Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202740 | XP_013463465.1 | 95.082 | 549 | 22 | 3 | 1 | 548 | 1 | 545 | 0.0 | 1045 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202740 | sp|Q0JLP9|P2C06_ORYSJ | 57.864 | 337 | 117 | 7 | 221 | 548 | 147 | 467 | 1.66e-134 | 402 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202740 | A0A072VH76 | 95.082 | 549 | 22 | 3 | 1 | 548 | 1 | 545 | 0.0 | 1045 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004340 | Msa0202740 | 0.820729 | 5.881887e-53 | -8.615850e-47 |
Msa0014410 | Msa0202740 | 0.800895 | 1.163061e-48 | -8.615850e-47 |
Msa0064550 | Msa0202740 | 0.844284 | 8.316049e-59 | -8.615850e-47 |
Msa0072830 | Msa0202740 | 0.820691 | 6.000154e-53 | -8.615850e-47 |
Msa0072860 | Msa0202740 | 0.818557 | 1.842398e-52 | -8.615850e-47 |
Msa0091470 | Msa0202740 | 0.809885 | 1.516935e-50 | -8.615850e-47 |
Msa0108070 | Msa0202740 | 0.814198 | 1.741058e-51 | -8.615850e-47 |
Msa0154220 | Msa0202740 | 0.812367 | 4.392625e-51 | -8.615850e-47 |
Msa0154240 | Msa0202740 | 0.818634 | 1.769828e-52 | -8.615850e-47 |
Msa0154270 | Msa0202740 | 0.855409 | 6.432109e-62 | -8.615850e-47 |
Msa0187980 | Msa0202740 | 0.812102 | 5.020440e-51 | -8.615850e-47 |
Msa0196630 | Msa0202740 | 0.831032 | 2.100344e-55 | -8.615850e-47 |
Msa0197030 | Msa0202740 | 0.810059 | 1.391120e-50 | -8.615850e-47 |
Msa0202740 | Msa0224370 | 0.802030 | 6.806999e-49 | -8.615850e-47 |
Msa0202740 | Msa0224400 | 0.813590 | 2.369651e-51 | -8.615850e-47 |
Msa0202740 | Msa0245870 | 0.862327 | 5.480692e-64 | -8.615850e-47 |
Msa0202740 | Msa0308570 | 0.854063 | 1.579255e-61 | -8.615850e-47 |
Msa0202740 | Msa0344680 | 0.835628 | 1.502330e-56 | -8.615850e-47 |
Msa0202740 | Msa0387970 | 0.800537 | 1.375600e-48 | -8.615850e-47 |
Msa0202740 | Msa0392050 | 0.837689 | 4.482863e-57 | -8.615850e-47 |
Msa0202740 | Msa0392540 | 0.802590 | 5.220626e-49 | -8.615850e-47 |
Msa0202740 | Msa0401340 | 0.816746 | 4.717773e-52 | -8.615850e-47 |
Msa0202740 | Msa0404060 | 0.819144 | 1.355348e-52 | -8.615850e-47 |
Msa0202740 | Msa0404070 | 0.823388 | 1.423053e-53 | -8.615850e-47 |
Msa0202740 | Msa0448120 | 0.817984 | 2.483700e-52 | -8.615850e-47 |
Msa0202740 | Msa0469950 | 0.837745 | 4.337078e-57 | -8.615850e-47 |
Msa0202740 | Msa0471760 | 0.808640 | 2.804069e-50 | -8.615850e-47 |
Msa0202740 | Msa0515460 | 0.805026 | 1.628361e-49 | -8.615850e-47 |
Msa0202740 | Msa0530340 | 0.845829 | 3.180853e-59 | -8.615850e-47 |
Msa0202740 | Msa0545230 | 0.838125 | 3.461664e-57 | -8.615850e-47 |
Msa0202740 | Msa0548210 | 0.814082 | 1.846824e-51 | -8.615850e-47 |
Msa0202740 | Msa0549110 | 0.817832 | 2.688068e-52 | -8.615850e-47 |
Msa0202740 | Msa0549540 | 0.823673 | 1.220432e-53 | -8.615850e-47 |
Msa0202740 | Msa0556070 | 0.838664 | 2.514766e-57 | -8.615850e-47 |
Msa0202740 | Msa0569930 | 0.806185 | 9.298335e-50 | -8.615850e-47 |
Msa0202740 | Msa0570680 | 0.822504 | 2.286516e-53 | -8.615850e-47 |
Msa0202740 | Msa0577050 | 0.850136 | 2.063759e-60 | -8.615850e-47 |
Msa0202740 | Msa0587250 | 0.815175 | 1.057911e-51 | -8.615850e-47 |
Msa0202740 | Msa0604880 | 0.805478 | 1.309226e-49 | -8.615850e-47 |
Msa0202740 | Msa0605250 | 0.858317 | 8.952443e-63 | -8.615850e-47 |
Msa0202740 | Msa0610780 | 0.801303 | 9.597932e-49 | -8.615850e-47 |
Msa0202740 | Msa0610810 | 0.830402 | 2.996227e-55 | -8.615850e-47 |
Msa0202740 | Msa0615430 | 0.804770 | 1.841842e-49 | -8.615850e-47 |
Msa0202740 | Msa0619390 | 0.825285 | 5.094899e-54 | -8.615850e-47 |
Msa0202740 | Msa0622250 | 0.858066 | 1.062894e-62 | -8.615850e-47 |
Msa0202740 | Msa0627050 | 0.822211 | 2.674113e-53 | -8.615850e-47 |
Msa0202740 | Msa0645410 | 0.834753 | 2.497685e-56 | -8.615850e-47 |
Msa0202740 | Msa0646340 | 0.830095 | 3.561806e-55 | -8.615850e-47 |
Msa0202740 | Msa0651310 | 0.822257 | 2.608867e-53 | -8.615850e-47 |
Msa0202740 | Msa0654880 | 0.811768 | 5.935243e-51 | -8.615850e-47 |
Msa0202740 | Msa0675010 | 0.814458 | 1.525060e-51 | -8.615850e-47 |
Msa0202740 | Msa0679780 | 0.839759 | 1.307824e-57 | -8.615850e-47 |
Msa0202740 | Msa0685890 | 0.823427 | 1.393408e-53 | -8.615850e-47 |
Msa0202740 | Msa0693400 | 0.847341 | 1.229314e-59 | -8.615850e-47 |
Msa0202740 | Msa0693500 | 0.813590 | 2.370050e-51 | -8.615850e-47 |
Msa0202740 | Msa0698480 | 0.802086 | 6.629656e-49 | -8.615850e-47 |
Msa0202740 | Msa0698650 | 0.819118 | 1.373469e-52 | -8.615850e-47 |
Msa0202740 | Msa0705810 | 0.855370 | 6.603253e-62 | -8.615850e-47 |
Msa0202740 | Msa0748330 | 0.853441 | 2.385521e-61 | -8.615850e-47 |
Msa0202740 | Msa0748980 | 0.831012 | 2.124555e-55 | -8.615850e-47 |
Msa0202740 | Msa0749150 | 0.800633 | 1.315178e-48 | -8.615850e-47 |
Msa0202740 | Msa0790640 | 0.812358 | 4.414350e-51 | -8.615850e-47 |
Msa0202740 | Msa0793100 | 0.801260 | 9.792105e-49 | -8.615850e-47 |
Msa0202740 | Msa0821030 | 0.806999 | 6.262326e-50 | -8.615850e-47 |
Msa0202740 | Msa0825520 | 0.835397 | 1.718788e-56 | -8.615850e-47 |
Msa0202740 | Msa0864730 | 0.837934 | 3.877617e-57 | -8.615850e-47 |
Msa0202740 | Msa0864750 | 0.838528 | 2.725588e-57 | -8.615850e-47 |
Msa0202740 | Msa0879650 | 0.808362 | 3.215035e-50 | -8.615850e-47 |
Msa0202740 | Msa0904630 | 0.820525 | 6.550806e-53 | -8.615850e-47 |
Msa0202740 | Msa0909720 | 0.816658 | 4.936750e-52 | -8.615850e-47 |
Msa0202740 | Msa0936650 | 0.812897 | 3.364457e-51 | -8.615850e-47 |
Msa0202740 | Msa0936690 | 0.810755 | 9.842181e-51 | -8.615850e-47 |
Msa0202740 | Msa0944690 | 0.810121 | 1.348998e-50 | -8.615850e-47 |
Msa0202740 | Msa0968780 | 0.819207 | 1.311071e-52 | -8.615850e-47 |
Msa0202740 | Msa0973890 | 0.828397 | 9.194882e-55 | -8.615850e-47 |
Msa0202740 | Msa0984000 | 0.855253 | 7.143663e-62 | -8.615850e-47 |
Msa0202740 | Msa1078600 | 0.801738 | 7.813137e-49 | -8.615850e-47 |
Msa0202740 | Msa1082150 | 0.864617 | 1.068990e-64 | -8.615850e-47 |
Msa0202740 | Msa1144730 | 0.839232 | 1.791960e-57 | -8.615850e-47 |
Msa0202740 | Msa1166960 | 0.805663 | 1.197237e-49 | -8.615850e-47 |
Msa0202740 | Msa1173380 | 0.852548 | 4.294458e-61 | -8.615850e-47 |
Msa0202740 | Msa1182800 | 0.826172 | 3.138800e-54 | -8.615850e-47 |
Msa0202740 | Msa1182830 | 0.819888 | 9.169229e-53 | -8.615850e-47 |
Msa0202740 | Msa1184010 | 0.817235 | 3.663833e-52 | -8.615850e-47 |
Msa0202740 | Msa1206760 | 0.805705 | 1.173131e-49 | -8.615850e-47 |
Msa0202740 | Msa1206830 | 0.809951 | 1.468170e-50 | -8.615850e-47 |
Msa0202740 | Msa1226880 | 0.801292 | 9.646948e-49 | -8.615850e-47 |
Msa0202740 | Msa1228350 | 0.807431 | 5.072112e-50 | -8.615850e-47 |
Msa0202740 | Msa1248220 | 0.801432 | 9.029413e-49 | -8.615850e-47 |
Msa0202740 | Msa1255020 | 0.800480 | 1.413096e-48 | -8.615850e-47 |
