47 |
| Msa0604640 | Msa0849290 | 0.811879 | 5.613289e-51 | -8.615850e-47 |
| Msa0604640 | Msa0850520 | 0.842689 | 2.218395e-58 | -8.615850e-47 |
| Msa0604640 | Msa0861480 | 0.827832 | 1.258037e-54 | -8.615850e-47 |
| Msa0604640 | Msa0861560 | 0.822396 | 2.422073e-53 | -8.615850e-47 |
| Msa0604640 | Msa0866510 | 0.810512 | 1.110909e-50 | -8.615850e-47 |
| Msa0604640 | Msa0876030 | 0.800817 | 1.206126e-48 | -8.615850e-47 |
| Msa0604640 | Msa0876150 | 0.836016 | 1.197973e-56 | -8.615850e-47 |
| Msa0604640 | Msa0883690 | 0.806467 | 8.108943e-50 | -8.615850e-47 |
| Msa0604640 | Msa0883880 | 0.800824 | 1.202561e-48 | -8.615850e-47 |
| Msa0604640 | Msa0894580 | 0.806127 | 9.566527e-50 | -8.615850e-47 |
| Msa0604640 | Msa0899080 | 0.801828 | 7.487781e-49 | -8.615850e-47 |
| Msa0604640 | Msa0902340 | -0.801839 | 7.448709e-49 | -8.615850e-47 |
| Msa0604640 | Msa0913120 | 0.861890 | 7.465728e-64 | -8.615850e-47 |
| Msa0604640 | Msa0927190 | 0.814644 | 1.387457e-51 | -8.615850e-47 |
| Msa0604640 | Msa0927890 | 0.865662 | 5.020436e-65 | -8.615850e-47 |
| Msa0604640 | Msa0930950 | 0.856081 | 4.094707e-62 | -8.615850e-47 |
| Msa0604640 | Msa0967250 | 0.805396 | 1.362171e-49 | -8.615850e-47 |
| Msa0604640 | Msa0967260 | 0.854395 | 1.266906e-61 | -8.615850e-47 |
| Msa0604640 | Msa0968240 | 0.815414 | 9.356700e-52 | -8.615850e-47 |
| Msa0604640 | Msa0984840 | 0.805429 | 1.340510e-49 | -8.615850e-47 |
| Msa0604640 | Msa0986620 | 0.806072 | 9.824349e-50 | -8.615850e-47 |
| Msa0604640 | Msa0995660 | 0.830204 | 3.350458e-55 | -8.615850e-47 |
| Msa0604640 | Msa0998940 | 0.828030 | 1.127750e-54 | -8.615850e-47 |
| Msa0604640 | Msa0999480 | 0.813183 | 2.911515e-51 | -8.615850e-47 |
| Msa0604640 | Msa1014120 | 0.815474 | 9.075651e-52 | -8.615850e-47 |
| Msa0604640 | Msa1031220 | 0.810674 | 1.025178e-50 | -8.615850e-47 |
| Msa0604640 | Msa1033230 | 0.820316 | 7.316259e-53 | -8.615850e-47 |
| Msa0604640 | Msa1036020 | -0.815054 | 1.125298e-51 | -8.615850e-47 |
| Msa0604640 | Msa1044330 | 0.834247 | 3.346061e-56 | -8.615850e-47 |
| Msa0604640 | Msa1044790 | 0.814569 | 1.441202e-51 | -8.615850e-47 |
| Msa0604640 | Msa1057340 | 0.819542 | 1.099381e-52 | -8.615850e-47 |
| Msa0604640 | Msa1067910 | 0.839315 | 1.705737e-57 | -8.615850e-47 |
| Msa0604640 | Msa1069440 | 0.819079 | 1.401983e-52 | -8.615850e-47 |
| Msa0604640 | Msa1071310 | 0.827738 | 1.325555e-54 | -8.615850e-47 |
| Msa0604640 | Msa1071460 | 0.822257 | 2.610010e-53 | -8.615850e-47 |
| Msa0604640 | Msa1072770 | 0.812726 | 3.666641e-51 | -8.615850e-47 |
| Msa0604640 | Msa1073550 | 0.807203 | 5.670166e-50 | -8.615850e-47 |
| Msa0604640 | Msa1078300 | -0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0604640 | Msa1079610 | 0.811687 | 6.181791e-51 | -8.615850e-47 |
| Msa0604640 | Msa1085370 | 0.808469 | 3.049740e-50 | -8.615850e-47 |
| Msa0604640 | Msa1098470 | 0.808310 | 3.298050e-50 | -8.615850e-47 |
| Msa0604640 | Msa1101300 | 0.808310 | 3.298477e-50 | -8.615850e-47 |
| Msa0604640 | Msa1101610 | 0.809262 | 2.064484e-50 | -8.615850e-47 |
| Msa0604640 | Msa1102180 | 0.807399 | 5.151642e-50 | -8.615850e-47 |
| Msa0604640 | Msa1106320 | 0.801218 | 9.988822e-49 | -8.615850e-47 |
| Msa0604640 | Msa1109500 | 0.800566 | 1.357394e-48 | -8.615850e-47 |
| Msa0604640 | Msa1110030 | 0.834590 | 2.744735e-56 | -8.615850e-47 |
| Msa0604640 | Msa1124440 | 0.813640 | 2.311201e-51 | -8.615850e-47 |
| Msa0604640 | Msa1128850 | 0.816688 | 4.860522e-52 | -8.615850e-47 |
| Msa0604640 | Msa1130860 | 0.800987 | 1.113606e-48 | -8.615850e-47 |
| Msa0604640 | Msa1134770 | -0.806048 | 9.936618e-50 | -8.615850e-47 |
| Msa0604640 | Msa1138600 | 0.808061 | 3.726102e-50 | -8.615850e-47 |
| Msa0604640 | Msa1144420 | 0.858985 | 5.656457e-63 | -8.615850e-47 |
| Msa0604640 | Msa1145070 | 0.841444 | 4.733209e-58 | -8.615850e-47 |
| Msa0604640 | Msa1150130 | 0.813425 | 2.576067e-51 | -8.615850e-47 |
| Msa0604640 | Msa1152500 | 0.825130 | 5.544805e-54 | -8.615850e-47 |
| Msa0604640 | Msa1157310 | 0.809413 | 1.915992e-50 | -8.615850e-47 |
| Msa0604640 | Msa1168130 | 0.809934 | 1.480322e-50 | -8.615850e-47 |
| Msa0604640 | Msa1173410 | 0.836214 | 1.066957e-56 | -8.615850e-47 |
| Msa0604640 | Msa1182960 | 0.843411 | 1.424883e-58 | -8.615850e-47 |
| Msa0604640 | Msa1186010 | 0.807598 | 4.674935e-50 | -8.615850e-47 |
| Msa0604640 | Msa1187810 | 0.821782 | 3.362962e-53 | -8.615850e-47 |
| Msa0604640 | Msa1190090 | -0.809715 | 1.649950e-50 | -8.615850e-47 |
| Msa0604640 | Msa1190320 | 0.801601 | 8.336162e-49 | -8.615850e-47 |
| Msa0604640 | Msa1195860 | 0.803415 | 3.523929e-49 | -8.615850e-47 |
| Msa0604640 | Msa1198420 | 0.819338 | 1.224266e-52 | -8.615850e-47 |
| Msa0604640 | Msa1199690 | 0.817271 | 3.595273e-52 | -8.615850e-47 |
| Msa0604640 | Msa1203840 | 0.839267 | 1.755213e-57 | -8.615850e-47 |
| Msa0604640 | Msa1203860 | 0.866462 | 2.801003e-65 | -8.615850e-47 |
| Msa0604640 | Msa1211260 | 0.802547 | 5.326466e-49 | -8.615850e-47 |
| Msa0604640 | Msa1216700 | 0.842970 | 1.868073e-58 | -8.615850e-47 |
| Msa0604640 | Msa1216900 | 0.833554 | 4.988995e-56 | -8.615850e-47 |
| Msa0604640 | Msa1221170 | -0.802737 | 4.868102e-49 | -8.615850e-47 |
| Msa0604640 | Msa1223510 | 0.845278 | 4.487051e-59 | -8.615850e-47 |
| Msa0604640 | Msa1228330 | 0.802863 | 4.584585e-49 | -8.615850e-47 |
| Msa0604640 | Msa1230190 | 0.815847 | 7.494154e-52 | -8.615850e-47 |
| Msa0604640 | Msa1235030 | 0.836692 | 8.062135e-57 | -8.615850e-47 |
| Msa0604640 | Msa1242990 | 0.877778 | 4.781062e-69 | -8.615850e-47 |
| Msa0604640 | Msa1244710 | 0.831691 | 1.445919e-55 | -8.615850e-47 |
| Msa0604640 | Msa1253270 | -0.800725 | 1.259577e-48 | -8.615850e-47 |
| Msa0604640 | Msa1254200 | 0.808422 | 3.120828e-50 | -8.615850e-47 |
| Msa0604640 | Msa1258020 | -0.802687 | 4.984133e-49 | -8.615850e-47 |
| Msa0604640 | Msa1264230 | 0.806877 | 6.644487e-50 | -8.615850e-47 |
