Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206760 | XP_003608666.1 | 98.319 | 357 | 6 | 0 | 1 | 357 | 1 | 357 | 0.0 | 731 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206760 | sp|Q8L7W2|NUDT8_ARATH | 59.392 | 362 | 131 | 5 | 9 | 354 | 2 | 363 | 1.50e-151 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020630 | Msa1206760 | 0.802774 | 4.782937e-49 | -8.615850e-47 |
| Msa0044180 | Msa1206760 | 0.803356 | 3.624439e-49 | -8.615850e-47 |
| Msa0044710 | Msa1206760 | 0.802524 | 5.385358e-49 | -8.615850e-47 |
| Msa0064550 | Msa1206760 | 0.822669 | 2.093275e-53 | -8.615850e-47 |
| Msa0068410 | Msa1206760 | 0.801199 | 1.007976e-48 | -8.615850e-47 |
| Msa0086090 | Msa1206760 | 0.802367 | 5.803217e-49 | -8.615850e-47 |
| Msa0104360 | Msa1206760 | 0.814292 | 1.659129e-51 | -8.615850e-47 |
| Msa0109490 | Msa1206760 | 0.812976 | 3.233150e-51 | -8.615850e-47 |
| Msa0605250 | Msa1206760 | 0.814779 | 1.294500e-51 | -8.615850e-47 |
| Msa0650650 | Msa1206760 | 0.802249 | 6.137435e-49 | -8.615850e-47 |
| Msa0650740 | Msa1206760 | 0.800384 | 1.477849e-48 | -8.615850e-47 |
| Msa0651400 | Msa1206760 | 0.820697 | 5.980275e-53 | -8.615850e-47 |
| Msa0665150 | Msa1206760 | 0.803860 | 2.848831e-49 | -8.615850e-47 |
| Msa0675010 | Msa1206760 | 0.806633 | 7.482516e-50 | -8.615850e-47 |
| Msa0688110 | Msa1206760 | 0.821821 | 3.292420e-53 | -8.615850e-47 |
| Msa0755090 | Msa1206760 | 0.819822 | 9.491823e-53 | -8.615850e-47 |
| Msa0761640 | Msa1206760 | 0.828924 | 6.860660e-55 | -8.615850e-47 |
| Msa0797000 | Msa1206760 | 0.812775 | 3.577989e-51 | -8.615850e-47 |
| Msa0812970 | Msa1206760 | 0.801128 | 1.042254e-48 | -8.615850e-47 |
| Msa0828570 | Msa1206760 | 0.842689 | 2.218035e-58 | -8.615850e-47 |
| Msa0834460 | Msa1206760 | 0.813004 | 3.187739e-51 | -8.615850e-47 |
| Msa0842050 | Msa1206760 | 0.801922 | 7.162581e-49 | -8.615850e-47 |
| Msa0153440 | Msa1206760 | 0.810730 | 9.966650e-51 | -8.615850e-47 |
| Msa0154240 | Msa1206760 | 0.823303 | 1.489352e-53 | -8.615850e-47 |
| Msa0154270 | Msa1206760 | 0.808224 | 3.440002e-50 | -8.615850e-47 |
| Msa0155610 | Msa1206760 | 0.802111 | 6.551650e-49 | -8.615850e-47 |
| Msa0182930 | Msa1206760 | 0.802084 | 6.636008e-49 | -8.615850e-47 |
| Msa0202740 | Msa1206760 | 0.805705 | 1.173131e-49 | -8.615850e-47 |
| Msa0223100 | Msa1206760 | 0.801887 | 7.284400e-49 | -8.615850e-47 |
| Msa0223290 | Msa1206760 | 0.806198 | 9.241005e-50 | -8.615850e-47 |
| Msa0377280 | Msa1206760 | 0.818261 | 2.149400e-52 | -8.615850e-47 |
| Msa0379340 | Msa1206760 | -0.816141 | 6.444000e-52 | -8.615850e-47 |
| Msa0389060 | Msa1206760 | 0.821381 | 4.162100e-53 | -8.615850e-47 |
| Msa0392050 | Msa1206760 | 0.802447 | 5.586066e-49 | -8.615850e-47 |
| Msa0401340 | Msa1206760 | 0.835219 | 1.906410e-56 | -8.615850e-47 |
| Msa0404690 | Msa1206760 | 0.818109 | 2.326240e-52 | -8.615850e-47 |
| Msa0428850 | Msa1206760 | -0.818302 | 2.104024e-52 | -8.615850e-47 |
| Msa0448080 | Msa1206760 | 0.812955 | 3.266865e-51 | -8.615850e-47 |
| Msa0448120 | Msa1206760 | 0.845098 | 5.019252e-59 | -8.615850e-47 |
| Msa0462590 | Msa1206760 | 0.809865 | 1.531730e-50 | -8.615850e-47 |
| Msa0469950 | Msa1206760 | 0.802075 | 6.663371e-49 | -8.615850e-47 |
| Msa0984000 | Msa1206760 | 0.827282 | 1.705215e-54 | -8.615850e-47 |
| Msa1004210 | Msa1206760 | 0.821090 | 4.856672e-53 | -8.615850e-47 |
| Msa1046610 | Msa1206760 | 0.815956 | 7.085210e-52 | -8.615850e-47 |
| Msa1082150 | Msa1206760 | 0.811361 | 7.274560e-51 | -8.615850e-47 |
| Msa1093390 | Msa1206760 | 0.800605 | 1.332692e-48 | -8.615850e-47 |
| Msa0302990 | Msa1206760 | -0.800555 | 1.364111e-48 | -8.615850e-47 |
| Msa0308570 | Msa1206760 | 0.818167 | 2.257155e-52 | -8.615850e-47 |
| Msa0326670 | Msa1206760 | 0.801962 | 7.029437e-49 | -8.615850e-47 |
| Msa0354390 | Msa1206760 | 0.819875 | 9.228769e-53 | -8.615850e-47 |
| Msa1138450 | Msa1206760 | 0.816687 | 4.863804e-52 | -8.615850e-47 |
| Msa1144730 | Msa1206760 | 0.803016 | 4.262573e-49 | -8.615850e-47 |
| Msa1151820 | Msa1206760 | 0.805999 | 1.017700e-49 | -8.615850e-47 |
| Msa1173380 | Msa1206760 | 0.802460 | 5.550993e-49 | -8.615850e-47 |
| Msa1182800 | Msa1206760 | 0.815892 | 7.322286e-52 | -8.615850e-47 |