Msa0202740 | Msa1272950 | 0.800970 | 1.122631e-48 | -8.615850e-47 |
Msa0202740 | Msa1288970 | 0.805776 | 1.133692e-49 | -8.615850e-47 |
Msa0202740 | Msa1349810 | 0.866364 | 3.010627e-65 | -8.615850e-47 |
Msa0202740 | Msa1358340 | 0.849807 | 2.550578e-60 | -8.615850e-47 |
Msa0202740 | Msa1369180 | 0.849099 | 4.019076e-60 | -8.615850e-47 |
Msa0202740 | Msa1384620 | 0.837706 | 4.437735e-57 | -8.615850e-47 |
Msa0202740 | Msa1394900 | 0.821859 | 3.226276e-53 | -8.615850e-47 |
Msa0202740 | Msa1404690 | 0.809997 | 1.434456e-50 | -8.615850e-47 |
Msa0202740 | Msa1405380 | 0.806798 | 6.906933e-50 | -8.615850e-47 |
Msa0202740 | Msa1406020 | 0.805462 | 1.319479e-49 | -8.615850e-47 |
Msa0202740 | Msa1427600 | 0.801775 | 7.678602e-49 | -8.615850e-47 |
Msa0202740 | Msa1434660 | 0.808867 | 2.507830e-50 | -8.615850e-47 |
Msa0202740 | Msa1439070 | 0.805916 | 1.059291e-49 | -8.615850e-47 |
Msa0202740 | Msa1443550 | 0.804062 | 2.586462e-49 | -8.615850e-47 |
Msa0202740 | Msa1459540 | 0.807896 | 4.041224e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202740 | MtrunA17_Chr2g0299981 | 95.082 | 549 | 22 | 3 | 1 | 548 | 1 | 545 | 0.0 | 1045 |
Msa0202740 | MtrunA17_Chr4g0070871 | 57.394 | 568 | 167 | 10 | 1 | 548 | 1 | 513 | 0.0 | 593 |
Msa0202740 | MtrunA17_Chr1g0150781 | 44.792 | 576 | 267 | 14 | 1 | 548 | 1 | 553 | 3.40e-150 | 442 |
Msa0202740 | MtrunA17_Chr3g0135961 | 44.041 | 579 | 263 | 15 | 1 | 548 | 1 | 549 | 7.95e-148 | 436 |
Msa0202740 | MtrunA17_Chr8g0389921 | 45.732 | 328 | 133 | 7 | 224 | 543 | 149 | 439 | 4.11e-87 | 276 |
Msa0202740 | MtrunA17_Chr3g0112291 | 42.398 | 342 | 148 | 8 | 211 | 543 | 80 | 381 | 1.08e-79 | 255 |
Msa0202740 | MtrunA17_Chr5g0396731 | 44.340 | 318 | 140 | 7 | 221 | 538 | 70 | 350 | 3.68e-72 | 234 |
Msa0202740 | MtrunA17_Chr1g0158781 | 44.444 | 324 | 123 | 9 | 222 | 540 | 110 | 381 | 1.17e-67 | 223 |
Msa0202740 | MtrunA17_Chr5g0435721 | 45.385 | 260 | 109 | 3 | 221 | 480 | 190 | 416 | 5.23e-66 | 222 |
Msa0202740 | MtrunA17_Chr1g0150451 | 33.746 | 323 | 139 | 8 | 224 | 543 | 78 | 328 | 4.80e-44 | 159 |
Msa0202740 | MtrunA17_Chr3g0136711 | 31.283 | 374 | 155 | 9 | 166 | 536 | 4 | 278 | 8.06e-44 | 157 |
Msa0202740 | MtrunA17_Chr1g0212961 | 35.144 | 313 | 130 | 9 | 224 | 536 | 96 | 335 | 1.17e-42 | 155 |
Msa0202740 | MtrunA17_Chr3g0126511 | 32.500 | 320 | 145 | 6 | 225 | 543 | 96 | 345 | 9.22e-39 | 145 |
Msa0202740 | MtrunA17_Chr5g0430481 | 32.258 | 310 | 144 | 8 | 231 | 539 | 131 | 375 | 4.62e-37 | 141 |
Msa0202740 | MtrunA17_Chr3g0105351 | 33.212 | 274 | 127 | 7 | 270 | 539 | 94 | 315 | 8.88e-36 | 136 |
Msa0202740 | MtrunA17_Chr4g0050381 | 34.557 | 327 | 137 | 12 | 219 | 540 | 24 | 278 | 1.53e-35 | 134 |
Msa0202740 | MtrunA17_Chr3g0105371 | 32.847 | 274 | 128 | 6 | 270 | 539 | 118 | 339 | 1.03e-34 | 134 |
Msa0202740 | MtrunA17_Chr1g0150071 | 33.333 | 291 | 148 | 9 | 224 | 489 | 24 | 293 | 9.23e-34 | 131 |
Msa0202740 | MtrunA17_Chr3g0136811 | 30.435 | 345 | 181 | 10 | 224 | 543 | 24 | 334 | 1.66e-32 | 128 |
Msa0202740 | MtrunA17_Chr4g0001761 | 32.845 | 341 | 169 | 13 | 224 | 539 | 24 | 329 | 1.92e-32 | 128 |
Msa0202740 | MtrunA17_Chr3g0115851 | 32.812 | 320 | 139 | 10 | 224 | 539 | 35 | 282 | 3.35e-31 | 122 |
Msa0202740 | MtrunA17_Chr2g0279151 | 34.259 | 324 | 134 | 12 | 222 | 539 | 31 | 281 | 2.62e-29 | 117 |
Msa0202740 | MtrunA17_Chr4g0065141 | 30.450 | 289 | 135 | 9 | 265 | 541 | 119 | 353 | 1.61e-28 | 117 |
Msa0202740 | MtrunA17_Chr5g0426141 | 33.231 | 325 | 131 | 12 | 224 | 539 | 35 | 282 | 2.44e-28 | 114 |
Msa0202740 | MtrunA17_Chr3g0138281 | 29.154 | 319 | 160 | 10 | 230 | 541 | 89 | 348 | 8.25e-28 | 115 |
Msa0202740 | MtrunA17_Chr8g0360351 | 30.725 | 345 | 160 | 13 | 199 | 536 | 7 | 279 | 7.76e-27 | 110 |
Msa0202740 | MtrunA17_Chr4g0051661 | 32.593 | 270 | 122 | 8 | 270 | 536 | 183 | 395 | 3.42e-26 | 110 |
Msa0202740 | MtrunA17_Chr5g0407161 | 30.769 | 273 | 130 | 9 | 270 | 536 | 124 | 343 | 3.99e-26 | 110 |
Msa0202740 | MtrunA17_Chr2g0317021 | 32.416 | 327 | 145 | 13 | 217 | 539 | 79 | 333 | 4.27e-26 | 109 |
Msa0202740 | MtrunA17_Chr1g0194191 | 30.935 | 278 | 141 | 10 | 270 | 540 | 118 | 351 | 5.35e-26 | 110 |
Msa0202740 | MtrunA17_Chr1g0171571 | 28.889 | 360 | 184 | 13 | 192 | 539 | 346 | 645 | 1.62e-25 | 110 |
Msa0202740 | MtrunA17_Chr3g0144111 | 30.292 | 274 | 109 | 9 | 270 | 536 | 27 | 225 | 2.61e-24 | 102 |
Msa0202740 | MtrunA17_Chr2g0293811 | 29.856 | 278 | 144 | 11 | 270 | 540 | 100 | 333 | 2.76e-24 | 104 |
Msa0202740 | MtrunA17_Chr3g0127091 | 26.776 | 366 | 174 | 13 | 208 | 538 | 43 | 349 | 2.79e-22 | 99.0 |
Msa0202740 | MtrunA17_Chr6g0483411 | 27.692 | 325 | 162 | 11 | 231 | 539 | 52 | 319 | 2.32e-21 | 95.1 |
Msa0202740 | MtrunA17_Chr7g0243571 | 29.811 | 265 | 127 | 10 | 251 | 478 | 77 | 319 | 3.03e-19 | 90.5 |
Msa0202740 | MtrunA17_Chr1g0185141 | 25.964 | 389 | 189 | 15 | 231 | 540 | 72 | 440 | 9.62e-19 | 90.5 |
Msa0202740 | MtrunA17_Chr3g0089721 | 28.618 | 304 | 161 | 8 | 268 | 538 | 66 | 346 | 2.45e-18 | 87.0 |
Msa0202740 | MtrunA17_Chr4g0067711 | 32.203 | 236 | 116 | 9 | 270 | 479 | 91 | 308 | 6.34e-18 | 85.5 |
Msa0202740 | MtrunA17_Chr7g0256771 | 29.845 | 258 | 123 | 9 | 255 | 479 | 55 | 287 | 8.16e-18 | 84.7 |
Msa0202740 | MtrunA17_Chr3g0089711 | 28.289 | 304 | 162 | 8 | 268 | 538 | 66 | 346 | 1.29e-17 | 84.7 |
Msa0202740 | MtrunA17_Chr7g0250061 | 27.309 | 249 | 121 | 8 | 270 | 484 | 76 | 298 | 2.61e-17 | 84.0 |
Msa0202740 | MtrunA17_Chr1g0209451 | 27.848 | 316 | 156 | 10 | 234 | 538 | 43 | 297 | 2.63e-17 | 84.3 |
Msa0202740 | MtrunA17_Chr7g0225501 | 31.651 | 218 | 114 | 8 | 271 | 477 | 87 | 280 | 4.50e-17 | 84.0 |
Msa0202740 | MtrunA17_Chr1g0151781 | 28.936 | 235 | 124 | 7 | 270 | 479 | 68 | 284 | 1.58e-16 | 81.3 |
Msa0202740 | MtrunA17_Chr7g0221691 | 30.705 | 241 | 130 | 8 | 270 | 478 | 129 | 364 | 3.02e-16 | 81.3 |
Msa0202740 | MtrunA17_Chr8g0371321 | 27.530 | 247 | 123 | 7 | 270 | 484 | 79 | 301 | 4.09e-16 | 80.5 |
Msa0202740 | MtrunA17_Chr1g0211251 | 26.908 | 249 | 122 | 8 | 270 | 484 | 81 | 303 | 5.36e-16 | 80.1 |
Msa0202740 | MtrunA17_Chr7g0256751 | 27.907 | 258 | 132 | 8 | 255 | 481 | 54 | 288 | 7.35e-16 | 80.1 |
Msa0202740 | MtrunA17_Chr7g0249421 | 30.364 | 247 | 137 | 8 | 270 | 481 | 96 | 342 | 2.05e-15 | 79.0 |
Msa0202740 | MtrunA17_Chr1g0213351 | 27.530 | 247 | 123 | 7 | 270 | 484 | 80 | 302 | 2.73e-15 | 77.8 |
Msa0202740 | MtrunA17_Chr7g0263281 | 26.639 | 244 | 123 | 7 | 270 | 481 | 71 | 290 | 3.03e-15 | 77.4 |
Msa0202740 | MtrunA17_Chr7g0272061 | 31.064 | 235 | 133 | 8 | 270 | 481 | 91 | 319 | 8.98e-15 | 76.3 |
Msa0202740 | MtrunA17_Chr7g0271971 | 26.019 | 319 | 164 | 8 | 231 | 538 | 40 | 297 | 8.24e-14 | 73.6 |
