AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0481050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481050 MtrunA17_Chr3g0133961 88.797 241 11 2 1 241 1 225 1.34e-138 388
Msa0481050 MtrunA17_Chr3g0134241 42.361 144 68 1 95 238 73 201 4.05e-36 126
Msa0481050 MtrunA17_Chr8g0353071 35.659 129 68 1 108 236 1892 2005 1.13e-23 99.4
Msa0481050 MtrunA17_Chr5g0398111 38.144 97 42 3 122 218 1371 1449 3.26e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481050 AT1G45230.1 70.504 139 26 1 102 240 95 218 9.78e-70 213
Msa0481050 AT1G45230.2 70.504 139 26 1 102 240 95 218 1.61e-68 210
Msa0481050 AT3G46630.1 43.382 136 62 1 103 238 86 206 2.42e-35 125
Msa0481050 AT2G40030.1 34.884 129 69 1 108 236 1736 1849 1.52e-20 90.9

Find 60 sgRNAs with CRISPR-Local

Find 707 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACTCAGTTATTATTTAT+TGG 0.193260 3_3:+86822193 None:intergenic
ACACCTAGAGCGATCAAAAT+TGG 0.221376 3_3:+86813250 None:intergenic
TTATTTATTGGACATTGTTT+TGG 0.272946 3_3:+86822205 None:intergenic
TGATTGGGAAGATCAGATTT+TGG 0.273498 3_3:-86821831 Msa0481050:CDS
TTCATATTGGAAATGCATAA+AGG 0.298841 3_3:-86813189 Msa0481050:CDS
GTTAGAACAATCCTTCATTC+TGG 0.300401 3_3:-86821782 Msa0481050:CDS
CGAGAAGAACGAAAAGAAAA+AGG 0.301719 3_3:+86822088 None:intergenic
ATGAAACTGTCTGCATATAA+TGG 0.319639 3_3:+86813146 None:intergenic
AGATATTGCCAATAATAAAA+TGG 0.338849 3_3:+86812869 None:intergenic
GTTTCATTCTCAGGCACTTC+AGG 0.339928 3_3:-86813130 Msa0481050:CDS
TGGCTAGTTTATCTTCTTGT+TGG 0.341526 3_3:-86822301 None:intergenic
TTCTACTTCCTCTTGTTGAT+AGG 0.367408 3_3:+86821889 None:intergenic
TCATATTGGAAATGCATAAA+GGG 0.369451 3_3:-86813188 Msa0481050:CDS
TTGGGGTAGGTGACAATTCC+AGG 0.375730 3_3:+86815092 None:intergenic
AACAAGATAAGTGGGTTGAT+TGG 0.378807 3_3:-86821847 Msa0481050:CDS
TATCTTCTTGTTGGTAATGT+TGG 0.389451 3_3:-86822292 Msa0481050:five_prime_UTR
TTTGGAAGATACCGTTCCTT+TGG 0.390892 3_3:-86821813 Msa0481050:CDS
TCATGCACTAGATATGAAAA+TGG 0.400058 3_3:-86820352 Msa0481050:intron
ACCATCATACTGAGTGCATT+GGG 0.409062 3_3:+86815074 None:intergenic
TTCTGAGATTCAGGGTGAAA+TGG 0.410731 3_3:+86820280 None:intergenic
ATGCAGACAGTTTCATTCTC+AGG 0.415645 3_3:-86813139 Msa0481050:CDS
ACAAGATAAGTGGGTTGATT+GGG 0.433929 3_3:-86821846 Msa0481050:CDS
AAACAATTTGCAAGGGAAAC+CGG 0.437923 3_3:-86821960 Msa0481050:CDS
CCTTTACCTTGTGAAAGAAC+CGG 0.453291 3_3:+86821941 None:intergenic
CACCTAGAGCGATCAAAATT+GGG 0.460298 3_3:+86813251 None:intergenic
GAACTTACTGTCCAGAATGA+AGG 0.464362 3_3:+86821771 None:intergenic
AAGAAGAAGAAGCTACTTTG+AGG 0.474047 3_3:+86821996 None:intergenic
TTCTCAGGCACTTCAGGAAG+CGG 0.475135 3_3:-86813124 Msa0481050:CDS
AGAAGAAGAAGCTACTTTGA+GGG 0.491159 3_3:+86821997 None:intergenic
CACCATCATACTGAGTGCAT+TGG 0.515797 3_3:+86815073 None:intergenic
CCGGTTCTTTCACAAGGTAA+AGG 0.518771 3_3:-86821941 Msa0481050:CDS
GAAGCTCAAAACAATTTGCA+AGG 0.519975 3_3:-86821968 Msa0481050:CDS
GAAGATACCGTTCCTTTGGT+TGG 0.535584 3_3:-86821809 Msa0481050:CDS
ACAGGGATTGCATACTTACC+TGG 0.556342 3_3:-86815110 Msa0481050:intron
GTACTGATGAACAAGATAAG+TGG 0.571949 3_3:-86821856 Msa0481050:CDS
ATGTTCATAGTGCGACAAGA+TGG 0.575213 3_3:-86813227 Msa0481050:CDS
TACTGATGAACAAGATAAGT+GGG 0.576952 3_3:-86821855 Msa0481050:CDS
TGGAAGGAGCTTCTCAACAA+TGG 0.580302 3_3:+86820300 None:intergenic
CTTTCTCAGTTATTGTTGCG+AGG 0.587883 3_3:+86822243 None:intergenic
GAGATTCAGGGTGAAATGGA+AGG 0.592660 3_3:+86820284 None:intergenic
AGTGCGACAAGATGGAGAGC+TGG 0.593516 3_3:-86813219 Msa0481050:CDS
CAGCTATTCCTATCAACAAG+AGG 0.600071 3_3:-86821897 Msa0481050:CDS
ACAAGGTAAAGGAGGAATTG+TGG 0.601286 3_3:-86821930 Msa0481050:CDS
CATACTGAGTGCATTGGGGT+AGG 0.611246 3_3:+86815079 None:intergenic
AACAAAACCAACCAAAGGAA+CGG 0.611291 3_3:+86821802 None:intergenic
AAGCTCAAAACAATTTGCAA+GGG 0.616378 3_3:-86821967 Msa0481050:CDS
GGGAAACCGGTTCTTTCACA+AGG 0.622484 3_3:-86821947 Msa0481050:CDS
GTTGCAAAATACTGAAGACA+TGG 0.626166 3_3:-86822164 Msa0481050:exon
TCTCAGTTATTGTTGCGAGG+TGG 0.631767 3_3:+86822246 None:intergenic
GTTCTAACAAAACCAACCAA+AGG 0.636609 3_3:+86821797 None:intergenic
TAATGTTGGCAAAGATCGCG+AGG 0.640210 3_3:-86822278 Msa0481050:five_prime_UTR
GTTCTTTCACAAGGTAAAGG+AGG 0.643061 3_3:-86821938 Msa0481050:CDS
GGAGTAATTCGCAGCATCCG+CGG 0.650499 3_3:+86812890 None:intergenic
ATGTGGAATCGATTATATCA+CGG 0.652788 3_3:-86820248 Msa0481050:intron
TAGAGCGATCAAAATTGGGA+TGG 0.653406 3_3:+86813255 None:intergenic
AAACGAGAATGAAGCAACTG+TGG 0.672031 3_3:+86822028 None:intergenic
CCATCATACTGAGTGCATTG+GGG 0.694550 3_3:+86815075 None:intergenic
AATGTTGGCAAAGATCGCGA+GGG 0.697379 3_3:-86822277 Msa0481050:five_prime_UTR
AGGTAAAGGAGGAATTGTGG+AGG 0.732379 3_3:-86821927 Msa0481050:CDS
TAACAACTCACTAATCGCCG+CGG 0.750848 3_3:-86812907 Msa0481050:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTACTTTTTTTTATTATCA+TGG - chr3_3:86813464-86813483 Msa0481050:intron 10.0%
!!! TTTTGATCTTTTAATATATA+AGG + chr3_3:86816385-86816404 None:intergenic 10.0%
!! TAATCTTAAGATATAATTTA+AGG + chr3_3:86818478-86818497 None:intergenic 10.0%
!! AATTATCCATATATAATTGA+GGG + chr3_3:86813435-86813454 None:intergenic 15.0%
!! AAATTATCCATATATAATTG+AGG + chr3_3:86813436-86813455 None:intergenic 15.0%
!!! TTTTTTATTATCATGGATTT+AGG - chr3_3:86813471-86813490 Msa0481050:intron 15.0%
!!! TGCAATAAAAATAATACTTT+TGG - chr3_3:86815030-86815049 Msa0481050:intron 15.0%
!!! GCAATAAAAATAATACTTTT+GGG - chr3_3:86815031-86815050 Msa0481050:intron 15.0%
!! TCAATTTAATATTAGATCAA+GGG + chr3_3:86815114-86815133 None:intergenic 15.0%
!! TTCAATTTAATATTAGATCA+AGG + chr3_3:86815115-86815134 None:intergenic 15.0%
!!! TTAATAAAAACTAACTCTTT+TGG + chr3_3:86815242-86815261 None:intergenic 15.0%
!!! TTTACAATTTTAACCTAATT+TGG - chr3_3:86815383-86815402 Msa0481050:intron 15.0%
!! AAAATAAATATAGAAGAGAT+AGG - chr3_3:86815937-86815956 Msa0481050:intron 15.0%
!! AATATACTCATTATTGATAT+AGG - chr3_3:86817167-86817186 Msa0481050:intron 15.0%
!! ATATACTCATTATTGATATA+GGG - chr3_3:86817168-86817187 Msa0481050:intron 15.0%
!!! AAGAATTTCAAATTTTTGTT+TGG + chr3_3:86817889-86817908 None:intergenic 15.0%
!! AATTCGGATATAAAAAAAAA+TGG + chr3_3:86818198-86818217 None:intergenic 15.0%
!! GTGAAAATAATGTTAAAAAA+AGG + chr3_3:86822138-86822157 None:intergenic 15.0%
!!! TTATTTATTGGACATTGTTT+TGG + chr3_3:86812970-86812989 None:intergenic 20.0%
!! CTAACTCAGTTATTATTTAT+TGG + chr3_3:86812982-86813001 None:intergenic 20.0%
!!! AAAAGAAAAAGGATTTTTGA+AGG + chr3_3:86813076-86813095 None:intergenic 20.0%
!! CAAAATCTTTCTCAATAAAT+TGG + chr3_3:86813586-86813605 None:intergenic 20.0%
!!! CAATTTATTGAGAAAGATTT+TGG - chr3_3:86813584-86813603 Msa0481050:intron 20.0%
!! TGACAAAGAGTTTAAATTTA+TGG + chr3_3:86814093-86814112 None:intergenic 20.0%
!!! AACCTTGTTAATTATTTTCA+TGG - chr3_3:86814740-86814759 Msa0481050:intron 20.0%
!! ATCCATGAAAATAATTAACA+AGG + chr3_3:86814745-86814764 None:intergenic 20.0%
!!! ATTTTTATTGCACTAAAAAC+AGG + chr3_3:86815022-86815041 None:intergenic 20.0%
!! TTATTAAAGATTAGCAAATC+AGG + chr3_3:86815423-86815442 None:intergenic 20.0%
!! AAAAAACCTATTTATACTAG+AGG + chr3_3:86815476-86815495 None:intergenic 20.0%
!! TACCTCAAATCTTAATTAAA+TGG + chr3_3:86815567-86815586 None:intergenic 20.0%
!! AGAAATGATTGTGATAATAT+TGG + chr3_3:86816046-86816065 None:intergenic 20.0%
!! AAACGATAACTTAGAAATAA+CGG + chr3_3:86816096-86816115 None:intergenic 20.0%
!! AATTGAGAAGAATAACAAAT+GGG + chr3_3:86816834-86816853 None:intergenic 20.0%
!! TAATTGAGAAGAATAACAAA+TGG + chr3_3:86816835-86816854 None:intergenic 20.0%
!!! ATAGATAATCTAAGATATCA+TGG + chr3_3:86817609-86817628 None:intergenic 20.0%
!! TTCGCTATATAATAATGATT+TGG - chr3_3:86817671-86817690 Msa0481050:intron 20.0%
!!! TTATAAGGTTTTAGATAAGA+AGG + chr3_3:86817784-86817803 None:intergenic 20.0%