| Msa1182830 | Msa1206760 | 0.871628 | 5.912037e-67 | -8.615850e-47 |
| Msa1205010 | Msa1206760 | -0.802387 | 5.747339e-49 | -8.615850e-47 |
| Msa1206760 | Msa1206830 | 0.906464 | 1.443706e-80 | -8.615850e-47 |
| Msa1206760 | Msa1209020 | 0.833812 | 4.301048e-56 | -8.615850e-47 |
| Msa1206760 | Msa1219370 | 0.818276 | 2.132820e-52 | -8.615850e-47 |
| Msa1206760 | Msa1241820 | 0.826956 | 2.040780e-54 | -8.615850e-47 |
| Msa1206760 | Msa1257100 | 0.836529 | 8.869965e-57 | -8.615850e-47 |
| Msa1206760 | Msa1266840 | 0.805324 | 1.410709e-49 | -8.615850e-47 |
| Msa1206760 | Msa1272950 | 0.836512 | 8.958168e-57 | -8.615850e-47 |
| Msa1206760 | Msa1282920 | 0.804938 | 1.698831e-49 | -8.615850e-47 |
| Msa1206760 | Msa1317710 | 0.810069 | 1.384616e-50 | -8.615850e-47 |
| Msa1206760 | Msa1349810 | 0.808510 | 2.989267e-50 | -8.615850e-47 |
| Msa1206760 | Msa1395750 | 0.835775 | 1.378541e-56 | -8.615850e-47 |
| Msa1206760 | Msa1406990 | 0.838516 | 2.745033e-57 | -8.615850e-47 |
| Msa1206760 | Msa1450980 | 0.804004 | 2.660275e-49 | -8.615850e-47 |
| Msa1206760 | Msa1460310 | -0.800475 | 1.416697e-48 | -8.615850e-47 |
| Msa1206760 | Msa1463560 | -0.801351 | 9.383221e-49 | -8.615850e-47 |
| Msa0514330 | Msa1206760 | -0.804866 | 1.758340e-49 | -8.615850e-47 |
| Msa0530380 | Msa1206760 | 0.847971 | 8.248653e-60 | -8.615850e-47 |
| Msa0579340 | Msa1206760 | 0.812829 | 3.482281e-51 | -8.615850e-47 |
| Msa0584280 | Msa1206760 | 0.801059 | 1.076345e-48 | -8.615850e-47 |
| Msa0938420 | Msa1206760 | 0.814756 | 1.310387e-51 | -8.615850e-47 |
| Msa0964680 | Msa1206760 | 0.818915 | 1.527700e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206760 | MtrunA17_Chr4g0055811 | 98.319 | 357 | 6 | 0 | 1 | 357 | 1 | 357 | 0.0 | 731 |
| Msa1206760 | MtrunA17_Chr2g0290501 | 47.122 | 278 | 146 | 1 | 76 | 353 | 56 | 332 | 3.50e-92 | 279 |
| Msa1206760 | MtrunA17_Chr3g0102431 | 50.775 | 258 | 126 | 1 | 91 | 348 | 25 | 281 | 3.84e-89 | 269 |
| Msa1206760 | MtrunA17_Chr3g0120821 | 44.218 | 294 | 140 | 4 | 37 | 328 | 45 | 316 | 2.37e-86 | 264 |
| Msa1206760 | MtrunA17_Chr4g0076351 | 48.235 | 255 | 131 | 1 | 91 | 344 | 12 | 266 | 1.77e-85 | 259 |
| Msa1206760 | MtrunA17_Chr8g0383231 | 50.198 | 253 | 124 | 2 | 96 | 348 | 23 | 273 | 6.99e-84 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206760 | AT5G47240.1 | 59.392 | 362 | 131 | 5 | 9 | 354 | 2 | 363 | 1.53e-152 | 434 |
| Msa1206760 | AT5G47240.2 | 54.987 | 391 | 131 | 6 | 9 | 354 | 2 | 392 | 1.70e-145 | 417 |
| Msa1206760 | AT4G25434.10 | 48.627 | 255 | 130 | 1 | 91 | 345 | 19 | 272 | 1.26e-85 | 261 |
| Msa1206760 | AT5G47650.5 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.76e-85 | 259 |
| Msa1206760 | AT5G47650.3 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.76e-85 | 259 |
| Msa1206760 | AT5G47650.1 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.76e-85 | 259 |
| Msa1206760 | AT5G47650.2 | 49.225 | 258 | 128 | 2 | 91 | 348 | 66 | 320 | 1.72e-84 | 259 |
| Msa1206760 | AT5G47650.4 | 49.225 | 258 | 128 | 2 | 91 | 348 | 65 | 319 | 1.72e-84 | 259 |
| Msa1206760 | AT4G25434.1 | 47.059 | 255 | 129 | 2 | 91 | 345 | 19 | 267 | 2.14e-80 | 247 |
| Msa1206760 | AT4G25434.8 | 43.972 | 282 | 130 | 2 | 91 | 345 | 19 | 299 | 5.44e-80 | 247 |
| Msa1206760 | AT2G04430.2 | 48.750 | 240 | 119 | 3 | 91 | 326 | 10 | 249 | 1.27e-74 | 233 |
| Msa1206760 | AT4G25434.2 | 42.553 | 282 | 129 | 3 | 91 | 345 | 19 | 294 | 1.48e-74 | 233 |
| Msa1206760 | AT2G04430.1 | 48.750 | 240 | 119 | 3 | 91 | 326 | 29 | 268 | 2.71e-74 | 232 |
| Msa1206760 | AT4G25434.7 | 53.266 | 199 | 92 | 1 | 91 | 289 | 19 | 216 | 2.76e-73 | 227 |
| Msa1206760 | AT4G12720.2 | 46.124 | 258 | 135 | 4 | 91 | 346 | 10 | 265 | 4.41e-72 | 226 |
| Msa1206760 | AT4G12720.3 | 46.124 | 258 | 135 | 4 | 91 | 346 | 10 | 265 | 4.41e-72 | 226 |
| Msa1206760 | AT4G12720.1 | 46.124 | 258 | 135 | 4 | 91 | 346 | 10 | 265 | 4.41e-72 | 226 |
| Msa1206760 | AT4G25434.3 | 50.761 | 197 | 97 | 0 | 149 | 345 | 31 | 227 | 3.18e-68 | 214 |
| Msa1206760 | AT4G25434.5 | 50.761 | 197 | 97 | 0 | 149 | 345 | 31 | 227 | 3.18e-68 | 214 |
| Msa1206760 | AT4G25434.9 | 51.256 | 199 | 91 | 2 | 91 | 289 | 19 | 211 | 7.40e-68 | 213 |