Msa0202740 | MtrunA17_Chr4g0063111 | 26.364 | 330 | 168 | 13 | 251 | 541 | 56 | 349 | 8.95e-14 | 73.9 |
Msa0202740 | MtrunA17_Chr1g0192421 | 28.992 | 238 | 125 | 7 | 270 | 481 | 89 | 308 | 2.98e-13 | 71.2 |
Msa0202740 | MtrunA17_Chr4g0004971 | 28.689 | 244 | 126 | 10 | 264 | 478 | 74 | 298 | 3.15e-13 | 71.2 |
Msa0202740 | MtrunA17_Chr1g0192471 | 25.857 | 321 | 162 | 10 | 231 | 538 | 40 | 297 | 1.39e-12 | 69.7 |
Msa0202740 | MtrunA17_Chr2g0294291 | 25.794 | 252 | 130 | 8 | 267 | 485 | 72 | 299 | 1.44e-12 | 69.3 |
Msa0202740 | MtrunA17_Chr3g0133801 | 24.348 | 345 | 175 | 12 | 228 | 543 | 13 | 300 | 2.36e-12 | 68.9 |
Msa0202740 | MtrunA17_Chr7g0238501 | 23.762 | 303 | 184 | 9 | 270 | 541 | 263 | 549 | 4.59e-12 | 68.6 |
Msa0202740 | MtrunA17_Chr3g0089691 | 31.280 | 211 | 112 | 6 | 361 | 538 | 50 | 260 | 9.80e-12 | 66.2 |
Msa0202740 | MtrunA17_Chr1g0153671 | 25.965 | 285 | 148 | 9 | 271 | 543 | 66 | 299 | 2.01e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202740 | AT4G26080.1 | 55.014 | 349 | 126 | 5 | 204 | 547 | 109 | 431 | 1.02e-128 | 383 |
Msa0202740 | AT1G72770.4 | 55.490 | 337 | 137 | 6 | 217 | 548 | 183 | 511 | 1.12e-126 | 380 |
Msa0202740 | AT1G72770.1 | 55.490 | 337 | 137 | 6 | 217 | 548 | 183 | 511 | 1.12e-126 | 380 |
Msa0202740 | AT1G72770.3 | 55.490 | 337 | 137 | 6 | 217 | 548 | 183 | 511 | 1.12e-126 | 380 |
Msa0202740 | AT1G17550.1 | 55.490 | 337 | 138 | 5 | 217 | 548 | 182 | 511 | 1.87e-126 | 380 |
Msa0202740 | AT1G17550.2 | 55.490 | 337 | 138 | 5 | 217 | 548 | 182 | 511 | 1.87e-126 | 380 |
Msa0202740 | AT5G57050.1 | 54.913 | 346 | 130 | 4 | 208 | 548 | 97 | 421 | 3.61e-126 | 376 |
Msa0202740 | AT5G57050.2 | 55.202 | 346 | 129 | 5 | 208 | 548 | 57 | 381 | 4.71e-126 | 374 |
Msa0202740 | AT2G29380.1 | 43.731 | 327 | 151 | 8 | 213 | 539 | 68 | 361 | 1.57e-79 | 254 |
Msa0202740 | AT5G51760.2 | 43.068 | 339 | 157 | 8 | 217 | 543 | 72 | 386 | 3.63e-76 | 246 |
Msa0202740 | AT5G51760.1 | 42.241 | 348 | 147 | 9 | 217 | 543 | 102 | 416 | 7.56e-76 | 246 |
Msa0202740 | AT1G07430.1 | 39.691 | 388 | 167 | 10 | 184 | 543 | 90 | 438 | 3.21e-75 | 245 |
Msa0202740 | AT3G11410.1 | 47.080 | 274 | 109 | 6 | 218 | 484 | 99 | 343 | 1.06e-74 | 243 |
Msa0202740 | AT5G57050.3 | 51.542 | 227 | 87 | 4 | 216 | 441 | 105 | 309 | 1.34e-71 | 231 |
Msa0202740 | AT1G72770.2 | 52.655 | 226 | 95 | 5 | 217 | 437 | 183 | 401 | 1.06e-69 | 230 |
Msa0202740 | AT1G72770.5 | 52.655 | 226 | 95 | 5 | 217 | 437 | 183 | 401 | 1.06e-69 | 230 |
Msa0202740 | AT5G59220.1 | 45.660 | 265 | 111 | 5 | 222 | 484 | 110 | 343 | 3.92e-68 | 226 |
Msa0202740 | AT5G59220.2 | 43.119 | 218 | 91 | 5 | 222 | 437 | 110 | 296 | 7.88e-48 | 169 |
Msa0202740 | AT5G24940.1 | 37.984 | 258 | 111 | 7 | 224 | 480 | 34 | 243 | 3.04e-43 | 160 |
Msa0202740 | AT1G43900.1 | 33.438 | 320 | 135 | 7 | 224 | 539 | 124 | 369 | 4.89e-43 | 157 |
Msa0202740 | AT4G31750.1 | 32.803 | 314 | 140 | 7 | 224 | 536 | 34 | 277 | 6.06e-43 | 155 |
Msa0202740 | AT4G31750.3 | 32.803 | 314 | 140 | 7 | 224 | 536 | 34 | 277 | 6.06e-43 | 155 |
Msa0202740 | AT4G31750.2 | 32.803 | 314 | 140 | 7 | 224 | 536 | 34 | 277 | 6.94e-43 | 155 |
Msa0202740 | AT5G10740.1 | 34.700 | 317 | 130 | 10 | 224 | 536 | 34 | 277 | 7.36e-43 | 157 |
Msa0202740 | AT5G10740.2 | 34.700 | 317 | 130 | 10 | 224 | 536 | 34 | 277 | 7.36e-43 | 157 |
Msa0202740 | AT5G53140.1 | 32.595 | 316 | 142 | 8 | 225 | 539 | 103 | 348 | 1.36e-40 | 152 |
Msa0202740 | AT5G53140.2 | 32.595 | 316 | 142 | 8 | 225 | 539 | 103 | 348 | 1.36e-40 | 152 |
Msa0202740 | AT1G67820.2 | 30.811 | 370 | 151 | 10 | 224 | 538 | 85 | 404 | 1.94e-39 | 149 |
Msa0202740 | AT1G67820.1 | 30.811 | 370 | 151 | 10 | 224 | 538 | 121 | 440 | 4.07e-39 | 149 |
Msa0202740 | AT2G30020.1 | 33.754 | 317 | 139 | 8 | 231 | 544 | 147 | 395 | 1.35e-38 | 146 |
Msa0202740 | AT2G40180.1 | 33.125 | 320 | 149 | 11 | 225 | 539 | 127 | 386 | 1.22e-37 | 143 |
Msa0202740 | AT1G07160.1 | 35.662 | 272 | 124 | 6 | 270 | 538 | 153 | 376 | 4.98e-36 | 139 |
Msa0202740 | AT4G31860.3 | 33.910 | 289 | 145 | 10 | 224 | 487 | 24 | 291 | 1.71e-31 | 124 |
Msa0202740 | AT4G31860.1 | 31.672 | 341 | 174 | 12 | 224 | 539 | 24 | 330 | 1.75e-31 | 125 |
Msa0202740 | AT2G25620.1 | 29.721 | 323 | 157 | 9 | 230 | 541 | 96 | 359 | 5.26e-31 | 125 |
Msa0202740 | AT2G25620.2 | 29.721 | 323 | 157 | 9 | 230 | 541 | 96 | 359 | 5.26e-31 | 125 |
Msa0202740 | AT1G34750.2 | 32.565 | 347 | 151 | 15 | 200 | 539 | 12 | 282 | 5.36e-31 | 122 |
Msa0202740 | AT1G34750.1 | 32.565 | 347 | 151 | 15 | 200 | 539 | 12 | 282 | 5.36e-31 | 122 |
Msa0202740 | AT1G34750.3 | 32.565 | 347 | 151 | 15 | 200 | 539 | 12 | 282 | 5.36e-31 | 122 |
Msa0202740 | AT1G22280.3 | 31.562 | 320 | 149 | 12 | 224 | 539 | 34 | 287 | 4.47e-30 | 119 |
Msa0202740 | AT2G25070.1 | 30.172 | 348 | 178 | 13 | 224 | 546 | 24 | 331 | 6.54e-30 | 120 |
Msa0202740 | AT2G25070.2 | 30.172 | 348 | 178 | 13 | 224 | 546 | 24 | 331 | 6.54e-30 | 120 |
Msa0202740 | AT1G78200.1 | 30.650 | 323 | 145 | 9 | 224 | 539 | 33 | 283 | 1.58e-29 | 118 |
Msa0202740 | AT1G78200.3 | 30.650 | 323 | 145 | 9 | 224 | 539 | 33 | 283 | 1.58e-29 | 118 |
Msa0202740 | AT1G78200.2 | 30.650 | 323 | 145 | 9 | 224 | 539 | 33 | 283 | 1.58e-29 | 118 |
Msa0202740 | AT1G78200.5 | 31.522 | 276 | 127 | 7 | 270 | 539 | 19 | 238 | 9.67e-29 | 114 |
Msa0202740 | AT1G78200.4 | 31.522 | 276 | 127 | 7 | 270 | 539 | 19 | 238 | 9.67e-29 | 114 |
Msa0202740 | AT1G22280.1 | 31.875 | 320 | 142 | 12 | 224 | 539 | 34 | 281 | 1.14e-28 | 115 |
Msa0202740 | AT1G48040.1 | 33.212 | 274 | 134 | 8 | 270 | 536 | 116 | 347 | 2.01e-28 | 117 |
Msa0202740 | AT3G51470.1 | 29.487 | 312 | 148 | 10 | 231 | 536 | 80 | 325 | 2.17e-28 | 116 |
Msa0202740 | AT3G51470.2 | 29.487 | 312 | 148 | 10 | 231 | 536 | 36 | 281 | 2.53e-28 | 115 |
Msa0202740 | AT4G31860.2 | 34.432 | 273 | 133 | 10 | 224 | 471 | 24 | 275 | 7.57e-28 | 113 |
Msa0202740 | AT3G15260.2 | 30.625 | 320 | 146 | 11 | 224 | 539 | 42 | 289 | 8.69e-28 | 113 |
Msa0202740 | AT3G15260.1 | 30.625 | 320 | 146 | 11 | 224 | 539 | 42 | 289 | 8.69e-28 | 113 |
Msa0202740 | AT2G34740.1 | 31.834 | 289 | 133 | 10 | 255 | 536 | 101 | 332 | 1.44e-27 | 114 |
Msa0202740 | AT2G33700.1 | 29.969 | 327 | 152 | 11 | 222 | 536 | 81 | 342 | 1.90e-27 | 114 |
Msa0202740 | AT4G28400.3 | 32.414 | 290 | 134 | 10 | 255 | 538 | 27 | 260 | 2.03e-27 | 111 |
Msa0202740 | AT2G40860.4 | 31.132 | 318 | 154 | 11 | 225 | 539 | 296 | 551 | 2.43e-27 | 116 |
Msa0202740 | AT2G40860.1 | 31.132 | 318 | 154 | 11 | 225 | 539 | 394 | 649 | 3.51e-27 | 116 |
Msa0202740 | AT3G17250.1 | 29.603 | 277 | 142 | 7 | 270 | 536 | 158 | 391 | 3.52e-27 | 114 |
Msa0202740 | AT4G28400.1 | 32.414 | 290 | 134 | 10 | 255 | 538 | 49 | 282 | 4.43e-27 | 111 |
