Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382590 | XP_013461885.1 | 100.000 | 80 | 0 | 0 | 1 | 80 | 61 | 140 | 8.94e-50 | 163 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382590 | sp|Q9SN73|BSD2_ARATH | 68.750 | 80 | 25 | 0 | 1 | 80 | 57 | 136 | 6.40e-36 | 120 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382590 | A0A072VCQ1 | 100.000 | 80 | 0 | 0 | 1 | 80 | 61 | 140 | 4.27e-50 | 163 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006050 | Msa0382590 | 0.812668 | 3.775155e-51 | -8.615850e-47 |
Msa0014410 | Msa0382590 | 0.846735 | 1.802148e-59 | -8.615850e-47 |
Msa0020630 | Msa0382590 | 0.841708 | 4.033820e-58 | -8.615850e-47 |
Msa0037820 | Msa0382590 | 0.820978 | 5.152941e-53 | -8.615850e-47 |
Msa0040550 | Msa0382590 | -0.808767 | 2.634800e-50 | -8.615850e-47 |
Msa0043940 | Msa0382590 | 0.850052 | 2.178883e-60 | -8.615850e-47 |
Msa0044180 | Msa0382590 | 0.840156 | 1.029977e-57 | -8.615850e-47 |
Msa0050720 | Msa0382590 | 0.802536 | 5.354084e-49 | -8.615850e-47 |
Msa0050770 | Msa0382590 | 0.805888 | 1.073728e-49 | -8.615850e-47 |
Msa0061320 | Msa0382590 | 0.812884 | 3.386411e-51 | -8.615850e-47 |
Msa0064550 | Msa0382590 | 0.882032 | 1.462807e-70 | -8.615850e-47 |
Msa0068410 | Msa0382590 | 0.823630 | 1.249174e-53 | -8.615850e-47 |
Msa0079770 | Msa0382590 | 0.801394 | 9.193295e-49 | -8.615850e-47 |
Msa0084630 | Msa0382590 | 0.820033 | 8.493409e-53 | -8.615850e-47 |
Msa0084680 | Msa0382590 | 0.836609 | 8.466696e-57 | -8.615850e-47 |
Msa0089510 | Msa0382590 | 0.805520 | 1.282903e-49 | -8.615850e-47 |
Msa0089520 | Msa0382590 | 0.805518 | 1.284023e-49 | -8.615850e-47 |
Msa0090860 | Msa0382590 | 0.825557 | 4.392370e-54 | -8.615850e-47 |
Msa0091480 | Msa0382590 | 0.808081 | 3.690301e-50 | -8.615850e-47 |
Msa0092710 | Msa0382590 | 0.844371 | 7.878341e-59 | -8.615850e-47 |
Msa0103160 | Msa0382590 | 0.828111 | 1.078152e-54 | -8.615850e-47 |
Msa0108070 | Msa0382590 | 0.850716 | 1.418153e-60 | -8.615850e-47 |
Msa0109490 | Msa0382590 | 0.860407 | 2.111341e-63 | -8.615850e-47 |
Msa0114240 | Msa0382590 | 0.809906 | 1.501125e-50 | -8.615850e-47 |
Msa0114250 | Msa0382590 | 0.812666 | 3.779791e-51 | -8.615850e-47 |
Msa0115010 | Msa0382590 | 0.809910 | 1.498355e-50 | -8.615850e-47 |
Msa0125440 | Msa0382590 | 0.814032 | 1.894144e-51 | -8.615850e-47 |
Msa0130800 | Msa0382590 | 0.816576 | 5.150724e-52 | -8.615850e-47 |
Msa0140290 | Msa0382590 | 0.859679 | 3.499314e-63 | -8.615850e-47 |
Msa0154220 | Msa0382590 | 0.851025 | 1.161023e-60 | -8.615850e-47 |
Msa0154240 | Msa0382590 | 0.865216 | 6.935056e-65 | -8.615850e-47 |
Msa0154270 | Msa0382590 | 0.883789 | 3.331295e-71 | -8.615850e-47 |
Msa0155610 | Msa0382590 | 0.863972 | 1.698597e-64 | -8.615850e-47 |
Msa0159750 | Msa0382590 | 0.844908 | 5.646830e-59 | -8.615850e-47 |
Msa0166570 | Msa0382590 | 0.817286 | 3.567935e-52 | -8.615850e-47 |
Msa0171920 | Msa0382590 | 0.855753 | 5.104190e-62 | -8.615850e-47 |
Msa0178940 | Msa0382590 | 0.839609 | 1.430385e-57 | -8.615850e-47 |
Msa0182640 | Msa0382590 | 0.840597 | 7.901622e-58 | -8.615850e-47 |
Msa0183560 | Msa0382590 | 0.833789 | 4.358203e-56 | -8.615850e-47 |
Msa0197030 | Msa0382590 | 0.855774 | 5.032973e-62 | -8.615850e-47 |
Msa0199740 | Msa0382590 | 0.854120 | 1.521276e-61 | -8.615850e-47 |
Msa0216210 | Msa0382590 | 0.830203 | 3.351739e-55 | -8.615850e-47 |
Msa0218530 | Msa0382590 | -0.808410 | 3.140240e-50 | -8.615850e-47 |
Msa0218650 | Msa0382590 | -0.823107 | 1.655196e-53 | -8.615850e-47 |
Msa0224370 | Msa0382590 | 0.816070 | 6.682742e-52 | -8.615850e-47 |
Msa0224400 | Msa0382590 | 0.810501 | 1.117036e-50 | -8.615850e-47 |
Msa0377280 | Msa0382590 | 0.815688 | 8.133902e-52 | -8.615850e-47 |
Msa0380520 | Msa0382590 | 0.800435 | 1.443568e-48 | -8.615850e-47 |
Msa0380650 | Msa0382590 | 0.840980 | 6.271130e-58 | -8.615850e-47 |