| Msa1206760 | AT4G25434.6 | 46.903 | 226 | 92 | 2 | 91 | 289 | 19 | 243 | 1.13e-67 | 213 |
| Msa1206760 | AT2G04450.1 | 44.656 | 262 | 140 | 5 | 88 | 346 | 7 | 266 | 1.55e-66 | 212 |
| Msa1206760 | AT4G12720.4 | 40.067 | 297 | 134 | 5 | 91 | 345 | 10 | 304 | 4.61e-64 | 207 |
| Msa1206760 | AT4G25434.4 | 48.731 | 197 | 96 | 1 | 149 | 345 | 31 | 222 | 9.39e-63 | 200 |
| Msa1206760 | AT4G12720.5 | 50.746 | 201 | 96 | 3 | 91 | 289 | 10 | 209 | 1.98e-61 | 196 |
| Msa1206760 | AT4G25434.12 | 53.704 | 162 | 74 | 1 | 91 | 252 | 19 | 179 | 1.02e-58 | 190 |
| Msa1206760 | AT4G25434.13 | 43.478 | 207 | 90 | 1 | 166 | 345 | 1 | 207 | 2.68e-53 | 175 |
| Msa1206760 | AT4G25434.11 | 46.032 | 189 | 74 | 2 | 91 | 252 | 19 | 206 | 3.92e-53 | 176 |
| Msa1206760 | AT4G12720.6 | 46.154 | 182 | 95 | 3 | 166 | 345 | 1 | 181 | 3.04e-46 | 156 |
| Msa1206760 | AT2G04440.1 | 47.826 | 138 | 71 | 1 | 91 | 227 | 10 | 147 | 1.33e-37 | 134 |
Find 92 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATGGAATCTTCTTGTATT+AGG | 0.158105 | 8_1:-63843790 | None:intergenic |
| ACAAGTTCCCATTGTATTAA+TGG | 0.183525 | 8_1:+63841751 | Msa1206760:CDS |
| ATTATCACCTTGTGCCTAAT+TGG | 0.239677 | 8_1:+63840978 | None:intergenic |
| TAGTAGTATATTTGCATATC+TGG | 0.244040 | 8_1:+63841179 | Msa1206760:five_prime_UTR |
| CATGGAATCTTCTTGTATTA+GGG | 0.250141 | 8_1:-63843789 | None:intergenic |
| TGCCTCAGATGACACTTATT+TGG | 0.255967 | 8_1:+63841687 | Msa1206760:CDS |
| TGCAGGGAAAGAAGGGAATT+TGG | 0.271776 | 8_1:+63842002 | Msa1206760:intron |
| GGATTGTGTGGTAACCTATT+TGG | 0.272788 | 8_1:-63841850 | None:intergenic |
| GATATGTGATGTTAACTTAC+TGG | 0.280931 | 8_1:+63842634 | Msa1206760:CDS |
| CTCCTGCAACTCTTGGCCTT+TGG | 0.301775 | 8_1:+63842900 | Msa1206760:CDS |
| TTCCAAAGGCCAAGAGTTGC+AGG | 0.325763 | 8_1:-63842902 | None:intergenic |
| TAAATTACCTTGACAGCAAC+TGG | 0.331130 | 8_1:-63842058 | None:intergenic |
| AGAGAAGTGAAGGAAGAAAC+TGG | 0.340232 | 8_1:+63843313 | Msa1206760:CDS |
| TTGTTGAAGTCATAGCATTC+AGG | 0.346192 | 8_1:+63843493 | Msa1206760:CDS |
| TTGAAATTGAAGGAGCAAAA+TGG | 0.347302 | 8_1:+63843738 | Msa1206760:CDS |
| TTCAAATGTGGACAAAGAAT+TGG | 0.348986 | 8_1:-63841278 | None:intergenic |
| GTCAAAGACATTATAGTATA+GGG | 0.352247 | 8_1:-63843912 | None:intergenic |
| CAAGTAGTTTCCAAGTTTGA+TGG | 0.355833 | 8_1:+63843878 | Msa1206760:CDS |
| ATTGCACTTGTTCCTCATTT+CGG | 0.363268 | 8_1:+63844120 | Msa1206760:three_prime_UTR |
| GGAAGCATGCAAGGTCCTTC+AGG | 0.363281 | 8_1:-63842660 | None:intergenic |
| TGTCAAAGACATTATAGTAT+AGG | 0.374450 | 8_1:-63843913 | None:intergenic |
| ACAAGATCAGATTGCTCTAT+AGG | 0.380012 | 8_1:-63842034 | None:intergenic |
| GGATTCTCATTGATCCAAAT+AGG | 0.382227 | 8_1:+63841836 | Msa1206760:CDS |
| ACTGTGTTGGAAAATAATTT+AGG | 0.384026 | 8_1:+63843948 | Msa1206760:exon |
| CATTGTTCTCCTGCAACTCT+TGG | 0.398283 | 8_1:+63842893 | Msa1206760:CDS |
| AGCATAGATGCAAAGGCATA+TGG | 0.400461 | 8_1:-63841871 | None:intergenic |
| AAAATCTAGATAATCCAATT+AGG | 0.407187 | 8_1:-63840992 | None:intergenic |
| ACTTGATGTGATGCATTTGC+TGG | 0.407708 | 8_1:-63842681 | None:intergenic |
| GATATCTTTATTGCTCGTCT+TGG | 0.413439 | 8_1:+63843827 | Msa1206760:CDS |
| GATGCCTTTGATGATGAGTA+TGG | 0.416511 | 8_1:+63841811 | Msa1206760:CDS |
| ATATCTTTATTGCTCGTCTT+GGG | 0.440305 | 8_1:+63843828 | Msa1206760:CDS |
| GGCCTTTGGAAAATACCAAC+TGG | 0.454871 | 8_1:+63842914 | Msa1206760:CDS |
| CAATACCACCATGCAGAGCC+AGG | 0.462871 | 8_1:+63842612 | Msa1206760:CDS |
| ACTTGTTCCTCATTTCGGTT+TGG | 0.469207 | 8_1:+63844125 | Msa1206760:three_prime_UTR |
| AGTTGATCCATTAATACAAT+GGG | 0.469605 | 8_1:-63841758 | None:intergenic |
| TCTTTGTCCACATTTGAAGT+TGG | 0.473737 | 8_1:+63841283 | Msa1206760:CDS |
| CAGGCAGAGGAGATTTATAC+AGG | 0.482585 | 8_1:+63843283 | Msa1206760:intron |
| TCTGGATTGTGATCTCTCAT+TGG | 0.490334 | 8_1:+63841197 | Msa1206760:five_prime_UTR |
| TAAGTTAACATCACATATCC+TGG | 0.491360 | 8_1:-63842630 | None:intergenic |
| GCATCACATCAAGTCGGAAT+CGG | 0.491928 | 8_1:+63842690 | Msa1206760:CDS |
| GGACATCAATAGTAGTGTAT+TGG | 0.497750 | 8_1:-63843989 | None:intergenic |
| GAGAATCTTCACTAAAATCA+AGG | 0.504165 | 8_1:-63841135 | None:intergenic |
| TTTGTCTATCTCTTTCTCAC+TGG | 0.506534 | 8_1:+63841893 | Msa1206760:CDS |
| GTGGATGATCTTGAAATTGA+AGG | 0.507225 | 8_1:+63843728 | Msa1206760:CDS |