| Msa0604640 | Msa1272770 | 0.820293 | 7.404334e-53 | -8.615850e-47 |
| Msa0604640 | Msa1284390 | 0.867216 | 1.611161e-65 | -8.615850e-47 |
| Msa0604640 | Msa1286950 | 0.808005 | 3.830922e-50 | -8.615850e-47 |
| Msa0604640 | Msa1287640 | 0.805840 | 1.098954e-49 | -8.615850e-47 |
| Msa0604640 | Msa1288970 | 0.803037 | 4.219577e-49 | -8.615850e-47 |
| Msa0604640 | Msa1289340 | 0.808213 | 3.458112e-50 | -8.615850e-47 |
| Msa0604640 | Msa1296270 | 0.832538 | 8.930732e-56 | -8.615850e-47 |
| Msa0604640 | Msa1302780 | 0.847774 | 9.344609e-60 | -8.615850e-47 |
| Msa0604640 | Msa1302920 | 0.801666 | 8.085678e-49 | -8.615850e-47 |
| Msa0604640 | Msa1309910 | 0.808037 | 3.770337e-50 | -8.615850e-47 |
| Msa0604640 | Msa1319230 | 0.803511 | 3.366022e-49 | -8.615850e-47 |
| Msa0604640 | Msa1323920 | 0.834950 | 2.227760e-56 | -8.615850e-47 |
| Msa0604640 | Msa1326900 | 0.804614 | 1.985072e-49 | -8.615850e-47 |
| Msa0604640 | Msa1329660 | 0.832840 | 7.514078e-56 | -8.615850e-47 |
| Msa0604640 | Msa1330910 | 0.832719 | 8.051818e-56 | -8.615850e-47 |
| Msa0604640 | Msa1335130 | 0.821944 | 3.083913e-53 | -8.615850e-47 |
| Msa0604640 | Msa1335500 | -0.811524 | 6.707715e-51 | -8.615850e-47 |
| Msa0604640 | Msa1336350 | 0.822747 | 2.008068e-53 | -8.615850e-47 |
| Msa0604640 | Msa1342400 | 0.851548 | 8.263256e-61 | -8.615850e-47 |
| Msa0604640 | Msa1344610 | 0.809967 | 1.456397e-50 | -8.615850e-47 |
| Msa0604640 | Msa1348330 | -0.800288 | 1.546279e-48 | -8.615850e-47 |
| Msa0604640 | Msa1349640 | 0.812988 | 3.212485e-51 | -8.615850e-47 |
| Msa0604640 | Msa1349850 | 0.864322 | 1.321458e-64 | -8.615850e-47 |
| Msa0604640 | Msa1351560 | 0.803296 | 3.730622e-49 | -8.615850e-47 |
| Msa0604640 | Msa1364520 | 0.827166 | 1.817770e-54 | -8.615850e-47 |
| Msa0604640 | Msa1368660 | 0.839976 | 1.147972e-57 | -8.615850e-47 |
| Msa0604640 | Msa1381720 | 0.821231 | 4.505865e-53 | -8.615850e-47 |
| Msa0604640 | Msa1384980 | 0.832739 | 7.959603e-56 | -8.615850e-47 |
| Msa0604640 | Msa1385940 | 0.837772 | 4.267631e-57 | -8.615850e-47 |
| Msa0604640 | Msa1388070 | 0.824136 | 9.503589e-54 | -8.615850e-47 |
| Msa0604640 | Msa1388270 | 0.821166 | 4.665254e-53 | -8.615850e-47 |
| Msa0604640 | Msa1388520 | 0.801792 | 7.618865e-49 | -8.615850e-47 |
| Msa0604640 | Msa1390480 | 0.806981 | 6.317763e-50 | -8.615850e-47 |
| Msa0604640 | Msa1393600 | 0.842964 | 1.874026e-58 | -8.615850e-47 |
| Msa0604640 | Msa1395580 | 0.846363 | 2.277228e-59 | -8.615850e-47 |
| Msa0604640 | Msa1403950 | 0.838022 | 3.680354e-57 | -8.615850e-47 |
| Msa0604640 | Msa1409060 | -0.810175 | 1.313746e-50 | -8.615850e-47 |
| Msa0604640 | Msa1413220 | 0.835085 | 2.059688e-56 | -8.615850e-47 |
| Msa0604640 | Msa1413900 | 0.804502 | 2.095078e-49 | -8.615850e-47 |
| Msa0604640 | Msa1414560 | 0.811406 | 7.114876e-51 | -8.615850e-47 |
| Msa0604640 | Msa1415270 | 0.807971 | 3.895422e-50 | -8.615850e-47 |
| Msa0604640 | Msa1422150 | 0.809058 | 2.282129e-50 | -8.615850e-47 |
| Msa0604640 | Msa1425630 | 0.801018 | 1.097228e-48 | -8.615850e-47 |
| Msa0604640 | Msa1427180 | 0.840567 | 8.046964e-58 | -8.615850e-47 |
| Msa0604640 | Msa1431180 | 0.807632 | 4.597854e-50 | -8.615850e-47 |
| Msa0604640 | Msa1431870 | 0.818259 | 2.152154e-52 | -8.615850e-47 |
| Msa0604640 | Msa1432250 | 0.814738 | 1.322417e-51 | -8.615850e-47 |
| Msa0604640 | Msa1446220 | 0.831792 | 1.365506e-55 | -8.615850e-47 |
| Msa0604640 | Msa1450850 | 0.808401 | 3.153359e-50 | -8.615850e-47 |
| Msa0604640 | Msa1451690 | 0.837449 | 5.162863e-57 | -8.615850e-47 |
| Msa0604640 | Msa1452200 | 0.961616 | 6.575605e-120 | -8.615850e-47 |
| Msa0604640 | Msa1459630 | 0.825625 | 4.232143e-54 | -8.615850e-47 |
| Msa0604640 | Msa1463500 | 0.806321 | 8.705624e-50 | -8.615850e-47 |
| Msa0133450 | Msa0604640 | 0.816604 | 5.076158e-52 | -8.615850e-47 |
| Msa0133670 | Msa0604640 | 0.801919 | 7.172373e-49 | -8.615850e-47 |
| Msa0133880 | Msa0604640 | 0.801480 | 8.826649e-49 | -8.615850e-47 |
| Msa0134300 | Msa0604640 | 0.810954 | 8.916800e-51 | -8.615850e-47 |
| Msa0134380 | Msa0604640 | 0.821012 | 5.062803e-53 | -8.615850e-47 |
| Msa0134390 | Msa0604640 | 0.834222 | 3.395543e-56 | -8.615850e-47 |
| Msa0134400 | Msa0604640 | 0.804972 | 1.671202e-49 | -8.615850e-47 |
| Msa0173280 | Msa0604640 | 0.820189 | 7.824200e-53 | -8.615850e-47 |
| Msa0175480 | Msa0604640 | 0.813121 | 3.005284e-51 | -8.615850e-47 |
| Msa0180540 | Msa0604640 | 0.824263 | 8.875805e-54 | -8.615850e-47 |
| Msa0180590 | Msa0604640 | 0.807783 | 4.270314e-50 | -8.615850e-47 |
| Msa0180600 | Msa0604640 | 0.820542 | 6.491012e-53 | -8.615850e-47 |
| Msa0183920 | Msa0604640 | -0.802826 | 4.666355e-49 | -8.615850e-47 |
| Msa0184030 | Msa0604640 | 0.815152 | 1.070177e-51 | -8.615850e-47 |
| Msa0184120 | Msa0604640 | 0.808358 | 3.221570e-50 | -8.615850e-47 |
| Msa0184330 | Msa0604640 | 0.800924 | 1.147091e-48 | -8.615850e-47 |
| Msa0184850 | Msa0604640 | 0.806396 | 8.395517e-50 | -8.615850e-47 |
| Msa0185950 | Msa0604640 | 0.805658 | 1.200162e-49 | -8.615850e-47 |
| Msa0186510 | Msa0604640 | 0.827885 | 1.221724e-54 | -8.615850e-47 |
| Msa0188500 | Msa0604640 | 0.845999 | 2.860922e-59 | -8.615850e-47 |
| Msa0190470 | Msa0604640 | 0.802124 | 6.511643e-49 | -8.615850e-47 |
| Msa0203180 | Msa0604640 | 0.805262 | 1.453000e-49 | -8.615850e-47 |
| Msa0213020 | Msa0604640 | 0.803406 | 3.539062e-49 | -8.615850e-47 |
| Msa0216010 | Msa0604640 | 0.829948 | 3.867230e-55 | -8.615850e-47 |
| Msa0216560 | Msa0604640 | 0.802947 | 4.405155e-49 | -8.615850e-47 |
| Msa0222510 | Msa0604640 | 0.815383 | 9.511098e-52 | -8.615850e-47 |
| Msa0222720 | Msa0604640 | 0.827072 | 1.914423e-54 | -8.615850e-47 |
| Msa0223190 | Msa0604640 | 0.840530 | 8.226047e-58 | -8.615850e-47 |
| Msa0229750 | Msa0604640 | 0.817555 | 3.103282e-52 | -8.615850e-47 |