Msa0382500 | Msa0382590 | 0.803479 | 3.418820e-49 | -8.615850e-47 |
Msa0382590 | Msa0387970 | 0.811587 | 6.496466e-51 | -8.615850e-47 |
Msa0382590 | Msa0389060 | 0.803876 | 2.827468e-49 | -8.615850e-47 |
Msa0382590 | Msa0392050 | 0.898773 | 3.820312e-77 | -8.615850e-47 |
Msa0382590 | Msa0392540 | 0.835979 | 1.224312e-56 | -8.615850e-47 |
Msa0382590 | Msa0401340 | 0.883002 | 6.481967e-71 | -8.615850e-47 |
Msa0382590 | Msa0404690 | 0.816226 | 6.169425e-52 | -8.615850e-47 |
Msa0382590 | Msa0411560 | 0.809192 | 2.136141e-50 | -8.615850e-47 |
Msa0382590 | Msa0430020 | 0.804564 | 2.033173e-49 | -8.615850e-47 |
Msa0382590 | Msa0430290 | 0.844442 | 7.540784e-59 | -8.615850e-47 |
Msa0382590 | Msa0431520 | 0.804540 | 2.056600e-49 | -8.615850e-47 |
Msa0382590 | Msa0432720 | 0.938211 | 9.778877e-99 | -8.615850e-47 |
Msa0382590 | Msa0440310 | 0.839598 | 1.439801e-57 | -8.615850e-47 |
Msa0382590 | Msa0448080 | 0.855610 | 5.619073e-62 | -8.615850e-47 |
Msa0382590 | Msa0448120 | 0.882324 | 1.145738e-70 | -8.615850e-47 |
Msa0382590 | Msa0462590 | 0.817825 | 2.697080e-52 | -8.615850e-47 |
Msa0382590 | Msa0465800 | 0.811952 | 5.412391e-51 | -8.615850e-47 |
Msa0382590 | Msa0469950 | 0.899378 | 2.103115e-77 | -8.615850e-47 |
Msa0382590 | Msa0472740 | 0.833946 | 3.982007e-56 | -8.615850e-47 |
Msa0382590 | Msa0481490 | 0.848186 | 7.193563e-60 | -8.615850e-47 |
Msa0382590 | Msa0486530 | 0.813672 | 2.273834e-51 | -8.615850e-47 |
Msa0382590 | Msa0487490 | 0.864158 | 1.487180e-64 | -8.615850e-47 |
Msa0382590 | Msa0525270 | 0.957070 | 6.567226e-115 | -8.615850e-47 |
Msa0382590 | Msa0525280 | 0.951176 | 3.540422e-109 | -8.615850e-47 |
Msa0382590 | Msa0530340 | 0.859471 | 4.043424e-63 | -8.615850e-47 |
Msa0382590 | Msa0530930 | 0.810422 | 1.161661e-50 | -8.615850e-47 |
Msa0382590 | Msa0530950 | 0.841533 | 4.485948e-58 | -8.615850e-47 |
Msa0382590 | Msa0532840 | 0.823384 | 1.426115e-53 | -8.615850e-47 |
Msa0382590 | Msa0533010 | 0.823342 | 1.458297e-53 | -8.615850e-47 |
Msa0382590 | Msa0545230 | 0.840554 | 8.110042e-58 | -8.615850e-47 |
Msa0382590 | Msa0546080 | 0.821440 | 4.033020e-53 | -8.615850e-47 |
Msa0382590 | Msa0546740 | 0.820003 | 8.626892e-53 | -8.615850e-47 |
Msa0382590 | Msa0548210 | 0.802561 | 5.291703e-49 | -8.615850e-47 |
Msa0382590 | Msa0549540 | 0.869156 | 3.822814e-66 | -8.615850e-47 |
Msa0382590 | Msa0549760 | 0.855644 | 5.495106e-62 | -8.615850e-47 |
Msa0382590 | Msa0557490 | 0.811550 | 6.621097e-51 | -8.615850e-47 |
Msa0382590 | Msa0568610 | 0.836924 | 7.036157e-57 | -8.615850e-47 |
Msa0382590 | Msa0583740 | 0.863323 | 2.701905e-64 | -8.615850e-47 |
Msa0382590 | Msa0584280 | 0.869282 | 3.478869e-66 | -8.615850e-47 |
Msa0382590 | Msa0587900 | 0.819384 | 1.195060e-52 | -8.615850e-47 |
Msa0382590 | Msa0589290 | 0.803132 | 4.034408e-49 | -8.615850e-47 |
Msa0382590 | Msa0589640 | 0.808449 | 3.080893e-50 | -8.615850e-47 |
Msa0382590 | Msa0600820 | 0.836040 | 1.181247e-56 | -8.615850e-47 |
Msa0382590 | Msa0604880 | 0.845859 | 3.121811e-59 | -8.615850e-47 |
Msa0382590 | Msa0605250 | 0.877024 | 8.755033e-69 | -8.615850e-47 |
Msa0382590 | Msa0605620 | 0.807029 | 6.171605e-50 | -8.615850e-47 |
Msa0382590 | Msa0609790 | 0.860720 | 1.696154e-63 | -8.615850e-47 |
Msa0382590 | Msa0618520 | 0.839512 | 1.515605e-57 | -8.615850e-47 |
Msa0382590 | Msa0622250 | 0.853201 | 2.793594e-61 | -8.615850e-47 |
Msa0382590 | Msa0627050 | 0.851052 | 1.140818e-60 | -8.615850e-47 |
Msa0382590 | Msa0628100 | 0.825455 | 4.643101e-54 | -8.615850e-47 |
Msa0382590 | Msa0636720 | 0.858399 | 8.459799e-63 | -8.615850e-47 |
Msa0382590 | Msa0645820 | 0.809088 | 2.249143e-50 | -8.615850e-47 |
Msa0382590 | Msa0646190 | 0.854853 | 9.333251e-62 | -8.615850e-47 |
Msa0382590 | Msa0646340 | 0.825109 | 5.608470e-54 | -8.615850e-47 |
Msa0382590 | Msa0646570 | 0.801225 | 9.953085e-49 | -8.615850e-47 |