| TCTTGTTCCAGTTGCTGTCA+AGG | 0.509061 | 8_1:+63842051 | Msa1206760:CDS |
| TGTGATCTCTCATTGGAGAC+TGG | 0.514900 | 8_1:+63841204 | Msa1206760:five_prime_UTR |
| GAGAAGTGAAGGAAGAAACT+GGG | 0.516226 | 8_1:+63843314 | Msa1206760:CDS |
| CTACTTTCCAAACCGAAATG+AGG | 0.516325 | 8_1:-63844132 | None:intergenic |
| AGGAGCTGTAAGAGAAGTGA+AGG | 0.519985 | 8_1:+63843303 | Msa1206760:CDS |
| ATATCAATAAAGAGTTGCTA+TGG | 0.528372 | 8_1:+63844084 | Msa1206760:three_prime_UTR |
| CTCATTGGAGACTGGAATTG+TGG | 0.534912 | 8_1:+63841212 | Msa1206760:five_prime_UTR |
| TTATATGTTACATATTCTAC+CGG | 0.542353 | 8_1:-63844010 | None:intergenic |
| AAGTTGATCCATTAATACAA+TGG | 0.544572 | 8_1:-63841759 | None:intergenic |
| TGATTCAATAAATTACAAGA+TGG | 0.551238 | 8_1:-63844185 | None:intergenic |
| GAATATGTAACATATAATTG+AGG | 0.554318 | 8_1:+63844016 | Msa1206760:three_prime_UTR |
| ATCTACAATCTTCTTGAACA+TGG | 0.556041 | 8_1:-63843807 | None:intergenic |
| TTCAATAAATTACAAGATGG+AGG | 0.558417 | 8_1:-63844182 | None:intergenic |
| ATGGAATCTTCTTGTATTAG+GGG | 0.559760 | 8_1:-63843788 | None:intergenic |
| TCTTTCTCACTGGAAAAGAA+TGG | 0.560278 | 8_1:+63841903 | Msa1206760:CDS |
| CGTCTTGGGAAACGTTATTG+TGG | 0.560922 | 8_1:+63843842 | Msa1206760:CDS |
| AAGAGTTGCTATGGAACATG+AGG | 0.567194 | 8_1:+63844093 | Msa1206760:three_prime_UTR |
| AATGATGATTCCAACTGTGT+TGG | 0.569974 | 8_1:+63843935 | Msa1206760:CDS |
| CCCTCCATACTCATCATCAA+AGG | 0.576216 | 8_1:-63841815 | None:intergenic |
| ACCTCATGAATGAATCCAGT+TGG | 0.579034 | 8_1:-63842929 | None:intergenic |
| TAGACAAAGCATAGATGCAA+AGG | 0.579845 | 8_1:-63841878 | None:intergenic |
| ATTTGACTAAAGAAACATCA+TGG | 0.581883 | 8_1:-63841088 | None:intergenic |
| CAAATTTGTAAAGGTGCTTG+TGG | 0.584011 | 8_1:+63842859 | Msa1206760:intron |
| GCATTTGCTGGAAGCATGCA+AGG | 0.587186 | 8_1:-63842669 | None:intergenic |
| TCACATATCCTGGCTCTGCA+TGG | 0.590682 | 8_1:-63842620 | None:intergenic |
| AATACACTACTATTGATGTC+CGG | 0.596781 | 8_1:+63843991 | Msa1206760:three_prime_UTR |
| TTAACTTACTGGATTCCTGA+AGG | 0.599287 | 8_1:+63842645 | Msa1206760:CDS |
| AGAAGTGAAGGAAGAAACTG+GGG | 0.603388 | 8_1:+63843315 | Msa1206760:CDS |
| AATAGTGTCAGTGATCAAGA+TGG | 0.609789 | 8_1:+63841237 | Msa1206760:exon |
| TCACATCAAGTCGGAATCGG+AGG | 0.616036 | 8_1:+63842693 | Msa1206760:CDS |
| ATATAGTTCGATACATGCTA+AGG | 0.616553 | 8_1:+63841109 | Msa1206760:five_prime_UTR |
| CCTAAAACTTGTGAACAAAG+TGG | 0.620183 | 8_1:-63841317 | None:intergenic |
| CCTTTGATGATGAGTATGGA+GGG | 0.620814 | 8_1:+63841815 | Msa1206760:CDS |
| ACAGTGATCGTAGATGATAG+TGG | 0.623914 | 8_1:-63843707 | None:intergenic |
| CCTCAGTTCAAGTGCCGCAG+AGG | 0.632039 | 8_1:+63841364 | Msa1206760:CDS |
| TGCTCTACAAACTCAACCAG+TGG | 0.635102 | 8_1:-63843764 | None:intergenic |
| GCAAATATACTACTATGTGA+CGG | 0.641189 | 8_1:-63841171 | None:intergenic |
| AGGAGCAAAATGGATGCCAC+TGG | 0.654186 | 8_1:+63843748 | Msa1206760:CDS |
| CATATCCTGGCTCTGCATGG+TGG | 0.655970 | 8_1:-63842617 | None:intergenic |
| TTCTAGGCATGTACACAATG+TGG | 0.663546 | 8_1:+63843643 | Msa1206760:intron |
| GCAAATGCATCACATCAAGT+CGG | 0.666360 | 8_1:+63842684 | Msa1206760:CDS |
| GCCTTTGATGATGAGTATGG+AGG | 0.668533 | 8_1:+63841814 | Msa1206760:CDS |
| AGAGTTGCTATGGAACATGA+GGG | 0.669158 | 8_1:+63844094 | Msa1206760:three_prime_UTR |
| ACCAACTGGATTCATTCATG+AGG | 0.669787 | 8_1:+63842928 | Msa1206760:CDS |
| TGCCAAATAAGTGTCATCTG+AGG | 0.672505 | 8_1:-63841689 | None:intergenic |
| GCAAAGGCATATGGATTGTG+TGG | 0.674954 | 8_1:-63841862 | None:intergenic |
| AGTGTCAGTGATCAAGATGG+AGG | 0.679988 | 8_1:+63841240 | Msa1206760:exon |
| ACTATCATCTACGATCACTG+TGG | 0.741537 | 8_1:+63843709 | Msa1206760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTCTTCTATTTGTT+GGG | + | chr8_1:63842333-63842352 | Msa1206760:intron | 15.0% |
| !!! | CTTTATTTTATTCAATCTTA+TGG | + | chr8_1:63843098-63843117 | Msa1206760:intron | 15.0% |
| !! | CAATTTATGTTTAAATACTA+CGG | + | chr8_1:63843132-63843151 | Msa1206760:intron | 15.0% |
| !! | ACATAATAACATTACATAAA+TGG | - | chr8_1:63843229-63843248 | None:intergenic | 15.0% |
| !! | AAAAATTGAACTTATTCATA+AGG | + | chr8_1:63843389-63843408 | Msa1206760:intron | 15.0% |