Msa0202740 | AT3G62260.3 | 30.037 | 273 | 143 | 8 | 270 | 536 | 27 | 257 | 1.00e-26 | 110 |
Msa0202740 | AT3G62260.2 | 30.037 | 273 | 143 | 8 | 270 | 536 | 117 | 347 | 1.48e-26 | 112 |
Msa0202740 | AT3G62260.1 | 30.037 | 273 | 143 | 8 | 270 | 536 | 116 | 346 | 1.53e-26 | 112 |
Msa0202740 | AT2G20630.1 | 33.051 | 236 | 118 | 7 | 255 | 484 | 45 | 246 | 9.19e-26 | 107 |
Msa0202740 | AT1G34750.4 | 32.069 | 290 | 134 | 13 | 200 | 482 | 12 | 245 | 1.54e-25 | 105 |
Msa0202740 | AT2G20630.2 | 33.051 | 236 | 118 | 7 | 255 | 484 | 45 | 246 | 2.86e-25 | 106 |
Msa0202740 | AT2G40860.2 | 31.955 | 266 | 137 | 9 | 225 | 487 | 394 | 618 | 4.59e-25 | 110 |
Msa0202740 | AT2G34740.2 | 33.043 | 230 | 112 | 9 | 255 | 477 | 115 | 309 | 2.67e-23 | 101 |
Msa0202740 | AT2G34740.3 | 33.043 | 230 | 112 | 9 | 255 | 477 | 97 | 291 | 2.88e-23 | 100 |
Msa0202740 | AT4G08260.1 | 29.927 | 274 | 110 | 6 | 271 | 544 | 20 | 211 | 1.30e-22 | 96.7 |
Msa0202740 | AT3G16800.2 | 33.898 | 236 | 116 | 9 | 270 | 484 | 93 | 309 | 3.56e-22 | 98.6 |
Msa0202740 | AT3G16800.1 | 33.898 | 236 | 116 | 9 | 270 | 484 | 93 | 309 | 3.56e-22 | 98.6 |
Msa0202740 | AT3G16800.3 | 33.898 | 236 | 116 | 9 | 270 | 484 | 93 | 309 | 3.56e-22 | 98.6 |
Msa0202740 | AT4G28400.2 | 32.000 | 225 | 113 | 7 | 255 | 473 | 49 | 239 | 5.74e-22 | 95.9 |
Msa0202740 | AT3G16800.4 | 33.906 | 233 | 114 | 9 | 273 | 484 | 1 | 214 | 6.21e-22 | 95.9 |
Msa0202740 | AT3G16800.6 | 33.906 | 233 | 114 | 9 | 273 | 484 | 1 | 214 | 6.21e-22 | 95.9 |
Msa0202740 | AT3G63320.1 | 26.836 | 354 | 183 | 12 | 246 | 540 | 46 | 382 | 1.07e-21 | 98.2 |
Msa0202740 | AT3G63320.2 | 30.973 | 226 | 98 | 7 | 362 | 540 | 85 | 299 | 4.74e-21 | 95.5 |
Msa0202740 | AT4G27800.1 | 28.219 | 365 | 161 | 15 | 221 | 543 | 56 | 361 | 2.59e-20 | 93.6 |
Msa0202740 | AT1G18030.1 | 28.135 | 327 | 158 | 15 | 231 | 539 | 82 | 349 | 6.34e-20 | 92.0 |
Msa0202740 | AT3G63340.12 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 7.87e-20 | 93.2 |
Msa0202740 | AT3G63340.11 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 2.17e-19 | 92.8 |
Msa0202740 | AT3G63340.6 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 2.56e-19 | 92.8 |
Msa0202740 | AT3G63340.3 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 2.56e-19 | 92.8 |
Msa0202740 | AT3G63340.10 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 2.56e-19 | 92.8 |
Msa0202740 | AT3G63340.4 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 2.56e-19 | 92.8 |
Msa0202740 | AT3G63340.8 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 2.86e-19 | 92.4 |
Msa0202740 | AT3G63340.5 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 3.06e-19 | 92.4 |
Msa0202740 | AT3G63340.1 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 3.06e-19 | 92.4 |
Msa0202740 | AT3G63340.7 | 31.416 | 226 | 97 | 8 | 362 | 540 | 233 | 447 | 3.23e-19 | 92.4 |
Msa0202740 | AT1G68410.4 | 28.869 | 336 | 164 | 12 | 222 | 545 | 37 | 309 | 7.26e-19 | 89.7 |
Msa0202740 | AT1G68410.3 | 28.869 | 336 | 164 | 12 | 222 | 545 | 37 | 309 | 7.26e-19 | 89.7 |
Msa0202740 | AT1G68410.1 | 28.869 | 336 | 164 | 12 | 222 | 545 | 37 | 309 | 7.26e-19 | 89.7 |
Msa0202740 | AT1G68410.2 | 28.869 | 336 | 164 | 12 | 222 | 545 | 37 | 309 | 7.26e-19 | 89.7 |
Msa0202740 | AT5G01700.1 | 32.018 | 228 | 123 | 9 | 270 | 478 | 29 | 243 | 1.87e-18 | 87.0 |
Msa0202740 | AT5G01700.2 | 32.018 | 228 | 123 | 9 | 270 | 478 | 78 | 292 | 2.49e-18 | 87.4 |
Msa0202740 | AT3G17090.2 | 31.557 | 244 | 111 | 10 | 270 | 481 | 84 | 303 | 3.23e-18 | 86.3 |
Msa0202740 | AT3G17090.1 | 31.557 | 244 | 111 | 10 | 270 | 481 | 84 | 303 | 3.82e-18 | 87.0 |
Msa0202740 | AT3G27140.1 | 27.798 | 277 | 101 | 4 | 270 | 546 | 19 | 196 | 1.78e-17 | 82.8 |
Msa0202740 | AT2G40860.3 | 30.453 | 243 | 125 | 9 | 225 | 464 | 394 | 595 | 2.63e-17 | 85.9 |
Msa0202740 | AT5G02760.1 | 27.686 | 242 | 121 | 7 | 270 | 481 | 72 | 289 | 7.62e-17 | 82.8 |
Msa0202740 | AT4G38520.2 | 27.459 | 244 | 121 | 7 | 270 | 481 | 81 | 300 | 1.12e-16 | 82.8 |
Msa0202740 | AT4G38520.1 | 27.459 | 244 | 121 | 7 | 270 | 481 | 81 | 300 | 1.12e-16 | 82.8 |
Msa0202740 | AT1G18030.2 | 28.736 | 261 | 126 | 13 | 231 | 473 | 82 | 300 | 1.21e-16 | 81.3 |
Msa0202740 | AT1G09160.2 | 26.814 | 317 | 158 | 9 | 234 | 538 | 43 | 297 | 1.34e-16 | 82.8 |
Msa0202740 | AT1G09160.1 | 26.814 | 317 | 158 | 9 | 234 | 538 | 43 | 297 | 1.34e-16 | 82.8 |
Msa0202740 | AT3G63340.2 | 37.584 | 149 | 78 | 6 | 396 | 540 | 343 | 480 | 2.03e-16 | 83.6 |
Msa0202740 | AT4G27800.3 | 28.239 | 301 | 141 | 12 | 221 | 487 | 56 | 315 | 2.44e-16 | 80.9 |
Msa0202740 | AT3G51370.1 | 27.530 | 247 | 123 | 8 | 270 | 484 | 79 | 301 | 2.94e-16 | 81.3 |
Msa0202740 | AT3G51370.3 | 27.530 | 247 | 123 | 8 | 270 | 484 | 79 | 301 | 2.94e-16 | 81.3 |
Msa0202740 | AT4G27800.2 | 28.239 | 301 | 141 | 12 | 221 | 487 | 56 | 315 | 3.07e-16 | 80.5 |
Msa0202740 | AT2G05050.1 | 39.370 | 127 | 58 | 2 | 418 | 544 | 85 | 192 | 4.01e-16 | 77.4 |
Msa0202740 | AT5G26010.1 | 28.912 | 294 | 148 | 12 | 272 | 543 | 75 | 329 | 5.65e-16 | 79.7 |
Msa0202740 | AT3G12620.2 | 28.226 | 248 | 118 | 9 | 268 | 481 | 81 | 302 | 9.68e-16 | 79.7 |
Msa0202740 | AT3G12620.1 | 28.226 | 248 | 118 | 9 | 268 | 481 | 81 | 302 | 9.68e-16 | 79.7 |
Msa0202740 | AT4G32950.1 | 31.760 | 233 | 112 | 11 | 272 | 485 | 74 | 278 | 3.73e-15 | 77.0 |
Msa0202740 | AT1G17545.1 | 64.583 | 48 | 17 | 0 | 354 | 401 | 131 | 178 | 1.06e-14 | 72.8 |
Msa0202740 | AT5G27930.1 | 29.151 | 271 | 133 | 9 | 270 | 499 | 92 | 344 | 1.27e-14 | 76.3 |
Msa0202740 | AT5G27930.2 | 29.151 | 271 | 133 | 9 | 270 | 499 | 92 | 344 | 1.27e-14 | 76.3 |
Msa0202740 | AT1G47380.1 | 28.014 | 282 | 136 | 10 | 271 | 538 | 65 | 293 | 1.49e-14 | 76.3 |
Msa0202740 | AT4G33920.1 | 26.433 | 314 | 158 | 12 | 266 | 538 | 57 | 338 | 4.48e-14 | 74.7 |
Msa0202740 | AT3G06270.1 | 24.047 | 341 | 159 | 10 | 234 | 539 | 68 | 343 | 5.13e-14 | 73.9 |
Msa0202740 | AT5G36250.1 | 29.719 | 249 | 142 | 8 | 270 | 485 | 98 | 346 | 5.31e-14 | 74.7 |
Msa0202740 | AT3G05640.2 | 34.545 | 165 | 78 | 5 | 362 | 496 | 172 | 336 | 5.97e-14 | 73.9 |
Msa0202740 | AT3G05640.1 | 34.545 | 165 | 78 | 5 | 362 | 496 | 172 | 336 | 5.97e-14 | 73.9 |
Msa0202740 | AT3G05640.3 | 34.545 | 165 | 78 | 5 | 362 | 496 | 172 | 336 | 5.97e-14 | 73.9 |
Msa0202740 | AT1G79630.2 | 34.000 | 150 | 83 | 3 | 349 | 482 | 139 | 288 | 1.04e-13 | 73.9 |
Msa0202740 | AT1G79630.7 | 34.000 | 150 | 83 | 3 | 349 | 482 | 139 | 288 | 1.04e-13 | 73.9 |
Msa0202740 | AT4G03415.1 | 25.461 | 271 | 139 | 8 | 251 | 481 | 83 | 330 | 1.15e-13 | 73.9 |
Msa0202740 | AT4G03415.3 | 25.461 | 271 | 139 | 8 | 251 | 481 | 83 | 330 | 1.15e-13 | 73.9 |
Msa0202740 | AT4G03415.2 | 25.461 | 271 | 139 | 8 | 251 | 481 | 83 | 330 | 1.15e-13 | 73.9 |