!! AAAACCTTATAACATCAAAA+TGG - chr3_3:86817792-86817811 Msa0481050:intron 20.0%
!! CAAACAAACAAAATTTAAGA+TGG + chr3_3:86817942-86817961 None:intergenic 20.0%
!!! TTTTTTTTATATCCGAATTG+TGG - chr3_3:86818199-86818218 Msa0481050:intron 20.0%
!! TATATTTCATAGTGAAGATT+GGG + chr3_3:86818291-86818310 None:intergenic 20.0%
!! ATATATTTCATAGTGAAGAT+TGG + chr3_3:86818292-86818311 None:intergenic 20.0%
!!! TTGATAATAACAACGAAATA+TGG + chr3_3:86818505-86818524 None:intergenic 20.0%
!!! TGGAGTTTTGTATATAATTA+AGG - chr3_3:86818552-86818571 Msa0481050:intron 20.0%
!! TTAATGTTGTTAAAGCTATA+GGG + chr3_3:86818681-86818700 None:intergenic 20.0%
!! ATTAATGTTGTTAAAGCTAT+AGG + chr3_3:86818682-86818701 None:intergenic 20.0%
!!! AGAAGTTTTTTTTTTTTGCA+AGG - chr3_3:86819735-86819754 Msa0481050:intron 20.0%
!! TATATTTGTGTCCATATTAT+TGG - chr3_3:86820444-86820463 Msa0481050:intron 20.0%
!! ATATTTGTGTCCATATTATT+GGG - chr3_3:86820445-86820464 Msa0481050:intron 20.0%
!! TTATTCTTAAAGTTTAGCAA+GGG + chr3_3:86820780-86820799 None:intergenic 20.0%
!! TTTATTCTTAAAGTTTAGCA+AGG + chr3_3:86820781-86820800 None:intergenic 20.0%
!!! CTTTAAGAATAAAACCTATT+TGG - chr3_3:86820788-86820807 Msa0481050:intron 20.0%
!!! GATAAATGCATTATGAATTT+TGG - chr3_3:86821041-86821060 Msa0481050:intron 20.0%
!! TCTAGTTATACTTATTCAAA+TGG - chr3_3:86821373-86821392 Msa0481050:intron 20.0%
!!! ATGATAATGCTGTAATAATT+AGG - chr3_3:86821419-86821438 Msa0481050:intron 20.0%
!!! TTTTTACAGAATATAGAACA+CGG + chr3_3:86821575-86821594 None:intergenic 20.0%
!! CAATAATAGTACAAGAAAAA+TGG + chr3_3:86822166-86822185 None:intergenic 20.0%
!!! GAATTACTCCATTTTATTAT+TGG - chr3_3:86822295-86822314 Msa0481050:five_prime_UTR 20.0%
! TGATGTTGAATTTATTCAGA+AGG - chr3_3:86813517-86813536 Msa0481050:intron 25.0%
!! TTTATTGAGAAAGATTTTGG+TGG - chr3_3:86813587-86813606 Msa0481050:intron 25.0%
! TTAGAATCAAACATACACTT+TGG + chr3_3:86813653-86813672 None:intergenic 25.0%
! GATAAACATTGAGTATGATT+TGG + chr3_3:86813816-86813835 None:intergenic 25.0%
! TTAAATCACCACTAAATTTG+AGG - chr3_3:86813890-86813909 Msa0481050:intron 25.0%
! TAAATCACCACTAAATTTGA+GGG - chr3_3:86813891-86813910 Msa0481050:intron 25.0%
!!! TTGGAAGTATCATTTAGTTA+GGG - chr3_3:86814052-86814071 Msa0481050:intron 25.0%
! AAATGTTAAAAGTCCCAAAT+TGG - chr3_3:86814206-86814225 Msa0481050:intron 25.0%
! CTGAAGAAATGTTTATAACT+GGG - chr3_3:86814241-86814260 Msa0481050:intron 25.0%
! TGAAGAAATGTTTATAACTG+GGG - chr3_3:86814242-86814261 Msa0481050:intron 25.0%
! TTATTGCATACATAAAACCA+TGG + chr3_3:86814621-86814640 None:intergenic 25.0%
!! TGTTCTGTTTTCATTTATCT+TGG - chr3_3:86814770-86814789 Msa0481050:intron 25.0%
! TGCATTATTCAATTGACAAA+AGG - chr3_3:86814981-86815000 Msa0481050:intron 25.0%
! AGGTTAAAATTGTAAACGAT+TGG + chr3_3:86815379-86815398 None:intergenic 25.0%
! CAAATCTTAATTAAATGGCA+AGG + chr3_3:86815562-86815581 None:intergenic 25.0%
!! TGCCATTTAATTAAGATTTG+AGG - chr3_3:86815562-86815581 Msa0481050:intron 25.0%
!!! AAATTAATTTTGGAAACCTG+CGG + chr3_3:86815716-86815735 None:intergenic 25.0%
!! CTGAGATGCTAAATTAATTT+TGG + chr3_3:86815726-86815745 None:intergenic 25.0%
!! GATCAATATTGATTGTTGAA+TGG + chr3_3:86815862-86815881 None:intergenic 25.0%
! TCAATATTGATCTAAGTGTA+TGG - chr3_3:86815870-86815889 Msa0481050:intron 25.0%
!!! TTGTTATCTTTTAAGGGATT+TGG + chr3_3:86816131-86816150 None:intergenic 25.0%
!!! TCGACTTTGTTATCTTTTAA+GGG + chr3_3:86816137-86816156 None:intergenic 25.0%
!!! ATCGACTTTGTTATCTTTTA+AGG + chr3_3:86816138-86816157 None:intergenic 25.0%
! TAAAAGATAACAAAGTCGAT+CGG - chr3_3:86816138-86816157 Msa0481050:intron 25.0%
!!! AAAGGAGAAGGAAATTTTTT+TGG + chr3_3:86816708-86816727 None:intergenic 25.0%
! AGGTTACATATCTTTATAAG+GGG + chr3_3:86816742-86816761 None:intergenic 25.0%
! GAGGTTACATATCTTTATAA+GGG + chr3_3:86816743-86816762 None:intergenic 25.0%
! ATTTATGAGTAACTTTCAGA+AGG + chr3_3:86817150-86817169 None:intergenic 25.0%
!!! AGGTGAATTATTTGTTTTAG+TGG + chr3_3:86817434-86817453 None:intergenic 25.0%
!!! AATGCCATTTTGATGTTATA+AGG + chr3_3:86817799-86817818 None:intergenic 25.0%
!!! TTTTGTTTGGCTTAAAACTT+TGG + chr3_3:86817876-86817895 None:intergenic 25.0%
!!! TTTTGCATTATTTTTGTCTC+AGG - chr3_3:86818132-86818151 Msa0481050:intron 25.0%
! ATTTCTGTTAAGCAAAAGTT+GGG + chr3_3:86818231-86818250 None:intergenic 25.0%
! AATTTCTGTTAAGCAAAAGT+TGG + chr3_3:86818232-86818251 None:intergenic 25.0%
!! ACTTTTGCTTAACAGAAATT+TGG - chr3_3:86818232-86818251 Msa0481050:intron 25.0%
!! ATTAGTTTCTCTGTTTAACT+AGG - chr3_3:86818526-86818545 Msa0481050:intron 25.0%
! TATACTACAATTTACAATGG+TGG + chr3_3:86818705-86818724 None:intergenic 25.0%
! GGTTATACTACAATTTACAA+TGG + chr3_3:86818708-86818727 None:intergenic 25.0%
!!! AAACTGGTTTGTAAGTTAAT+GGG + chr3_3:86818951-86818970 None:intergenic 25.0%
! AATTTCTACTTAACCTTTGA+AGG + chr3_3:86819133-86819152 None:intergenic 25.0%
!!! AGTTTTTTTTTTTTGCAAGG+TGG - chr3_3:86819738-86819757 Msa0481050:intron 25.0%
!! ACATAGGCATTACAAATTTT+CGG + chr3_3:86819918-86819937 None:intergenic 25.0%
!!! GTTTTTCAAAATTGACTTGT+GGG + chr3_3:86820002-86820021 None:intergenic 25.0%
!!! AGTTTTTCAAAATTGACTTG+TGG + chr3_3:86820003-86820022 None:intergenic 25.0%
! CAATAAAATTATGGATTCCT+TGG - chr3_3:86820156-86820175 Msa0481050:intron 25.0%
!!! CTTCTAAAACTTTGTTAAGA+CGG + chr3_3:86820300-86820319 None:intergenic 25.0%
!!! GTCTTAACAAAGTTTTAGAA+GGG - chr3_3:86820299-86820318 Msa0481050:CDS 25.0%
! ACTTATGACTTATTTGTTTG+GGG + chr3_3:86820338-86820357 None:intergenic 25.0%
! GACTTATGACTTATTTGTTT+GGG + chr3_3:86820339-86820358 None:intergenic 25.0%
! TGACTTATGACTTATTTGTT+TGG + chr3_3:86820340-86820359 None:intergenic 25.0%
!! AGTGTATTTTGCAATTACTA+AGG + chr3_3:86820843-86820862 None:intergenic 25.0%
! TTTGAATGATTATCACATCA+CGG - chr3_3:86821077-86821096 Msa0481050:intron 25.0%
! TGCTGTAATAATTAGGTAAA+TGG - chr3_3:86821426-86821445 Msa0481050:intron 25.0%
! TCAAGATTAGAAAGCAAAAT+GGG + chr3_3:86821696-86821715 None:intergenic 25.0%
! TTCATATTGGAAATGCATAA+AGG - chr3_3:86821983-86822002 Msa0481050:CDS 25.0%
! TCATATTGGAAATGCATAAA+GGG - chr3_3:86821984-86822003 Msa0481050:CDS 25.0%
! ATAGTACAAGAAAAATGGAA+GGG + chr3_3:86822161-86822180 None:intergenic 25.0%
! AATAGTACAAGAAAAATGGA+AGG + chr3_3:86822162-86822181 None:intergenic 25.0%
!! TATCTTCTTGTTGGTAATGT+TGG - chr3_3:86812880-86812899 Msa0481050:three_prime_UTR 30.0%
!! ATGCAGTAGTATTTTTGTGT+TGG + chr3_3:86813046-86813065 None:intergenic 30.0%
AAGCTCAAAACAATTTGCAA+GGG - chr3_3:86813205-86813224 Msa0481050:CDS 30.0%
TACTGATGAACAAGATAAGT+GGG - chr3_3:86813317-86813336 Msa0481050:intron 30.0%
ACCTAACCCTCAATTATATA+TGG - chr3_3:86813426-86813445 Msa0481050:intron 30.0%
TCCATATATAATTGAGGGTT+AGG + chr3_3:86813430-86813449 None:intergenic 30.0%
!! GATCTTGAGTGAATTGATTT+TGG - chr3_3:86813685-86813704 Msa0481050:intron 30.0%
! TTTGGCTAAAAGTAAGTTGA+AGG - chr3_3:86813703-86813722 Msa0481050:intron 30.0%
TTAGTGGTGATTTAAGTGAT+TGG + chr3_3:86813885-86813904 None:intergenic 30.0%
! TCTGAAATCATATTTCACGA+AGG + chr3_3:86813957-86813976 None:intergenic 30.0%
GACATAGTATCTAAGAAAGT+TGG - chr3_3:86814033-86814052 Msa0481050:intron 30.0%
!! GTTGGAAGTATCATTTAGTT+AGG - chr3_3:86814051-86814070 Msa0481050:intron 30.0%
! TCACCTCTTGTATTTAAAAC+AGG - chr3_3:86814110-86814129 Msa0481050:intron 30.0%
!! CATCCTGTTTTAAATACAAG+AGG + chr3_3:86814116-86814135 None:intergenic 30.0%
CCAGTTATAAACATTTCTTC+AGG + chr3_3:86814243-86814262 None:intergenic 30.0%
CCTGAAGAAATGTTTATAAC+TGG - chr3_3:86814240-86814259 Msa0481050:intron 30.0%
GAAGAAATGTTTATAACTGG+GGG - chr3_3:86814243-86814262 Msa0481050:intron 30.0%
ATCTCTTAGAAATTGAGGTT+GGG + chr3_3:86814311-86814330 None:intergenic 30.0%