| !! | AAAATCTAGATAATCCAATT+AGG | - | chr8_1:63840995-63841014 | None:intergenic | 20.0% |
| !! | AGCTGATATTTGAATTTAAT+TGG | + | chr8_1:63841572-63841591 | Msa1206760:intron | 20.0% |
| !!! | AGTTTATCATCTTTAATTTC+AGG | + | chr8_1:63841643-63841662 | Msa1206760:intron | 20.0% |
| !!! | GTTTATCATCTTTAATTTCA+GGG | + | chr8_1:63841644-63841663 | Msa1206760:intron | 20.0% |
| !!! | TAACTTGTAATTACGTTAAA+CGG | - | chr8_1:63842193-63842212 | None:intergenic | 20.0% |
| !! | TTGGTTATATTAATTGTCTT+AGG | + | chr8_1:63842231-63842250 | Msa1206760:intron | 20.0% |
| !! | CAATTTATTCTTCTATTTGT+TGG | + | chr8_1:63842332-63842351 | Msa1206760:intron | 20.0% |
| !! | TTCTTCTAACAAATTTGTAA+AGG | + | chr8_1:63842850-63842869 | Msa1206760:intron | 20.0% |
| !!! | TTTTATTTGCATCAAAACTT+AGG | - | chr8_1:63843367-63843386 | None:intergenic | 20.0% |
| !! | TTGTATTAATGTATATTCAC+AGG | - | chr8_1:63843589-63843608 | None:intergenic | 20.0% |
| !! | AGAACTTTATGATAAATTCT+AGG | + | chr8_1:63843627-63843646 | Msa1206760:intron | 20.0% |
| !! | TTATATGTTACATATTCTAC+CGG | - | chr8_1:63844013-63844032 | None:intergenic | 20.0% |
| !! | GAATATGTAACATATAATTG+AGG | + | chr8_1:63844016-63844035 | Msa1206760:three_prime_UTR | 20.0% |
| !! | TGATTCAATAAATTACAAGA+TGG | - | chr8_1:63844188-63844207 | None:intergenic | 20.0% |
| ! | ATTTGACTAAAGAAACATCA+TGG | - | chr8_1:63841091-63841110 | None:intergenic | 25.0% |
| ! | TAGTAGTATATTTGCATATC+TGG | + | chr8_1:63841179-63841198 | Msa1206760:five_prime_UTR | 25.0% |
| !! | AAATTTTCCAACTTCAAATG+TGG | - | chr8_1:63841293-63841312 | None:intergenic | 25.0% |
| ! | AGCTTATATGAGAATCTAAT+TGG | - | chr8_1:63841401-63841420 | None:intergenic | 25.0% |
| !! | TTGCATAAAATCTAAAGTCA+TGG | + | chr8_1:63841440-63841459 | Msa1206760:intron | 25.0% |
| !! | ATCTAAAGTCATGGTTAATA+TGG | + | chr8_1:63841449-63841468 | Msa1206760:intron | 25.0% |
| ! | ACTAAAATGTTAAGAGAATG+TGG | + | chr8_1:63841606-63841625 | Msa1206760:intron | 25.0% |
| ! | AGTTGATCCATTAATACAAT+GGG | - | chr8_1:63841761-63841780 | None:intergenic | 25.0% |
| !! | AAGTTGATCCATTAATACAA+TGG | - | chr8_1:63841762-63841781 | None:intergenic | 25.0% |
| ! | ATTGAAAACCTAACATTATG+AGG | + | chr8_1:63841976-63841995 | Msa1206760:intron | 25.0% |
| ! | TTCTTTAGTAATAGAAATGC+AGG | - | chr8_1:63842088-63842107 | None:intergenic | 25.0% |
| ! | CAAATATCATTGTGTGATTT+AGG | - | chr8_1:63842150-63842169 | None:intergenic | 25.0% |
| ! | ACAAACATTGTTGAAAACTA+TGG | - | chr8_1:63842364-63842383 | None:intergenic | 25.0% |
| ! | ACAATGTTTGTAAAGCAAAA+AGG | + | chr8_1:63842373-63842392 | Msa1206760:intron | 25.0% |
| ! | GTCAAAGACATTATAGTATA+GGG | - | chr8_1:63843915-63843934 | None:intergenic | 25.0% |
| ! | TGTCAAAGACATTATAGTAT+AGG | - | chr8_1:63843916-63843935 | None:intergenic | 25.0% |
| !! | AAATTATTTTCCAACACAGT+TGG | - | chr8_1:63843948-63843967 | None:intergenic | 25.0% |
| ! | ACTGTGTTGGAAAATAATTT+AGG | + | chr8_1:63843948-63843967 | Msa1206760:exon | 25.0% |
| ! | ATATCAATAAAGAGTTGCTA+TGG | + | chr8_1:63844084-63844103 | Msa1206760:three_prime_UTR | 25.0% |
| ! | TTCAATAAATTACAAGATGG+AGG | - | chr8_1:63844185-63844204 | None:intergenic | 25.0% |
| ATATAGTTCGATACATGCTA+AGG | + | chr8_1:63841109-63841128 | Msa1206760:five_prime_UTR | 30.0% | |
| GAGAATCTTCACTAAAATCA+AGG | - | chr8_1:63841138-63841157 | None:intergenic | 30.0% | |
| GCAAATATACTACTATGTGA+CGG | - | chr8_1:63841174-63841193 | None:intergenic | 30.0% | |
| TTCAAATGTGGACAAAGAAT+TGG | - | chr8_1:63841281-63841300 | None:intergenic | 30.0% | |
| !!! | ACAAGTTTTAGGCACAAATT+TGG | + | chr8_1:63841328-63841347 | Msa1206760:CDS | 30.0% |
| GACTAAACTCCTTATTATCA+GGG | - | chr8_1:63841518-63841537 | None:intergenic | 30.0% | |
| AGACTAAACTCCTTATTATC+AGG | - | chr8_1:63841519-63841538 | None:intergenic | 30.0% | |
| ACAAGTTCCCATTGTATTAA+TGG | + | chr8_1:63841751-63841770 | Msa1206760:CDS | 30.0% | |
| TTTCACAAGGATAATACACA+TGG | - | chr8_1:63841942-63841961 | None:intergenic | 30.0% | |
| ! | ATGTTAGGTTTTCAATATGC+TGG | - | chr8_1:63841972-63841991 | None:intergenic | 30.0% |
| ! | TAACATTATGAGGTTTTGCA+GGG | + | chr8_1:63841986-63842005 | Msa1206760:intron | 30.0% |
| ! | AGTTATGATTAGTTGCATGT+TGG | + | chr8_1:63842212-63842231 | Msa1206760:intron | 30.0% |