Msa0202740 | AT3G02750.2 | 36.842 | 133 | 68 | 4 | 362 | 478 | 216 | 348 | 1.18e-13 | 73.9 |
Msa0202740 | AT3G02750.1 | 36.842 | 133 | 68 | 4 | 362 | 478 | 216 | 348 | 1.18e-13 | 73.9 |
Msa0202740 | AT1G79630.6 | 34.000 | 150 | 83 | 3 | 349 | 482 | 99 | 248 | 1.57e-13 | 72.8 |
Msa0202740 | AT1G79630.3 | 34.000 | 150 | 83 | 3 | 349 | 482 | 99 | 248 | 1.57e-13 | 72.8 |
Msa0202740 | AT1G79630.4 | 34.000 | 150 | 83 | 3 | 349 | 482 | 99 | 248 | 1.57e-13 | 72.8 |
Msa0202740 | AT1G79630.5 | 34.000 | 150 | 83 | 3 | 349 | 482 | 99 | 248 | 1.57e-13 | 72.8 |
Msa0202740 | AT3G55050.1 | 28.226 | 248 | 118 | 10 | 268 | 481 | 82 | 303 | 1.66e-13 | 72.8 |
Msa0202740 | AT3G55050.2 | 28.226 | 248 | 118 | 10 | 268 | 481 | 82 | 303 | 1.66e-13 | 72.8 |
Msa0202740 | AT1G79630.8 | 34.000 | 150 | 83 | 3 | 349 | 482 | 205 | 354 | 1.68e-13 | 73.6 |
Msa0202740 | AT1G79630.1 | 34.000 | 150 | 83 | 3 | 349 | 482 | 209 | 358 | 1.68e-13 | 73.6 |
Msa0202740 | AT1G16220.1 | 26.556 | 241 | 149 | 7 | 270 | 482 | 95 | 335 | 1.25e-12 | 70.5 |
Msa0202740 | AT3G51370.2 | 31.847 | 157 | 75 | 4 | 360 | 484 | 60 | 216 | 6.71e-12 | 67.0 |
Msa0202740 | AT5G36250.2 | 28.137 | 263 | 142 | 9 | 270 | 485 | 98 | 360 | 6.65e-11 | 65.1 |
Find 104 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTAGCCAGTGATGGTTTA+TGG | 0.134314 | 2_1:+25348471 | Msa0202740:CDS |
CTCGAAAGCGAATCCTTATT+TGG | 0.180664 | 2_1:+25348528 | Msa0202740:CDS |
CGTTCTTCTTATGCCAAATA+AGG | 0.198782 | 2_1:-25348541 | None:intergenic |
ATTAAATTCCCAATTGAAAA+TGG | 0.220143 | 2_1:-25346131 | None:intergenic |
TACTAAAGTTTGCAGTTTAC+AGG | 0.248762 | 2_1:+25348850 | Msa0202740:three_prime_UTR |
AAGATGTTTCTGACAGTAAT+TGG | 0.260229 | 2_1:-25347253 | None:intergenic |
TAGAAAGAAAAGAAAACTTA+TGG | 0.299763 | 2_1:+25346082 | Msa0202740:exon |
TACGGTTTCTCGTCAGTTAT+TGG | 0.301763 | 2_1:+25346770 | Msa0202740:CDS |
TGAACTGTCTCTGAGCCTTC+AGG | 0.318814 | 2_1:-25348691 | None:intergenic |
GAAACATCTTCACTCAGTTT+TGG | 0.322918 | 2_1:+25347266 | Msa0202740:CDS |
AACCATCACTGGCTAGAATA+AGG | 0.337387 | 2_1:-25348466 | None:intergenic |
ATACCGAGTTCTTGGTGTTT+TGG | 0.342014 | 2_1:+25347759 | Msa0202740:CDS |
TCTAGCCAGTGATGGTTTAT+GGG | 0.352985 | 2_1:+25348472 | Msa0202740:CDS |
AACAAGCTGTGATAATGATT+TGG | 0.360848 | 2_1:+25346727 | Msa0202740:CDS |
CGGAGGACAAACTTGACTTC+TGG | 0.365898 | 2_1:-25348425 | None:intergenic |
TTAAATCCTGCTTCAATTGA+GGG | 0.383487 | 2_1:+25346233 | Msa0202740:CDS |
AAAGTAGATGATGTGATTGT+AGG | 0.390379 | 2_1:+25347384 | Msa0202740:CDS |
ACAAATCACATGGAAATAAC+TGG | 0.402753 | 2_1:+25346173 | Msa0202740:CDS |
AGTACCTTCAATGATGCTAA+TGG | 0.405671 | 2_1:+25346844 | Msa0202740:CDS |
TCCCACTCATCCTCTCTATT+AGG | 0.409417 | 2_1:-25347694 | None:intergenic |
TCATCAACCGTGACAGTATT+CGG | 0.411811 | 2_1:-25346548 | None:intergenic |
TTTGATTTGGGAAGATCCTC+AGG | 0.414540 | 2_1:-25348900 | None:intergenic |
GACGGAACCAATGTATCAAC+CGG | 0.415967 | 2_1:+25348563 | Msa0202740:CDS |
GGATCAAGTTGCAGCTGAAC+CGG | 0.426256 | 2_1:+25346349 | Msa0202740:CDS |
ATTAAATCCTGCTTCAATTG+AGG | 0.426529 | 2_1:+25346232 | Msa0202740:CDS |
TGGAACGGATACCGAGTTCT+TGG | 0.427524 | 2_1:+25347751 | Msa0202740:CDS |
TTATAGGATTCTAGAGGATA+AGG | 0.428239 | 2_1:+25346052 | Msa0202740:five_prime_UTR |
AATATCGAGGATGATAAGTA+TGG | 0.431471 | 2_1:+25346572 | Msa0202740:CDS |
TGGTGAGTACTTTCTTCCAT+TGG | 0.438925 | 2_1:-25347350 | None:intergenic |
AGCTGAACCGGCCTCAGAAA+TGG | 0.445690 | 2_1:+25346361 | Msa0202740:CDS |
ATCAACTCCTTGGTCTTGCC+CGG | 0.446950 | 2_1:-25348582 | None:intergenic |
CACAATTCGCAACTATTATG+TGG | 0.447411 | 2_1:-25347524 | None:intergenic |
GTCTTGCCCGGTTGATACAT+TGG | 0.451879 | 2_1:-25348570 | None:intergenic |
TTCTTTCCAACATTAGCTTC+AGG | 0.460728 | 2_1:-25347411 | None:intergenic |
ACAAACTTGACTTCTGGATC+TGG | 0.466720 | 2_1:-25348419 | None:intergenic |
TATTGGAAGGAGACAAGAAA+TGG | 0.466926 | 2_1:+25346787 | Msa0202740:CDS |
GCAGTTGATCCAACAGTCTC+AGG | 0.467835 | 2_1:-25347477 | None:intergenic |
ATCTCATGAACCGCAGCAAT+CGG | 0.469960 | 2_1:-25346683 | None:intergenic |
ACAAATATCAGTGTCTTTCG+AGG | 0.475014 | 2_1:+25346319 | Msa0202740:CDS |
GATGGACTTCAGACATTGGC+AGG | 0.485060 | 2_1:-25349078 | None:intergenic |
CTAGTATATTTATTTAGCCC+TGG | 0.495734 | 2_1:+25348797 | Msa0202740:three_prime_UTR |
TTTGCTGTCTATGATGGACA+TGG | 0.497731 | 2_1:+25346911 | Msa0202740:CDS |
TCTGGATCTGGAATTATCCA+TGG | 0.502540 | 2_1:-25348407 | None:intergenic |
AGTTATTGTTATTGACCTGA+AGG | 0.513508 | 2_1:+25348676 | Msa0202740:CDS |
TGCCTTATTCTAGCCAGTGA+TGG | 0.520110 | 2_1:+25348464 | Msa0202740:CDS |
CTCAGGAGCAAGAGTTTCCT+CGG | 0.523415 | 2_1:-25347460 | None:intergenic |
CACATCCCATAAACCATCAC+TGG | 0.524834 | 2_1:-25348477 | None:intergenic |
ACTCTTGCTCCTGAGACTGT+TGG | 0.528725 | 2_1:+25347468 | Msa0202740:CDS |
TTGGCAGTGTCGAGATCCAT+AGG | 0.528768 | 2_1:+25347778 | Msa0202740:CDS |
CACATAATAGTTGCGAATTG+TGG | 0.532195 | 2_1:+25347525 | Msa0202740:CDS |
TCTGCGGCATAATGAGCTGC+AGG | 0.533192 | 2_1:-25348605 | None:intergenic |
GAGCTGCAGGATCAACTCCT+TGG | 0.534092 | 2_1:-25348592 | None:intergenic |
TCAAGAACCATTTCTGAGGC+CGG | 0.534612 | 2_1:-25346368 | None:intergenic |
GGAGTTCCTGAAGCTAATGT+TGG | 0.540614 | 2_1:+25347405 | Msa0202740:CDS |
AAGACAATTGGCAAGACCAA+TGG | 0.541489 | 2_1:+25347334 | Msa0202740:CDS |
TTGCTGTCTATGATGGACAT+GGG | 0.542095 | 2_1:+25346912 | Msa0202740:CDS |
ACTAAAGTTTGCAGTTTACA+GGG | 0.553055 | 2_1:+25348851 | Msa0202740:three_prime_UTR |
CTGTTTGCAGCCTAATAGAG+AGG | 0.555547 | 2_1:+25347684 | Msa0202740:intron |
GGATAGAAGCTGCAGGAGGA+AGG | 0.556808 | 2_1:+25347719 | Msa0202740:CDS |
GTTTCTCGTCAGTTATTGGA+AGG | 0.557259 | 2_1:+25346774 | Msa0202740:CDS |
TCATCCATTAGCATCATTGA+AGG | 0.561946 | 2_1:-25346848 | None:intergenic |
AAAACATATACCGTTACAGA+TGG | 0.563022 | 2_1:-25349096 | None:intergenic |
GTGATAAATACTTGAAACCA+TGG | 0.570632 | 2_1:+25348390 | Msa0202740:CDS |
GTTGGAAAGAACGGTAATGA+CGG | 0.571896 | 2_1:+25347423 | Msa0202740:CDS |
GGATACCTCAGTTTAAGATA+AGG | 0.573422 | 2_1:+25348872 | Msa0202740:three_prime_UTR |
GACTGTTGGATCAACTGCAC+TGG | 0.576326 | 2_1:+25347482 | Msa0202740:CDS |
CTGCCAAAACACCAAGAACT+CGG | 0.579215 | 2_1:-25347762 | None:intergenic |
TGGGAAAGGATAGAAGCTGC+AGG | 0.580421 | 2_1:+25347712 | Msa0202740:CDS |
TATGGAGGAAATAAGTTCGA+CGG | 0.581142 | 2_1:+25346100 | Msa0202740:exon |
TTGAGTAATACTCCTCTCTA+CGG | 0.583420 | 2_1:+25346752 | Msa0202740:CDS |
GAAGCTAATGTTGGAAAGAA+CGG | 0.583497 | 2_1:+25347414 | Msa0202740:CDS |
TGACAACCCTCAATTGAAGC+AGG | 0.583524 | 2_1:-25346239 | None:intergenic |
AAAGAAAAGAAAACTTATGG+AGG | 0.585164 | 2_1:+25346085 | Msa0202740:exon |
ATAGAGAGGATGAGTGGGAA+AGG | 0.585514 | 2_1:+25347698 | Msa0202740:CDS |