Msa0382590 | Msa0649310 | 0.837686 | 4.490816e-57 | -8.615850e-47 |
Msa0382590 | Msa0651400 | 0.826781 | 2.246674e-54 | -8.615850e-47 |
Msa0382590 | Msa0665790 | 0.822775 | 1.978135e-53 | -8.615850e-47 |
Msa0382590 | Msa0667970 | 0.835670 | 1.465780e-56 | -8.615850e-47 |
Msa0382590 | Msa0675010 | 0.816609 | 5.062536e-52 | -8.615850e-47 |
Msa0382590 | Msa0676100 | 0.844487 | 7.332191e-59 | -8.615850e-47 |
Msa0382590 | Msa0679780 | 0.816372 | 5.722289e-52 | -8.615850e-47 |
Msa0382590 | Msa0681210 | 0.828264 | 9.904278e-55 | -8.615850e-47 |
Msa0382590 | Msa0685540 | 0.812793 | 3.546020e-51 | -8.615850e-47 |
Msa0382590 | Msa0685890 | 0.830983 | 2.159818e-55 | -8.615850e-47 |
Msa0382590 | Msa0692420 | 0.835401 | 1.714787e-56 | -8.615850e-47 |
Msa0382590 | Msa0704220 | 0.852728 | 3.814822e-61 | -8.615850e-47 |
Msa0382590 | Msa0729550 | 0.837594 | 4.740707e-57 | -8.615850e-47 |
Msa0382590 | Msa0738880 | 0.849504 | 3.100036e-60 | -8.615850e-47 |
Msa0382590 | Msa0740210 | 0.812670 | 3.772480e-51 | -8.615850e-47 |
Msa0382590 | Msa0748330 | 0.852462 | 4.544267e-61 | -8.615850e-47 |
Msa0382590 | Msa0760890 | 0.811036 | 8.556565e-51 | -8.615850e-47 |
Msa0382590 | Msa0769830 | 0.864365 | 1.281401e-64 | -8.615850e-47 |
Msa0382590 | Msa0780140 | 0.815908 | 7.262113e-52 | -8.615850e-47 |
Msa0382590 | Msa0781390 | 0.803245 | 3.821944e-49 | -8.615850e-47 |
Msa0382590 | Msa0790640 | 0.838762 | 2.372115e-57 | -8.615850e-47 |
Msa0382590 | Msa0802210 | 0.815542 | 8.764608e-52 | -8.615850e-47 |
Msa0382590 | Msa0806720 | 0.904316 | 1.394412e-79 | -8.615850e-47 |
Msa0382590 | Msa0806760 | 0.906028 | 2.297514e-80 | -8.615850e-47 |
Msa0382590 | Msa0809300 | 0.823842 | 1.114008e-53 | -8.615850e-47 |
Msa0382590 | Msa0819320 | 0.842420 | 2.614983e-58 | -8.615850e-47 |
Msa0382590 | Msa0819370 | 0.849997 | 2.257460e-60 | -8.615850e-47 |
Msa0382590 | Msa0828570 | 0.826124 | 3.222910e-54 | -8.615850e-47 |
Msa0382590 | Msa0848360 | 0.813452 | 2.542071e-51 | -8.615850e-47 |
Msa0382590 | Msa0848380 | 0.803293 | 3.735034e-49 | -8.615850e-47 |
Msa0382590 | Msa0848760 | 0.863198 | 2.953050e-64 | -8.615850e-47 |
Msa0382590 | Msa0851740 | 0.803027 | 4.241095e-49 | -8.615850e-47 |
Msa0382590 | Msa0853480 | 0.801206 | 1.004382e-48 | -8.615850e-47 |
Msa0382590 | Msa0860920 | 0.801848 | 7.417919e-49 | -8.615850e-47 |
Msa0382590 | Msa0863250 | 0.806441 | 8.214922e-50 | -8.615850e-47 |
Msa0382590 | Msa0882700 | 0.854026 | 1.619119e-61 | -8.615850e-47 |
Msa0382590 | Msa0899700 | 0.809016 | 2.330428e-50 | -8.615850e-47 |
Msa0382590 | Msa0904630 | 0.808239 | 3.414134e-50 | -8.615850e-47 |
Msa0382590 | Msa0909710 | 0.807037 | 6.145679e-50 | -8.615850e-47 |
Msa0382590 | Msa0936690 | 0.835020 | 2.139459e-56 | -8.615850e-47 |
Msa0382590 | Msa0944690 | 0.891536 | 3.630567e-74 | -8.615850e-47 |
Msa0382590 | Msa0945960 | 0.899692 | 1.541301e-77 | -8.615850e-47 |
Msa0382590 | Msa0955260 | 0.806291 | 8.834477e-50 | -8.615850e-47 |
Msa0382590 | Msa0968780 | 0.850024 | 2.218164e-60 | -8.615850e-47 |
Msa0382590 | Msa0971860 | 0.804765 | 1.846018e-49 | -8.615850e-47 |
Msa0382590 | Msa0984000 | 0.895709 | 7.402582e-76 | -8.615850e-47 |
Msa0382590 | Msa1004210 | 0.830575 | 2.718030e-55 | -8.615850e-47 |
Msa0382590 | Msa1014350 | 0.804676 | 1.926506e-49 | -8.615850e-47 |
Msa0382590 | Msa1027790 | 0.807247 | 5.547482e-50 | -8.615850e-47 |
Msa0382590 | Msa1030870 | 0.857979 | 1.128481e-62 | -8.615850e-47 |
Msa0382590 | Msa1034930 | 0.819904 | 9.090705e-53 | -8.615850e-47 |
Msa0382590 | Msa1036250 | 0.864705 | 1.003193e-64 | -8.615850e-47 |
Msa0382590 | Msa1038320 | 0.806438 | 8.226298e-50 | -8.615850e-47 |
Msa0382590 | Msa1046610 | 0.823304 | 1.488539e-53 | -8.615850e-47 |
Msa0382590 | Msa1053690 | 0.809772 | 1.604055e-50 | -8.615850e-47 |