| AATGTATAAAGTGTATCCTG+CGG | + | chr8_1:63842257-63842276 | Msa1206760:intron | 30.0% | |
| TTTACTAGTTGAAGAGTTGT+TGG | + | chr8_1:63842546-63842565 | Msa1206760:intron | 30.0% | |
| TAAGTTAACATCACATATCC+TGG | - | chr8_1:63842633-63842652 | None:intergenic | 30.0% | |
| GATATGTGATGTTAACTTAC+TGG | + | chr8_1:63842634-63842653 | Msa1206760:CDS | 30.0% | |
| ! | TCTCTAGTTTAGCTTATGTT+GGG | - | chr8_1:63843188-63843207 | None:intergenic | 30.0% |
| ! | ATCTCTAGTTTAGCTTATGT+TGG | - | chr8_1:63843189-63843208 | None:intergenic | 30.0% |
| TATTCATAAGGTTGCATGAT+AGG | + | chr8_1:63843401-63843420 | Msa1206760:intron | 30.0% | |
| ! | GAATTTCTTGATGACATGAT+TGG | - | chr8_1:63843524-63843543 | None:intergenic | 30.0% |
| TTGAAATTGAAGGAGCAAAA+TGG | + | chr8_1:63843738-63843757 | Msa1206760:CDS | 30.0% | |
| ATGGAATCTTCTTGTATTAG+GGG | - | chr8_1:63843791-63843810 | None:intergenic | 30.0% | |
| CATGGAATCTTCTTGTATTA+GGG | - | chr8_1:63843792-63843811 | None:intergenic | 30.0% | |
| ACATGGAATCTTCTTGTATT+AGG | - | chr8_1:63843793-63843812 | None:intergenic | 30.0% | |
| ATCTACAATCTTCTTGAACA+TGG | - | chr8_1:63843810-63843829 | None:intergenic | 30.0% | |
| ATATCTTTATTGCTCGTCTT+GGG | + | chr8_1:63843828-63843847 | Msa1206760:CDS | 30.0% | |
| ! | AGTAATTTTGCCATCAAACT+TGG | - | chr8_1:63843891-63843910 | None:intergenic | 30.0% |
| AATACACTACTATTGATGTC+CGG | + | chr8_1:63843991-63844010 | Msa1206760:three_prime_UTR | 30.0% | |
| AATAGTGTCAGTGATCAAGA+TGG | + | chr8_1:63841237-63841256 | Msa1206760:exon | 35.0% | |
| ! | TCTTTGTCCACATTTGAAGT+TGG | + | chr8_1:63841283-63841302 | Msa1206760:CDS | 35.0% |
| CCTAAAACTTGTGAACAAAG+TGG | - | chr8_1:63841320-63841339 | None:intergenic | 35.0% | |
| ! | CCACTTTGTTCACAAGTTTT+AGG | + | chr8_1:63841317-63841336 | Msa1206760:CDS | 35.0% |
| TAATAAGGAGTTTAGTCTCG+AGG | + | chr8_1:63841521-63841540 | Msa1206760:intron | 35.0% | |
| TGTTAAGAGAATGTGGAACA+TGG | + | chr8_1:63841613-63841632 | Msa1206760:intron | 35.0% | |
| GTTAAGAGAATGTGGAACAT+GGG | + | chr8_1:63841614-63841633 | Msa1206760:intron | 35.0% | |
| GGATTCTCATTGATCCAAAT+AGG | + | chr8_1:63841836-63841855 | Msa1206760:CDS | 35.0% | |
| TAGACAAAGCATAGATGCAA+AGG | - | chr8_1:63841881-63841900 | None:intergenic | 35.0% | |
| TTTGTCTATCTCTTTCTCAC+TGG | + | chr8_1:63841893-63841912 | Msa1206760:CDS | 35.0% | |
| TCTTTCTCACTGGAAAAGAA+TGG | + | chr8_1:63841903-63841922 | Msa1206760:CDS | 35.0% | |
| CTGCAAAACCTCATAATGTT+AGG | - | chr8_1:63841987-63842006 | None:intergenic | 35.0% | |
| ! | CTAACATTATGAGGTTTTGC+AGG | + | chr8_1:63841985-63842004 | Msa1206760:intron | 35.0% |
| ACAAGATCAGATTGCTCTAT+AGG | - | chr8_1:63842037-63842056 | None:intergenic | 35.0% | |
| TAAATTACCTTGACAGCAAC+TGG | - | chr8_1:63842061-63842080 | None:intergenic | 35.0% | |
| !!! | ATTGAACTTTTTTGCCAACG+CGG | - | chr8_1:63842402-63842421 | None:intergenic | 35.0% |
| ! | TGAGGTAACTAGACTCATTT+TGG | + | chr8_1:63842574-63842593 | Msa1206760:intron | 35.0% |
| TTAACTTACTGGATTCCTGA+AGG | + | chr8_1:63842645-63842664 | Msa1206760:CDS | 35.0% | |
| !! | CAAATTTGTAAAGGTGCTTG+TGG | + | chr8_1:63842859-63842878 | Msa1206760:intron | 35.0% |
| !! | ATCCAGTTGGTATTTTCCAA+AGG | - | chr8_1:63842919-63842938 | None:intergenic | 35.0% |
| GTATGCTCGTTAAACGAAAT+AGG | + | chr8_1:63842954-63842973 | Msa1206760:intron | 35.0% | |
| TTATGTTGGGTACAGTTTAG+GGG | - | chr8_1:63843175-63843194 | None:intergenic | 35.0% | |
| CTTATGTTGGGTACAGTTTA+GGG | - | chr8_1:63843176-63843195 | None:intergenic | 35.0% | |
| TTGTTGAAGTCATAGCATTC+AGG | + | chr8_1:63843493-63843512 | Msa1206760:CDS | 35.0% | |
| GTGGATGATCTTGAAATTGA+AGG | + | chr8_1:63843728-63843747 | Msa1206760:CDS | 35.0% | |
| GATATCTTTATTGCTCGTCT+TGG | + | chr8_1:63843827-63843846 | Msa1206760:CDS | 35.0% | |
| CAAGTAGTTTCCAAGTTTGA+TGG | + | chr8_1:63843878-63843897 | Msa1206760:CDS | 35.0% | |
| AATGATGATTCCAACTGTGT+TGG | + | chr8_1:63843935-63843954 | Msa1206760:CDS | 35.0% | |
| GGACATCAATAGTAGTGTAT+TGG | - | chr8_1:63843992-63844011 | None:intergenic | 35.0% | |
| ATTGCACTTGTTCCTCATTT+CGG | + | chr8_1:63844120-63844139 | Msa1206760:three_prime_UTR | 35.0% | |
| TCTGGATTGTGATCTCTCAT+TGG | + | chr8_1:63841197-63841216 | Msa1206760:five_prime_UTR | 40.0% | |