TGCTGTCTATGATGGACATG+GGG | 0.588722 | 2_1:+25346913 | Msa0202740:CDS |
GCCTAATAGAGAGGATGAGT+GGG | 0.605556 | 2_1:+25347693 | Msa0202740:intron |
TACAGATGGACTTCAGACAT+TGG | 0.612317 | 2_1:-25349082 | None:intergenic |
ACTGATATTTGTTGATGTTG+CGG | 0.614674 | 2_1:-25346308 | None:intergenic |
TCAAGAGCGGTCTTGTGTCG+AGG | 0.616228 | 2_1:+25347552 | Msa0202740:CDS |
AGCCTAATAGAGAGGATGAG+TGG | 0.617555 | 2_1:+25347692 | Msa0202740:intron |
TCTGTTGGAAGTGGTGAAGA+CGG | 0.623681 | 2_1:+25346269 | Msa0202740:CDS |
GAAGATAGAAGCATCTCAGA+TGG | 0.623729 | 2_1:+25346647 | Msa0202740:CDS |
TGAGGAGTTCAAGACAGCTA+AGG | 0.625755 | 2_1:+25346415 | Msa0202740:CDS |
GTATCAACCGGGCAAGACCA+AGG | 0.626468 | 2_1:+25348575 | Msa0202740:CDS |
TGTCTGAAGTCCATCTGTAA+CGG | 0.626563 | 2_1:+25349086 | Msa0202740:three_prime_UTR |
ACTTTCAAGAACCATTTCTG+AGG | 0.627956 | 2_1:-25346372 | None:intergenic |
GAATGAGCTAGTGTCGAACA+CGG | 0.636472 | 2_1:+25346598 | Msa0202740:CDS |
TGATACCTTATCTTAAACTG+AGG | 0.636810 | 2_1:-25348877 | None:intergenic |
GTCAACAGTGACAAATCACA+TGG | 0.644656 | 2_1:+25346163 | Msa0202740:CDS |
CACGGTTGATGATAATATCG+AGG | 0.649591 | 2_1:+25346559 | Msa0202740:CDS |
GGAAGGATCATACAATGGAA+CGG | 0.649681 | 2_1:+25347736 | Msa0202740:CDS |
GAACACACCGAATACTGTCA+CGG | 0.654943 | 2_1:+25346541 | Msa0202740:CDS |
GCTACTAACAGAAGATTGCG+AGG | 0.655666 | 2_1:-25346462 | None:intergenic |
ATTTGGCATAAGAAGAACGA+CGG | 0.655741 | 2_1:+25348545 | Msa0202740:CDS |
CAGGAGGAAGGATCATACAA+TGG | 0.657395 | 2_1:+25347731 | Msa0202740:CDS |
ACGGAACCAATGTATCAACC+GGG | 0.670657 | 2_1:+25348564 | Msa0202740:CDS |
AGTGTCTTTCGAGGTTAACG+AGG | 0.672111 | 2_1:+25346328 | Msa0202740:CDS |
TGAATCAAAACCGATTGCTG+CGG | 0.676589 | 2_1:+25346673 | Msa0202740:CDS |
TTAAGATAAGGTATCACCTG+AGG | 0.678198 | 2_1:+25348884 | Msa0202740:three_prime_UTR |
ACTGACGAGAAACCGTAGAG+AGG | 0.683176 | 2_1:-25346764 | None:intergenic |
GAAAGGATAGAAGCTGCAGG+AGG | 0.708767 | 2_1:+25347715 | Msa0202740:CDS |
GAATTGTGGTGATTCAAGAG+CGG | 0.718429 | 2_1:+25347539 | Msa0202740:CDS |
GCTGTCTATGATGGACATGG+GGG | 0.744893 | 2_1:+25346914 | Msa0202740:CDS |
CGGATCAGAGTTAAGCACCG+AGG | 0.771642 | 2_1:+25347443 | Msa0202740:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAAAAGAAACGAATTTTTT+CGG | - | chr2_1:25347008-25347027 | None:intergenic | 15.0% |
!! | TTAAGAGCAATAATATTTAT+TGG | + | chr2_1:25347133-25347152 | Msa0202740:intron | 15.0% |
!!! | TATATGTTAATTACATTTTG+TGG | - | chr2_1:25348255-25348274 | None:intergenic | 15.0% |
!!! | ATAATGTAGAATTTTGATTT+GGG | - | chr2_1:25348915-25348934 | None:intergenic | 15.0% |
!!! | AATAATGTAGAATTTTGATT+TGG | - | chr2_1:25348916-25348935 | None:intergenic | 15.0% |
!! | TTTAAAAAAAATAAGGTTAC+AGG | - | chr2_1:25348997-25349016 | None:intergenic | 15.0% |
!! | TAAAAATTATAGGATTCTAG+AGG | + | chr2_1:25346046-25346065 | Msa0202740:five_prime_UTR | 20.0% |
!! | TAGAAAGAAAAGAAAACTTA+TGG | + | chr2_1:25346082-25346101 | Msa0202740:exon | 20.0% |
!! | ATTAAATTCCCAATTGAAAA+TGG | - | chr2_1:25346134-25346153 | None:intergenic | 20.0% |
!! | AAATATACACTTGAAAATTG+TGG | - | chr2_1:25348116-25348135 | None:intergenic | 20.0% |
!! | TATATTTGAATTTCGAATAC+TGG | + | chr2_1:25348166-25348185 | Msa0202740:intron | 20.0% |
! | AAAGAAAAGAAAACTTATGG+AGG | + | chr2_1:25346085-25346104 | Msa0202740:exon | 25.0% |
!!! | CTCTCTGAAATAAATAACTA+AGG | - | chr2_1:25347084-25347103 | None:intergenic | 25.0% |
! | TTTATTTCAGAGAGAGAAAT+AGG | + | chr2_1:25347090-25347109 | Msa0202740:intron | 25.0% |
!!! | ATTTATTGGTTTTTCCAGAA+AGG | + | chr2_1:25347147-25347166 | Msa0202740:intron | 25.0% |
!!! | CCAATTGTCTTTTTCATTTT+CGG | - | chr2_1:25347325-25347344 | None:intergenic | 25.0% |
!!! | ATCTACTTTTTGAAAGCAAT+TGG | - | chr2_1:25347373-25347392 | None:intergenic | 25.0% |
! | GATGGTTAACAAATATAACA+AGG | - | chr2_1:25348233-25348252 | None:intergenic | 25.0% |
!! | TGTTAATTACATTTTGTGGA+TGG | - | chr2_1:25348251-25348270 | None:intergenic | 25.0% |
! | ACAAAAGACATAAATTTCGA+TGG | - | chr2_1:25348293-25348312 | None:intergenic | 25.0% |
! | AGATGAGTATAAACTCAATA+TGG | - | chr2_1:25348333-25348352 | None:intergenic | 25.0% |
!! | AATTTTTGATAGACATTCTG+CGG | - | chr2_1:25348624-25348643 | None:intergenic | 25.0% |
! | CCTTATGAAAAAAATATCCA+GGG | - | chr2_1:25348817-25348836 | None:intergenic | 25.0% |
!!! | CCTGGATATTTTTTTCATAA+GGG | + | chr2_1:25348815-25348834 | Msa0202740:three_prime_UTR | 25.0% |
! | TTATAGGATTCTAGAGGATA+AGG | + | chr2_1:25346052-25346071 | Msa0202740:five_prime_UTR | 30.0% |
ACAAATCACATGGAAATAAC+TGG | + | chr2_1:25346173-25346192 | Msa0202740:CDS | 30.0% | |
ATTAAATCCTGCTTCAATTG+AGG | + | chr2_1:25346232-25346251 | Msa0202740:CDS | 30.0% | |
TTAAATCCTGCTTCAATTGA+GGG | + | chr2_1:25346233-25346252 | Msa0202740:CDS | 30.0% | |
! | ACTGATATTTGTTGATGTTG+CGG | - | chr2_1:25346311-25346330 | None:intergenic | 30.0% |
!!! | CAGTTTTGAAAGAAATGATG+AGG | + | chr2_1:25346397-25346416 | Msa0202740:CDS | 30.0% |
AATATCGAGGATGATAAGTA+TGG | + | chr2_1:25346572-25346591 | Msa0202740:CDS | 30.0% | |
! | AACAAGCTGTGATAATGATT+TGG | + | chr2_1:25346727-25346746 | Msa0202740:CDS | 30.0% |
! | CTTTTGTGTTTTCATTCACA+TGG | - | chr2_1:25346874-25346893 | None:intergenic | 30.0% |
AATTGACAGGAAGGAATTTA+AGG | - | chr2_1:25346952-25346971 | None:intergenic | 30.0% | |
ATCACACAAACTTGGTAAAT+GGG | - | chr2_1:25347219-25347238 | None:intergenic | 30.0% | |
! | AAGATGTTTCTGACAGTAAT+TGG | - | chr2_1:25347256-25347275 | None:intergenic | 30.0% |
CCGAAAATGAAAAAGACAAT+TGG | + | chr2_1:25347322-25347341 | Msa0202740:CDS | 30.0% | |
AAAGTAGATGATGTGATTGT+AGG | + | chr2_1:25347384-25347403 | Msa0202740:CDS | 30.0% | |
!! | ACTTTTTGGTCAATAGACAA+TGG | - | chr2_1:25347591-25347610 | None:intergenic | 30.0% |
TGTCTATTGACCAAAAAGTA+AGG | + | chr2_1:25347592-25347611 | Msa0202740:intron | 30.0% | |
!! | GAAACAAATGCCTTACTTTT+TGG | - | chr2_1:25347605-25347624 | None:intergenic | 30.0% |
! | TTGTTTCACAATTTGTTTGC+TGG | + | chr2_1:25347618-25347637 | Msa0202740:intron | 30.0% |
GTTAACGATGTTCAAAATTG+TGG | - | chr2_1:25348094-25348113 | None:intergenic | 30.0% | |
ATTTCGAATACTGGAAATTG+CGG | + | chr2_1:25348175-25348194 | Msa0202740:intron | 30.0% | |
GTGATAAATACTTGAAACCA+TGG | + | chr2_1:25348390-25348409 | Msa0202740:CDS | 30.0% | |
TCAAAAATTGCTCATCAAAG+AGG | + | chr2_1:25348635-25348654 | Msa0202740:CDS | 30.0% | |
! | AGTTATTGTTATTGACCTGA+AGG | + | chr2_1:25348676-25348695 | Msa0202740:CDS | 30.0% |
CTAGTATATTTATTTAGCCC+TGG | + | chr2_1:25348797-25348816 | Msa0202740:three_prime_UTR | 30.0% | |
!!! | CCCTGGATATTTTTTTCATA+AGG | + | chr2_1:25348814-25348833 | Msa0202740:three_prime_UTR | 30.0% |