Msa0382590 | Msa1055360 | 0.814015 | 1.910391e-51 | -8.615850e-47 |
Msa0382590 | Msa1063920 | 0.807126 | 5.885057e-50 | -8.615850e-47 |
Msa0382590 | Msa1069960 | 0.862584 | 4.568429e-64 | -8.615850e-47 |
Msa0382590 | Msa1072340 | 0.811988 | 5.315666e-51 | -8.615850e-47 |
Msa0382590 | Msa1075340 | 0.805296 | 1.429469e-49 | -8.615850e-47 |
Msa0382590 | Msa1076520 | 0.857689 | 1.375166e-62 | -8.615850e-47 |
Msa0382590 | Msa1079480 | 0.825103 | 5.625608e-54 | -8.615850e-47 |
Msa0382590 | Msa1082150 | 0.869707 | 2.530199e-66 | -8.615850e-47 |
Msa0382590 | Msa1108140 | 0.803033 | 4.228433e-49 | -8.615850e-47 |
Msa0382590 | Msa1112610 | 0.800675 | 1.289643e-48 | -8.615850e-47 |
Msa0382590 | Msa1118150 | 0.807404 | 5.138761e-50 | -8.615850e-47 |
Msa0382590 | Msa1118980 | 0.805225 | 1.479544e-49 | -8.615850e-47 |
Msa0382590 | Msa1119860 | 0.850939 | 1.227531e-60 | -8.615850e-47 |
Msa0382590 | Msa1122720 | 0.828067 | 1.104845e-54 | -8.615850e-47 |
Msa0382590 | Msa1134560 | 0.818103 | 2.334432e-52 | -8.615850e-47 |
Msa0382590 | Msa1144700 | 0.803176 | 3.950252e-49 | -8.615850e-47 |
Msa0382590 | Msa1144730 | 0.898734 | 3.968222e-77 | -8.615850e-47 |
Msa0382590 | Msa1144950 | 0.835499 | 1.619450e-56 | -8.615850e-47 |
Msa0382590 | Msa1151820 | 0.834206 | 3.428061e-56 | -8.615850e-47 |
Msa0382590 | Msa1157730 | 0.842360 | 2.712302e-58 | -8.615850e-47 |
Msa0382590 | Msa1162730 | 0.816390 | 5.667269e-52 | -8.615850e-47 |
Msa0382590 | Msa1173380 | 0.863601 | 2.216571e-64 | -8.615850e-47 |
Msa0382590 | Msa1177240 | 0.866154 | 3.509136e-65 | -8.615850e-47 |
Msa0382590 | Msa1182800 | 0.810939 | 8.982329e-51 | -8.615850e-47 |
Msa0382590 | Msa1182830 | 0.831244 | 1.863107e-55 | -8.615850e-47 |
Msa0382590 | Msa1184010 | 0.808598 | 2.862455e-50 | -8.615850e-47 |
Msa0382590 | Msa1222030 | -0.810107 | 1.358599e-50 | -8.615850e-47 |
Msa0382590 | Msa1226880 | 0.807823 | 4.187118e-50 | -8.615850e-47 |
Msa0382590 | Msa1228350 | 0.803000 | 4.295929e-49 | -8.615850e-47 |
Msa0382590 | Msa1238730 | 0.817734 | 2.827908e-52 | -8.615850e-47 |
Msa0382590 | Msa1272950 | 0.802753 | 4.831709e-49 | -8.615850e-47 |
Msa0382590 | Msa1281270 | 0.847007 | 1.518664e-59 | -8.615850e-47 |
Msa0382590 | Msa1286680 | 0.803126 | 4.045617e-49 | -8.615850e-47 |
Msa0382590 | Msa1293050 | 0.880067 | 7.447342e-70 | -8.615850e-47 |
Msa0382590 | Msa1306190 | 0.854465 | 1.209332e-61 | -8.615850e-47 |
Msa0382590 | Msa1306200 | 0.850678 | 1.454040e-60 | -8.615850e-47 |
Msa0382590 | Msa1317030 | 0.854918 | 8.936955e-62 | -8.615850e-47 |
Msa0382590 | Msa1320380 | 0.848130 | 7.457312e-60 | -8.615850e-47 |
Msa0382590 | Msa1326400 | 0.809042 | 2.300324e-50 | -8.615850e-47 |
Msa0382590 | Msa1337090 | 0.800143 | 1.654576e-48 | -8.615850e-47 |
Msa0382590 | Msa1338590 | 0.828135 | 1.063936e-54 | -8.615850e-47 |
Msa0382590 | Msa1349810 | 0.864277 | 1.364809e-64 | -8.615850e-47 |
Msa0382590 | Msa1354090 | 0.875469 | 3.007232e-68 | -8.615850e-47 |
Msa0382590 | Msa1358340 | 0.858950 | 5.791898e-63 | -8.615850e-47 |
Msa0382590 | Msa1359890 | 0.846273 | 2.408524e-59 | -8.615850e-47 |
Msa0382590 | Msa1361190 | 0.830697 | 2.537370e-55 | -8.615850e-47 |
Msa0382590 | Msa1376350 | 0.803877 | 2.826935e-49 | -8.615850e-47 |
Msa0382590 | Msa1378460 | 0.826287 | 2.947334e-54 | -8.615850e-47 |
Msa0382590 | Msa1378470 | 0.854076 | 1.566226e-61 | -8.615850e-47 |
Msa0382590 | Msa1380720 | 0.823000 | 1.752669e-53 | -8.615850e-47 |
Msa0382590 | Msa1394900 | 0.879203 | 1.508706e-69 | -8.615850e-47 |
Msa0382590 | Msa1405770 | 0.804727 | 1.880605e-49 | -8.615850e-47 |
Msa0382590 | Msa1406020 | 0.802489 | 5.475408e-49 | -8.615850e-47 |
Msa0382590 | Msa1407210 | -0.803626 | 3.186103e-49 | -8.615850e-47 |
Msa0382590 | Msa1412520 | 0.821382 | 4.159938e-53 | -8.615850e-47 |
Msa0382590 | Msa1418200 | 0.803951 | 2.727797e-49 | -8.615850e-47 |