| Msa0230980 | Msa0604640 | 0.856674 | 2.742736e-62 | -8.615850e-47 |
| Msa0364910 | Msa0604640 | 0.804883 | 1.744469e-49 | -8.615850e-47 |
| Msa0369750 | Msa0604640 | 0.803360 | 3.617313e-49 | -8.615850e-47 |
| Msa0372550 | Msa0604640 | 0.822162 | 2.745701e-53 | -8.615850e-47 |
| Msa0372990 | Msa0604640 | 0.850915 | 1.246752e-60 | -8.615850e-47 |
| Msa0377460 | Msa0604640 | 0.823036 | 1.719057e-53 | -8.615850e-47 |
| Msa0377690 | Msa0604640 | 0.806730 | 7.136913e-50 | -8.615850e-47 |
| Msa0378670 | Msa0604640 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0378700 | Msa0604640 | 0.800501 | 1.399391e-48 | -8.615850e-47 |
| Msa0379900 | Msa0604640 | 0.813494 | 2.488222e-51 | -8.615850e-47 |
| Msa0379950 | Msa0604640 | 0.816322 | 5.870699e-52 | -8.615850e-47 |
| Msa0381370 | Msa0604640 | 0.809345 | 1.980758e-50 | -8.615850e-47 |
| Msa0385770 | Msa0604640 | 0.811952 | 5.412581e-51 | -8.615850e-47 |
| Msa0393140 | Msa0604640 | 0.808696 | 2.727539e-50 | -8.615850e-47 |
| Msa0403720 | Msa0604640 | 0.853089 | 3.007952e-61 | -8.615850e-47 |
| Msa0404180 | Msa0604640 | 0.802423 | 5.650644e-49 | -8.615850e-47 |
| Msa0404880 | Msa0604640 | 0.847424 | 1.166598e-59 | -8.615850e-47 |
| Msa0408160 | Msa0604640 | 0.808385 | 3.178146e-50 | -8.615850e-47 |
| Msa0419040 | Msa0604640 | 0.825494 | 4.546036e-54 | -8.615850e-47 |
| Msa0421390 | Msa0604640 | 0.836766 | 7.721542e-57 | -8.615850e-47 |
| Msa0422520 | Msa0604640 | 0.807722 | 4.399509e-50 | -8.615850e-47 |
| Msa0423110 | Msa0604640 | 0.803423 | 3.511523e-49 | -8.615850e-47 |
| Msa0426860 | Msa0604640 | 0.818167 | 2.257097e-52 | -8.615850e-47 |
| Msa0426890 | Msa0604640 | 0.815889 | 7.334901e-52 | -8.615850e-47 |
| Msa0427050 | Msa0604640 | 0.814778 | 1.295504e-51 | -8.615850e-47 |
| Msa0430040 | Msa0604640 | 0.810367 | 1.193849e-50 | -8.615850e-47 |
| Msa0431940 | Msa0604640 | 0.847157 | 1.380818e-59 | -8.615850e-47 |
| Msa0448400 | Msa0604640 | 0.827609 | 1.423158e-54 | -8.615850e-47 |
| Msa0452120 | Msa0604640 | 0.803770 | 2.974402e-49 | -8.615850e-47 |
| Msa0452180 | Msa0604640 | 0.815515 | 8.887391e-52 | -8.615850e-47 |
| Msa0453310 | Msa0604640 | 0.839934 | 1.176993e-57 | -8.615850e-47 |
| Msa0456480 | Msa0604640 | 0.874091 | 8.856450e-68 | -8.615850e-47 |
| Msa0463580 | Msa0604640 | 0.846106 | 2.675382e-59 | -8.615850e-47 |
| Msa0466830 | Msa0604640 | 0.801627 | 8.236621e-49 | -8.615850e-47 |
| Msa0473320 | Msa0604640 | 0.838743 | 2.398873e-57 | -8.615850e-47 |
| Msa0473450 | Msa0604640 | 0.821189 | 4.609460e-53 | -8.615850e-47 |
| Msa0481050 | Msa0604640 | 0.845257 | 4.546577e-59 | -8.615850e-47 |
| Msa0246300 | Msa0604640 | 0.819004 | 1.458141e-52 | -8.615850e-47 |
| Msa0256170 | Msa0604640 | 0.827782 | 1.293612e-54 | -8.615850e-47 |
| Msa0264020 | Msa0604640 | 0.830481 | 2.867064e-55 | -8.615850e-47 |
| Msa0264420 | Msa0604640 | 0.834365 | 3.126325e-56 | -8.615850e-47 |
| Msa0270460 | Msa0604640 | 0.872559 | 2.897078e-67 | -8.615850e-47 |
| Msa0301460 | Msa0604640 | 0.802812 | 4.697927e-49 | -8.615850e-47 |
| Msa0301800 | Msa0604640 | 0.804719 | 1.887703e-49 | -8.615850e-47 |
| Msa0302020 | Msa0604640 | 0.816507 | 5.337725e-52 | -8.615850e-47 |
| Msa0302310 | Msa0604640 | 0.838225 | 3.262702e-57 | -8.615850e-47 |
| Msa0309060 | Msa0604640 | 0.842598 | 2.344875e-58 | -8.615850e-47 |
| Msa0311330 | Msa0604640 | 0.813126 | 2.997329e-51 | -8.615850e-47 |
| Msa0338900 | Msa0604640 | 0.827522 | 1.493726e-54 | -8.615850e-47 |
| Msa0339340 | Msa0604640 | 0.827707 | 1.348068e-54 | -8.615850e-47 |
| Msa0339670 | Msa0604640 | 0.836958 | 6.895050e-57 | -8.615850e-47 |
| Msa0349450 | Msa0604640 | 0.823972 | 1.038562e-53 | -8.615850e-47 |
| Msa0356250 | Msa0604640 | -0.808635 | 2.810887e-50 | -8.615850e-47 |
| Msa0364010 | Msa0604640 | 0.843710 | 1.185227e-58 | -8.615850e-47 |
| Msa0486870 | Msa0604640 | 0.807849 | 4.134683e-50 | -8.615850e-47 |
| Msa0488900 | Msa0604640 | 0.809576 | 1.767348e-50 | -8.615850e-47 |
| Msa0496460 | Msa0604640 | 0.836968 | 6.854318e-57 | -8.615850e-47 |
| Msa0496470 | Msa0604640 | 0.804365 | 2.237414e-49 | -8.615850e-47 |
| Msa0496570 | Msa0604640 | 0.843114 | 1.709185e-58 | -8.615850e-47 |
| Msa0500490 | Msa0604640 | 0.829009 | 6.543143e-55 | -8.615850e-47 |
| Msa0501350 | Msa0604640 | 0.812923 | 3.319799e-51 | -8.615850e-47 |
| Msa0505610 | Msa0604640 | 0.813160 | 2.945880e-51 | -8.615850e-47 |
| Msa0510660 | Msa0604640 | 0.809872 | 1.526198e-50 | -8.615850e-47 |
| Msa0510750 | Msa0604640 | 0.818702 | 1.707324e-52 | -8.615850e-47 |
| Msa0511600 | Msa0604640 | 0.816783 | 4.627509e-52 | -8.615850e-47 |
| Msa0517400 | Msa0604640 | 0.822919 | 1.830601e-53 | -8.615850e-47 |
| Msa0520810 | Msa0604640 | 0.859101 | 5.221041e-63 | -8.615850e-47 |
| Msa0521940 | Msa0604640 | -0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0549330 | Msa0604640 | 0.956289 | 4.188606e-114 | -8.615850e-47 |
| Msa0555510 | Msa0604640 | 0.810711 | 1.006170e-50 | -8.615850e-47 |
| Msa0572270 | Msa0604640 | 0.826009 | 3.432472e-54 | -8.615850e-47 |
| Msa0580540 | Msa0604640 | 0.838174 | 3.364351e-57 | -8.615850e-47 |
| Msa0595240 | Msa0604640 | 0.822652 | 2.112702e-53 | -8.615850e-47 |
| Msa0595780 | Msa0604640 | 0.800348 | 1.503019e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604640 | MtrunA17_Chr4g0033641 | 90.494 | 263 | 2 | 1 | 1 | 263 | 1 | 240 | 2.59e-173 | 477 |
| Msa0604640 | MtrunA17_Chr2g0329511 | 63.296 | 267 | 70 | 4 | 1 | 263 | 1 | 243 | 2.38e-111 | 320 |
| Msa0604640 | MtrunA17_Chr2g0314671 | 34.884 | 301 | 131 | 10 | 1 | 263 | 1 | 274 | 1.82e-44 | 152 |
| Msa0604640 | MtrunA17_Chr1g0155811 | 33.688 | 282 | 147 | 9 | 1 | 263 | 1 | 261 | 6.56e-36 | 129 |
| Msa0604640 | MtrunA17_Chr3g0145061 | 54.717 | 106 | 47 | 1 | 1 | 105 | 1 | 106 | 2.21e-35 | 126 |
| Msa0604640 | MtrunA17_Chr4g0035651 | 49.558 | 113 | 56 | 1 | 1 | 112 | 1 | 113 | 2.37e-35 | 126 |