TACTCATCTCTTAGAAATTG+AGG + chr3_3:86814316-86814335 None:intergenic 30.0%
TTCTCTTAGAAATTGAGGTT+GGG + chr3_3:86814384-86814403 None:intergenic 30.0%
TACTCTTCTCTTAGAAATTG+AGG + chr3_3:86814389-86814408 None:intergenic 30.0%
TACTGATATGATGCTTGAAA+TGG - chr3_3:86814407-86814426 Msa0481050:intron 30.0%
TTTGCCATTCAATATTGCAA+AGG - chr3_3:86814490-86814509 Msa0481050:intron 30.0%
ACAACCTTTGCAATATTGAA+TGG + chr3_3:86814497-86814516 None:intergenic 30.0%
AATACCTGGGCAATATAAAA+TGG - chr3_3:86814521-86814540 Msa0481050:intron 30.0%
AATAATCAATGCAGTGAAGA+TGG - chr3_3:86814636-86814655 Msa0481050:intron 30.0%
ATAATCAATGCAGTGAAGAT+GGG - chr3_3:86814637-86814656 Msa0481050:intron 30.0%
CTAGTAAGTTATGTTGAGTT+TGG + chr3_3:86814673-86814692 None:intergenic 30.0%
TCATGCACTAGATATGAAAA+TGG - chr3_3:86814820-86814839 Msa0481050:intron 30.0%
!!! CAATCTTTTTCTGAGATTCA+GGG + chr3_3:86814903-86814922 None:intergenic 30.0%
ATGTGGAATCGATTATATCA+CGG - chr3_3:86814924-86814943 Msa0481050:intron 30.0%
!!! TTTTGGGTTTAGCAATCTAT+CGG - chr3_3:86815047-86815066 Msa0481050:intron 30.0%
! ATTGAAAATGCTTTGCTGTA+TGG - chr3_3:86815129-86815148 Msa0481050:intron 30.0%
TGGTCTTTCCAATAAATGAT+AGG - chr3_3:86815149-86815168 Msa0481050:intron 30.0%
AGGCAAATCCTATCATTTAT+TGG + chr3_3:86815160-86815179 None:intergenic 30.0%
TTGCACTTTAACCAGTTATT+GGG + chr3_3:86815196-86815215 None:intergenic 30.0%
TATGAGCCTCTAGTATAAAT+AGG - chr3_3:86815467-86815486 Msa0481050:intron 30.0%
!! AATTAATTTTGGAAACCTGC+GGG + chr3_3:86815715-86815734 None:intergenic 30.0%
ATTAATTTAGCATCTCAGTC+TGG - chr3_3:86815728-86815747 Msa0481050:intron 30.0%
ATGCTTTCAGATACTTAATC+AGG + chr3_3:86816187-86816206 None:intergenic 30.0%
CAAAGAGATTCAAGATGATT+TGG + chr3_3:86816313-86816332 None:intergenic 30.0%
!! ACATCATTTTGGGAGAATTT+TGG + chr3_3:86816597-86816616 None:intergenic 30.0%
GGAGGTTACATATCTTTATA+AGG + chr3_3:86816744-86816763 None:intergenic 30.0%
ATGAACTAGGTCACTTAAAA+AGG + chr3_3:86816765-86816784 None:intergenic 30.0%
AAAGGAAGAAAGAATGAACT+AGG + chr3_3:86816778-86816797 None:intergenic 30.0%
AGTCAAATAGTGTATTAGTG+TGG + chr3_3:86816962-86816981 None:intergenic 30.0%
CATTATTGATATAGGGACAT+TGG - chr3_3:86817175-86817194 Msa0481050:intron 30.0%
AGGAAAATAACGTGTATGAT+TGG + chr3_3:86817204-86817223 None:intergenic 30.0%
ATTTGCACAATCCTTTAACT+AGG + chr3_3:86817467-86817486 None:intergenic 30.0%
AATGACAAACAAGACAAAAC+TGG + chr3_3:86818170-86818189 None:intergenic 30.0%
!!! GTTTTGTCTTGTTTGTCATT+TGG - chr3_3:86818170-86818189 Msa0481050:intron 30.0%
TTTCTGTTAAGCAAAAGTTG+GGG + chr3_3:86818230-86818249 None:intergenic 30.0%
! CTCTTGTTCTAGATATGATT+TGG - chr3_3:86818261-86818280 Msa0481050:intron 30.0%
TTCTCTGTTTAACTAGGATT+TGG - chr3_3:86818532-86818551 Msa0481050:intron 30.0%
!!! TATAGGGTTTTAGATAAGGA+AGG + chr3_3:86818665-86818684 None:intergenic 30.0%
!!! AAGCTATAGGGTTTTAGATA+AGG + chr3_3:86818669-86818688 None:intergenic 30.0%
AGATTATTCTCATATAGTGG+AGG + chr3_3:86818817-86818836 None:intergenic 30.0%
GACAGATTATTCTCATATAG+TGG + chr3_3:86818820-86818839 None:intergenic 30.0%
TGAGAATAATCTGTCCAATA+AGG - chr3_3:86818825-86818844 Msa0481050:intron 30.0%
TAATCTGTCCAATAAGGTTT+AGG - chr3_3:86818831-86818850 Msa0481050:intron 30.0%
AGGATATTCCTAAACCTTAT+TGG + chr3_3:86818842-86818861 None:intergenic 30.0%
!! GAAACTGGTTTGTAAGTTAA+TGG + chr3_3:86818952-86818971 None:intergenic 30.0%
! GGAGGTTATTCACATTTTAT+GGG + chr3_3:86819178-86819197 None:intergenic 30.0%
ACTTTGCTGAAAAATGCTAT+AGG - chr3_3:86819302-86819321 Msa0481050:intron 30.0%
TAAGAACAGTAAAAGCCTTA+TGG + chr3_3:86819589-86819608 None:intergenic 30.0%
TCTCAATCACATCATATACA+AGG + chr3_3:86819663-86819682 None:intergenic 30.0%
! AGTGTTTTTCTTCAACATCT+TGG + chr3_3:86819806-86819825 None:intergenic 30.0%
AATTTGTAATGCCTATGTTG+AGG - chr3_3:86819920-86819939 Msa0481050:intron 30.0%
ATCCACTGGCAATAAAATTA+TGG - chr3_3:86820147-86820166 Msa0481050:intron 30.0%
! ATCCATAATTTTATTGCCAG+TGG + chr3_3:86820152-86820171 None:intergenic 30.0%
GGGATTATTAAAAACAATCC+TGG + chr3_3:86820195-86820214 None:intergenic 30.0%
!! TTTTAACTCTGTTCAACATG+AGG + chr3_3:86820248-86820267 None:intergenic 30.0%
AGAGTTAAAACTCAACCAAA+TGG - chr3_3:86820258-86820277 Msa0481050:CDS 30.0%
!!! CGTCTTAACAAAGTTTTAGA+AGG - chr3_3:86820298-86820317 Msa0481050:CDS 30.0%
!! AATTTTTGGGCCCAATAATA+TGG + chr3_3:86820458-86820477 None:intergenic 30.0%
ATATTATTGGGCCCAAAAAT+TGG - chr3_3:86820457-86820476 Msa0481050:intron 30.0%
ATGTCAATTCCTAACTATCA+TGG + chr3_3:86821021-86821040 None:intergenic 30.0%
AACTGAATTACTCAGATGTA+GGG + chr3_3:86821122-86821141 None:intergenic 30.0%
TAACTGAATTACTCAGATGT+AGG + chr3_3:86821123-86821142 None:intergenic 30.0%
AATCCTTAATCTCCATCTAA+TGG - chr3_3:86821155-86821174 Msa0481050:intron 30.0%
CTCAAGATTAGAAAGCAAAA+TGG + chr3_3:86821697-86821716 None:intergenic 30.0%
!! AGAACAGGTAGAATTTTAAC+GGG + chr3_3:86821795-86821814 None:intergenic 30.0%
! CAGAACAGGTAGAATTTTAA+CGG + chr3_3:86821796-86821815 None:intergenic 30.0%
ATGAAACTGTCTGCATATAA+TGG + chr3_3:86822029-86822048 None:intergenic 30.0%
TAGTACAAGAAAAATGGAAG+GGG + chr3_3:86822160-86822179 None:intergenic 30.0%
!! TAGCTAGCAGACTATTTTAA+AGG - chr3_3:86822190-86822209 Msa0481050:five_prime_UTR 30.0%
!!! ATTTTTGGAATTCAGAAGAG+TGG - chr3_3:86822234-86822253 Msa0481050:five_prime_UTR 30.0%
GTTGCAAAATACTGAAGACA+TGG - chr3_3:86813008-86813027 Msa0481050:three_prime_UTR 35.0%
CGAGAAGAACGAAAAGAAAA+AGG + chr3_3:86813087-86813106 None:intergenic 35.0%
!!! GTTTTTGGAGTAGAAAGGAA+TGG + chr3_3:86813121-86813140 None:intergenic 35.0%
!!! GGTTTGTTTTTGGAGTAGAA+AGG + chr3_3:86813126-86813145 None:intergenic 35.0%
!!! AAGCAACTGTGGTTTGTTTT+TGG + chr3_3:86813136-86813155 None:intergenic 35.0%
! AGAAGAAGAAGCTACTTTGA+GGG + chr3_3:86813178-86813197 None:intergenic 35.0%
! AAGAAGAAGAAGCTACTTTG+AGG + chr3_3:86813179-86813198 None:intergenic 35.0%
GAAGCTCAAAACAATTTGCA+AGG - chr3_3:86813204-86813223 Msa0481050:CDS 35.0%
AAACAATTTGCAAGGGAAAC+CGG - chr3_3:86813212-86813231 Msa0481050:CDS 35.0%
TTCTACTTCCTCTTGTTGAT+AGG + chr3_3:86813286-86813305 None:intergenic 35.0%
! GTACTGATGAACAAGATAAG+TGG - chr3_3:86813316-86813335 Msa0481050:intron 35.0%
!! AACAAGATAAGTGGGTTGAT+TGG - chr3_3:86813325-86813344 Msa0481050:intron 35.0%
!! ACAAGATAAGTGGGTTGATT+GGG - chr3_3:86813326-86813345 Msa0481050:intron 35.0%
! TGATTGGGAAGATCAGATTT+TGG - chr3_3:86813341-86813360 Msa0481050:intron 35.0%
AACAAAACCAACCAAAGGAA+CGG + chr3_3:86813373-86813392 None:intergenic 35.0%
GTTCTAACAAAACCAACCAA+AGG + chr3_3:86813378-86813397 None:intergenic 35.0%
GTTAGAACAATCCTTCATTC+TGG - chr3_3:86813390-86813409 Msa0481050:intron 35.0%
!! GCTGTTGATTTCATGTTGAA+TGG - chr3_3:86813557-86813576 Msa0481050:intron 35.0%
ATACACTCATATGTTAGAGC+TGG + chr3_3:86813844-86813863 None:intergenic 35.0%
TTTACTGCCCTCAAATTTAG+TGG + chr3_3:86813901-86813920 None:intergenic 35.0%
CATCTCTTAGAAATTGAGGT+TGG + chr3_3:86814312-86814331 None:intergenic 35.0%
! CTTGAACAAATCCGTTTTGT+GGG - chr3_3:86814347-86814366 Msa0481050:intron 35.0%
! TTGAACAAATCCGTTTTGTG+GGG - chr3_3:86814348-86814367 Msa0481050:intron 35.0%
CTTCTCTTAGAAATTGAGGT+TGG + chr3_3:86814385-86814404 None:intergenic 35.0%
AAAGGTTGTATGCAATACCT+GGG - chr3_3:86814508-86814527 Msa0481050:intron 35.0%
ATACATAAAACCATGGACGA+CGG + chr3_3:86814614-86814633 None:intergenic 35.0%
!!! CCAATCTTTTTCTGAGATTC+AGG + chr3_3:86814904-86814923 None:intergenic 35.0%
CCTGAATCTCAGAAAAAGAT+TGG - chr3_3:86814901-86814920 Msa0481050:intron 35.0%
TCTCAGAAAAAGATTGGATG+TGG - chr3_3:86814907-86814926 Msa0481050:intron 35.0%
AAGGGTAAAATCCTTTCAGT+AGG + chr3_3:86815096-86815115 None:intergenic 35.0%
ATAGGATTTGCCTTCAAAAG+TGG - chr3_3:86815167-86815186 Msa0481050:intron 35.0%