Msa0382590 | Msa1420520 | 0.802363 | 5.813943e-49 | -8.615850e-47 |
Msa0382590 | Msa1421870 | 0.811355 | 7.298153e-51 | -8.615850e-47 |
Msa0382590 | Msa1422890 | 0.850600 | 1.529565e-60 | -8.615850e-47 |
Msa0382590 | Msa1423190 | 0.818676 | 1.731205e-52 | -8.615850e-47 |
Msa0382590 | Msa1423230 | 0.814092 | 1.837178e-51 | -8.615850e-47 |
Msa0382590 | Msa1430760 | 0.804347 | 2.256996e-49 | -8.615850e-47 |
Msa0382590 | Msa1434660 | 0.875926 | 2.095995e-68 | -8.615850e-47 |
Msa0382590 | Msa1439120 | 0.857582 | 1.479220e-62 | -8.615850e-47 |
Msa0382590 | Msa1440220 | 0.852394 | 4.750789e-61 | -8.615850e-47 |
Msa0382590 | Msa1455660 | 0.856449 | 3.193780e-62 | -8.615850e-47 |
Msa0382590 | Msa1459540 | 0.852868 | 3.481091e-61 | -8.615850e-47 |
Msa0382590 | Msa1466350 | 0.815748 | 7.884850e-52 | -8.615850e-47 |
Msa0238860 | Msa0382590 | 0.829656 | 4.555281e-55 | -8.615850e-47 |
Msa0242290 | Msa0382590 | 0.871112 | 8.760265e-67 | -8.615850e-47 |
Msa0253160 | Msa0382590 | 0.838621 | 2.578752e-57 | -8.615850e-47 |
Msa0260190 | Msa0382590 | 0.872319 | 3.484636e-67 | -8.615850e-47 |
Msa0265580 | Msa0382590 | 0.863233 | 2.881194e-64 | -8.615850e-47 |
Msa0276590 | Msa0382590 | 0.846828 | 1.699774e-59 | -8.615850e-47 |
Msa0280500 | Msa0382590 | 0.805163 | 1.524301e-49 | -8.615850e-47 |
Msa0288330 | Msa0382590 | 0.800785 | 1.224320e-48 | -8.615850e-47 |
Msa0291940 | Msa0382590 | 0.829539 | 4.866000e-55 | -8.615850e-47 |
Msa0295570 | Msa0382590 | 0.841651 | 4.175157e-58 | -8.615850e-47 |
Msa0296000 | Msa0382590 | 0.820052 | 8.408699e-53 | -8.615850e-47 |
Msa0298830 | Msa0382590 | 0.812718 | 3.681109e-51 | -8.615850e-47 |
Msa0303440 | Msa0382590 | 0.867532 | 1.276471e-65 | -8.615850e-47 |
Msa0303500 | Msa0382590 | 0.838235 | 3.244019e-57 | -8.615850e-47 |
Msa0309650 | Msa0382590 | -0.811725 | 6.065400e-51 | -8.615850e-47 |
Msa0316610 | Msa0382590 | 0.807347 | 5.284977e-50 | -8.615850e-47 |
Msa0318270 | Msa0382590 | 0.801913 | 7.195826e-49 | -8.615850e-47 |
Msa0333900 | Msa0382590 | 0.820203 | 7.764522e-53 | -8.615850e-47 |
Msa0334020 | Msa0382590 | 0.820475 | 6.725564e-53 | -8.615850e-47 |
Msa0334980 | Msa0382590 | 0.828290 | 9.757951e-55 | -8.615850e-47 |
Msa0344680 | Msa0382590 | 0.897707 | 1.083001e-76 | -8.615850e-47 |
Msa0346790 | Msa0382590 | 0.828828 | 7.234915e-55 | -8.615850e-47 |
Msa0354390 | Msa0382590 | 0.864848 | 9.046514e-65 | -8.615850e-47 |
Msa0358290 | Msa0382590 | 0.818330 | 2.073765e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382590 | MtrunA17_Chr3g0137861 | 100.000 | 80 | 0 | 0 | 1 | 80 | 61 | 140 | 8.23e-54 | 163 |
Msa0382590 | MtrunA17_Chr4g0063651 | 63.750 | 80 | 28 | 1 | 1 | 79 | 53 | 132 | 1.09e-31 | 107 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0382590 | AT3G47650.1 | 68.750 | 80 | 25 | 0 | 1 | 80 | 57 | 136 | 6.51e-37 | 120 |
Find 28 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAATGAAGTATGTAATAA+TGG | 0.243773 | 3_1:+85229539 | None:intergenic |
GTGCCTCCTGTTGGCTTTGC+GGG | 0.255239 | 3_1:-85230066 | Msa0382590:intron |
TCAGCACAGATGACACTATT+TGG | 0.263290 | 3_1:+85230392 | None:intergenic |
TGCAATGGAGCTGGATTTAT+CGG | 0.322631 | 3_1:-85229810 | Msa0382590:CDS |
TCAATGAAGTATGTAATAAT+GGG | 0.409734 | 3_1:+85229540 | None:intergenic |
TTATTACATACTTCATTGAA+TGG | 0.423113 | 3_1:-85229536 | Msa0382590:three_prime_UTR |
GGTGCCTCCTGTTGGCTTTG+CGG | 0.447694 | 3_1:-85230067 | Msa0382590:CDS |
TTGGATCTGTCCCTCCCTAC+TGG | 0.458506 | 3_1:+85229766 | None:intergenic |
TTCGATGGACTGTTTAAAGC+TGG | 0.460757 | 3_1:-85230088 | Msa0382590:CDS |
CAGTTCACTTGTAGCCATAG+TGG | 0.465843 | 3_1:-85229651 | Msa0382590:three_prime_UTR |
TAGGTACCCGCAAAGCCAAC+AGG | 0.473779 | 3_1:+85230060 | None:intergenic |
CTGAACTTGTTCGCAGTCGT+TGG | 0.486092 | 3_1:+85229747 | None:intergenic |
TTAAAGCTGGTGCCTCCTGT+TGG | 0.514045 | 3_1:-85230075 | Msa0382590:CDS |