| Msa0604640 | MtrunA17_Chr3g0142221 | 52.830 | 106 | 48 | 1 | 1 | 104 | 1 | 106 | 1.68e-32 | 119 |
| Msa0604640 | MtrunA17_Chr5g0405151 | 42.537 | 134 | 71 | 4 | 1 | 131 | 1 | 131 | 9.78e-25 | 97.4 |
| Msa0604640 | MtrunA17_Chr7g0220721 | 43.478 | 92 | 43 | 1 | 5 | 96 | 26 | 108 | 9.30e-19 | 84.7 |
| Msa0604640 | MtrunA17_Chr1g0150471 | 27.600 | 250 | 147 | 5 | 5 | 236 | 6 | 239 | 1.01e-18 | 84.0 |
| Msa0604640 | MtrunA17_Chr3g0136701 | 43.750 | 96 | 45 | 1 | 5 | 100 | 6 | 92 | 1.84e-18 | 82.8 |
| Msa0604640 | MtrunA17_Chr4g0072871 | 39.130 | 92 | 47 | 1 | 5 | 96 | 22 | 104 | 1.11e-16 | 79.0 |
| Msa0604640 | MtrunA17_Chr7g0268691 | 41.837 | 98 | 47 | 2 | 5 | 102 | 20 | 107 | 1.16e-15 | 75.9 |
| Msa0604640 | MtrunA17_Chr5g0429341 | 35.417 | 96 | 53 | 1 | 1 | 96 | 1 | 87 | 6.80e-14 | 70.9 |
| Msa0604640 | MtrunA17_Chr3g0120711 | 38.542 | 96 | 49 | 2 | 1 | 96 | 1 | 86 | 1.24e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0604640 | AT1G06040.1 | 58.364 | 269 | 85 | 5 | 1 | 263 | 1 | 248 | 5.13e-101 | 295 |
| Msa0604640 | AT2G31380.1 | 55.263 | 266 | 88 | 7 | 1 | 263 | 1 | 238 | 1.41e-89 | 265 |
| Msa0604640 | AT1G06040.2 | 66.071 | 168 | 51 | 3 | 1 | 162 | 1 | 168 | 3.36e-70 | 214 |
| Msa0604640 | AT1G78600.1 | 56.800 | 125 | 52 | 1 | 1 | 125 | 1 | 123 | 1.36e-41 | 144 |
| Msa0604640 | AT1G78600.2 | 56.800 | 125 | 52 | 1 | 1 | 125 | 1 | 123 | 2.88e-41 | 144 |
| Msa0604640 | AT4G10240.1 | 47.619 | 147 | 64 | 4 | 1 | 141 | 1 | 140 | 4.34e-36 | 126 |
| Msa0604640 | AT1G75540.1 | 56.522 | 115 | 47 | 2 | 1 | 112 | 1 | 115 | 9.74e-36 | 130 |
| Msa0604640 | AT4G39070.1 | 45.890 | 146 | 76 | 2 | 1 | 145 | 1 | 144 | 1.73e-33 | 122 |
| Msa0604640 | AT2G21320.1 | 50.000 | 104 | 49 | 2 | 1 | 104 | 1 | 101 | 7.99e-25 | 97.4 |
| Msa0604640 | AT4G38960.1 | 42.424 | 132 | 68 | 3 | 1 | 127 | 1 | 129 | 1.57e-24 | 97.1 |
| Msa0604640 | AT4G38960.6 | 42.424 | 132 | 68 | 3 | 1 | 127 | 1 | 129 | 1.57e-24 | 97.1 |
| Msa0604640 | AT5G15850.1 | 33.143 | 175 | 90 | 4 | 5 | 163 | 12 | 175 | 1.11e-19 | 87.4 |
| Msa0604640 | AT2G24790.2 | 43.478 | 92 | 43 | 1 | 5 | 96 | 8 | 90 | 1.82e-18 | 82.0 |
| Msa0604640 | AT2G24790.1 | 43.478 | 92 | 43 | 1 | 5 | 96 | 8 | 90 | 2.08e-18 | 83.2 |
| Msa0604640 | AT3G02380.1 | 43.478 | 92 | 43 | 1 | 5 | 96 | 16 | 98 | 1.74e-17 | 81.3 |
| Msa0604640 | AT5G15840.1 | 35.200 | 125 | 72 | 1 | 5 | 129 | 20 | 135 | 2.56e-17 | 80.9 |
| Msa0604640 | AT5G15840.2 | 35.200 | 125 | 72 | 1 | 5 | 129 | 20 | 135 | 2.65e-17 | 79.7 |
| Msa0604640 | AT5G24930.1 | 41.667 | 96 | 47 | 1 | 5 | 100 | 6 | 92 | 9.35e-17 | 79.3 |
| Msa0604640 | AT4G38960.3 | 32.000 | 175 | 68 | 4 | 1 | 127 | 1 | 172 | 1.03e-16 | 77.4 |
| Msa0604640 | AT2G47890.1 | 42.353 | 85 | 40 | 1 | 5 | 89 | 13 | 88 | 2.89e-14 | 72.0 |
| Msa0604640 | AT2G47890.3 | 42.353 | 85 | 40 | 1 | 5 | 89 | 13 | 88 | 3.05e-14 | 71.6 |
| Msa0604640 | AT2G47890.2 | 42.353 | 85 | 40 | 1 | 5 | 89 | 13 | 88 | 5.48e-14 | 70.1 |
| Msa0604640 | AT1G28050.1 | 34.653 | 101 | 57 | 1 | 2 | 102 | 6 | 97 | 5.29e-13 | 68.6 |
| Msa0604640 | AT1G68190.2 | 34.375 | 96 | 52 | 2 | 1 | 96 | 39 | 123 | 1.26e-12 | 67.4 |
| Msa0604640 | AT1G68190.1 | 34.375 | 96 | 52 | 2 | 1 | 96 | 10 | 94 | 1.40e-12 | 67.0 |
| Msa0604640 | AT1G68190.3 | 34.375 | 96 | 52 | 2 | 1 | 96 | 10 | 94 | 1.40e-12 | 67.0 |
| Msa0604640 | AT2G33500.2 | 34.000 | 100 | 57 | 1 | 3 | 102 | 10 | 100 | 1.71e-12 | 67.0 |
| Msa0604640 | AT2G33500.1 | 34.000 | 100 | 57 | 1 | 3 | 102 | 10 | 100 | 1.73e-12 | 67.0 |
| Msa0604640 | AT3G07650.3 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 2.85e-12 | 66.2 |
| Msa0604640 | AT3G07650.2 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 2.85e-12 | 66.2 |
| Msa0604640 | AT3G07650.4 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 2.85e-12 | 66.2 |
| Msa0604640 | AT3G07650.1 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 2.85e-12 | 66.2 |
| Msa0604640 | AT5G57660.1 | 33.333 | 93 | 49 | 2 | 4 | 96 | 21 | 100 | 3.08e-11 | 63.2 |
| Msa0604640 | AT5G48250.1 | 32.653 | 98 | 55 | 2 | 1 | 96 | 1 | 89 | 3.41e-11 | 63.2 |
Find 91 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTAGCTGGTAGTCTTTC+TGG | 0.109250 | 4_2:-50272851 | Msa0604640:CDS |
| TTGGGCTGTTGATGATTTCT+TGG | 0.216145 | 4_2:-50272669 | Msa0604640:CDS |
| TGTTATCTTGAAGACCATTT+TGG | 0.227854 | 4_2:-50271531 | Msa0604640:three_prime_UTR |
| TGCTCTATGTTCCTTAAGTA+TGG | 0.249200 | 4_2:+50271440 | None:intergenic |
| GATGATTTCTTGGAATTAAC+TGG | 0.278064 | 4_2:-50272659 | Msa0604640:CDS |
| TATAATATTCCAAACCCTTT+TGG | 0.279477 | 4_2:+50274081 | None:intergenic |
| TGGCTTTGTGGTGTTGGCTT+GGG | 0.286794 | 4_2:-50272412 | Msa0604640:CDS |
| CAGAAGCAATCCATGGAGTT+TGG | 0.289917 | 4_2:-50272053 | Msa0604640:CDS |
| TTGGCTTTGTGGTGTTGGCT+TGG | 0.298679 | 4_2:-50272413 | Msa0604640:CDS |
| ACTTGGCAGATATCACATTT+AGG | 0.310599 | 4_2:+50273837 | None:intergenic |
| GTAAGACATATAAGATTTAG+AGG | 0.311347 | 4_2:+50271908 | None:intergenic |
| TCACACCCTCCATGCAATAT+TGG | 0.314951 | 4_2:-50271583 | Msa0604640:three_prime_UTR |
| TTATGTTGTGTATGGTACTA+TGG | 0.330811 | 4_2:-50271555 | Msa0604640:three_prime_UTR |
| ACACTGCCAGCATGCATTAC+TGG | 0.340744 | 4_2:+50271945 | None:intergenic |
| TACCGGTATCCGTGTGGCTT+TGG | 0.344898 | 4_2:-50272807 | Msa0604640:CDS |
| ACGGGAACTTGTTGCGTGTC+TGG | 0.356267 | 4_2:+50272734 | None:intergenic |
| AAAATAGTCAAAAGTATTGA+TGG | 0.360457 | 4_2:+50274116 | None:intergenic |
| TTGGGTTGGCTTTGTGGTGT+TGG | 0.360864 | 4_2:-50272418 | Msa0604640:CDS |
| AGCGTAGAATTATACCTTAA+AGG | 0.365074 | 4_2:-50271657 | Msa0604640:three_prime_UTR |
| TAAAGTTGTCTTACCTTGTC+TGG | 0.367338 | 4_2:+50272626 | None:intergenic |
| ACCAACTTGGGTTGGCTTTG+TGG | 0.367775 | 4_2:-50272424 | Msa0604640:CDS |
| TGCCTAGTTTCGCATCCTCT+TGG | 0.378192 | 4_2:-50272688 | Msa0604640:CDS |
| CACACCCTCCATGCAATATT+GGG | 0.380893 | 4_2:-50271582 | Msa0604640:three_prime_UTR |