TAGGATTTGCCTTCAAAAGT+GGG - chr3_3:86815168-86815187 Msa0481050:intron 35.0%
CTTGCACTTTAACCAGTTAT+TGG + chr3_3:86815197-86815216 None:intergenic 35.0%
AAGTGCAAGTTGTTAGCTAT+TGG - chr3_3:86815208-86815227 Msa0481050:intron 35.0%
! TCGCATGAGTTTTCATAAAC+TGG + chr3_3:86815290-86815309 None:intergenic 35.0%
ACTGTGCAAACTACCAAATT+AGG + chr3_3:86815399-86815418 None:intergenic 35.0%
TATTTGTTCCTCTGTATGCA+CGG - chr3_3:86815585-86815604 Msa0481050:intron 35.0%
TTTGTGTATATCATCTCCAC+AGG - chr3_3:86815817-86815836 Msa0481050:intron 35.0%
TTGTGTATATCATCTCCACA+GGG - chr3_3:86815818-86815837 Msa0481050:intron 35.0%
TAGAAATAACGGTATCGCTT+TGG + chr3_3:86816085-86816104 None:intergenic 35.0%
TTTCAGATACTTAATCAGGC+TGG + chr3_3:86816183-86816202 None:intergenic 35.0%
CATCTACTCTTGTAGTATTG+AGG + chr3_3:86816433-86816452 None:intergenic 35.0%
AAACACAAAGCAAGTGGTTT+AGG + chr3_3:86816558-86816577 None:intergenic 35.0%
! GCTTTGTGTTTCTCTAGAAA+TGG - chr3_3:86816567-86816586 Msa0481050:intron 35.0%
AACTAGGTCACTTAAAAAGG+AGG + chr3_3:86816762-86816781 None:intergenic 35.0%
CATTCTTTCTTCCTTTCTCT+CGG - chr3_3:86816782-86816801 Msa0481050:intron 35.0%
ATTCTTTCTTCCTTTCTCTC+GGG - chr3_3:86816783-86816802 Msa0481050:intron 35.0%
TGTGACACTTTGTAGTGTAA+TGG + chr3_3:86816913-86816932 None:intergenic 35.0%
ACGGTTAGATGAAATAAGGA+AGG + chr3_3:86816936-86816955 None:intergenic 35.0%
GTCAACGGTTAGATGAAATA+AGG + chr3_3:86816940-86816959 None:intergenic 35.0%
TAGTGTATTAGTGTGGTCAA+CGG + chr3_3:86816955-86816974 None:intergenic 35.0%
!! ACACGTTATTTTCCTAGCAA+AGG - chr3_3:86817209-86817228 Msa0481050:intron 35.0%
!! AACATTTGCTATCTGCATAC+AGG + chr3_3:86817244-86817263 None:intergenic 35.0%
TGCAGATAGCAAATGTTAGA+TGG - chr3_3:86817247-86817266 Msa0481050:intron 35.0%
GAAATAATGCAACTATGGGA+AGG + chr3_3:86817364-86817383 None:intergenic 35.0%
TCCCATAGTTGCATTATTTC+TGG - chr3_3:86817364-86817383 Msa0481050:intron 35.0%
CCCAGAAATAATGCAACTAT+GGG + chr3_3:86817368-86817387 None:intergenic 35.0%
! CCCATAGTTGCATTATTTCT+GGG - chr3_3:86817365-86817384 Msa0481050:intron 35.0%
!! CCATAGTTGCATTATTTCTG+GGG - chr3_3:86817366-86817385 Msa0481050:intron 35.0%
!! ATTTTCTAGTGGAGCAACTA+TGG + chr3_3:86817400-86817419 None:intergenic 35.0%
TTTAACTAGGTCGGAACAAA+AGG + chr3_3:86817454-86817473 None:intergenic 35.0%
! TTTTGTTCCGACCTAGTTAA+AGG - chr3_3:86817453-86817472 Msa0481050:intron 35.0%
TACAACCATTAGATTAGCAC+TGG - chr3_3:86817580-86817599 Msa0481050:intron 35.0%
CTAAACACGCTAGAAAGATA+GGG + chr3_3:86817975-86817994 None:intergenic 35.0%
TCTAAACACGCTAGAAAGAT+AGG + chr3_3:86817976-86817995 None:intergenic 35.0%
AAAGTGATTCTGAACACAGT+AGG + chr3_3:86818023-86818042 None:intergenic 35.0%
TTTATATCCGAATTGTGGTC+TGG - chr3_3:86818204-86818223 Msa0481050:intron 35.0%
GCTTAACAGAAATTTGGTCT+CGG - chr3_3:86818238-86818257 Msa0481050:intron 35.0%
TTTCATAGTGAAGATTGGGA+AGG + chr3_3:86818287-86818306 None:intergenic 35.0%
! AACATAGTTTGGAGCAGAAT+AGG + chr3_3:86818729-86818748 None:intergenic 35.0%
TATTCTGCTCCAAACTATGT+TGG - chr3_3:86818728-86818747 Msa0481050:intron 35.0%
TACTCATCTCCAACATAGTT+TGG + chr3_3:86818740-86818759 None:intergenic 35.0%
CTATGTTGGAGATGAGTATT+AGG - chr3_3:86818742-86818761 Msa0481050:intron 35.0%
AGATTTGAAAAGGATCATCG+AGG + chr3_3:86818778-86818797 None:intergenic 35.0%
! CGATGATCCTTTTCAAATCT+AGG - chr3_3:86818778-86818797 Msa0481050:intron 35.0%
AGGTAGACCTAGATTTGAAA+AGG + chr3_3:86818788-86818807 None:intergenic 35.0%
!! GGTTGATTCTTTGTTTCTGA+GGG + chr3_3:86818886-86818905 None:intergenic 35.0%
!! TGGTTGATTCTTTGTTTCTG+AGG + chr3_3:86818887-86818906 None:intergenic 35.0%
GGTTGGCAATTCTAATAAGA+TGG + chr3_3:86818907-86818926 None:intergenic 35.0%
TCTTATTAGAATTGCCAACC+TGG - chr3_3:86818907-86818926 Msa0481050:intron 35.0%
ACAAACCAGTTTCTCTGATT+TGG - chr3_3:86818959-86818978 Msa0481050:intron 35.0%
AAATGCCAATTAAGTACCTG+TGG - chr3_3:86819096-86819115 Msa0481050:intron 35.0%
AATGCCAATTAAGTACCTGT+GGG - chr3_3:86819097-86819116 Msa0481050:intron 35.0%
! AGAAATTTGAGACTTTGCTG+AGG - chr3_3:86819146-86819165 Msa0481050:intron 35.0%
! GGGAGGTTATTCACATTTTA+TGG + chr3_3:86819179-86819198 None:intergenic 35.0%
TGCTGTATTGCCTTTACTAA+GGG - chr3_3:86819218-86819237 Msa0481050:intron 35.0%
! AGAGTTGATTCCCTTAGTAA+AGG + chr3_3:86819231-86819250 None:intergenic 35.0%
AAATTTAGCATAGCCAACAC+CGG - chr3_3:86819406-86819425 Msa0481050:intron 35.0%
!! AACATGCTTTTGAGTACACT+GGG + chr3_3:86819480-86819499 None:intergenic 35.0%
!! AAACATGCTTTTGAGTACAC+TGG + chr3_3:86819481-86819500 None:intergenic 35.0%
TCTTGACATGCTAATATCAG+CGG + chr3_3:86819555-86819574 None:intergenic 35.0%
AAGACCAATAATCCACCATA+AGG - chr3_3:86819571-86819590 Msa0481050:intron 35.0%
!! AAAGCCTTATGGTGGATTAT+TGG + chr3_3:86819578-86819597 None:intergenic 35.0%
AGATTGGAGTTCACTTTACA+TGG - chr3_3:86819621-86819640 Msa0481050:intron 35.0%
GATTGGAGTTCACTTTACAT+GGG - chr3_3:86819622-86819641 Msa0481050:intron 35.0%
AATCACATCATATACAAGGC+GGG + chr3_3:86819659-86819678 None:intergenic 35.0%
CAATCACATCATATACAAGG+CGG + chr3_3:86819660-86819679 None:intergenic 35.0%
! TCTACAATCTGTAAAAGTGC+TGG + chr3_3:86819718-86819737 None:intergenic 35.0%
TTCTTCAACATCTTGGTATG+TGG + chr3_3:86819799-86819818 None:intergenic 35.0%
ATTCACAGCACATTGAAATG+TGG - chr3_3:86819862-86819881 Msa0481050:intron 35.0%
TCAAATATGGATGCATGAGA+AGG + chr3_3:86819969-86819988 None:intergenic 35.0%
TCTCATGCATCCATATTTGA+TGG - chr3_3:86819969-86819988 Msa0481050:intron 35.0%
AACAGGTAAAACAAATCCAC+TGG - chr3_3:86820133-86820152 Msa0481050:intron 35.0%
TAATAATCCCTTGACCTTCA+TGG - chr3_3:86820205-86820224 Msa0481050:intron 35.0%
!! TTTTAGAAGGGATGCAATTC+TGG - chr3_3:86820311-86820330 Msa0481050:CDS 35.0%
TTTAGAAGGGATGCAATTCT+GGG - chr3_3:86820312-86820331 Msa0481050:CDS 35.0%
GTCATAAGTCATTCACACTT+TGG - chr3_3:86820349-86820368 Msa0481050:intron 35.0%
ATAAGTCATTCACACTTTGG+TGG - chr3_3:86820352-86820371 Msa0481050:intron 35.0%
TAAGTCATTCACACTTTGGT+GGG - chr3_3:86820353-86820372 Msa0481050:intron 35.0%
AATGACCGTATTTCAACCTA+AGG - chr3_3:86820666-86820685 Msa0481050:intron 35.0%
AGTGGGAAAACTATCCAAAT+AGG + chr3_3:86820805-86820824 None:intergenic 35.0%
ATACACTTTGCATGTTGCTA+AGG - chr3_3:86820856-86820875 Msa0481050:intron 35.0%
GAAAACCTATCTATAGCAGA+GGG + chr3_3:86820897-86820916 None:intergenic 35.0%
AGAAAACCTATCTATAGCAG+AGG + chr3_3:86820898-86820917 None:intergenic 35.0%
! TGCTATAGATAGGTTTTCTC+AGG - chr3_3:86820899-86820918 Msa0481050:intron 35.0%
ATGAATCAAACTGCTAGAGA+AGG + chr3_3:86820954-86820973 None:intergenic 35.0%
TCGAGCAAAGTAGTTGAATT+TGG + chr3_3:86820985-86821004 None:intergenic 35.0%
ACTATCATGGAATGAGAAGA+AGG + chr3_3:86821008-86821027 None:intergenic 35.0%
CTTCTCATTCCATGATAGTT+AGG - chr3_3:86821009-86821028 Msa0481050:intron 35.0%
TAGCCATTAGATGGAGATTA+AGG + chr3_3:86821161-86821180 None:intergenic 35.0%
CGAAATATGTAGCCATTAGA+TGG + chr3_3:86821170-86821189 None:intergenic 35.0%
! AAATGTCTGTGCTTTTACTG+GGG + chr3_3:86821281-86821300 None:intergenic 35.0%
! GAAATGTCTGTGCTTTTACT+GGG + chr3_3:86821282-86821301 None:intergenic 35.0%
! TGAAATGTCTGTGCTTTTAC+TGG + chr3_3:86821283-86821302 None:intergenic 35.0%
GCACAGACATTTCAAAATAG+TGG - chr3_3:86821289-86821308 Msa0481050:intron 35.0%
ATATAGAACACGGAACTACT+GGG + chr3_3:86821565-86821584 None:intergenic 35.0%
AATATAGAACACGGAACTAC+TGG + chr3_3:86821566-86821585 None:intergenic 35.0%
CAAATTAGAGTTAGAAAGCG+TGG + chr3_3:86821623-86821642 None:intergenic 35.0%
! TTCTAACTCTAATTTGCAGC+TGG - chr3_3:86821627-86821646 Msa0481050:intron 35.0%
GTAAGACACTTCCTTAAGTA+AGG + chr3_3:86821674-86821693 None:intergenic 35.0%
CGTTAAAATTCTACCTGTTC+TGG - chr3_3:86821794-86821813 Msa0481050:CDS 35.0%
!!! TACCTGTTCTGGTTTTTCTT+CGG - chr3_3:86821805-86821824 Msa0481050:CDS 35.0%