TGTGGGAATTGCAATGGAGC+TGG | 0.521634 | 3_1:-85229819 | Msa0382590:CDS |
GGCAGGAAGGAGATGTTATG+TGG | 0.530714 | 3_1:-85229837 | Msa0382590:CDS |
TGTGCTGATTGTGATGGAAA+TGG | 0.538508 | 3_1:-85230377 | Msa0382590:intron |
GCAGGAAGGAGATGTTATGT+GGG | 0.542628 | 3_1:-85229836 | Msa0382590:CDS |
TGCTCTCAATGCAAAGGTAG+CGG | 0.551522 | 3_1:-85230130 | Msa0382590:CDS |
CTTGAGCACATATGACCAGT+AGG | 0.554604 | 3_1:-85229781 | Msa0382590:exon |
ATGTTATGTGGGAATTGCAA+TGG | 0.609174 | 3_1:-85229825 | Msa0382590:CDS |
AATGGAGCTGGATTTATCGG+TGG | 0.609254 | 3_1:-85229807 | Msa0382590:CDS |
TTGAGCACATATGACCAGTA+GGG | 0.613108 | 3_1:-85229780 | Msa0382590:exon |
ATTGTCTGCTCTCAATGCAA+AGG | 0.622596 | 3_1:-85230136 | Msa0382590:CDS |
GTCATCTGTGCTGATTGTGA+TGG | 0.623087 | 3_1:-85230383 | Msa0382590:CDS |
AGCACATATGACCAGTAGGG+AGG | 0.624035 | 3_1:-85229777 | Msa0382590:exon |
CACTATCATACTGATGCTCA+AGG | 0.627147 | 3_1:-85229598 | Msa0382590:three_prime_UTR |
GCACATATGACCAGTAGGGA+GGG | 0.642431 | 3_1:-85229776 | Msa0382590:exon |
GTACCCGCAAAGCCAACAGG+AGG | 0.718423 | 3_1:+85230063 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAATAAAAAAATGC+AGG | - | chr3_1:85230326-85230345 | Msa0382590:intron | 10.0% |
!! | AAAAAAAAATAAAAAAATGC+AGG | - | chr3_1:85230326-85230345 | Msa0382590:intron | 10.0% |
!!! | TTATATTTTGTGTAATTAAC+AGG | - | chr3_1:85229785-85229804 | Msa0382590:CDS | 15.0% |
!!! | ATAGAATGATTTTACTAATT+AGG | + | chr3_1:85229910-85229929 | None:intergenic | 15.0% |
!! | AAAATTTGCATTTAACAATT+AGG | + | chr3_1:85229970-85229989 | None:intergenic | 15.0% |
!!! | TTATATTTTGTGTAATTAAC+AGG | - | chr3_1:85229785-85229804 | Msa0382590:CDS | 15.0% |
!!! | ATAGAATGATTTTACTAATT+AGG | + | chr3_1:85229910-85229929 | None:intergenic | 15.0% |
!! | AAAATTTGCATTTAACAATT+AGG | + | chr3_1:85229970-85229989 | None:intergenic | 15.0% |
!!! | AGATGACATATGATTTTATA+AGG | - | chr3_1:85229596-85229615 | Msa0382590:three_prime_UTR | 20.0% |
!! | CGATGAACAATAATAATATA+AGG | + | chr3_1:85230077-85230096 | None:intergenic | 20.0% |
!! | TCAATGAAGTATGTAATAAT+GGG | + | chr3_1:85230411-85230430 | None:intergenic | 20.0% |
!! | TTCAATGAAGTATGTAATAA+TGG | + | chr3_1:85230412-85230431 | None:intergenic | 20.0% |
!! | TTATTACATACTTCATTGAA+TGG | - | chr3_1:85230412-85230431 | Msa0382590:CDS | 20.0% |
!!! | AGATGACATATGATTTTATA+AGG | - | chr3_1:85229596-85229615 | Msa0382590:three_prime_UTR | 20.0% |
!! | CGATGAACAATAATAATATA+AGG | + | chr3_1:85230077-85230096 | None:intergenic | 20.0% |
!! | TCAATGAAGTATGTAATAAT+GGG | + | chr3_1:85230411-85230430 | None:intergenic | 20.0% |
!! | TTCAATGAAGTATGTAATAA+TGG | + | chr3_1:85230412-85230431 | None:intergenic | 20.0% |
!! | TTATTACATACTTCATTGAA+TGG | - | chr3_1:85230412-85230431 | Msa0382590:CDS | 20.0% |
!!! | TATTTGGTTTTGTGTTTTGT+TGG | + | chr3_1:85229543-85229562 | None:intergenic | 25.0% |
! | CAAGAGAAAATATACATCTA+CGG | - | chr3_1:85229749-85229768 | Msa0382590:three_prime_UTR | 25.0% |
! | TAATAATATAAGGCACATTG+TGG | + | chr3_1:85230067-85230086 | None:intergenic | 25.0% |
!!! | TTTTTTTTTAGCAACCACTA+TGG | + | chr3_1:85230314-85230333 | None:intergenic | 25.0% |
!!! | TATTTGGTTTTGTGTTTTGT+TGG | + | chr3_1:85229543-85229562 | None:intergenic | 25.0% |
! | CAAGAGAAAATATACATCTA+CGG | - | chr3_1:85229749-85229768 | Msa0382590:three_prime_UTR | 25.0% |
! | TAATAATATAAGGCACATTG+TGG | + | chr3_1:85230067-85230086 | None:intergenic | 25.0% |
!!! | TTTTTTTTTAGCAACCACTA+TGG | + | chr3_1:85230314-85230333 | None:intergenic | 25.0% |
AACGATTTACATGCTCATAA+CGG | + | chr3_1:85229675-85229694 | None:intergenic | 30.0% | |
TGCTTCTTGTAATGTATTTG+TGG | - | chr3_1:85229710-85229729 | Msa0382590:three_prime_UTR | 30.0% | |
AATGTATTTGTGGTTGTTGA+AGG | - | chr3_1:85229720-85229739 | Msa0382590:three_prime_UTR | 30.0% | |