| GCCTAGTTTCGCATCCTCTT+GGG | 0.385410 | 4_2:-50272687 | Msa0604640:CDS |
| CTCATCCATCTACAGATTCA+TGG | 0.393449 | 4_2:+50271785 | None:intergenic |
| CAAAACTGCTATAAGTACTA+TGG | 0.400726 | 4_2:-50271419 | Msa0604640:three_prime_UTR |
| AGACTACCAGCTACATGAAT+TGG | 0.402532 | 4_2:+50272857 | None:intergenic |
| AAGAGGTGTTGGATTTGATA+AGG | 0.412876 | 4_2:-50274027 | Msa0604640:five_prime_UTR |
| CTAAACCTTCCTGAGGAAAC+TGG | 0.421815 | 4_2:+50271991 | None:intergenic |
| GTGTAGCAATTATACCAAAA+TGG | 0.430154 | 4_2:+50271517 | None:intergenic |
| ATTAACTTGATCCATACTTA+AGG | 0.430475 | 4_2:-50271451 | Msa0604640:three_prime_UTR |
| TAAGATTTAGAGGCTTTGTA+AGG | 0.437114 | 4_2:+50271918 | None:intergenic |
| CGATGATGATGAGCACTTCA+TGG | 0.441777 | 4_2:-50271853 | Msa0604640:CDS |
| TGAGTGAATGGAATATGTTT+TGG | 0.446035 | 4_2:+50274190 | None:intergenic |
| CATGTGCTTTAGCCGAGATC+TGG | 0.447542 | 4_2:+50271828 | None:intergenic |
| TGGAGTTTGGAGAGCTTGAA+TGG | 0.451045 | 4_2:-50272040 | Msa0604640:CDS |
| TGGGTAGTTTATGTTGTGTA+TGG | 0.451498 | 4_2:-50271563 | Msa0604640:three_prime_UTR |
| ATCTGTGAAGGAAACCAACT+TGG | 0.459264 | 4_2:-50272437 | Msa0604640:intron |
| TGTTGCGTGTCTGGATTAGA+TGG | 0.466529 | 4_2:+50272743 | None:intergenic |
| CTGTTCCATGAATCTGTAGA+TGG | 0.473976 | 4_2:-50271790 | Msa0604640:three_prime_UTR |
| AGCCAAAGCCACACGGATAC+CGG | 0.489165 | 4_2:+50272805 | None:intergenic |
| AAAGGTATTAAAACTTTGCA+TGG | 0.491551 | 4_2:-50271639 | Msa0604640:three_prime_UTR |
| GCACAACAAATCACCGTAGC+AGG | 0.495596 | 4_2:+50273966 | None:intergenic |
| ACAGATTCATGGAACAGAAC+AGG | 0.495779 | 4_2:+50271796 | None:intergenic |
| CTGGATTAGATGGTTCAACT+TGG | 0.497438 | 4_2:+50272753 | None:intergenic |
| TGTGCTCCTCTCAAGGTCTC+AGG | 0.497594 | 4_2:-50272380 | Msa0604640:intron |
| TTTCAATGACCAGTTTCCTC+AGG | 0.500064 | 4_2:-50272000 | Msa0604640:CDS |
| CTGAGGAGGAGAAACTTTGA+CGG | 0.504586 | 4_2:+50272715 | None:intergenic |
| CACTTCATGGTGCCAGATCT+CGG | 0.507917 | 4_2:-50271840 | Msa0604640:CDS |
| TACCGGTAGCAAGGAAGCGC+TGG | 0.512715 | 4_2:+50272822 | None:intergenic |
| CTTGAATGGCTATCGGATGC+AGG | 0.516958 | 4_2:-50272026 | Msa0604640:CDS |
| TGAAGGAAACCAACTTGGGT+TGG | 0.518535 | 4_2:-50272432 | Msa0604640:intron |
| TATTGGAAGAGAAGAGGTGT+TGG | 0.520050 | 4_2:-50274038 | Msa0604640:five_prime_UTR |
| CTTCGAGTGTGCTCCTCTCA+AGG | 0.520801 | 4_2:-50272387 | Msa0604640:CDS |
| TCAACACAAAATATGAAAGC+TGG | 0.522233 | 4_2:+50272914 | None:intergenic |
| GCCCAAGAGGATGCGAAACT+AGG | 0.529539 | 4_2:+50272686 | None:intergenic |
| TCATGTCGGACTTCAATCCT+AGG | 0.531676 | 4_2:+50271879 | None:intergenic |
| AGACCGAGCACTGTTCTGTA+AGG | 0.533969 | 4_2:-50272891 | Msa0604640:CDS |
| AGTGTGTGAATGAGAAGATA+AGG | 0.538140 | 4_2:+50274231 | None:intergenic |
| AGCTTGCTAGCAAGCATCAA+AGG | 0.550543 | 4_2:-50273890 | Msa0604640:CDS |
| TTCAAGCTCTCCAAACTCCA+TGG | 0.552963 | 4_2:+50272043 | None:intergenic |
| CACCAGCGCTTCCTTGCTAC+CGG | 0.553385 | 4_2:-50272824 | Msa0604640:CDS |
| ACCACAAAGCCAACCCAAGT+TGG | 0.555335 | 4_2:+50272423 | None:intergenic |
| TGGAGAGCTTGAATGGCTAT+CGG | 0.557707 | 4_2:-50272033 | Msa0604640:CDS |
| ATAAACTACCCAATATTGCA+TGG | 0.564087 | 4_2:+50271574 | None:intergenic |
| AAACTAGGCACTTGCTGAGG+AGG | 0.565089 | 4_2:+50272701 | None:intergenic |
| TGGTATAATTGCTACACTGA+GGG | 0.566135 | 4_2:-50271511 | Msa0604640:three_prime_UTR |
| CAACTTCCAGTAATGCATGC+TGG | 0.570734 | 4_2:-50271951 | Msa0604640:CDS |
| GATCATTGTTTACAATCTAG+AGG | 0.572052 | 4_2:-50271609 | Msa0604640:three_prime_UTR |
| TGAGGAGGAGAAACTTTGAC+GGG | 0.575513 | 4_2:+50272716 | None:intergenic |
| AATGACCAGTTTCCTCAGGA+AGG | 0.575639 | 4_2:-50271996 | Msa0604640:CDS |
| TAGTCAAAAGTATTGATGGA+TGG | 0.582591 | 4_2:+50274120 | None:intergenic |
| ACTACCCAATATTGCATGGA+GGG | 0.586758 | 4_2:+50271578 | None:intergenic |
| CATCATCATCGTCTTCATGT+CGG | 0.589449 | 4_2:+50271865 | None:intergenic |
| CGGTAGCAAGGAAGCGCTGG+TGG | 0.597801 | 4_2:+50272825 | None:intergenic |
| GAAATCATCAACAGCCCAAG+AGG | 0.601713 | 4_2:+50272673 | None:intergenic |
| ATGGAACAGAACAGGCGAGA+TGG | 0.604332 | 4_2:+50271804 | None:intergenic |
| GATGAACCAATTCATGTAGC+TGG | 0.610215 | 4_2:-50272863 | Msa0604640:CDS |
| TGGCTTTGATTCACCAGACA+AGG | 0.610663 | 4_2:-50272639 | Msa0604640:intron |
| GCATGCATTACTGGAAGTTG+CGG | 0.617995 | 4_2:+50271954 | None:intergenic |
| CCACACGGATACCGGTAGCA+AGG | 0.621121 | 4_2:+50272813 | None:intergenic |
| AACTAGAAGCCAAAGCCACA+CGG | 0.621527 | 4_2:+50272798 | None:intergenic |
| AGTCCTTACAGAACAGTGCT+CGG | 0.631276 | 4_2:+50272888 | None:intergenic |
| CCTTGCTACCGGTATCCGTG+TGG | 0.645262 | 4_2:-50272813 | Msa0604640:CDS |
| GCGAAACTAGGCACTTGCTG+AGG | 0.649769 | 4_2:+50272698 | None:intergenic |
| TTGGTATAATTGCTACACTG+AGG | 0.658332 | 4_2:-50271512 | Msa0604640:three_prime_UTR |
| ATCGAACCTGAGACCTTGAG+AGG | 0.672799 | 4_2:+50272374 | None:intergenic |
| AACTACCCAATATTGCATGG+AGG | 0.686860 | 4_2:+50271577 | None:intergenic |
| CTTGAGAGGAGCACACTCGA+AGG | 0.693421 | 4_2:+50272388 | None:intergenic |
| TCTGTGAAGGAAACCAACTT+GGG | 0.719623 | 4_2:-50272436 | Msa0604640:intron |
| GCTGCAGCTAAACCTTCCTG+AGG | 0.726877 | 4_2:+50271984 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTAAAATAATATTTT+TGG | - | chr4_2:50271728-50271747 | Msa0604640:three_prime_UTR | 0.0% |
| !! | AATTAAAAAAAAGACTTTAA+AGG | + | chr4_2:50271715-50271734 | None:intergenic | 10.0% |
| !!! | AATAATATATTGAATTTTGT+AGG | - | chr4_2:50271772-50271791 | Msa0604640:three_prime_UTR | 10.0% |
| !! | CAAATATTAAAACAATATAA+AGG | + | chr4_2:50273326-50273345 | None:intergenic | 10.0% |
| !!! | CTTTATATTGTTTTAATATT+TGG | - | chr4_2:50273324-50273343 | Msa0604640:intron | 10.0% |
| !! | GATAAACAGTTTAAAAATAT+TGG | - | chr4_2:50271367-50271386 | Msa0604640:three_prime_UTR | 15.0% |