! TCGGGGTAATTATTTTCTTC+AGG - chr3_3:86821824-86821843 Msa0481050:CDS 35.0%
! CGGGGTAATTATTTTCTTCA+GGG - chr3_3:86821825-86821844 Msa0481050:CDS 35.0%
! AGCTGGTAGACTTTTCATAT+TGG - chr3_3:86821970-86821989 Msa0481050:CDS 35.0%
CTTTCTCAGTTATTGTTGCG+AGG + chr3_3:86812932-86812951 None:intergenic 40.0%
AAACGAGAATGAAGCAACTG+TGG + chr3_3:86813147-86813166 None:intergenic 40.0%
CCTTTACCTTGTGAAAGAAC+CGG + chr3_3:86813234-86813253 None:intergenic 40.0%
GTTCTTTCACAAGGTAAAGG+AGG - chr3_3:86813234-86813253 Msa0481050:CDS 40.0%
ACAAGGTAAAGGAGGAATTG+TGG - chr3_3:86813242-86813261 Msa0481050:CDS 40.0%
CAGCTATTCCTATCAACAAG+AGG - chr3_3:86813275-86813294 Msa0481050:intron 40.0%
TTTGGAAGATACCGTTCCTT+TGG - chr3_3:86813359-86813378 Msa0481050:intron 40.0%
GAACTTACTGTCCAGAATGA+AGG + chr3_3:86813404-86813423 None:intergenic 40.0%
ATTTCACGAAGGAAGCAACA+TGG + chr3_3:86813946-86813965 None:intergenic 40.0%
TGTATGCACTATGCGGTTAT+GGG + chr3_3:86814154-86814173 None:intergenic 40.0%
GGTCATCTCTCATCCAATTT+GGG + chr3_3:86814222-86814241 None:intergenic 40.0%
AGGTCATCTCTCATCCAATT+TGG + chr3_3:86814223-86814242 None:intergenic 40.0%
! GCTTGAACAAATCCGTTTTG+TGG - chr3_3:86814346-86814365 Msa0481050:intron 40.0%
! GCAAAAGAAACTGACTCATC+TGG + chr3_3:86814475-86814494 None:intergenic 40.0%
CAAAGGTTGTATGCAATACC+TGG - chr3_3:86814507-86814526 Msa0481050:intron 40.0%
TGGGCAATATAAAATGGCTG+CGG - chr3_3:86814527-86814546 Msa0481050:intron 40.0%
TAGTGCATGAAATCACAACG+AGG + chr3_3:86814810-86814829 None:intergenic 40.0%
!! TTCTGAGATTCAGGGTGAAA+TGG + chr3_3:86814895-86814914 None:intergenic 40.0%
GCAATCTATCGGATTAAGCA+CGG - chr3_3:86815058-86815077 Msa0481050:intron 40.0%
AGGATTTGCCTTCAAAAGTG+GGG - chr3_3:86815169-86815188 Msa0481050:intron 40.0%
! GCATTTTGTTAAGTGTGGAG+TGG + chr3_3:86815336-86815355 None:intergenic 40.0%
!! ATTGGTATCCTCTAGAGTGT+GGG + chr3_3:86815361-86815380 None:intergenic 40.0%
AGGGATAGGCTACATAGAAA+GGG + chr3_3:86815532-86815551 None:intergenic 40.0%
TAAATGGCAAGGAAACCTGA+GGG + chr3_3:86815551-86815570 None:intergenic 40.0%
TTAAATGGCAAGGAAACCTG+AGG + chr3_3:86815552-86815571 None:intergenic 40.0%
ACTATCATCCATCCCAATAG+CGG - chr3_3:86815648-86815667 Msa0481050:intron 40.0%
ACCTATCATCCCGAATTTGA+TGG + chr3_3:86815754-86815773 None:intergenic 40.0%
GAAATTGCAGTTGTTACGCT+TGG + chr3_3:86815993-86816012 None:intergenic 40.0%
ATACTTAATCAGGCTGGACA+CGG + chr3_3:86816177-86816196 None:intergenic 40.0%
GATTCAACTCAAGATCGCTT+TGG + chr3_3:86816531-86816550 None:intergenic 40.0%
CTAGAGAAACACAAAGCAAG+TGG + chr3_3:86816564-86816583 None:intergenic 40.0%
! GAGAGCAAAACCACGTTTTA+GGG + chr3_3:86816672-86816691 None:intergenic 40.0%
! AGAGAGCAAAACCACGTTTT+AGG + chr3_3:86816673-86816692 None:intergenic 40.0%
! ACCAATGTCCAATGGGTTTA+AGG - chr3_3:86816808-86816827 Msa0481050:intron 40.0%
GAGTAACTTTCAGAAGGAGT+CGG + chr3_3:86817144-86817163 None:intergenic 40.0%
TATCTACACGACCACTAAGA+TGG - chr3_3:86817297-86817316 Msa0481050:intron 40.0%
CCCCAGAAATAATGCAACTA+TGG + chr3_3:86817369-86817388 None:intergenic 40.0%
!! TTGCATTATTTCTGGGGAAG+AGG - chr3_3:86817372-86817391 Msa0481050:intron 40.0%
AGTTGCTCCACTAGAAAATG+TGG - chr3_3:86817401-86817420 Msa0481050:intron 40.0%
! CATCTTGCCACATTTTCTAG+TGG + chr3_3:86817411-86817430 None:intergenic 40.0%
GCACAATCCTTTAACTAGGT+CGG + chr3_3:86817463-86817482 None:intergenic 40.0%
ATAAGTGTGACTGAATCCTG+AGG - chr3_3:86817492-86817511 Msa0481050:intron 40.0%
TAAGTGTGACTGAATCCTGA+GGG - chr3_3:86817493-86817512 Msa0481050:intron 40.0%
TCTACGAGTTTCATCCAACT+TGG + chr3_3:86817528-86817547 None:intergenic 40.0%
GAAACAAGATGGCTCACAAA+GGG + chr3_3:86817834-86817853 None:intergenic 40.0%
AGAAACAAGATGGCTCACAA+AGG + chr3_3:86817835-86817854 None:intergenic 40.0%
GCAGCACAATAGAAACAAGA+TGG + chr3_3:86817845-86817864 None:intergenic 40.0%
TTCTGAACACAGTAGGAAGA+TGG + chr3_3:86818016-86818035 None:intergenic 40.0%
! TTTTTGTCTCAGGTGCAGTT+TGG - chr3_3:86818142-86818161 Msa0481050:intron 40.0%
GTCTGTAACAAGCTTAAGTG+TGG - chr3_3:86818343-86818362 Msa0481050:intron 40.0%
AAAGGATCATCGAGGATCTA+AGG + chr3_3:86818770-86818789 None:intergenic 40.0%
! TCATATAGTGGAGGAAGTCA+AGG + chr3_3:86818808-86818827 None:intergenic 40.0%
AAGGTTTAGGAATATCCTGC+AGG - chr3_3:86818844-86818863 Msa0481050:intron 40.0%
! GTTTCTGAGGGATGACAAAT+AGG + chr3_3:86818874-86818893 None:intergenic 40.0%
CTACACCAAATCAGAGAAAC+TGG + chr3_3:86818967-86818986 None:intergenic 40.0%
GAAACGGAAGAATGATCCTT+GGG + chr3_3:86819034-86819053 None:intergenic 40.0%
TGAAACGGAAGAATGATCCT+TGG + chr3_3:86819035-86819054 None:intergenic 40.0%
CATTCTTCCGTTTCACCATA+AGG - chr3_3:86819040-86819059 Msa0481050:intron 40.0%
CAGATCACCTTATGGTGAAA+CGG + chr3_3:86819050-86819069 None:intergenic 40.0%
GAGTGGCTTCAATTCAATGA+AGG - chr3_3:86819072-86819091 Msa0481050:intron 40.0%
TAGTAAAGGCAATACAGCAC+TGG + chr3_3:86819217-86819236 None:intergenic 40.0%
GTGCTGTATTGCCTTTACTA+AGG - chr3_3:86819217-86819236 Msa0481050:intron 40.0%
TTGGAGTTATTGCACAAGGT+AGG + chr3_3:86819331-86819350 None:intergenic 40.0%
GTCATTGGAGTTATTGCACA+AGG + chr3_3:86819335-86819354 None:intergenic 40.0%
! GGTAGCAGAAACGACATTTT+AGG + chr3_3:86819458-86819477 None:intergenic 40.0%
!! ACATGCTTTTGAGTACACTG+GGG + chr3_3:86819479-86819498 None:intergenic 40.0%
TTCTTCGACAATCATGTCAC+AGG - chr3_3:86819499-86819518 Msa0481050:intron 40.0%
! GAACAGTAAAAGCCTTATGG+TGG + chr3_3:86819586-86819605 None:intergenic 40.0%
ATCACATCATATACAAGGCG+GGG + chr3_3:86819658-86819677 None:intergenic 40.0%
TATGATGTGATTGAGAGTCC+CGG - chr3_3:86819667-86819686 Msa0481050:intron 40.0%
!! ATCTGTAAAAGTGCTGGTTC+AGG + chr3_3:86819712-86819731 None:intergenic 40.0%
AGCACAGATTTCCATAAGAG+AGG - chr3_3:86819826-86819845 Msa0481050:intron 40.0%
GCACAGATTTCCATAAGAGA+GGG - chr3_3:86819827-86819846 Msa0481050:intron 40.0%
TTGAAATGTGGCTGGTACAT+TGG - chr3_3:86819874-86819893 Msa0481050:intron 40.0%
GGTACATTGGTCAATCTGAA+CGG - chr3_3:86819887-86819906 Msa0481050:intron 40.0%
TGTAATGCCTATGTTGAGGT+CGG - chr3_3:86819924-86819943 Msa0481050:intron 40.0%
!! TTGAGGTCGGAATCTTGTTT+TGG - chr3_3:86819937-86819956 Msa0481050:intron 40.0%
!!! TGAGGTCGGAATCTTGTTTT+GGG - chr3_3:86819938-86819957 Msa0481050:intron 40.0%
GGGCAAGTTACCATCAAATA+TGG + chr3_3:86819982-86820001 None:intergenic 40.0%
ACGCAGTGGGTAAATTACAT+GGG + chr3_3:86820033-86820052 None:intergenic 40.0%
AACGCAGTGGGTAAATTACA+TGG + chr3_3:86820034-86820053 None:intergenic 40.0%
CTGTTATAGAAGAACGCAGT+GGG + chr3_3:86820046-86820065 None:intergenic 40.0%
CACTGCGTTCTTCTATAACA+GGG - chr3_3:86820045-86820064 Msa0481050:intron 40.0%
ACCATCATACTGAGTGCATT+GGG + chr3_3:86820101-86820120 None:intergenic 40.0%
! CAGTATGATGGTGTACTAAG+AGG - chr3_3:86820109-86820128 Msa0481050:intron 40.0%
ATGGTGTACTAAGAGGTAAC+AGG - chr3_3:86820116-86820135 Msa0481050:intron 40.0%
!!! CTGGTTTTGATAGAAAGCCA+AGG + chr3_3:86820176-86820195 None:intergenic 40.0%
! CTTGGCTTTCTATCAAAACC+AGG - chr3_3:86820174-86820193 Msa0481050:intron 40.0%
GTTCAACATGAGGAAAATCC+CGG + chr3_3:86820238-86820257 None:intergenic 40.0%
GATCTCACAGTCAATGAACA+CGG + chr3_3:86820586-86820605 None:intergenic 40.0%
CATTTCAAGACTCTTGTCTC+TGG - chr3_3:86820618-86820637 Msa0481050:intron 40.0%
!! GGGTTCCTTAGGTTGAAATA+CGG + chr3_3:86820674-86820693 None:intergenic 40.0%
!! TGGCTCAGATGTACTAGTTT+TGG - chr3_3:86820734-86820753 Msa0481050:intron 40.0%
!!! TGTACTAGTTTTGGACTCCT+CGG - chr3_3:86820743-86820762 Msa0481050:intron 40.0%
! TGGATAGTTTTCCCACTTCT+TGG - chr3_3:86820808-86820827 Msa0481050:intron 40.0%
! TAGTTTTCCCACTTCTTGGT+TGG - chr3_3:86820812-86820831 Msa0481050:intron 40.0%
GGATTATCCAACCAAGAAGT+GGG + chr3_3:86820822-86820841 None:intergenic 40.0%