! | AACTCTGTTGATATTTTCGA+TGG | - | chr3_1:85229845-85229864 | Msa0382590:intron | 30.0% |
AACGATTTACATGCTCATAA+CGG | + | chr3_1:85229675-85229694 | None:intergenic | 30.0% | |
TGCTTCTTGTAATGTATTTG+TGG | - | chr3_1:85229710-85229729 | Msa0382590:three_prime_UTR | 30.0% | |
AATGTATTTGTGGTTGTTGA+AGG | - | chr3_1:85229720-85229739 | Msa0382590:three_prime_UTR | 30.0% | |
! | AACTCTGTTGATATTTTCGA+TGG | - | chr3_1:85229845-85229864 | Msa0382590:intron | 30.0% |
AAGGCTTCATTGTATTCTAG+AGG | + | chr3_1:85230005-85230024 | None:intergenic | 35.0% | |
! | AATGAAGCCTTATGATCAGT+AGG | - | chr3_1:85230014-85230033 | Msa0382590:intron | 35.0% |
! | ATGAAGCCTTATGATCAGTA+GGG | - | chr3_1:85230015-85230034 | Msa0382590:intron | 35.0% |
!!! | TTCATCGTTTTTTACTCCAG+AGG | - | chr3_1:85230090-85230109 | Msa0382590:CDS | 35.0% |
ATGTTATGTGGGAATTGCAA+TGG | - | chr3_1:85230123-85230142 | Msa0382590:CDS | 35.0% | |
! | TTGTTGGTTGTCATTTGTAG+CGG | + | chr3_1:85229527-85229546 | None:intergenic | 35.0% |
AAGGCTTCATTGTATTCTAG+AGG | + | chr3_1:85230005-85230024 | None:intergenic | 35.0% | |
! | AATGAAGCCTTATGATCAGT+AGG | - | chr3_1:85230014-85230033 | Msa0382590:intron | 35.0% |
! | ATGAAGCCTTATGATCAGTA+GGG | - | chr3_1:85230015-85230034 | Msa0382590:intron | 35.0% |
!!! | TTCATCGTTTTTTACTCCAG+AGG | - | chr3_1:85230090-85230109 | Msa0382590:CDS | 35.0% |
ATGTTATGTGGGAATTGCAA+TGG | - | chr3_1:85230123-85230142 | Msa0382590:CDS | 35.0% | |
TCAGCACAGATGACACTATT+TGG | + | chr3_1:85229559-85229578 | None:intergenic | 40.0% | |
!! | TGTGCTGATTGTGATGGAAA+TGG | - | chr3_1:85229571-85229590 | Msa0382590:three_prime_UTR | 40.0% |
ATTGTCTGCTCTCAATGCAA+AGG | - | chr3_1:85229812-85229831 | Msa0382590:CDS | 40.0% | |
!! | TTCGATGGACTGTTTAAAGC+TGG | - | chr3_1:85229860-85229879 | Msa0382590:intron | 40.0% |
TGCAATGGAGCTGGATTTAT+CGG | - | chr3_1:85230138-85230157 | Msa0382590:CDS | 40.0% | |
TTGAGCACATATGACCAGTA+GGG | - | chr3_1:85230168-85230187 | Msa0382590:intron | 40.0% | |
CACTATCATACTGATGCTCA+AGG | - | chr3_1:85230350-85230369 | Msa0382590:intron | 40.0% | |
TCAGCACAGATGACACTATT+TGG | + | chr3_1:85229559-85229578 | None:intergenic | 40.0% | |
!! | TGTGCTGATTGTGATGGAAA+TGG | - | chr3_1:85229571-85229590 | Msa0382590:three_prime_UTR | 40.0% |
ATTGTCTGCTCTCAATGCAA+AGG | - | chr3_1:85229812-85229831 | Msa0382590:CDS | 40.0% | |
!! | TTCGATGGACTGTTTAAAGC+TGG | - | chr3_1:85229860-85229879 | Msa0382590:intron | 40.0% |
TGCAATGGAGCTGGATTTAT+CGG | - | chr3_1:85230138-85230157 | Msa0382590:CDS | 40.0% | |
TTGAGCACATATGACCAGTA+GGG | - | chr3_1:85230168-85230187 | Msa0382590:intron | 40.0% | |
CACTATCATACTGATGCTCA+AGG | - | chr3_1:85230350-85230369 | Msa0382590:intron | 40.0% | |
!! | GTCATCTGTGCTGATTGTGA+TGG | - | chr3_1:85229565-85229584 | Msa0382590:three_prime_UTR | 45.0% |
TGCTCTCAATGCAAAGGTAG+CGG | - | chr3_1:85229818-85229837 | Msa0382590:CDS | 45.0% | |
! | AAGCCTTATGATCAGTAGGG+AGG | - | chr3_1:85230018-85230037 | Msa0382590:intron | 45.0% |
GTTCCTCCCTACTGATCATA+AGG | + | chr3_1:85230024-85230043 | None:intergenic | 45.0% | |
!!! | TCGTTTTTTACTCCAGAGGC+AGG | - | chr3_1:85230094-85230113 | Msa0382590:CDS | 45.0% |
! | TTTTTACTCCAGAGGCAGGA+AGG | - | chr3_1:85230098-85230117 | Msa0382590:CDS | 45.0% |
GCAGGAAGGAGATGTTATGT+GGG | - | chr3_1:85230112-85230131 | Msa0382590:CDS | 45.0% | |
AATGGAGCTGGATTTATCGG+TGG | - | chr3_1:85230141-85230160 | Msa0382590:CDS | 45.0% | |
CTTGAGCACATATGACCAGT+AGG | - | chr3_1:85230167-85230186 | Msa0382590:intron | 45.0% | |
CAGTTCACTTGTAGCCATAG+TGG | - | chr3_1:85230297-85230316 | Msa0382590:intron | 45.0% | |
!! | GTCATCTGTGCTGATTGTGA+TGG | - | chr3_1:85229565-85229584 | Msa0382590:three_prime_UTR | 45.0% |
TGCTCTCAATGCAAAGGTAG+CGG | - | chr3_1:85229818-85229837 | Msa0382590:CDS | 45.0% | |
! | AAGCCTTATGATCAGTAGGG+AGG | - | chr3_1:85230018-85230037 | Msa0382590:intron | 45.0% |