| !! | AATAAATTATTATGAGAGTT+TGG | - | chr4_2:50271859-50271878 | Msa0604640:CDS | 15.0% |
| !! | CTTCTTATTCAAAATAAATA+GGG | + | chr4_2:50272236-50272255 | None:intergenic | 15.0% |
| !! | ATATTAAAACAATATAAAGG+AGG | + | chr4_2:50273323-50273342 | None:intergenic | 15.0% |
| !!! | AAAATAGTCAAAAGTATTGA+TGG | + | chr4_2:50271309-50271328 | None:intergenic | 20.0% |
| !!! | TCAATACTTTTGACTATTTT+TGG | - | chr4_2:50271309-50271328 | Msa0604640:three_prime_UTR | 20.0% |
| !!! | ATTTTGTAGGATTTAAGATT+AGG | - | chr4_2:50271785-50271804 | Msa0604640:three_prime_UTR | 20.0% |
| !!! | TTTTGTAGGATTTAAGATTA+GGG | - | chr4_2:50271786-50271805 | Msa0604640:three_prime_UTR | 20.0% |
| !! | TGTGCAAAAAAAAATAACAT+GGG | + | chr4_2:50271913-50271932 | None:intergenic | 20.0% |
| !! | ATGTGCAAAAAAAAATAACA+TGG | + | chr4_2:50271914-50271933 | None:intergenic | 20.0% |
| !! | GCTTCTTATTCAAAATAAAT+AGG | + | chr4_2:50272237-50272256 | None:intergenic | 20.0% |
| !!! | TCTGTTTATATGAATTTTTG+AGG | - | chr4_2:50273197-50273216 | Msa0604640:intron | 20.0% |
| !! | TACTGTTAACATAATCATAA+AGG | + | chr4_2:50273284-50273303 | None:intergenic | 20.0% |
| !!! | AAAAATGTCATTTTTGTTGA+CGG | + | chr4_2:50274112-50274131 | None:intergenic | 20.0% |
| !! | TCAAAAAAATCATTGTAAGT+TGG | - | chr4_2:50274178-50274197 | Msa0604640:five_prime_UTR | 20.0% |
| !! | TATAATATTCCAAACCCTTT+TGG | + | chr4_2:50271344-50271363 | None:intergenic | 25.0% |
| ! | TAAAAATATTGGAAGAGAAG+AGG | - | chr4_2:50271378-50271397 | Msa0604640:three_prime_UTR | 25.0% |
| ! | AAAATCTTCATGAATCTACA+TGG | + | chr4_2:50271957-50271976 | None:intergenic | 25.0% |
| ! | ATGCTATAATTGTCTTTGAT+TGG | - | chr4_2:50272020-50272039 | Msa0604640:CDS | 25.0% |
| ! | ATAATTGTCTTTGATTGGAT+TGG | - | chr4_2:50272025-50272044 | Msa0604640:CDS | 25.0% |
| !!! | AAGACATTGATTTCTATCTA+TGG | + | chr4_2:50272081-50272100 | None:intergenic | 25.0% |
| ! | ATAGATAGAAATCAATGTCT+TGG | - | chr4_2:50272080-50272099 | Msa0604640:intron | 25.0% |
| ! | AATCAATGTCTTGGAATAAA+TGG | - | chr4_2:50272089-50272108 | Msa0604640:intron | 25.0% |
| !!! | ATTTTGAATAAGAAGCATCT+AGG | - | chr4_2:50272241-50272260 | Msa0604640:intron | 25.0% |
| ! | ATCCTATAGTTATAAGATGA+AGG | + | chr4_2:50272485-50272504 | None:intergenic | 25.0% |
| ! | TGAGAGATTATGATTTATGA+TGG | - | chr4_2:50272874-50272893 | Msa0604640:CDS | 25.0% |
| !! | AGATTATGATTTATGATGGA+GGG | - | chr4_2:50272878-50272897 | Msa0604640:CDS | 25.0% |
| ! | CATTATTTCATTAAACGAAC+TGG | + | chr4_2:50273125-50273144 | None:intergenic | 25.0% |
| ! | TCATATAAACAGAAACCAAA+CGG | + | chr4_2:50273190-50273209 | None:intergenic | 25.0% |
| ! | GTAAGACATATAAGATTTAG+AGG | + | chr4_2:50273517-50273536 | None:intergenic | 25.0% |
| !!! | GCAAAGTTTTAATACCTTTA+AGG | + | chr4_2:50273782-50273801 | None:intergenic | 25.0% |
| !!! | AAAGGTATTAAAACTTTGCA+TGG | - | chr4_2:50273783-50273802 | Msa0604640:intron | 25.0% |
| !! | ATTAACTTGATCCATACTTA+AGG | - | chr4_2:50273971-50273990 | Msa0604640:CDS | 25.0% |
| ! | TGAGTGAATGGAATATGTTT+TGG | + | chr4_2:50271235-50271254 | None:intergenic | 30.0% |
| ! | ATTGAAAAAGTGTGAGTGAA+TGG | + | chr4_2:50271247-50271266 | None:intergenic | 30.0% |
| !! | TAGTCAAAAGTATTGATGGA+TGG | + | chr4_2:50271305-50271324 | None:intergenic | 30.0% |
| !!! | TTTTGGCTTGAAAAACCAAA+AGG | - | chr4_2:50271326-50271345 | Msa0604640:three_prime_UTR | 30.0% |
| !! | TTTGGCTTGAAAAACCAAAA+GGG | - | chr4_2:50271327-50271346 | Msa0604640:three_prime_UTR | 30.0% |
| AGCAAAAACAAAACCATACT+TGG | + | chr4_2:50271605-50271624 | None:intergenic | 30.0% | |
| !! | ACACTTTTGATCGATTCTTT+AGG | + | chr4_2:50272206-50272225 | None:intergenic | 30.0% |
| AATGCTAAATCTGATGTACT+GGG | + | chr4_2:50272283-50272302 | None:intergenic | 30.0% | |
| AAATGCTAAATCTGATGTAC+TGG | + | chr4_2:50272284-50272303 | None:intergenic | 30.0% | |
| AAAATTGCAATATTCGGATC+GGG | + | chr4_2:50272374-50272393 | None:intergenic | 30.0% | |
| GAAAATTGCAATATTCGGAT+CGG | + | chr4_2:50272375-50272394 | None:intergenic | 30.0% | |
| CGAAACACAATTCAAAATTC+CGG | + | chr4_2:50272399-50272418 | None:intergenic | 30.0% | |
| ! | TTTTGAATTGTGTTTCGAAC+TGG | - | chr4_2:50272402-50272421 | Msa0604640:CDS | 30.0% |
| !!! | ATGGATGATTTTACTGACTT+TGG | - | chr4_2:50272459-50272478 | Msa0604640:intron | 30.0% |
| TCAACACAAAATATGAAAGC+TGG | + | chr4_2:50272511-50272530 | None:intergenic | 30.0% | |
| GATGATTTCTTGGAATTAAC+TGG | - | chr4_2:50272763-50272782 | Msa0604640:CDS | 30.0% | |
| GAGATTATGATTTATGATGG+AGG | - | chr4_2:50272877-50272896 | Msa0604640:CDS | 30.0% | |
| ! | TGTTGATAAATGATCTGTGA+AGG | - | chr4_2:50272973-50272992 | Msa0604640:intron | 30.0% |
| ! | TTGCTTCTGAAAAGAAAGAA+AGG | + | chr4_2:50273358-50273377 | None:intergenic | 30.0% |
| ! | TAAGATTTAGAGGCTTTGTA+AGG | + | chr4_2:50273507-50273526 | None:intergenic | 30.0% |
| ATATGTCTTACAAAAAGCCT+AGG | - | chr4_2:50273526-50273545 | Msa0604640:intron | 30.0% | |
| AGCGTAGAATTATACCTTAA+AGG | - | chr4_2:50273765-50273784 | Msa0604640:intron | 30.0% | |
| GATCATTGTTTACAATCTAG+AGG | - | chr4_2:50273813-50273832 | Msa0604640:intron | 30.0% | |
| ATAAACTACCCAATATTGCA+TGG | + | chr4_2:50273851-50273870 | None:intergenic | 30.0% | |
| TTATGTTGTGTATGGTACTA+TGG | - | chr4_2:50273867-50273886 | Msa0604640:CDS | 30.0% | |
| ! | TGTTATCTTGAAGACCATTT+TGG | - | chr4_2:50273891-50273910 | Msa0604640:CDS | 30.0% |
| GTGTAGCAATTATACCAAAA+TGG | + | chr4_2:50273908-50273927 | None:intergenic | 30.0% | |
| CAAAACTGCTATAAGTACTA+TGG | - | chr4_2:50274003-50274022 | Msa0604640:exon | 30.0% | |
| ! | TTCTTTTGTCATGTGATACA+TGG | + | chr4_2:50274242-50274261 | None:intergenic | 30.0% |
| AGTGTGTGAATGAGAAGATA+AGG | + | chr4_2:50271194-50271213 | None:intergenic | 35.0% | |
| CTTGAAAAACCAAAAGGGTT+TGG | - | chr4_2:50271332-50271351 | Msa0604640:three_prime_UTR | 35.0% | |
| !! | AAGAGGTGTTGGATTTGATA+AGG | - | chr4_2:50271395-50271414 | Msa0604640:three_prime_UTR | 35.0% |