| !!! | TGGCTTTTTAGTTACCTCTG+CGG | - | chr8_1:63841381-63841400 | None:intergenic | 40.0% |
| TCATTAACTCTCCGATTCTC+AGG | + | chr8_1:63841485-63841504 | Msa1206760:intron | 40.0% | |
| CATTAACTCTCCGATTCTCA+GGG | + | chr8_1:63841486-63841505 | Msa1206760:intron | 40.0% | |
| GGGAAATGACCCTGATAATA+AGG | + | chr8_1:63841506-63841525 | Msa1206760:intron | 40.0% | |
| TGCCTCAGATGACACTTATT+TGG | + | chr8_1:63841687-63841706 | Msa1206760:CDS | 40.0% | |
| TGCCAAATAAGTGTCATCTG+AGG | - | chr8_1:63841692-63841711 | None:intergenic | 40.0% | |
| !! | GATGCCTTTGATGATGAGTA+TGG | + | chr8_1:63841811-63841830 | Msa1206760:CDS | 40.0% |
| !! | CCTTTGATGATGAGTATGGA+GGG | + | chr8_1:63841815-63841834 | Msa1206760:CDS | 40.0% |
| GGATTGTGTGGTAACCTATT+TGG | - | chr8_1:63841853-63841872 | None:intergenic | 40.0% | |
| ! | AGCATAGATGCAAAGGCATA+TGG | - | chr8_1:63841874-63841893 | None:intergenic | 40.0% |
| AAAACTTGATACATGACCGC+AGG | - | chr8_1:63842276-63842295 | None:intergenic | 40.0% | |
| GAAGAGTTGTTGGATCTATG+AGG | + | chr8_1:63842556-63842575 | Msa1206760:intron | 40.0% | |
| !! | ACTAGACTCATTTTGGTCTC+AGG | + | chr8_1:63842581-63842600 | Msa1206760:intron | 40.0% |
| ACTTGATGTGATGCATTTGC+TGG | - | chr8_1:63842684-63842703 | None:intergenic | 40.0% | |
| GCAAATGCATCACATCAAGT+CGG | + | chr8_1:63842684-63842703 | Msa1206760:CDS | 40.0% | |
| ACCAACTGGATTCATTCATG+AGG | + | chr8_1:63842928-63842947 | Msa1206760:CDS | 40.0% | |
| ACCTCATGAATGAATCCAGT+TGG | - | chr8_1:63842932-63842951 | None:intergenic | 40.0% | |
| ATCTGTTTCCCTTTGAACCA+GGG | - | chr8_1:63842998-63843017 | None:intergenic | 40.0% | |
| TTAGGGGAAATCGTGTAAAC+TGG | - | chr8_1:63843159-63843178 | None:intergenic | 40.0% | |
| GCTTATGTTGGGTACAGTTT+AGG | - | chr8_1:63843177-63843196 | None:intergenic | 40.0% | |
| AGAGAAGTGAAGGAAGAAAC+TGG | + | chr8_1:63843313-63843332 | Msa1206760:CDS | 40.0% | |
| GAGAAGTGAAGGAAGAAACT+GGG | + | chr8_1:63843314-63843333 | Msa1206760:CDS | 40.0% | |
| AGAAGTGAAGGAAGAAACTG+GGG | + | chr8_1:63843315-63843334 | Msa1206760:CDS | 40.0% | |
| TTCTAGGCATGTACACAATG+TGG | + | chr8_1:63843643-63843662 | Msa1206760:intron | 40.0% | |
| ACAGTGATCGTAGATGATAG+TGG | - | chr8_1:63843710-63843729 | None:intergenic | 40.0% | |
| ACTATCATCTACGATCACTG+TGG | + | chr8_1:63843709-63843728 | Msa1206760:CDS | 40.0% | |
| AAGAGTTGCTATGGAACATG+AGG | + | chr8_1:63844093-63844112 | Msa1206760:three_prime_UTR | 40.0% | |
| AGAGTTGCTATGGAACATGA+GGG | + | chr8_1:63844094-63844113 | Msa1206760:three_prime_UTR | 40.0% | |
| ACTTGTTCCTCATTTCGGTT+TGG | + | chr8_1:63844125-63844144 | Msa1206760:three_prime_UTR | 40.0% | |
| CTACTTTCCAAACCGAAATG+AGG | - | chr8_1:63844135-63844154 | None:intergenic | 40.0% | |
| TGTGATCTCTCATTGGAGAC+TGG | + | chr8_1:63841204-63841223 | Msa1206760:five_prime_UTR | 45.0% | |
| CTCATTGGAGACTGGAATTG+TGG | + | chr8_1:63841212-63841231 | Msa1206760:five_prime_UTR | 45.0% | |
| AGTGTCAGTGATCAAGATGG+AGG | + | chr8_1:63841240-63841259 | Msa1206760:exon | 45.0% | |
| AGGGTCATTTCCCTGAGAAT+CGG | - | chr8_1:63841499-63841518 | None:intergenic | 45.0% | |
| !! | GCCTTTGATGATGAGTATGG+AGG | + | chr8_1:63841814-63841833 | Msa1206760:CDS | 45.0% |
| CCCTCCATACTCATCATCAA+AGG | - | chr8_1:63841818-63841837 | None:intergenic | 45.0% | |
| ! | GCAAAGGCATATGGATTGTG+TGG | - | chr8_1:63841865-63841884 | None:intergenic | 45.0% |
| TGCTGGATGATGCTTTCACA+AGG | - | chr8_1:63841955-63841974 | None:intergenic | 45.0% | |
| ! | TGAGGTTTTGCAGGGAAAGA+AGG | + | chr8_1:63841994-63842013 | Msa1206760:intron | 45.0% |
| ! | GAGGTTTTGCAGGGAAAGAA+GGG | + | chr8_1:63841995-63842014 | Msa1206760:intron | 45.0% |
| TGCAGGGAAAGAAGGGAATT+TGG | + | chr8_1:63842002-63842021 | Msa1206760:intron | 45.0% | |
| TCTTGTTCCAGTTGCTGTCA+AGG | + | chr8_1:63842051-63842070 | Msa1206760:CDS | 45.0% | |
| !! | GACTCATTTTGGTCTCAGGA+AGG | + | chr8_1:63842585-63842604 | Msa1206760:intron | 45.0% |
| GCATCACATCAAGTCGGAAT+CGG | + | chr8_1:63842690-63842709 | Msa1206760:CDS | 45.0% | |
| CATTGTTCTCCTGCAACTCT+TGG | + | chr8_1:63842893-63842912 | Msa1206760:CDS | 45.0% | |
| ! | GGCCTTTGGAAAATACCAAC+TGG | + | chr8_1:63842914-63842933 | Msa1206760:CDS | 45.0% |