GTTCCTCCCTACTGATCATA+AGG | + | chr3_1:85230024-85230043 | None:intergenic | 45.0% | |
!!! | TCGTTTTTTACTCCAGAGGC+AGG | - | chr3_1:85230094-85230113 | Msa0382590:CDS | 45.0% |
! | TTTTTACTCCAGAGGCAGGA+AGG | - | chr3_1:85230098-85230117 | Msa0382590:CDS | 45.0% |
GCAGGAAGGAGATGTTATGT+GGG | - | chr3_1:85230112-85230131 | Msa0382590:CDS | 45.0% | |
AATGGAGCTGGATTTATCGG+TGG | - | chr3_1:85230141-85230160 | Msa0382590:CDS | 45.0% | |
CTTGAGCACATATGACCAGT+AGG | - | chr3_1:85230167-85230186 | Msa0382590:intron | 45.0% | |
CAGTTCACTTGTAGCCATAG+TGG | - | chr3_1:85230297-85230316 | Msa0382590:intron | 45.0% | |
TTAAAGCTGGTGCCTCCTGT+TGG | - | chr3_1:85229873-85229892 | Msa0382590:intron | 50.0% | |
TAACATCTCCTTCCTGCCTC+TGG | + | chr3_1:85230109-85230128 | None:intergenic | 50.0% | |
GGCAGGAAGGAGATGTTATG+TGG | - | chr3_1:85230111-85230130 | Msa0382590:CDS | 50.0% | |
TGTGGGAATTGCAATGGAGC+TGG | - | chr3_1:85230129-85230148 | Msa0382590:CDS | 50.0% | |
AGCACATATGACCAGTAGGG+AGG | - | chr3_1:85230171-85230190 | Msa0382590:intron | 50.0% | |
GCACATATGACCAGTAGGGA+GGG | - | chr3_1:85230172-85230191 | Msa0382590:intron | 50.0% | |
! | CTGAACTTGTTCGCAGTCGT+TGG | + | chr3_1:85230204-85230223 | None:intergenic | 50.0% |
TTAAAGCTGGTGCCTCCTGT+TGG | - | chr3_1:85229873-85229892 | Msa0382590:intron | 50.0% | |
TAACATCTCCTTCCTGCCTC+TGG | + | chr3_1:85230109-85230128 | None:intergenic | 50.0% | |
GGCAGGAAGGAGATGTTATG+TGG | - | chr3_1:85230111-85230130 | Msa0382590:CDS | 50.0% | |
TGTGGGAATTGCAATGGAGC+TGG | - | chr3_1:85230129-85230148 | Msa0382590:CDS | 50.0% | |
AGCACATATGACCAGTAGGG+AGG | - | chr3_1:85230171-85230190 | Msa0382590:intron | 50.0% | |
GCACATATGACCAGTAGGGA+GGG | - | chr3_1:85230172-85230191 | Msa0382590:intron | 50.0% | |
! | CTGAACTTGTTCGCAGTCGT+TGG | + | chr3_1:85230204-85230223 | None:intergenic | 50.0% |
TAGGTACCCGCAAAGCCAAC+AGG | + | chr3_1:85229891-85229910 | None:intergenic | 55.0% | |
TTGGATCTGTCCCTCCCTAC+TGG | + | chr3_1:85230185-85230204 | None:intergenic | 55.0% | |
TAGGTACCCGCAAAGCCAAC+AGG | + | chr3_1:85229891-85229910 | None:intergenic | 55.0% | |
TTGGATCTGTCCCTCCCTAC+TGG | + | chr3_1:85230185-85230204 | None:intergenic | 55.0% | |
!! | GGTGCCTCCTGTTGGCTTTG+CGG | - | chr3_1:85229881-85229900 | Msa0382590:intron | 60.0% |
!! | GTGCCTCCTGTTGGCTTTGC+GGG | - | chr3_1:85229882-85229901 | Msa0382590:intron | 60.0% |
GTACCCGCAAAGCCAACAGG+AGG | + | chr3_1:85229888-85229907 | None:intergenic | 60.0% | |
!! | GGTGCCTCCTGTTGGCTTTG+CGG | - | chr3_1:85229881-85229900 | Msa0382590:intron | 60.0% |
!! | GTGCCTCCTGTTGGCTTTGC+GGG | - | chr3_1:85229882-85229901 | Msa0382590:intron | 60.0% |
GTACCCGCAAAGCCAACAGG+AGG | + | chr3_1:85229888-85229907 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 85229526 | 85230444 | 85229526 | ID=Msa0382590;Name=Msa0382590 |
chr3_1 | mRNA | 85229526 | 85230444 | 85229526 | ID=Msa0382590-mRNA-1;Parent=Msa0382590;Name=Msa0382590-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.5|0.33|1|1|1|3|256|80 |
chr3_1 | exon | 85229526 | 85229860 | 85229526 | ID=Msa0382590-mRNA-1:exon:22338;Parent=Msa0382590-mRNA-1 |
chr3_1 | exon | 85230067 | 85230163 | 85230067 | ID=Msa0382590-mRNA-1:exon:22337;Parent=Msa0382590-mRNA-1 |
chr3_1 | exon | 85230378 | 85230444 | 85230378 | ID=Msa0382590-mRNA-1:exon:22336;Parent=Msa0382590-mRNA-1 |
chr3_1 | CDS | 85230378 | 85230444 | 85230378 | ID=Msa0382590-mRNA-1:cds;Parent=Msa0382590-mRNA-1 |
chr3_1 | CDS | 85230067 | 85230163 | 85230067 | ID=Msa0382590-mRNA-1:cds;Parent=Msa0382590-mRNA-1 |
chr3_1 | CDS | 85229782 | 85229860 | 85229782 | ID=Msa0382590-mRNA-1:cds;Parent=Msa0382590-mRNA-1 |
chr3_1 | three_prime_UTR | 85229526 | 85229781 | 85229526 | ID=Msa0382590-mRNA-1:three_prime_utr;Parent=Msa0382590-mRNA-1 |
Gene Sequence |
Protein sequence |