| ACTTGGCAGATATCACATTT+AGG | + | chr4_2:50271588-50271607 | None:intergenic | 35.0% | |
| AATGTGATATCTGCCAAGTA+TGG | - | chr4_2:50271589-50271608 | Msa0604640:three_prime_UTR | 35.0% | |
| CCGGTGAAAATTGCAATATT+CGG | + | chr4_2:50272380-50272399 | None:intergenic | 35.0% | |
| ! | CCGAATATTGCAATTTTCAC+CGG | - | chr4_2:50272377-50272396 | Msa0604640:intron | 35.0% |
| ! | GTTGAAGTATTTGCTGAACA+TGG | - | chr4_2:50272440-50272459 | Msa0604640:intron | 35.0% |
| GGCCTTCATCTTATAACTAT+AGG | - | chr4_2:50272480-50272499 | Msa0604640:intron | 35.0% | |
| !! | TTGGCTTTTCTCATTGTCTT+TGG | + | chr4_2:50272653-50272672 | None:intergenic | 35.0% |
| TAAAGTTGTCTTACCTTGTC+TGG | + | chr4_2:50272799-50272818 | None:intergenic | 35.0% | |
| ! | TTCTTTTCAGAAGCAATCCA+TGG | - | chr4_2:50273362-50273381 | Msa0604640:intron | 35.0% |
| TGGGTAGTTTATGTTGTGTA+TGG | - | chr4_2:50273859-50273878 | Msa0604640:CDS | 35.0% | |
| TTGGTATAATTGCTACACTG+AGG | - | chr4_2:50273910-50273929 | Msa0604640:CDS | 35.0% | |
| TGGTATAATTGCTACACTGA+GGG | - | chr4_2:50273911-50273930 | Msa0604640:CDS | 35.0% | |
| TGCTCTATGTTCCTTAAGTA+TGG | + | chr4_2:50273985-50274004 | None:intergenic | 35.0% | |
| ! | CACACTCGCTATATTTTGCA+TGG | - | chr4_2:50271208-50271227 | Msa0604640:three_prime_UTR | 40.0% |
| ! | TATTGGAAGAGAAGAGGTGT+TGG | - | chr4_2:50271384-50271403 | Msa0604640:three_prime_UTR | 40.0% |
| GATGATGTTGTGTTTGTAGC+AGG | - | chr4_2:50272111-50272130 | Msa0604640:intron | 40.0% | |
| !! | TAAGGGTTAGTCTAGTGGTA+TGG | + | chr4_2:50272165-50272184 | None:intergenic | 40.0% |
| ATACCACTAGACTAACCCTT+AGG | - | chr4_2:50272164-50272183 | Msa0604640:intron | 40.0% | |
| TACCACTAGACTAACCCTTA+GGG | - | chr4_2:50272165-50272184 | Msa0604640:intron | 40.0% | |
| !! | GATTCTCTAAAGCCATTGCA+CGG | + | chr4_2:50272352-50272371 | None:intergenic | 40.0% |
| GATGAACCAATTCATGTAGC+TGG | - | chr4_2:50272559-50272578 | Msa0604640:intron | 40.0% | |
| AGACTACCAGCTACATGAAT+TGG | + | chr4_2:50272568-50272587 | None:intergenic | 40.0% | |
| ! | CTGGATTAGATGGTTCAACT+TGG | + | chr4_2:50272672-50272691 | None:intergenic | 40.0% |
| !! | TTGGGCTGTTGATGATTTCT+TGG | - | chr4_2:50272753-50272772 | Msa0604640:CDS | 40.0% |
| ATCTGTGAAGGAAACCAACT+TGG | - | chr4_2:50272985-50273004 | Msa0604640:intron | 40.0% | |
| TCTGTGAAGGAAACCAACTT+GGG | - | chr4_2:50272986-50273005 | Msa0604640:intron | 40.0% | |
| CCAAACTAACCCACCAAAAT+GGG | + | chr4_2:50273085-50273104 | None:intergenic | 40.0% | |
| ACTTCGAACCATATTTGCAC+AGG | - | chr4_2:50273232-50273251 | Msa0604640:intron | 40.0% | |
| AACCATATTTGCACAGGCAA+TGG | - | chr4_2:50273238-50273257 | Msa0604640:intron | 40.0% | |
| TACCATTGCCTGTGCAAATA+TGG | + | chr4_2:50273243-50273262 | None:intergenic | 40.0% | |
| TATTTGCACAGGCAATGGTA+AGG | - | chr4_2:50273243-50273262 | Msa0604640:intron | 40.0% | |
| TTTCAATGACCAGTTTCCTC+AGG | - | chr4_2:50273422-50273441 | Msa0604640:intron | 40.0% | |
| CATCATCATCGTCTTCATGT+CGG | + | chr4_2:50273560-50273579 | None:intergenic | 40.0% | |
| ACAGATTCATGGAACAGAAC+AGG | + | chr4_2:50273629-50273648 | None:intergenic | 40.0% | |
| CTGTTCCATGAATCTGTAGA+TGG | - | chr4_2:50273632-50273651 | Msa0604640:intron | 40.0% | |
| CTCATCCATCTACAGATTCA+TGG | + | chr4_2:50273640-50273659 | None:intergenic | 40.0% | |
| ACTACCCAATATTGCATGGA+GGG | + | chr4_2:50273847-50273866 | None:intergenic | 40.0% | |
| AACTACCCAATATTGCATGG+AGG | + | chr4_2:50273848-50273867 | None:intergenic | 40.0% | |
| GTGTGAAAAAGCTCCTGCTA+CGG | - | chr4_2:50271443-50271462 | Msa0604640:three_prime_UTR | 45.0% | |
| !! | AGCTTGCTAGCAAGCATCAA+AGG | - | chr4_2:50271532-50271551 | Msa0604640:three_prime_UTR | 45.0% |
| CAGGAATCGAACCCTTTCTT+CGG | - | chr4_2:50272130-50272149 | Msa0604640:intron | 45.0% | |
| ATGTCCTATTCGTGCCCTAA+GGG | + | chr4_2:50272182-50272201 | None:intergenic | 45.0% | |
| AAAGCCATTGCACGGTGTAA+CGG | + | chr4_2:50272344-50272363 | None:intergenic | 45.0% | |
| AGTCCTTACAGAACAGTGCT+CGG | + | chr4_2:50272537-50272556 | None:intergenic | 45.0% | |
| CATGTAGCTGGTAGTCTTTC+TGG | - | chr4_2:50272571-50272590 | Msa0604640:intron | 45.0% | |
| AACTAGAAGCCAAAGCCACA+CGG | + | chr4_2:50272627-50272646 | None:intergenic | 45.0% | |
| ! | TGTTGCGTGTCTGGATTAGA+TGG | + | chr4_2:50272682-50272701 | None:intergenic | 45.0% |
| TGAGGAGGAGAAACTTTGAC+GGG | + | chr4_2:50272709-50272728 | None:intergenic | 45.0% | |
| CTGAGGAGGAGAAACTTTGA+CGG | + | chr4_2:50272710-50272729 | None:intergenic | 45.0% | |
| GAAATCATCAACAGCCCAAG+AGG | + | chr4_2:50272752-50272771 | None:intergenic | 45.0% | |
| !! | TGGCTTTGATTCACCAGACA+AGG | - | chr4_2:50272783-50272802 | Msa0604640:CDS | 45.0% |
| TGAAGGAAACCAACTTGGGT+TGG | - | chr4_2:50272990-50273009 | Msa0604640:intron | 45.0% | |
| TAACCCACCAAAATGGGTAC+CGG | + | chr4_2:50273079-50273098 | None:intergenic | 45.0% | |
| !!! | CCCATTTTGGTGGGTTAGTT+TGG | - | chr4_2:50273082-50273101 | Msa0604640:intron | 45.0% |
| GCCAAACTAACCCACCAAAA+TGG | + | chr4_2:50273086-50273105 | None:intergenic | 45.0% | |
| !! | GGGTTAGTTTGGCTCTATGA+AGG | - | chr4_2:50273093-50273112 | Msa0604640:intron | 45.0% |
| TACACACTAACTCTGCCGTT+TGG | - | chr4_2:50273172-50273191 | Msa0604640:intron | 45.0% | |
| CAGAAGCAATCCATGGAGTT+TGG | - | chr4_2:50273369-50273388 | Msa0604640:intron | 45.0% | |
| TTCAAGCTCTCCAAACTCCA+TGG | + | chr4_2:50273382-50273401 | None:intergenic | 45.0% | |
| TGGAGTTTGGAGAGCTTGAA+TGG | - | chr4_2:50273382-50273401 | Msa0604640:intron | 45.0% | |
| TGGAGAGCTTGAATGGCTAT+CGG | - | chr4_2:50273389-50273408 | Msa0604640:intron | 45.0% | |
| AATGACCAGTTTCCTCAGGA+AGG | - | chr4_2:50273426-50273445 | Msa0604640:intron | 45.0% | |
| CTAAACCTTCCTGAGGAAAC+TGG | + | chr4_2:50273434-50273453 | None:intergenic | 45.0% | |
| GCATGCATTACTGGAAGTTG+CGG | + | chr4_2:50273471-50273490 | None:intergenic | 45.0% | |