CCCTTATGAAAAAAATATCC+AGG | - | chr2_1:25348818-25348837 | None:intergenic | 30.0% | |
TACTAAAGTTTGCAGTTTAC+AGG | + | chr2_1:25348850-25348869 | Msa0202740:three_prime_UTR | 30.0% | |
ACTAAAGTTTGCAGTTTACA+GGG | + | chr2_1:25348851-25348870 | Msa0202740:three_prime_UTR | 30.0% | |
TGATACCTTATCTTAAACTG+AGG | - | chr2_1:25348880-25348899 | None:intergenic | 30.0% | |
AAAACATATACCGTTACAGA+TGG | - | chr2_1:25349099-25349118 | None:intergenic | 30.0% | |
TATGGAGGAAATAAGTTCGA+CGG | + | chr2_1:25346100-25346119 | Msa0202740:exon | 35.0% | |
!!! | TTGCAGTGCCATTTTCAATT+GGG | + | chr2_1:25346123-25346142 | Msa0202740:CDS | 35.0% |
ACAAATATCAGTGTCTTTCG+AGG | + | chr2_1:25346319-25346338 | Msa0202740:CDS | 35.0% | |
ACTTTCAAGAACCATTTCTG+AGG | - | chr2_1:25346375-25346394 | None:intergenic | 35.0% | |
! | TAGCAAAAGCAGTCCTTTTA+CGG | + | chr2_1:25346481-25346500 | Msa0202740:CDS | 35.0% |
TTGAGTAATACTCCTCTCTA+CGG | + | chr2_1:25346752-25346771 | Msa0202740:CDS | 35.0% | |
TATTGGAAGGAGACAAGAAA+TGG | + | chr2_1:25346787-25346806 | Msa0202740:CDS | 35.0% | |
!! | GAAGGTACTTGAAAAAGTTG+AGG | - | chr2_1:25346833-25346852 | None:intergenic | 35.0% |
AGTACCTTCAATGATGCTAA+TGG | + | chr2_1:25346844-25346863 | Msa0202740:CDS | 35.0% | |
TCATCCATTAGCATCATTGA+AGG | - | chr2_1:25346851-25346870 | None:intergenic | 35.0% | |
!!! | CACTTTTTTGCTGTCTATGA+TGG | + | chr2_1:25346905-25346924 | Msa0202740:CDS | 35.0% |
AAGTGACAGTTAAAAAGGAG+CGG | - | chr2_1:25346982-25347001 | None:intergenic | 35.0% | |
GGCAAAAGTGACAGTTAAAA+AGG | - | chr2_1:25346987-25347006 | None:intergenic | 35.0% | |
!! | TTGGTTTTTCCAGAAAGGAA+CGG | + | chr2_1:25347152-25347171 | Msa0202740:intron | 35.0% |
AAAGGAACGGAGAGAATATA+CGG | + | chr2_1:25347165-25347184 | Msa0202740:intron | 35.0% | |
CATCACACAAACTTGGTAAA+TGG | - | chr2_1:25347220-25347239 | None:intergenic | 35.0% | |
CATTTACCAAGTTTGTGTGA+TGG | + | chr2_1:25347218-25347237 | Msa0202740:intron | 35.0% | |
! | GAAACATCTTCACTCAGTTT+TGG | + | chr2_1:25347266-25347285 | Msa0202740:CDS | 35.0% |
! | TTCTTTCCAACATTAGCTTC+AGG | - | chr2_1:25347414-25347433 | None:intergenic | 35.0% |
GAAGCTAATGTTGGAAAGAA+CGG | + | chr2_1:25347414-25347433 | Msa0202740:CDS | 35.0% | |
CACAATTCGCAACTATTATG+TGG | - | chr2_1:25347527-25347546 | None:intergenic | 35.0% | |
CACATAATAGTTGCGAATTG+TGG | + | chr2_1:25347525-25347544 | Msa0202740:CDS | 35.0% | |
TGCAGTAAAACACATACCTA+TGG | - | chr2_1:25347797-25347816 | None:intergenic | 35.0% | |
GAGTGCTTAATTACGTTTAG+TGG | + | chr2_1:25348009-25348028 | Msa0202740:intron | 35.0% | |
GCTTAATTACGTTTAGTGGA+TGG | + | chr2_1:25348013-25348032 | Msa0202740:intron | 35.0% | |
AAATTGCGGTCATGTATATG+TGG | + | chr2_1:25348189-25348208 | Msa0202740:intron | 35.0% | |
TATACTCATCTTTGCTGAAG+TGG | + | chr2_1:25348342-25348361 | Msa0202740:intron | 35.0% | |
TTCAAGTATTTATCACCTGG+TGG | - | chr2_1:25348386-25348405 | None:intergenic | 35.0% | |
! | GGTTTCAAGTATTTATCACC+TGG | - | chr2_1:25348389-25348408 | None:intergenic | 35.0% |
CGTTCTTCTTATGCCAAATA+AGG | - | chr2_1:25348544-25348563 | None:intergenic | 35.0% | |
ATTTGGCATAAGAAGAACGA+CGG | + | chr2_1:25348545-25348564 | Msa0202740:CDS | 35.0% | |
! | GGATACCTCAGTTTAAGATA+AGG | + | chr2_1:25348872-25348891 | Msa0202740:three_prime_UTR | 35.0% |
! | TTAAGATAAGGTATCACCTG+AGG | + | chr2_1:25348884-25348903 | Msa0202740:three_prime_UTR | 35.0% |
!!! | GTTGCAGTGCCATTTTCAAT+TGG | + | chr2_1:25346122-25346141 | Msa0202740:CDS | 40.0% |
GTCAACAGTGACAAATCACA+TGG | + | chr2_1:25346163-25346182 | Msa0202740:CDS | 40.0% | |
! | GGTTGTCAGTCTTTTTCTGT+TGG | + | chr2_1:25346254-25346273 | Msa0202740:CDS | 40.0% |
! | CAGTCTTTTTCTGTTGGAAG+TGG | + | chr2_1:25346260-25346279 | Msa0202740:CDS | 40.0% |
! | AGCAAAAGCAGTCCTTTTAC+GGG | + | chr2_1:25346482-25346501 | Msa0202740:CDS | 40.0% |
TCATCAACCGTGACAGTATT+CGG | - | chr2_1:25346551-25346570 | None:intergenic | 40.0% | |
!! | CACGGTTGATGATAATATCG+AGG | + | chr2_1:25346559-25346578 | Msa0202740:CDS | 40.0% |
!! | GAAGATAGAAGCATCTCAGA+TGG | + | chr2_1:25346647-25346666 | Msa0202740:CDS | 40.0% |
TGAATCAAAACCGATTGCTG+CGG | + | chr2_1:25346673-25346692 | Msa0202740:CDS | 40.0% | |
TACGGTTTCTCGTCAGTTAT+TGG | + | chr2_1:25346770-25346789 | Msa0202740:CDS | 40.0% | |
GTTTCTCGTCAGTTATTGGA+AGG | + | chr2_1:25346774-25346793 | Msa0202740:CDS | 40.0% | |
! | GACAGCAAAAAAGTGTGCTA+GGG | - | chr2_1:25346900-25346919 | None:intergenic | 40.0% |
! | AGACAGCAAAAAAGTGTGCT+AGG | - | chr2_1:25346901-25346920 | None:intergenic | 40.0% |
!! | TTTGCTGTCTATGATGGACA+TGG | + | chr2_1:25346911-25346930 | Msa0202740:CDS | 40.0% |
!! | TTGCTGTCTATGATGGACAT+GGG | + | chr2_1:25346912-25346931 | Msa0202740:CDS | 40.0% |
GAGAGAGAAATAGGTAGACT+TGG | + | chr2_1:25347099-25347118 | Msa0202740:intron | 40.0% | |
ATATTCTCTCCGTTCCTTTC+TGG | - | chr2_1:25347164-25347183 | None:intergenic | 40.0% | |
ATGAAGCCATCACACAAACT+TGG | - | chr2_1:25347227-25347246 | None:intergenic | 40.0% | |
AGTTTGTGTGATGGCTTCAT+AGG | + | chr2_1:25347227-25347246 | Msa0202740:intron | 40.0% | |
!!! | TCTTCACTCAGTTTTGGTTG+AGG | + | chr2_1:25347272-25347291 | Msa0202740:CDS | 40.0% |
AAGACAATTGGCAAGACCAA+TGG | + | chr2_1:25347334-25347353 | Msa0202740:CDS | 40.0% | |
TGGTGAGTACTTTCTTCCAT+TGG | - | chr2_1:25347353-25347372 | None:intergenic | 40.0% | |
GTTGGAAAGAACGGTAATGA+CGG | + | chr2_1:25347423-25347442 | Msa0202740:CDS | 40.0% | |
GAATTGTGGTGATTCAAGAG+CGG | + | chr2_1:25347539-25347558 | Msa0202740:CDS | 40.0% | |
GGAAGGATCATACAATGGAA+CGG | + | chr2_1:25347736-25347755 | Msa0202740:CDS | 40.0% | |
!!! | ATACCGAGTTCTTGGTGTTT+TGG | + | chr2_1:25347759-25347778 | Msa0202740:CDS | 40.0% |
TTGTGGTTGATTGTGTCCAA+TGG | - | chr2_1:25348077-25348096 | None:intergenic | 40.0% | |
! | TTTTCTTCATATCCACCACC+AGG | + | chr2_1:25348368-25348387 | Msa0202740:intron | 40.0% |
AAGTATTTATCACCTGGTGG+TGG | - | chr2_1:25348383-25348402 | None:intergenic | 40.0% | |
! | TCTGGATCTGGAATTATCCA+TGG | - | chr2_1:25348410-25348429 | None:intergenic | 40.0% |
ACAAACTTGACTTCTGGATC+TGG | - | chr2_1:25348422-25348441 | None:intergenic | 40.0% | |
! | AACCATCACTGGCTAGAATA+AGG | - | chr2_1:25348469-25348488 | None:intergenic | 40.0% |
TTCTAGCCAGTGATGGTTTA+TGG | + | chr2_1:25348471-25348490 | Msa0202740:CDS | 40.0% | |
TCTAGCCAGTGATGGTTTAT+GGG | + | chr2_1:25348472-25348491 | Msa0202740:CDS | 40.0% | |
CTCGAAAGCGAATCCTTATT+TGG | + | chr2_1:25348528-25348547 | Msa0202740:CDS | 40.0% | |
!! | TTTGATTTGGGAAGATCCTC+AGG | - | chr2_1:25348903-25348922 | None:intergenic | 40.0% |
! | TACAGATGGACTTCAGACAT+TGG | - | chr2_1:25349085-25349104 | None:intergenic | 40.0% |
! | TGTCTGAAGTCCATCTGTAA+CGG | + | chr2_1:25349086-25349105 | Msa0202740:three_prime_UTR | 40.0% |