AGGATTATCCAACCAAGAAG+TGG + chr3_3:86820823-86820842 None:intergenic 40.0%
ATGAACCCTCTGCTATAGAT+AGG - chr3_3:86820889-86820908 Msa0481050:intron 40.0%
TGCTAGAGAAGGCAAAATGA+AGG + chr3_3:86820943-86820962 None:intergenic 40.0%
TGTAGGGATACATTCTCCTT+GGG + chr3_3:86821106-86821125 None:intergenic 40.0%
ATGTAGGGATACATTCTCCT+TGG + chr3_3:86821107-86821126 None:intergenic 40.0%
AGAAGGACGAAAGAATATGC+TGG + chr3_3:86821202-86821221 None:intergenic 40.0%
!! GGGTTGATACTTGATAGTGT+AGG + chr3_3:86821259-86821278 None:intergenic 40.0%
! AATGTCTGTGCTTTTACTGG+GGG + chr3_3:86821280-86821299 None:intergenic 40.0%
GATACTAATGTGTCCGACAT+AGG + chr3_3:86821327-86821346 None:intergenic 40.0%
ATGTCGGACACATTAGTATC+AGG - chr3_3:86821327-86821346 Msa0481050:intron 40.0%
CCTTAAGTAAGGTAACACCA+TGG + chr3_3:86821663-86821682 None:intergenic 40.0%
!! CCATGGTGTTACCTTACTTA+AGG - chr3_3:86821660-86821679 Msa0481050:intron 40.0%
ACAGAGCAGAAGTGAACAAT+TGG + chr3_3:86821724-86821743 None:intergenic 40.0%
!!! ACCTGTTCTGGTTTTTCTTC+GGG - chr3_3:86821806-86821825 Msa0481050:CDS 40.0%
TAGAGCGATCAAAATTGGGA+TGG + chr3_3:86821920-86821939 None:intergenic 40.0%
!! ATCCCAATTTTGATCGCTCT+AGG - chr3_3:86821919-86821938 Msa0481050:CDS 40.0%
CACCTAGAGCGATCAAAATT+GGG + chr3_3:86821924-86821943 None:intergenic 40.0%
ACACCTAGAGCGATCAAAAT+TGG + chr3_3:86821925-86821944 None:intergenic 40.0%
ATGTTCATAGTGCGACAAGA+TGG - chr3_3:86821945-86821964 Msa0481050:CDS 40.0%
ATGCAGACAGTTTCATTCTC+AGG - chr3_3:86822033-86822052 Msa0481050:CDS 40.0%
TAATGTTGGCAAAGATCGCG+AGG - chr3_3:86812894-86812913 Msa0481050:three_prime_UTR 45.0%
AATGTTGGCAAAGATCGCGA+GGG - chr3_3:86812895-86812914 Msa0481050:three_prime_UTR 45.0%
TCTCAGTTATTGTTGCGAGG+TGG + chr3_3:86812929-86812948 None:intergenic 45.0%
CCGGTTCTTTCACAAGGTAA+AGG - chr3_3:86813231-86813250 Msa0481050:CDS 45.0%
AGGTAAAGGAGGAATTGTGG+AGG - chr3_3:86813245-86813264 Msa0481050:CDS 45.0%
GAAGATACCGTTCCTTTGGT+TGG - chr3_3:86813363-86813382 Msa0481050:intron 45.0%
! GTGATTGGCGTCATGTTTTG+AGG + chr3_3:86813870-86813889 None:intergenic 45.0%
GTATGCACTATGCGGTTATG+GGG + chr3_3:86814153-86814172 None:intergenic 45.0%
CTGTATGCACTATGCGGTTA+TGG + chr3_3:86814155-86814174 None:intergenic 45.0%
TAACCGCATAGTGCATACAG+AGG - chr3_3:86814155-86814174 Msa0481050:intron 45.0%
AACCGCATAGTGCATACAGA+GGG - chr3_3:86814156-86814175 Msa0481050:intron 45.0%
AACCCTCTGTATGCACTATG+CGG + chr3_3:86814161-86814180 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+CGG + chr3_3:86814287-86814306 None:intergenic 45.0%
TCCAACACAACCCCACAAAA+CGG + chr3_3:86814361-86814380 None:intergenic 45.0%
TGCTTGAAATGGCCTCTTCT+TGG - chr3_3:86814418-86814437 Msa0481050:intron 45.0%
CAGTCATGTTCACCAAGAAG+AGG + chr3_3:86814433-86814452 None:intergenic 45.0%
!! GCAGCCATTTTATATTGCCC+AGG + chr3_3:86814528-86814547 None:intergenic 45.0%
AAAATGGCTGCGGCAATATC+AGG - chr3_3:86814537-86814556 Msa0481050:intron 45.0%
CGGCAATATCAGGACTGTAT+TGG - chr3_3:86814547-86814566 Msa0481050:intron 45.0%
TGCAGTGAAGATGGGAAAGA+AGG - chr3_3:86814645-86814664 Msa0481050:intron 45.0%
GCAGTGAAGATGGGAAAGAA+GGG - chr3_3:86814646-86814665 Msa0481050:intron 45.0%
! CAATGGTTTTCTCGTGCTCT+GGG + chr3_3:86814858-86814877 None:intergenic 45.0%
! ACAATGGTTTTCTCGTGCTC+TGG + chr3_3:86814859-86814878 None:intergenic 45.0%
TGGAAGGAGCTTCTCAACAA+TGG + chr3_3:86814875-86814894 None:intergenic 45.0%
GAGATTCAGGGTGAAATGGA+AGG + chr3_3:86814891-86814910 None:intergenic 45.0%
ATCAGCTGTTGCCTACTGAA+AGG - chr3_3:86815082-86815101 Msa0481050:intron 45.0%
!! TATTGGGACCCCACTTTTGA+AGG + chr3_3:86815180-86815199 None:intergenic 45.0%
AAAAGTGGGGTCCCAATAAC+TGG - chr3_3:86815182-86815201 Msa0481050:intron 45.0%
CAAGTTGTTAGCTATTGGCG+AGG - chr3_3:86815213-86815232 Msa0481050:intron 45.0%
! GGGGTGCATTTTGTTAAGTG+TGG + chr3_3:86815341-86815360 None:intergenic 45.0%
!! TTGGTATCCTCTAGAGTGTG+GGG + chr3_3:86815360-86815379 None:intergenic 45.0%
!! GATTGGTATCCTCTAGAGTG+TGG + chr3_3:86815362-86815381 None:intergenic 45.0%
GGATAGGCTACATAGAAAGG+GGG + chr3_3:86815530-86815549 None:intergenic 45.0%
GGGATAGGCTACATAGAAAG+GGG + chr3_3:86815531-86815550 None:intergenic 45.0%
GAGGGATAGGCTACATAGAA+AGG + chr3_3:86815533-86815552 None:intergenic 45.0%
TTCTATGTAGCCTATCCCTC+AGG - chr3_3:86815533-86815552 Msa0481050:intron 45.0%
CTATCATCCATCCCAATAGC+GGG - chr3_3:86815649-86815668 Msa0481050:intron 45.0%
CTTCTGAGTAGCCCAAAGTT+CGG + chr3_3:86815682-86815701 None:intergenic 45.0%
CTCAGTCTGGCCATCAAATT+CGG - chr3_3:86815741-86815760 Msa0481050:intron 45.0%
TCAGTCTGGCCATCAAATTC+GGG - chr3_3:86815742-86815761 Msa0481050:intron 45.0%
GCCATCAAATTCGGGATGAT+AGG - chr3_3:86815750-86815769 Msa0481050:intron 45.0%
AGAGATAGGACCATTTCGCT+TGG - chr3_3:86815951-86815970 Msa0481050:intron 45.0%
GAGATAGGACCATTTCGCTT+GGG - chr3_3:86815952-86815971 Msa0481050:intron 45.0%
! GTTTTGCATCCATGGAACAG+AGG + chr3_3:86816628-86816647 None:intergenic 45.0%
! AGCTTCACGTTTTGCATCCA+TGG + chr3_3:86816636-86816655 None:intergenic 45.0%
CAAAACGTGAAGCTCTTGTG+CGG - chr3_3:86816642-86816661 Msa0481050:intron 45.0%
! TCCTTCTCCTTTTGTGTGTG+CGG - chr3_3:86816716-86816735 Msa0481050:intron 45.0%
GCCTTAAACCCATTGGACAT+TGG + chr3_3:86816812-86816831 None:intergenic 45.0%
CAAATGGGCCTTAAACCCAT+TGG + chr3_3:86816819-86816838 None:intergenic 45.0%
!! TCAGAAGGAGTCGGTTTGTT+GGG + chr3_3:86817135-86817154 None:intergenic 45.0%
!! TTCAGAAGGAGTCGGTTTGT+TGG + chr3_3:86817136-86817155 None:intergenic 45.0%
AGGTCACAAAGACCTTTGCT+AGG + chr3_3:86817224-86817243 None:intergenic 45.0%
TGAAACTCGTAGAGTAGCCA+TGG - chr3_3:86817535-86817554 Msa0481050:intron 45.0%
GGCTACCAGTGCTAATCTAA+TGG + chr3_3:86817588-86817607 None:intergenic 45.0%
ACACAGTAGGAAGATGGCAT+GGG + chr3_3:86818010-86818029 None:intergenic 45.0%
AACACAGTAGGAAGATGGCA+TGG + chr3_3:86818011-86818030 None:intergenic 45.0%
CTGAGAGATCTCAAACACAG+TGG + chr3_3:86818098-86818117 None:intergenic 45.0%
! TGTGGTAAGCTTTAGCTCGA+GGG - chr3_3:86818361-86818380 Msa0481050:intron 45.0%
TATGACATTGCGTACCAGGT+TGG + chr3_3:86818924-86818943 None:intergenic 45.0%
TGAGTATGACATTGCGTACC+AGG + chr3_3:86818928-86818947 None:intergenic 45.0%
CCACTCTACAGATCACCTTA+TGG + chr3_3:86819058-86819077 None:intergenic 45.0%
CCATAAGGTGATCTGTAGAG+TGG - chr3_3:86819055-86819074 Msa0481050:intron 45.0%
ACAGCCCACAGGTACTTAAT+TGG + chr3_3:86819104-86819123 None:intergenic 45.0%
! AATTAAGTACCTGTGGGCTG+TGG - chr3_3:86819103-86819122 Msa0481050:intron 45.0%
ACTGGCAGTCATACTTGCTT+GGG + chr3_3:86819199-86819218 None:intergenic 45.0%
TCATGCATGATGCACCTACT+TGG - chr3_3:86819254-86819273 Msa0481050:intron 45.0%
ATGATGCACCTACTTGGAGA+CGG - chr3_3:86819260-86819279 Msa0481050:intron 45.0%
ACAAGCTGTCACTACATTGC+CGG + chr3_3:86819428-86819447 None:intergenic 45.0%
CTTAACTAGCCAGCTCAGAT+TGG - chr3_3:86819605-86819624 Msa0481050:intron 45.0%
AAGTGAACTCCAATCTGAGC+TGG + chr3_3:86819617-86819636 None:intergenic 45.0%
TATACAAGGCGGGGTTACTA+TGG + chr3_3:86819649-86819668 None:intergenic 45.0%
ATGATGTGATTGAGAGTCCC+GGG - chr3_3:86819668-86819687 Msa0481050:intron 45.0%
TTTCCATAAGAGAGGGATGC+AGG - chr3_3:86819834-86819853 Msa0481050:intron 45.0%
ACAGCACATTGAAATGTGGC+TGG - chr3_3:86819866-86819885 Msa0481050:intron 45.0%
CAAGATTCCGACCTCAACAT+AGG + chr3_3:86819934-86819953 None:intergenic 45.0%
CCTGTTATAGAAGAACGCAG+TGG + chr3_3:86820047-86820066 None:intergenic 45.0%
CCACTGCGTTCTTCTATAAC+AGG - chr3_3:86820044-86820063 Msa0481050:intron 45.0%
ACAGGGATTGCATACTTACC+TGG - chr3_3:86820062-86820081 Msa0481050:intron 45.0%
CCATCATACTGAGTGCATTG+GGG + chr3_3:86820100-86820119 None:intergenic 45.0%
CACCATCATACTGAGTGCAT+TGG + chr3_3:86820102-86820121 None:intergenic 45.0%
ATCCCTTGACCTTCATGGTT+TGG - chr3_3:86820210-86820229 Msa0481050:intron 45.0%