| CAACTTCCAGTAATGCATGC+TGG | - | chr4_2:50273471-50273490 | Msa0604640:intron | 45.0% | |
| TCATGTCGGACTTCAATCCT+AGG | + | chr4_2:50273546-50273565 | None:intergenic | 45.0% | |
| ! | CGATGATGATGAGCACTTCA+TGG | - | chr4_2:50273569-50273588 | Msa0604640:intron | 45.0% |
| TCACACCCTCCATGCAATAT+TGG | - | chr4_2:50273839-50273858 | Msa0604640:CDS | 45.0% | |
| CACACCCTCCATGCAATATT+GGG | - | chr4_2:50273840-50273859 | Msa0604640:CDS | 45.0% | |
| GCACAACAAATCACCGTAGC+AGG | + | chr4_2:50271459-50271478 | None:intergenic | 50.0% | |
| GGACTGAGACACCGAAGAAA+GGG | + | chr4_2:50272144-50272163 | None:intergenic | 50.0% | |
| TGGACTGAGACACCGAAGAA+AGG | + | chr4_2:50272145-50272164 | None:intergenic | 50.0% | |
| !! | TGCCCTAAGGGTTAGTCTAG+TGG | + | chr4_2:50272170-50272189 | None:intergenic | 50.0% |
| CTAACCCTTAGGGCACGAAT+AGG | - | chr4_2:50272175-50272194 | Msa0604640:intron | 50.0% | |
| CATGTCCTATTCGTGCCCTA+AGG | + | chr4_2:50272183-50272202 | None:intergenic | 50.0% | |
| AAGCCATTGCACGGTGTAAC+GGG | + | chr4_2:50272343-50272362 | None:intergenic | 50.0% | |
| ! | AGACCGAGCACTGTTCTGTA+AGG | - | chr4_2:50272531-50272550 | Msa0604640:intron | 50.0% |
| ! | AAACTAGGCACTTGCTGAGG+AGG | + | chr4_2:50272724-50272743 | None:intergenic | 50.0% |
| TGCCTAGTTTCGCATCCTCT+TGG | - | chr4_2:50272734-50272753 | Msa0604640:CDS | 50.0% | |
| GCCTAGTTTCGCATCCTCTT+GGG | - | chr4_2:50272735-50272754 | Msa0604640:CDS | 50.0% | |
| !! | ACCAACTTGGGTTGGCTTTG+TGG | - | chr4_2:50272998-50273017 | Msa0604640:intron | 50.0% |
| ACCACAAAGCCAACCCAAGT+TGG | + | chr4_2:50273002-50273021 | None:intergenic | 50.0% | |
| !! | TTGGGTTGGCTTTGTGGTGT+TGG | - | chr4_2:50273004-50273023 | Msa0604640:intron | 50.0% |
| !! | TTGGCTTTGTGGTGTTGGCT+TGG | - | chr4_2:50273009-50273028 | Msa0604640:intron | 50.0% |
| !! | TGGCTTTGTGGTGTTGGCTT+GGG | - | chr4_2:50273010-50273029 | Msa0604640:intron | 50.0% |
| ATCGAACCTGAGACCTTGAG+AGG | + | chr4_2:50273051-50273070 | None:intergenic | 50.0% | |
| ! | ATTCTCCCCGGTACCCATTT+TGG | - | chr4_2:50273069-50273088 | Msa0604640:intron | 50.0% |
| AACCCACCAAAATGGGTACC+GGG | + | chr4_2:50273078-50273097 | None:intergenic | 50.0% | |
| CTTGAATGGCTATCGGATGC+AGG | - | chr4_2:50273396-50273415 | Msa0604640:intron | 50.0% | |
| ACACTGCCAGCATGCATTAC+TGG | + | chr4_2:50273480-50273499 | None:intergenic | 50.0% | |
| ! | CACTTCATGGTGCCAGATCT+CGG | - | chr4_2:50273582-50273601 | Msa0604640:intron | 50.0% |
| CATGTGCTTTAGCCGAGATC+TGG | + | chr4_2:50273597-50273616 | None:intergenic | 50.0% | |
| ATGGAACAGAACAGGCGAGA+TGG | + | chr4_2:50273621-50273640 | None:intergenic | 50.0% | |
| !! | TTGCACGGTGTAACGGGTTG+TGG | + | chr4_2:50272337-50272356 | None:intergenic | 55.0% |
| CAACCCGTTACACCGTGCAA+TGG | - | chr4_2:50272337-50272356 | Msa0604640:intron | 55.0% | |
| TACCGGTATCCGTGTGGCTT+TGG | - | chr4_2:50272615-50272634 | Msa0604640:intron | 55.0% | |
| AGCCAAAGCCACACGGATAC+CGG | + | chr4_2:50272620-50272639 | None:intergenic | 55.0% | |
| !! | ACGGGAACTTGTTGCGTGTC+TGG | + | chr4_2:50272691-50272710 | None:intergenic | 55.0% |
| ! | GCGAAACTAGGCACTTGCTG+AGG | + | chr4_2:50272727-50272746 | None:intergenic | 55.0% |
| GCCCAAGAGGATGCGAAACT+AGG | + | chr4_2:50272739-50272758 | None:intergenic | 55.0% | |
| ! | CTTGAGAGGAGCACACTCGA+AGG | + | chr4_2:50273037-50273056 | None:intergenic | 55.0% |
| CTTCGAGTGTGCTCCTCTCA+AGG | - | chr4_2:50273035-50273054 | Msa0604640:intron | 55.0% | |
| TGTGCTCCTCTCAAGGTCTC+AGG | - | chr4_2:50273042-50273061 | Msa0604640:intron | 55.0% | |
| GTCTCAGGTTCGATTCTCCC+CGG | - | chr4_2:50273057-50273076 | Msa0604640:intron | 55.0% | |
| !! | TCCCCGGTACCCATTTTGGT+GGG | - | chr4_2:50273073-50273092 | Msa0604640:intron | 55.0% |
| ! | ACCCACCAAAATGGGTACCG+GGG | + | chr4_2:50273077-50273096 | None:intergenic | 55.0% |
| GCTGCAGCTAAACCTTCCTG+AGG | + | chr4_2:50273441-50273460 | None:intergenic | 55.0% | |
| CACCAGCGCTTCCTTGCTAC+CGG | - | chr4_2:50272598-50272617 | Msa0604640:intron | 60.0% | |
| ! | TACCGGTAGCAAGGAAGCGC+TGG | + | chr4_2:50272603-50272622 | None:intergenic | 60.0% |
| CCACACGGATACCGGTAGCA+AGG | + | chr4_2:50272612-50272631 | None:intergenic | 60.0% | |
| CCTTGCTACCGGTATCCGTG+TGG | - | chr4_2:50272609-50272628 | Msa0604640:intron | 60.0% | |
| ! | CTCCCCGGTACCCATTTTGG+TGG | - | chr4_2:50273072-50273091 | Msa0604640:intron | 60.0% |
| !! | CGGTAGCAAGGAAGCGCTGG+TGG | + | chr4_2:50272600-50272619 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 50271182 | 50274262 | 50271182 | ID=Msa0604640;Name=Msa0604640 |
| chr4_2 | mRNA | 50271182 | 50274262 | 50271182 | ID=Msa0604640-mRNA-1;Parent=Msa0604640;Name=Msa0604640-mRNA-1;_AED=0.12;_eAED=0.12;_QI=241|0.66|0.75|1|1|1|4|654|263 |
| chr4_2 | exon | 50271182 | 50272072 | 50271182 | ID=Msa0604640-mRNA-1:exon:11840;Parent=Msa0604640-mRNA-1 |
| chr4_2 | exon | 50272381 | 50272449 | 50272381 | ID=Msa0604640-mRNA-1:exon:11839;Parent=Msa0604640-mRNA-1 |
| chr4_2 | exon | 50272640 | 50272942 | 50272640 | ID=Msa0604640-mRNA-1:exon:11838;Parent=Msa0604640-mRNA-1 |
| chr4_2 | exon | 50273839 | 50274262 | 50273839 | ID=Msa0604640-mRNA-1:exon:11837;Parent=Msa0604640-mRNA-1 |
| chr4_2 | five_prime_UTR | 50274022 | 50274262 | 50274022 | ID=Msa0604640-mRNA-1:five_prime_utr;Parent=Msa0604640-mRNA-1 |
| chr4_2 | CDS | 50273839 | 50274021 | 50273839 | ID=Msa0604640-mRNA-1:cds;Parent=Msa0604640-mRNA-1 |
| chr4_2 | CDS | 50272640 | 50272942 | 50272640 | ID=Msa0604640-mRNA-1:cds;Parent=Msa0604640-mRNA-1 |
| chr4_2 | CDS | 50272381 | 50272449 | 50272381 | ID=Msa0604640-mRNA-1:cds;Parent=Msa0604640-mRNA-1 |
| chr4_2 | CDS | 50271836 | 50272072 | 50271836 | ID=Msa0604640-mRNA-1:cds;Parent=Msa0604640-mRNA-1 |
| chr4_2 | three_prime_UTR | 50271182 | 50271835 | 50271182 | ID=Msa0604640-mRNA-1:three_prime_utr;Parent=Msa0604640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