TGACAACCCTCAATTGAAGC+AGG | - | chr2_1:25346242-25346261 | None:intergenic | 45.0% | |
TCTGTTGGAAGTGGTGAAGA+CGG | + | chr2_1:25346269-25346288 | Msa0202740:CDS | 45.0% | |
AGTGTCTTTCGAGGTTAACG+AGG | + | chr2_1:25346328-25346347 | Msa0202740:CDS | 45.0% | |
!! | TCAAGAACCATTTCTGAGGC+CGG | - | chr2_1:25346371-25346390 | None:intergenic | 45.0% |
TGAGGAGTTCAAGACAGCTA+AGG | + | chr2_1:25346415-25346434 | Msa0202740:CDS | 45.0% | |
GCTACTAACAGAAGATTGCG+AGG | - | chr2_1:25346465-25346484 | None:intergenic | 45.0% | |
! | GCAAAAGCAGTCCTTTTACG+GGG | + | chr2_1:25346483-25346502 | Msa0202740:CDS | 45.0% |
! | CAAAAGCAGTCCTTTTACGG+GGG | + | chr2_1:25346484-25346503 | Msa0202740:CDS | 45.0% |
GAACACACCGAATACTGTCA+CGG | + | chr2_1:25346541-25346560 | Msa0202740:CDS | 45.0% | |
! | GAATGAGCTAGTGTCGAACA+CGG | + | chr2_1:25346598-25346617 | Msa0202740:CDS | 45.0% |
!!! | GCAGCAATCGGTTTTGATTC+AGG | - | chr2_1:25346674-25346693 | None:intergenic | 45.0% |
ATCTCATGAACCGCAGCAAT+CGG | - | chr2_1:25346686-25346705 | None:intergenic | 45.0% | |
!! | TGCTGTCTATGATGGACATG+GGG | + | chr2_1:25346913-25346932 | Msa0202740:CDS | 45.0% |
GGAGAGAGTAATTGACAGGA+AGG | - | chr2_1:25346961-25346980 | None:intergenic | 45.0% | |
GGAGTTCCTGAAGCTAATGT+TGG | + | chr2_1:25347405-25347424 | Msa0202740:CDS | 45.0% | |
AAGCTGAAGTGATCTGATGC+AGG | + | chr2_1:25347649-25347668 | Msa0202740:intron | 45.0% | |
CTCTCTATTAGGCTGCAAAC+AGG | - | chr2_1:25347686-25347705 | None:intergenic | 45.0% | |
CTGTTTGCAGCCTAATAGAG+AGG | + | chr2_1:25347684-25347703 | Msa0202740:intron | 45.0% | |
AGCCTAATAGAGAGGATGAG+TGG | + | chr2_1:25347692-25347711 | Msa0202740:intron | 45.0% | |
GCCTAATAGAGAGGATGAGT+GGG | + | chr2_1:25347693-25347712 | Msa0202740:intron | 45.0% | |
TCCCACTCATCCTCTCTATT+AGG | - | chr2_1:25347697-25347716 | None:intergenic | 45.0% | |
ATAGAGAGGATGAGTGGGAA+AGG | + | chr2_1:25347698-25347717 | Msa0202740:CDS | 45.0% | |
CAGGAGGAAGGATCATACAA+TGG | + | chr2_1:25347731-25347750 | Msa0202740:CDS | 45.0% | |
CTGCCAAAACACCAAGAACT+CGG | - | chr2_1:25347765-25347784 | None:intergenic | 45.0% | |
ACAACTCATTGACCGTCCAT+TGG | + | chr2_1:25348058-25348077 | Msa0202740:intron | 45.0% | |
GGTTGATTGTGTCCAATGGA+CGG | - | chr2_1:25348073-25348092 | None:intergenic | 45.0% | |
! | TGCCTTATTCTAGCCAGTGA+TGG | + | chr2_1:25348464-25348483 | Msa0202740:CDS | 45.0% |
CACATCCCATAAACCATCAC+TGG | - | chr2_1:25348480-25348499 | None:intergenic | 45.0% | |
GACGGAACCAATGTATCAAC+CGG | + | chr2_1:25348563-25348582 | Msa0202740:CDS | 45.0% | |
ACGGAACCAATGTATCAACC+GGG | + | chr2_1:25348564-25348583 | Msa0202740:CDS | 45.0% | |
!!! | TACAAATTTTAAAAAAAATA+AGG | - | chr2_1:25349004-25349023 | None:intergenic | 5.0% |
! | GGATCAAGTTGCAGCTGAAC+CGG | + | chr2_1:25346349-25346368 | Msa0202740:CDS | 50.0% |
ACTGACGAGAAACCGTAGAG+AGG | - | chr2_1:25346767-25346786 | None:intergenic | 50.0% | |
!! | GCTGTCTATGATGGACATGG+GGG | + | chr2_1:25346914-25346933 | Msa0202740:CDS | 50.0% |
GAGCGGAGAGAGTAATTGAC+AGG | - | chr2_1:25346965-25346984 | None:intergenic | 50.0% | |
CTCAGGAGCAAGAGTTTCCT+CGG | - | chr2_1:25347463-25347482 | None:intergenic | 50.0% | |
ACTCTTGCTCCTGAGACTGT+TGG | + | chr2_1:25347468-25347487 | Msa0202740:CDS | 50.0% | |
GCAGTTGATCCAACAGTCTC+AGG | - | chr2_1:25347480-25347499 | None:intergenic | 50.0% | |
GACTGTTGGATCAACTGCAC+TGG | + | chr2_1:25347482-25347501 | Msa0202740:CDS | 50.0% | |
TGGGAAAGGATAGAAGCTGC+AGG | + | chr2_1:25347712-25347731 | Msa0202740:CDS | 50.0% | |
GAAAGGATAGAAGCTGCAGG+AGG | + | chr2_1:25347715-25347734 | Msa0202740:CDS | 50.0% | |
TGGAACGGATACCGAGTTCT+TGG | + | chr2_1:25347751-25347770 | Msa0202740:CDS | 50.0% | |
! | TTGGCAGTGTCGAGATCCAT+AGG | + | chr2_1:25347778-25347797 | Msa0202740:CDS | 50.0% |
CGGAGGACAAACTTGACTTC+TGG | - | chr2_1:25348428-25348447 | None:intergenic | 50.0% | |
!!! | ACTCGTCGTTTTTCTCTCGG+AGG | - | chr2_1:25348445-25348464 | None:intergenic | 50.0% |
!!! | GGCACTCGTCGTTTTTCTCT+CGG | - | chr2_1:25348448-25348467 | None:intergenic | 50.0% |
! | GTCTTGCCCGGTTGATACAT+TGG | - | chr2_1:25348573-25348592 | None:intergenic | 50.0% |
!! | ATCAACTCCTTGGTCTTGCC+CGG | - | chr2_1:25348585-25348604 | None:intergenic | 50.0% |
TGAACTGTCTCTGAGCCTTC+AGG | - | chr2_1:25348694-25348713 | None:intergenic | 50.0% | |
! | GATGGACTTCAGACATTGGC+AGG | - | chr2_1:25349081-25349100 | None:intergenic | 50.0% |
AGCTGAACCGGCCTCAGAAA+TGG | + | chr2_1:25346361-25346380 | Msa0202740:CDS | 55.0% | |
ACTGCAGACTCCCCCGTAAA+AGG | - | chr2_1:25346497-25346516 | None:intergenic | 55.0% | |
! | TGATGGACATGGGGGAAGTC+AGG | + | chr2_1:25346922-25346941 | Msa0202740:CDS | 55.0% |
! | CGGATCAGAGTTAAGCACCG+AGG | + | chr2_1:25347443-25347462 | Msa0202740:CDS | 55.0% |
! | TCAAGAGCGGTCTTGTGTCG+AGG | + | chr2_1:25347552-25347571 | Msa0202740:CDS | 55.0% |
GGATAGAAGCTGCAGGAGGA+AGG | + | chr2_1:25347719-25347738 | Msa0202740:CDS | 55.0% | |
GTATCAACCGGGCAAGACCA+AGG | + | chr2_1:25348575-25348594 | Msa0202740:CDS | 55.0% | |
GAGCTGCAGGATCAACTCCT+TGG | - | chr2_1:25348595-25348614 | None:intergenic | 55.0% | |
TCTGCGGCATAATGAGCTGC+AGG | - | chr2_1:25348608-25348627 | None:intergenic | 55.0% | |
CGGGGGAGTCTGCAGTTTCG+AGG | + | chr2_1:25346501-25346520 | Msa0202740:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 25346041 | 25349135 | 25346041 | ID=Msa0202740;Name=Msa0202740 |
chr2_1 | mRNA | 25346041 | 25349135 | 25346041 | ID=Msa0202740-mRNA-1;Parent=Msa0202740;Name=Msa0202740-mRNA-1;_AED=0.03;_eAED=0.03;_QI=60|1|1|1|1|1|4|408|548 |
chr2_1 | exon | 25346041 | 25346943 | 25346041 | ID=Msa0202740-mRNA-1:exon:9699;Parent=Msa0202740-mRNA-1 |
chr2_1 | exon | 25347249 | 25347608 | 25347249 | ID=Msa0202740-mRNA-1:exon:9700;Parent=Msa0202740-mRNA-1 |
chr2_1 | exon | 25347694 | 25347799 | 25347694 | ID=Msa0202740-mRNA-1:exon:9701;Parent=Msa0202740-mRNA-1 |
chr2_1 | exon | 25348390 | 25349135 | 25348390 | ID=Msa0202740-mRNA-1:exon:9702;Parent=Msa0202740-mRNA-1 |
chr2_1 | five_prime_UTR | 25346041 | 25346100 | 25346041 | ID=Msa0202740-mRNA-1:five_prime_utr;Parent=Msa0202740-mRNA-1 |
chr2_1 | CDS | 25346101 | 25346943 | 25346101 | ID=Msa0202740-mRNA-1:cds;Parent=Msa0202740-mRNA-1 |
chr2_1 | CDS | 25347249 | 25347608 | 25347249 | ID=Msa0202740-mRNA-1:cds;Parent=Msa0202740-mRNA-1 |
chr2_1 | CDS | 25347694 | 25347799 | 25347694 | ID=Msa0202740-mRNA-1:cds;Parent=Msa0202740-mRNA-1 |
chr2_1 | CDS | 25348390 | 25348727 | 25348390 | ID=Msa0202740-mRNA-1:cds;Parent=Msa0202740-mRNA-1 |
chr2_1 | three_prime_UTR | 25348728 | 25349135 | 25348728 | ID=Msa0202740-mRNA-1:three_prime_utr;Parent=Msa0202740-mRNA-1 |
Gene Sequence |
Protein sequence |