TCCCTTGACCTTCATGGTTT+GGG - chr3_3:86820211-86820230 Msa0481050:intron 45.0%
! GCTACGGCACTCCAATTTTT+GGG + chr3_3:86820471-86820490 None:intergenic 45.0%
TGAACTCCTCCCTTTGACAA+TGG - chr3_3:86820525-86820544 Msa0481050:intron 45.0%
TGGACGACTCCATTGTCAAA+GGG + chr3_3:86820537-86820556 None:intergenic 45.0%
ATGGACGACTCCATTGTCAA+AGG + chr3_3:86820538-86820557 None:intergenic 45.0%
ACTCTTGTCTCTGGCTGAAA+AGG - chr3_3:86820627-86820646 Msa0481050:intron 45.0%
TACGGTCATTGCTTATGTCG+TGG + chr3_3:86820656-86820675 None:intergenic 45.0%
TCAACCTAAGGAACCCATGA+CGG - chr3_3:86820678-86820697 Msa0481050:intron 45.0%
TATCACATCACGGTTTCCCA+AGG - chr3_3:86821087-86821106 Msa0481050:intron 45.0%
! GCAGGCGAAAAAAGTGTAGA+AGG + chr3_3:86821219-86821238 None:intergenic 45.0%
! ATGTCTGTGCTTTTACTGGG+GGG + chr3_3:86821279-86821298 None:intergenic 45.0%
TGTCCGACATAGGTATGACA+CGG + chr3_3:86821317-86821336 None:intergenic 45.0%
CGTGGATACAACGTGAGATA+CGG + chr3_3:86821605-86821624 None:intergenic 45.0%
!!! CCTGTTCTGGTTTTTCTTCG+GGG - chr3_3:86821807-86821826 Msa0481050:CDS 45.0%
! TCTCTTTTCCTGCTGCAGAT+TGG - chr3_3:86821891-86821910 Msa0481050:CDS 45.0%
GTTTCATTCTCAGGCACTTC+AGG - chr3_3:86822042-86822061 Msa0481050:CDS 45.0%
TAACAACTCACTAATCGCCG+CGG - chr3_3:86822265-86822284 Msa0481050:five_prime_UTR 45.0%
!!! ATAAATAATATAGAAATTTT+TGG - chr3_3:86822219-86822238 Msa0481050:five_prime_UTR 5.0%
! GGGAAACCGGTTCTTTCACA+AGG - chr3_3:86813225-86813244 Msa0481050:CDS 50.0%
!!! ACCTCACATGCCGGTTTTGT+GGG - chr3_3:86814274-86814293 Msa0481050:intron 50.0%
! TCCGTTTTGTGGGGTTGTGT+TGG - chr3_3:86814357-86814376 Msa0481050:intron 50.0%
AAATGCACCCCACACTCTAG+AGG - chr3_3:86815350-86815369 Msa0481050:intron 50.0%
! TCCATCCCAATAGCGGGAAT+CGG - chr3_3:86815655-86815674 Msa0481050:intron 50.0%
GTCTCTGATCCCAAGCGAAA+TGG + chr3_3:86815964-86815983 None:intergenic 50.0%
GGACACGAAGGATCTTGACA+TGG + chr3_3:86816510-86816529 None:intergenic 50.0%
! CAAGATCGCTTTGGACACGA+AGG + chr3_3:86816522-86816541 None:intergenic 50.0%
! GGCGGCAGCAACATCATTTT+GGG + chr3_3:86816607-86816626 None:intergenic 50.0%
! AGGCGGCAGCAACATCATTT+TGG + chr3_3:86816608-86816627 None:intergenic 50.0%
TTGCATCCATGGAACAGAGG+CGG + chr3_3:86816625-86816644 None:intergenic 50.0%
! ACATTGGTGACCCGAGAGAA+AGG + chr3_3:86816796-86816815 None:intergenic 50.0%
TCGGGTCACCAATGTCCAAT+GGG - chr3_3:86816801-86816820 Msa0481050:intron 50.0%
AAACACACGTGCAGCAAGCT+TGG + chr3_3:86816858-86816877 None:intergenic 50.0%
!! TCGGTTTGTTGGGTTGCAAG+AGG + chr3_3:86817125-86817144 None:intergenic 50.0%
GGGTTAGGACACCATCTTAG+TGG + chr3_3:86817311-86817330 None:intergenic 50.0%
AACAGGCTGTAGCGTACGAA+GGG + chr3_3:86817331-86817350 None:intergenic 50.0%
GTTTCATCCAACTTGGACCG+AGG + chr3_3:86817521-86817540 None:intergenic 50.0%
GTAGTTCGCCATATCCCAGT+GGG + chr3_3:86817563-86817582 None:intergenic 50.0%
TGTAGTTCGCCATATCCCAG+TGG + chr3_3:86817564-86817583 None:intergenic 50.0%
ACAAGATGGCTCACAAAGGG+TGG + chr3_3:86817831-86817850 None:intergenic 50.0%
! GTGTGGTAAGCTTTAGCTCG+AGG - chr3_3:86818360-86818379 Msa0481050:intron 50.0%
TGACAAATAGGTCGACCTGC+AGG + chr3_3:86818862-86818881 None:intergenic 50.0%
AGAGAGATGGGAACAGACAG+AGG + chr3_3:86818994-86819013 None:intergenic 50.0%
CTGTTCCCATCTCTCTCATG+AGG - chr3_3:86818998-86819017 Msa0481050:intron 50.0%
TCCCATCTCTCTCATGAGGA+TGG - chr3_3:86819002-86819021 Msa0481050:intron 50.0%
CCCATCCTCATGAGAGAGAT+GGG + chr3_3:86819006-86819025 None:intergenic 50.0%
CCCATCTCTCTCATGAGGAT+GGG - chr3_3:86819003-86819022 Msa0481050:intron 50.0%
TCCCATCCTCATGAGAGAGA+TGG + chr3_3:86819007-86819026 None:intergenic 50.0%
CACTGGCAGTCATACTTGCT+TGG + chr3_3:86819200-86819219 None:intergenic 50.0%
! CGATGCATGGGTTGAGGTTT+AGG + chr3_3:86819362-86819381 None:intergenic 50.0%
TGTCACTACATTGCCGGTGT+TGG + chr3_3:86819422-86819441 None:intergenic 50.0%
!! AAAAGTGCTGGTTCAGGACG+AGG + chr3_3:86819706-86819725 None:intergenic 50.0%
TGTCCTGCATCCCTCTCTTA+TGG + chr3_3:86819840-86819859 None:intergenic 50.0%
TTGGGGTAGGTGACAATTCC+AGG + chr3_3:86820083-86820102 None:intergenic 50.0%
CATACTGAGTGCATTGGGGT+AGG + chr3_3:86820096-86820115 None:intergenic 50.0%
CCCCAATGCACTCAGTATGA+TGG - chr3_3:86820097-86820116 Msa0481050:intron 50.0%
CCCCAAACCATGAAGGTCAA+GGG + chr3_3:86820215-86820234 None:intergenic 50.0%
CCCTTGACCTTCATGGTTTG+GGG - chr3_3:86820212-86820231 Msa0481050:intron 50.0%
CAAATGGCACTCTCTGTGCA+GGG - chr3_3:86820274-86820293 Msa0481050:CDS 50.0%
CACAGATTGCTTCAGTGGCA+AGG + chr3_3:86820406-86820425 None:intergenic 50.0%
AGCTGCACAGATTGCTTCAG+TGG + chr3_3:86820411-86820430 None:intergenic 50.0%
! GGCTACGGCACTCCAATTTT+TGG + chr3_3:86820472-86820491 None:intergenic 50.0%
GAGGAGTTCACACAGAGACA+GGG + chr3_3:86820515-86820534 None:intergenic 50.0%
ACGACTCCATTGTCAAAGGG+AGG + chr3_3:86820534-86820553 None:intergenic 50.0%
GGAGAGCGATTTCACGTGTA+TGG + chr3_3:86820557-86820576 None:intergenic 50.0%
AGTCAATGAACACGGAGGTG+AGG + chr3_3:86820578-86820597 None:intergenic 50.0%
CTCACAGTCAATGAACACGG+AGG + chr3_3:86820583-86820602 None:intergenic 50.0%
GGTCATTGCTTATGTCGTGG+AGG + chr3_3:86820653-86820672 None:intergenic 50.0%
CAACCTAAGGAACCCATGAC+GGG - chr3_3:86820679-86820698 Msa0481050:intron 50.0%
AACCTAAGGAACCCATGACG+GGG - chr3_3:86820680-86820699 Msa0481050:intron 50.0%
!!! AGTTTTGGACTCCTCGGACA+AGG - chr3_3:86820749-86820768 Msa0481050:intron 50.0%
! TGATAGTGTAGGCCCAACTG+AGG + chr3_3:86821248-86821267 None:intergenic 50.0%
GTGCCGTGTCATACCTATGT+CGG - chr3_3:86821311-86821330 Msa0481050:intron 50.0%
CAGCTGGTCAAATCAGTCCA+TGG - chr3_3:86821643-86821662 Msa0481050:intron 50.0%
CCCCGAAGAAAAACCAGAAC+AGG + chr3_3:86821810-86821829 None:intergenic 50.0%
TTCTCAGGCACTTCAGGAAG+CGG - chr3_3:86822048-86822067 Msa0481050:CDS 50.0%
GCAATCCTCACCTCACATGC+CGG - chr3_3:86814265-86814284 Msa0481050:intron 55.0%
CAAAACCGGCATGTGAGGTG+AGG + chr3_3:86814273-86814292 None:intergenic 55.0%
!!! CACCTCACATGCCGGTTTTG+TGG - chr3_3:86814273-86814292 Msa0481050:intron 55.0%
!!! CCTCACATGCCGGTTTTGTG+GGG - chr3_3:86814275-86814294 Msa0481050:intron 55.0%
TGGTCCAAACCCCACTGCAA+TGG - chr3_3:86814567-86814586 Msa0481050:intron 55.0%
GGTCCAAACCCCACTGCAAT+GGG - chr3_3:86814568-86814587 Msa0481050:intron 55.0%
!! CAATGGGCACTGGGCAAGTA+AGG - chr3_3:86814584-86814603 Msa0481050:intron 55.0%
GTAAGGCAATCCGTCGTCCA+TGG - chr3_3:86814601-86814620 Msa0481050:intron 55.0%
GGCAAGGAAACCTGAGGGAT+AGG + chr3_3:86815546-86815565 None:intergenic 55.0%
!! GAGAGTGTCCGTGCATACAG+AGG + chr3_3:86815596-86815615 None:intergenic 55.0%
! CCATCCCAATAGCGGGAATC+GGG - chr3_3:86815656-86815675 Msa0481050:intron 55.0%
AGAAGTGAAACAGTGCCCGC+AGG - chr3_3:86815697-86815716 Msa0481050:intron 55.0%
GAATATCGCGCTAGTCCCTG+TGG + chr3_3:86815836-86815855 None:intergenic 55.0%
! CGGTATCGCTTTGGACACGA+AGG + chr3_3:86816076-86816095 None:intergenic 55.0%
GCCGCACACACAAAAGGAGA+AGG + chr3_3:86816720-86816739 None:intergenic 55.0%
TAAGGGGCCGCACACACAAA+AGG + chr3_3:86816726-86816745 None:intergenic 55.0%
CTCGGGTCACCAATGTCCAA+TGG - chr3_3:86816800-86816819 Msa0481050:intron 55.0%
GCTGTAGCGTACGAAGGGTT+AGG + chr3_3:86817326-86817345 None:intergenic 55.0%
CAACAGGCTGTAGCGTACGA+AGG + chr3_3:86817332-86817351 None:intergenic 55.0%
CTTCGTACGCTACAGCCTGT+TGG - chr3_3:86817330-86817349 Msa0481050:intron 55.0%
GGGAAGGATTTCACGCCAAC+AGG + chr3_3:86817348-86817367 None:intergenic 55.0%
ACTGAATCCTGAGGGCTCCT+CGG - chr3_3:86817501-86817520 Msa0481050:intron 55.0%
AGAGTAGCCATGGTACCCAC+TGG - chr3_3:86817545-86817564 Msa0481050:intron 55.0%
GAGTAGCCATGGTACCCACT+GGG - chr3_3:86817546-86817565 Msa0481050:intron 55.0%
CCATATCCCAGTGGGTACCA+TGG + chr3_3:86817555-86817574 None:intergenic 55.0%