| CATCTGTTTCCCTTTGAACC+AGG | - | chr8_1:63842999-63843018 | None:intergenic | 45.0% | |
| TCGCTTGTGTGAATTGTCTC+AGG | + | chr8_1:63843264-63843283 | Msa1206760:intron | 45.0% | |
| CAGGCAGAGGAGATTTATAC+AGG | + | chr8_1:63843283-63843302 | Msa1206760:intron | 45.0% | |
| AGGAGCTGTAAGAGAAGTGA+AGG | + | chr8_1:63843303-63843322 | Msa1206760:CDS | 45.0% | |
| TGCTCTACAAACTCAACCAG+TGG | - | chr8_1:63843767-63843786 | None:intergenic | 45.0% | |
| CGTCTTGGGAAACGTTATTG+TGG | + | chr8_1:63843842-63843861 | Msa1206760:CDS | 45.0% | |
| !!! | GAACTTTTTTGCCAACGCGG+TGG | - | chr8_1:63842399-63842418 | None:intergenic | 50.0% |
| !! | TCACATATCCTGGCTCTGCA+TGG | - | chr8_1:63842623-63842642 | None:intergenic | 50.0% |
| ! | GCATTTGCTGGAAGCATGCA+AGG | - | chr8_1:63842672-63842691 | None:intergenic | 50.0% |
| TCACATCAAGTCGGAATCGG+AGG | + | chr8_1:63842693-63842712 | Msa1206760:CDS | 50.0% | |
| TTCCAAAGGCCAAGAGTTGC+AGG | - | chr8_1:63842905-63842924 | None:intergenic | 50.0% | |
| AGTTGTTAGAACAGCAGCCC+TGG | + | chr8_1:63842978-63842997 | Msa1206760:intron | 50.0% | |
| AACAGCAGCCCTGGTTCAAA+GGG | + | chr8_1:63842987-63843006 | Msa1206760:intron | 50.0% | |
| GTGTGAATTGTCTCAGGCAG+AGG | + | chr8_1:63843270-63843289 | Msa1206760:intron | 50.0% | |
| AGGAGCAAAATGGATGCCAC+TGG | + | chr8_1:63843748-63843767 | Msa1206760:CDS | 50.0% | |
| AAGCAAAAAGGCCACCGCGT+TGG | + | chr8_1:63842385-63842404 | Msa1206760:intron | 55.0% | |
| CAATACCACCATGCAGAGCC+AGG | + | chr8_1:63842612-63842631 | Msa1206760:CDS | 55.0% | |
| !! | CATATCCTGGCTCTGCATGG+TGG | - | chr8_1:63842620-63842639 | None:intergenic | 55.0% |
| ! | GGAAGCATGCAAGGTCCTTC+AGG | - | chr8_1:63842663-63842682 | None:intergenic | 55.0% |
| ! | CTCCTGCAACTCTTGGCCTT+TGG | + | chr8_1:63842900-63842919 | Msa1206760:CDS | 55.0% |
| GAACAGCAGCCCTGGTTCAA+AGG | + | chr8_1:63842986-63843005 | Msa1206760:intron | 55.0% | |
| CCTCTGCGGCACTTGAACTG+AGG | - | chr8_1:63841367-63841386 | None:intergenic | 60.0% | |
| ! | CCTCAGTTCAAGTGCCGCAG+AGG | + | chr8_1:63841364-63841383 | Msa1206760:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 63840991 | 63844222 | 63840991 | ID=Msa1206760;Name=Msa1206760 |
| chr8_1 | mRNA | 63840991 | 63844222 | 63840991 | ID=Msa1206760-mRNA-1;Parent=Msa1206760;Name=Msa1206760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=265|1|1|1|1|1|8|258|357 |
| chr8_1 | exon | 63840991 | 63841385 | 63840991 | ID=Msa1206760-mRNA-1:exon:20799;Parent=Msa1206760-mRNA-1 |
| chr8_1 | exon | 63841665 | 63841924 | 63841665 | ID=Msa1206760-mRNA-1:exon:20800;Parent=Msa1206760-mRNA-1 |
| chr8_1 | exon | 63842007 | 63842072 | 63842007 | ID=Msa1206760-mRNA-1:exon:20801;Parent=Msa1206760-mRNA-1 |
| chr8_1 | exon | 63842603 | 63842740 | 63842603 | ID=Msa1206760-mRNA-1:exon:20802;Parent=Msa1206760-mRNA-1 |
| chr8_1 | exon | 63842872 | 63842949 | 63842872 | ID=Msa1206760-mRNA-1:exon:20803;Parent=Msa1206760-mRNA-1 |
| chr8_1 | exon | 63843286 | 63843336 | 63843286 | ID=Msa1206760-mRNA-1:exon:20804;Parent=Msa1206760-mRNA-1 |
| chr8_1 | exon | 63843480 | 63843514 | 63843480 | ID=Msa1206760-mRNA-1:exon:20805;Parent=Msa1206760-mRNA-1 |
| chr8_1 | exon | 63843649 | 63844222 | 63843649 | ID=Msa1206760-mRNA-1:exon:20806;Parent=Msa1206760-mRNA-1 |
| chr8_1 | five_prime_UTR | 63840991 | 63841255 | 63840991 | ID=Msa1206760-mRNA-1:five_prime_utr;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63841256 | 63841385 | 63841256 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63841665 | 63841924 | 63841665 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63842007 | 63842072 | 63842007 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63842603 | 63842740 | 63842603 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63842872 | 63842949 | 63842872 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63843286 | 63843336 | 63843286 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63843480 | 63843514 | 63843480 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | CDS | 63843649 | 63843964 | 63843649 | ID=Msa1206760-mRNA-1:cds;Parent=Msa1206760-mRNA-1 |
| chr8_1 | three_prime_UTR | 63843965 | 63844222 | 63843965 | ID=Msa1206760-mRNA-1:three_prime_utr;Parent=Msa1206760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