CCATGGTACCCACTGGGATA+TGG - chr3_3:86817552-86817571 Msa0481050:intron 55.0%
GTTGGGGCCAGACCACAATT+CGG + chr3_3:86818214-86818233 None:intergenic 55.0%
ATGAGGATGGGACTCTCCCA+AGG - chr3_3:86819015-86819034 Msa0481050:intron 55.0%
GGCAGTCATACTTGCTTGGG+AGG + chr3_3:86819196-86819215 None:intergenic 55.0%
ATGCACCTACTTGGAGACGG+AGG - chr3_3:86819263-86819282 Msa0481050:intron 55.0%
ACCTACTTGGAGACGGAGGA+TGG - chr3_3:86819267-86819286 Msa0481050:intron 55.0%
TCCATCCTCCGTCTCCAAGT+AGG + chr3_3:86819271-86819290 None:intergenic 55.0%
TACTTGGAGACGGAGGATGG+AGG - chr3_3:86819270-86819289 Msa0481050:intron 55.0%
TGAGGTTTAGGCGCGGTCAT+TGG + chr3_3:86819350-86819369 None:intergenic 55.0%
! CATGGGTTGAGGTTTAGGCG+CGG + chr3_3:86819357-86819376 None:intergenic 55.0%
AACCCATGCATCGCACTCGA+TGG - chr3_3:86819369-86819388 Msa0481050:intron 55.0%
CTCCATCGAGTGCGATGCAT+GGG + chr3_3:86819374-86819393 None:intergenic 55.0%
TCTCCATCGAGTGCGATGCA+TGG + chr3_3:86819375-86819394 None:intergenic 55.0%
GCATCGCACTCGATGGAGAA+TGG - chr3_3:86819376-86819395 Msa0481050:intron 55.0%
GCCCCAAACCATGAAGGTCA+AGG + chr3_3:86820216-86820235 None:intergenic 55.0%
! TGACCTTCATGGTTTGGGGC+CGG - chr3_3:86820216-86820235 Msa0481050:intron 55.0%
!! CCTGCACAGAGAGTGCCATT+TGG + chr3_3:86820276-86820295 None:intergenic 55.0%
CCAAATGGCACTCTCTGTGC+AGG - chr3_3:86820273-86820292 Msa0481050:CDS 55.0%
AGTGGCAAGGTCGCAGTATG+AGG + chr3_3:86820393-86820412 None:intergenic 55.0%
AGTTCACACAGAGACAGGGC+CGG + chr3_3:86820511-86820530 None:intergenic 55.0%
GGAGGAGTTCACACAGAGAC+AGG + chr3_3:86820516-86820535 None:intergenic 55.0%
TTCCCCGTCATGGGTTCCTT+AGG + chr3_3:86820685-86820704 None:intergenic 55.0%
! ACCCATGACGGGGAACTTTC+AGG - chr3_3:86820690-86820709 Msa0481050:intron 55.0%
GCCTGAAAGTTCCCCGTCAT+GGG + chr3_3:86820694-86820713 None:intergenic 55.0%
AGCCACCAGAAGCTCGTAAC+GGG + chr3_3:86820719-86820738 None:intergenic 55.0%
GAGCCACCAGAAGCTCGTAA+CGG + chr3_3:86820720-86820739 None:intergenic 55.0%
TTTGGACTCCTCGGACAAGG+TGG - chr3_3:86820752-86820771 Msa0481050:intron 55.0%
GCCTGCTCGTAACCTCAGTT+GGG - chr3_3:86821233-86821252 Msa0481050:intron 55.0%
GATGGTAGCCAATCTGCAGC+AGG + chr3_3:86821902-86821921 None:intergenic 55.0%
AGTGCGACAAGATGGAGAGC+TGG - chr3_3:86821953-86821972 Msa0481050:CDS 55.0%
GGAGTAATTCGCAGCATCCG+CGG + chr3_3:86822285-86822304 None:intergenic 55.0%
CCCCACAAAACCGGCATGTG+AGG + chr3_3:86814278-86814297 None:intergenic 60.0%
GTGCCCATTGCAGTGGGGTT+TGG + chr3_3:86814574-86814593 None:intergenic 60.0%
AACCCCACTGCAATGGGCAC+TGG - chr3_3:86814574-86814593 Msa0481050:intron 60.0%
ACCCCACTGCAATGGGCACT+GGG - chr3_3:86814575-86814594 Msa0481050:intron 60.0%
TGCCCAGTGCCCATTGCAGT+GGG + chr3_3:86814580-86814599 None:intergenic 60.0%
TTGCCCAGTGCCCATTGCAG+TGG + chr3_3:86814581-86814600 None:intergenic 60.0%
CCCGATTCCCGCTATTGGGA+TGG + chr3_3:86815659-86815678 None:intergenic 60.0%
TCGGCCCGATTCCCGCTATT+GGG + chr3_3:86815663-86815682 None:intergenic 60.0%
TTCGGCCCGATTCCCGCTAT+TGG + chr3_3:86815664-86815683 None:intergenic 60.0%
CGGGAATCGGGCCGAACTTT+GGG - chr3_3:86815668-86815687 Msa0481050:intron 60.0%
TTGCTGCCGCCTCTGTTCCA+TGG - chr3_3:86816616-86816635 Msa0481050:intron 60.0%
GTGCGGCTCTCCCTAAAACG+TGG - chr3_3:86816659-86816678 Msa0481050:intron 60.0%
GGGCTGTGGCAGTCCTTCAA+AGG - chr3_3:86819117-86819136 Msa0481050:intron 60.0%
GGAGACGGAGGATGGAGGTA+AGG - chr3_3:86819275-86819294 Msa0481050:intron 60.0%
! CGAGTGCGATGCATGGGTTG+AGG + chr3_3:86819368-86819387 None:intergenic 60.0%
ACGAGGCAGAGTGACTGTCC+CGG + chr3_3:86819689-86819708 None:intergenic 60.0%
! GACCTTCATGGTTTGGGGCC+GGG - chr3_3:86820217-86820236 Msa0481050:intron 60.0%
ATCCCGGCCCCAAACCATGA+AGG + chr3_3:86820222-86820241 None:intergenic 60.0%
CCATAGTCGAGGCTGGGCTA+CGG + chr3_3:86820487-86820506 None:intergenic 60.0%
CGTAGCCCAGCCTCGACTAT+GGG - chr3_3:86820485-86820504 Msa0481050:intron 60.0%
GGCCTGAAAGTTCCCCGTCA+TGG + chr3_3:86820695-86820714 None:intergenic 60.0%
! CACCAGAAGCTCGTAACGGG+GGG + chr3_3:86820716-86820735 None:intergenic 60.0%
CCACCAGAAGCTCGTAACGG+GGG + chr3_3:86820717-86820736 None:intergenic 60.0%
GCCACCAGAAGCTCGTAACG+GGG + chr3_3:86820718-86820737 None:intergenic 60.0%
CAAGGGATCCACCTTGTCCG+AGG + chr3_3:86820763-86820782 None:intergenic 60.0%
CGCCTGCTCGTAACCTCAGT+TGG - chr3_3:86821232-86821251 Msa0481050:intron 60.0%
GCCCAACTGAGGTTACGAGC+AGG + chr3_3:86821237-86821256 None:intergenic 60.0%
GCCCAGTGCCCATTGCAGTG+GGG + chr3_3:86814579-86814598 None:intergenic 65.0%
GCGGGAATCGGGCCGAACTT+TGG - chr3_3:86815667-86815686 Msa0481050:intron 65.0%
ACTTGGACCGAGGAGCCCTC+AGG + chr3_3:86817511-86817530 None:intergenic 65.0%
GAGGGCTCCTCGGTCCAAGT+TGG - chr3_3:86817511-86817530 Msa0481050:intron 65.0%
GAAGGACTGCCACAGCCCAC+AGG + chr3_3:86819115-86819134 None:intergenic 65.0%
CGAGGCAGAGTGACTGTCCC+GGG + chr3_3:86819688-86819707 None:intergenic 65.0%
CCGTAGCCCAGCCTCGACTA+TGG - chr3_3:86820484-86820503 Msa0481050:intron 65.0%
CCCCCGTTACGAGCTTCTGG+TGG - chr3_3:86820714-86820733 Msa0481050:intron 65.0%
GCCCAGCCTCGACTATGGGC+CGG - chr3_3:86820489-86820508 Msa0481050:intron 70.0%
GCCGGCCCATAGTCGAGGCT+GGG + chr3_3:86820493-86820512 None:intergenic 70.0%
ACAGGGCCGGCCCATAGTCG+AGG + chr3_3:86820498-86820517 None:intergenic 70.0%
GGCCCCCCGTTACGAGCTTC+TGG - chr3_3:86820711-86820730 Msa0481050:intron 70.0%
GGCCGGCCCATAGTCGAGGC+TGG + chr3_3:86820494-86820513 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 86812876 86822318 86812876 ID=Msa0481050;Name=Msa0481050
chr3_3 mRNA 86812876 86822318 86812876 ID=Msa0481050-mRNA-1;Parent=Msa0481050;Name=Msa0481050-mRNA-1;_AED=0.02;_eAED=0.02;_QI=151|0.66|0.75|1|0|0.75|4|233|241
chr3_3 exon 86812876 86813285 86812876 ID=Msa0481050-mRNA-1:exon:25105;Parent=Msa0481050-mRNA-1
chr3_3 exon 86815084 86815128 86815084 ID=Msa0481050-mRNA-1:exon:25104;Parent=Msa0481050-mRNA-1
chr3_3 exon 86820249 86820363 86820249 ID=Msa0481050-mRNA-1:exon:25103;Parent=Msa0481050-mRNA-1
chr3_3 exon 86821779 86822318 86821779 ID=Msa0481050-mRNA-1:exon:25102;Parent=Msa0481050-mRNA-1
chr3_3 five_prime_UTR 86822168 86822318 86822168 ID=Msa0481050-mRNA-1:five_prime_utr;Parent=Msa0481050-mRNA-1
chr3_3 CDS 86821779 86822167 86821779 ID=Msa0481050-mRNA-1:cds;Parent=Msa0481050-mRNA-1
chr3_3 CDS 86820249 86820363 86820249 ID=Msa0481050-mRNA-1:cds;Parent=Msa0481050-mRNA-1
chr3_3 CDS 86815084 86815128 86815084 ID=Msa0481050-mRNA-1:cds;Parent=Msa0481050-mRNA-1
chr3_3 CDS 86813109 86813285 86813109 ID=Msa0481050-mRNA-1:cds;Parent=Msa0481050-mRNA-1
chr3_3 three_prime_UTR 86812876 86813108 86812876 ID=Msa0481050-mRNA-1:three_prime_utr;Parent=Msa0481050-mRNA-1
Gene Sequence

>Msa0481050

ATGGCTTCTTCAATATCCAACACAAAAATACTACTGCATGCTCATTCCTTCAAAAATCCTTTTTCTTTTCGTTCTTCTCGTTTGATTCTATCCATTCCTTTCTACTCCAAAAACAAACCACAGTTGCTTCATTCTCGTTTCTCTTCTTCCCTCAAAGTAGCTTCTTCTTCTTCTTCTGAAGCTCAAAACAATTTGCAAGGGAAACCGGTTCTTTCACAAGGTAAAGGAGGAATTGTGGAGGAACAGAGCAGCTATTCCTATCAACAAGAGGAAGTAGAAGAAGAAGATAGTACTGATGAACAAGATAAGTGGGTTGATTGGGAAGATCAGATTTTGGAAGATACCGTTCCTTTGGTTGGTTTTGTTAGAACAATCCTTCATTCTGGACAATATGAAAATGGAGATAGACTAAGCCCAGAGCACGAGAAAACCATTGTTGAGAAGCTCCTTCCATTTCACCCTGAATCTCAGAAAAAGATTGGATGTGGAATCGATTATATCACGGGATTGCATACTTACCTGGAATTGTCACCTACCCCAATGCACTCAATTGGCTACCATCCCAATTTTGATCGCTCTAGGTGTATGTTCATAGTGCGACAAGATGGAGAGCTGGTAGACTTTTCATATTGGAAATGCATAAAGGGCTTGATCAGAAAGAATTATCCATTATATGCAGACAGTTTCATTCTCAGGCACTTCAGGAAGCGGAGTCGTAATTTGTGA

Protein sequence

>Msa0481050

MASSISNTKILLHAHSFKNPFSFRSSRLILSIPFYSKNKPQLLHSRFSSSLKVASSSSSEAQNNLQGKPVLSQGKGGIVEEQSSYSYQQEEVEEEDSTDEQDKWVDWEDQILEDTVPLVGFVRTILHSGQYENGDRLSPEHEKTIVEKLLPFHPESQKKIGCGIDYITGLHTYLELSPTPMHSIGYHPNFDRSRCMFIVRQDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRSRNL*