Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258730 | XP_003608884.1 | 94.845 | 194 | 8 | 1 | 1 | 194 | 1 | 192 | 3.36e-125 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258730 | sp|P47923|NDK2_PEA | 83.590 | 195 | 28 | 3 | 1 | 194 | 1 | 192 | 1.57e-108 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0049990 | Msa1258730 | 0.803571 | 3.271041e-49 | -8.615850e-47 |
| Msa0092660 | Msa1258730 | 0.825944 | 3.555229e-54 | -8.615850e-47 |
| Msa0092680 | Msa1258730 | 0.815173 | 1.058522e-51 | -8.615850e-47 |
| Msa0092730 | Msa1258730 | 0.837470 | 5.101841e-57 | -8.615850e-47 |
| Msa0094700 | Msa1258730 | 0.809075 | 2.263360e-50 | -8.615850e-47 |
| Msa0105210 | Msa1258730 | 0.804772 | 1.840299e-49 | -8.615850e-47 |
| Msa0112290 | Msa1258730 | 0.813124 | 2.999554e-51 | -8.615850e-47 |
| Msa0115010 | Msa1258730 | 0.801574 | 8.445763e-49 | -8.615850e-47 |
| Msa0629500 | Msa1258730 | 0.832607 | 8.582953e-56 | -8.615850e-47 |
| Msa0637850 | Msa1258730 | 0.809112 | 2.222955e-50 | -8.615850e-47 |
| Msa0703760 | Msa1258730 | 0.812064 | 5.115883e-51 | -8.615850e-47 |
| Msa0770430 | Msa1258730 | 0.806345 | 8.607112e-50 | -8.615850e-47 |
| Msa0790180 | Msa1258730 | 0.827413 | 1.586069e-54 | -8.615850e-47 |
| Msa0137600 | Msa1258730 | 0.836759 | 7.750356e-57 | -8.615850e-47 |
| Msa0173760 | Msa1258730 | 0.802531 | 5.367857e-49 | -8.615850e-47 |
| Msa0175280 | Msa1258730 | 0.824201 | 9.174027e-54 | -8.615850e-47 |
| Msa0181010 | Msa1258730 | 0.800297 | 1.539555e-48 | -8.615850e-47 |
| Msa0181020 | Msa1258730 | 0.822908 | 1.841358e-53 | -8.615850e-47 |
| Msa0206940 | Msa1258730 | 0.825762 | 3.928450e-54 | -8.615850e-47 |
| Msa0235180 | Msa1258730 | 0.848002 | 8.085961e-60 | -8.615850e-47 |
| Msa1234960 | Msa1258730 | 0.801122 | 1.045160e-48 | -8.615850e-47 |
| Msa1258730 | Msa1259470 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
| Msa1258730 | Msa1264560 | 0.821525 | 3.855277e-53 | -8.615850e-47 |
| Msa1258730 | Msa1305520 | 0.815755 | 7.856390e-52 | -8.615850e-47 |
| Msa1258730 | Msa1305650 | 0.804230 | 2.386784e-49 | -8.615850e-47 |
| Msa1258730 | Msa1309360 | 0.803569 | 3.274916e-49 | -8.615850e-47 |
| Msa1258730 | Msa1374850 | 0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa1258730 | Msa1406550 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa1258730 | Msa1406880 | 0.800274 | 1.556053e-48 | -8.615850e-47 |
| Msa1258730 | Msa1407710 | 0.805729 | 1.160065e-49 | -8.615850e-47 |
| Msa1258730 | Msa1412520 | 0.817061 | 4.008743e-52 | -8.615850e-47 |
| Msa1258730 | Msa1415250 | 0.830861 | 2.313255e-55 | -8.615850e-47 |
| Msa1258730 | Msa1418600 | 0.834211 | 3.416457e-56 | -8.615850e-47 |
| Msa1258730 | Msa1422500 | 0.801132 | 1.040285e-48 | -8.615850e-47 |
| Msa1258730 | Msa1430760 | 0.815103 | 1.097395e-51 | -8.615850e-47 |
| Msa1258730 | Msa1437320 | 0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0367370 | Msa1258730 | 0.822310 | 2.537214e-53 | -8.615850e-47 |
| Msa0379390 | Msa1258730 | 0.824457 | 7.988188e-54 | -8.615850e-47 |
| Msa0380360 | Msa1258730 | 0.805871 | 1.082757e-49 | -8.615850e-47 |
| Msa0426480 | Msa1258730 | 0.808857 | 2.519922e-50 | -8.615850e-47 |
| Msa0455200 | Msa1258730 | 0.804678 | 1.924629e-49 | -8.615850e-47 |
| Msa0480150 | Msa1258730 | 0.808405 | 3.148352e-50 | -8.615850e-47 |
| Msa1067430 | Msa1258730 | 0.830245 | 3.272965e-55 | -8.615850e-47 |
| Msa1080620 | Msa1258730 | 0.842267 | 2.870810e-58 | -8.615850e-47 |
| Msa1080690 | Msa1258730 | 0.840540 | 8.174951e-58 | -8.615850e-47 |
| Msa1092430 | Msa1258730 | 0.812389 | 4.346316e-51 | -8.615850e-47 |
| Msa0250520 | Msa1258730 | 0.810118 | 1.351221e-50 | -8.615850e-47 |
| Msa0258380 | Msa1258730 | 0.821218 | 4.539127e-53 | -8.615850e-47 |
| Msa0269830 | Msa1258730 | 0.816214 | 6.207201e-52 | -8.615850e-47 |
| Msa0280140 | Msa1258730 | 0.817798 | 2.735247e-52 | -8.615850e-47 |
| Msa0308430 | Msa1258730 | 0.815286 | 9.995236e-52 | -8.615850e-47 |
| Msa0313800 | Msa1258730 | 0.835165 | 1.966921e-56 | -8.615850e-47 |
| Msa0323990 | Msa1258730 | 0.825306 | 5.037738e-54 | -8.615850e-47 |
| Msa0334780 | Msa1258730 | 0.802773 | 4.785343e-49 | -8.615850e-47 |
| Msa0334980 | Msa1258730 | 0.801225 | 9.956025e-49 | -8.615850e-47 |
| Msa0342620 | Msa1258730 | 0.800239 | 1.582236e-48 | -8.615850e-47 |
| Msa0362840 | Msa1258730 | 0.806597 | 7.616121e-50 | -8.615850e-47 |
| Msa1126310 | Msa1258730 | 0.815474 | 9.075272e-52 | -8.615850e-47 |
| Msa1167160 | Msa1258730 | 0.814436 | 1.542136e-51 | -8.615850e-47 |
| Msa1222580 | Msa1258730 | 0.817762 | 2.787659e-52 | -8.615850e-47 |
| Msa0567290 | Msa1258730 | 0.800810 | 1.210103e-48 | -8.615850e-47 |
| Msa0579610 | Msa1258730 | 0.809987 | 1.441920e-50 | -8.615850e-47 |
| Msa0589290 | Msa1258730 | 0.836247 | 1.046236e-56 | -8.615850e-47 |
| Msa0853920 | Msa1258730 | 0.805340 | 1.399804e-49 | -8.615850e-47 |
| Msa0901140 | Msa1258730 | 0.804643 | 1.957524e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258730 | MtrunA17_Chr4g0057901 | 94.845 | 194 | 8 | 1 | 1 | 194 | 1 | 192 | 3.09e-129 | 362 |
| Msa1258730 | MtrunA17_Chr8g0335791 | 69.091 | 110 | 34 | 0 | 85 | 194 | 3 | 112 | 5.33e-53 | 166 |
| Msa1258730 | MtrunA17_Chr8g0388131 | 58.036 | 112 | 47 | 0 | 83 | 194 | 83 | 194 | 1.39e-47 | 155 |
| Msa1258730 | MtrunA17_Chr8g0344421 | 27.826 | 115 | 80 | 1 | 83 | 194 | 32 | 146 | 5.19e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258730 | AT5G63310.1 | 65.574 | 183 | 60 | 2 | 13 | 194 | 13 | 193 | 1.26e-78 | 234 |
| Msa1258730 | AT4G09320.1 | 65.766 | 111 | 38 | 0 | 84 | 194 | 1 | 111 | 3.74e-52 | 164 |
| Msa1258730 | AT4G11010.1 | 49.020 | 153 | 71 | 2 | 49 | 194 | 46 | 198 | 1.34e-48 | 158 |
| Msa1258730 | AT4G23900.1 | 53.600 | 125 | 58 | 0 | 70 | 194 | 73 | 197 | 3.00e-45 | 150 |
| Msa1258730 | AT4G23895.3 | 57.143 | 112 | 48 | 0 | 83 | 194 | 316 | 427 | 5.19e-43 | 150 |
| Msa1258730 | AT1G17410.1 | 38.095 | 105 | 62 | 1 | 85 | 186 | 33 | 137 | 7.95e-16 | 72.4 |
| Msa1258730 | AT1G17410.2 | 39.000 | 100 | 58 | 1 | 90 | 186 | 1 | 100 | 1.19e-15 | 70.9 |
| Msa1258730 | AT1G17410.3 | 39.560 | 91 | 55 | 0 | 90 | 180 | 1 | 91 | 3.33e-15 | 69.3 |
Find 58 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGGGGTTTAAGTTAAT+TGG | 0.185146 | 8_2:-59959036 | Msa1258730:CDS |
| TTCGGGCCCCGTTGTGTCTA+TGG | 0.249639 | 8_2:-59957655 | Msa1258730:intron |
| CCATCAGCACGTAAGCTTAT+AGG | 0.269590 | 8_2:-59957522 | Msa1258730:CDS |
| GGAAGAAAGACTTCTGATTT+AGG | 0.280449 | 8_2:+59957700 | None:intergenic |
| CTCTCTTTGCGTTGCGGCTG+TGG | 0.282791 | 8_2:+59959586 | None:intergenic |
| AGTTGACCAAACTTACATTA+TGG | 0.307443 | 8_2:-59959223 | Msa1258730:CDS |
| AGGTGGGTGAAATTATTTCT+AGG | 0.357399 | 8_2:-59959065 | Msa1258730:CDS |
| GTTTCACCATAATGTAAGTT+TGG | 0.363615 | 8_2:+59959217 | None:intergenic |
| GGCTGTGGAACAACGTAGTT+TGG | 0.366732 | 8_2:+59959601 | None:intergenic |
| GGAGACTTTGCTGTTGAAAC+AGG | 0.369768 | 8_2:-59957459 | Msa1258730:CDS |
| CTGATTGACTATATTACTTC+GGG | 0.369900 | 8_2:-59957672 | Msa1258730:CDS |
| GGAACAACGTAGTTTGGATT+TGG | 0.370708 | 8_2:+59959607 | None:intergenic |
| AATTAAGTGGGGAAGGAAAA+TGG | 0.376190 | 8_2:+59959341 | None:intergenic |
| GGGAAGGAAAATGGCGGTAT+TGG | 0.379509 | 8_2:+59959350 | None:intergenic |
| GTAATATAGTCAATCAGCTT+AGG | 0.409337 | 8_2:+59957678 | None:intergenic |
| TATTTCTAGGTTTGAGAAGA+AGG | 0.414911 | 8_2:-59959052 | Msa1258730:CDS |
| GCAGAACCAGGCACAATAAG+AGG | 0.440871 | 8_2:-59957480 | Msa1258730:CDS |
| AAGTCTCCTCTTATTGTGCC+TGG | 0.451702 | 8_2:+59957474 | None:intergenic |
| TGCAAGGCTTGGGAGGGTGT+TGG | 0.459104 | 8_2:-59957552 | Msa1258730:intron |
| AAGGAAAATGGCGGTATTGG+TGG | 0.464284 | 8_2:+59959353 | None:intergenic |
| AGTTATACCATAGACACAAC+GGG | 0.464995 | 8_2:+59957648 | None:intergenic |
| GCTGATTGACTATATTACTT+CGG | 0.470279 | 8_2:-59957673 | Msa1258730:CDS |
| ATTTCTAGGTTTGAGAAGAA+GGG | 0.472087 | 8_2:-59959051 | Msa1258730:CDS |
| AAAGAGAGGAAGAAGAGAAA+TGG | 0.478517 | 8_2:-59959571 | Msa1258730:exon |
| TAATATAGTCAATCAGCTTA+GGG | 0.480624 | 8_2:+59957679 | None:intergenic |
| AAGACCACGTTGCACTCCAT+CGG | 0.491405 | 8_2:+59959194 | None:intergenic |
| TTCTTCCTCTCTTTGCGTTG+CGG | 0.492440 | 8_2:+59959580 | None:intergenic |
| AGACCACGTTGCACTCCATC+GGG | 0.492601 | 8_2:+59959195 | None:intergenic |
| ACGTAGTTTGGATTTGGATG+TGG | 0.496699 | 8_2:+59959613 | None:intergenic |
| AAGGAAATGCAGAAAGGTGT+TGG | 0.497011 | 8_2:+59959442 | None:intergenic |
| TTATGTTTGCAAGGCTTGGG+AGG | 0.497838 | 8_2:-59957559 | Msa1258730:intron |
| GCTGTTGAAACAGGAAGGTA+AGG | 0.509823 | 8_2:-59957450 | None:intergenic |
| AGGAAATGCAGAAAGGTGTT+GGG | 0.512673 | 8_2:+59959443 | None:intergenic |
| ATGGTTTCAGGAGCATTACA+AGG | 0.519469 | 8_2:-59957724 | Msa1258730:intron |
| AAGAAGAGAAATGGAAGCCA+TGG | 0.525144 | 8_2:-59959562 | Msa1258730:exon |
| CCTATAAGCTTACGTGCTGA+TGG | 0.530791 | 8_2:+59957522 | None:intergenic |
| TATGTTTGCAAGGCTTGGGA+GGG | 0.532452 | 8_2:-59957558 | Msa1258730:intron |
| GTTTGTGTTGCGTAGGAGAG+AGG | 0.534670 | 8_2:+59959503 | None:intergenic |
| TACGAGAGAAGCAATTAAGT+GGG | 0.561109 | 8_2:+59959329 | None:intergenic |
| TTTCTAGGTTTGAGAAGAAG+GGG | 0.568337 | 8_2:-59959050 | Msa1258730:CDS |
| GTGCCTGGTTCTGCTTGCAG+AGG | 0.569047 | 8_2:+59957489 | None:intergenic |
| ATACGAGAGAAGCAATTAAG+TGG | 0.569438 | 8_2:+59959328 | None:intergenic |
| TGTTTGAGTTTGTGTTGCGT+AGG | 0.573003 | 8_2:+59959496 | None:intergenic |
| TACATTATGGTGAAACCCGA+TGG | 0.580171 | 8_2:-59959210 | Msa1258730:CDS |
| AATCCTCTGCAAGCAGAACC+AGG | 0.581765 | 8_2:-59957492 | Msa1258730:CDS |
| GAGAAGCAATTAAGTGGGGA+AGG | 0.599469 | 8_2:+59959334 | None:intergenic |
| CACAGCCGCAACGCAAAGAG+AGG | 0.603901 | 8_2:-59959585 | Msa1258730:five_prime_UTR |
| GCTTCCGCAAAACACGCCCA+TGG | 0.604183 | 8_2:+59959545 | None:intergenic |
| ATGCTCTAAAGAATTAGCTG+AGG | 0.624258 | 8_2:-59958998 | Msa1258730:intron |
| ATTTAGAAGGAAATGCAGAA+AGG | 0.625316 | 8_2:+59959436 | None:intergenic |
| ACTTTGCTGTTGAAACAGGA+AGG | 0.628376 | 8_2:-59957455 | Msa1258730:CDS |
| AGAAGAGAAATGGAAGCCAT+GGG | 0.637883 | 8_2:-59959561 | Msa1258730:exon |
| GAGTTATACCATAGACACAA+CGG | 0.655073 | 8_2:+59957647 | None:intergenic |
| ACGAGAGAAGCAATTAAGTG+GGG | 0.691293 | 8_2:+59959330 | None:intergenic |
| AAACCCGATGGAGTGCAACG+TGG | 0.739266 | 8_2:-59959198 | Msa1258730:CDS |
| AAATGCAGAAAGGTGTTGGG+TGG | 0.739959 | 8_2:+59959446 | None:intergenic |
| GTTATACCATAGACACAACG+GGG | 0.788135 | 8_2:+59957649 | None:intergenic |
| TAAGTGGGGAAGGAAAATGG+CGG | 0.813033 | 8_2:+59959344 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAAAATTGAAGTTTA+AGG | - | chr8_2:59957951-59957970 | Msa1258730:intron | 10.0% |
| !! | TTCAATATATTACATTTATA+TGG | - | chr8_2:59958203-59958222 | Msa1258730:intron | 10.0% |
| !! | AATTTAAAAATTGAAGTTTA+AGG | - | chr8_2:59957951-59957970 | Msa1258730:intron | 10.0% |
| !! | TTCAATATATTACATTTATA+TGG | - | chr8_2:59958203-59958222 | Msa1258730:intron | 10.0% |
| !!! | AATTTATTTTTCTTGTTGTT+GGG | - | chr8_2:59958145-59958164 | Msa1258730:intron | 15.0% |
| !!! | CGATTTTTATTAGTATTAAA+AGG | + | chr8_2:59958269-59958288 | None:intergenic | 15.0% |
| !!! | AATTTATTTTTCTTGTTGTT+GGG | - | chr8_2:59958145-59958164 | Msa1258730:intron | 15.0% |
| !!! | CGATTTTTATTAGTATTAAA+AGG | + | chr8_2:59958269-59958288 | None:intergenic | 15.0% |
| !!! | TAATTGTTGTTTTGTTGAAT+TGG | - | chr8_2:59957977-59957996 | Msa1258730:intron | 20.0% |
| !!! | CAATTTATTTTTCTTGTTGT+TGG | - | chr8_2:59958144-59958163 | Msa1258730:intron | 20.0% |
| !! | TGCATAGATTGAATTTATTT+AGG | + | chr8_2:59958634-59958653 | None:intergenic | 20.0% |
| !!! | TGCTTTTATTCATTTAATGA+GGG | + | chr8_2:59958977-59958996 | None:intergenic | 20.0% |
| !! | TGACTTATTGTGATTATTTA+TGG | - | chr8_2:59959325-59959344 | Msa1258730:intron | 20.0% |
| !!! | TAATTGTTGTTTTGTTGAAT+TGG | - | chr8_2:59957977-59957996 | Msa1258730:intron | 20.0% |
| !!! | CAATTTATTTTTCTTGTTGT+TGG | - | chr8_2:59958144-59958163 | Msa1258730:intron | 20.0% |
| !! | TGCATAGATTGAATTTATTT+AGG | + | chr8_2:59958634-59958653 | None:intergenic | 20.0% |
| !!! | TGCTTTTATTCATTTAATGA+GGG | + | chr8_2:59958977-59958996 | None:intergenic | 20.0% |
| !! | TGACTTATTGTGATTATTTA+TGG | - | chr8_2:59959325-59959344 | Msa1258730:intron | 20.0% |
| ! | AGTAGAAGATGAAAAAAGAT+GGG | + | chr8_2:59957658-59957677 | None:intergenic | 25.0% |
| ! | AAGTAGAAGATGAAAAAAGA+TGG | + | chr8_2:59957659-59957678 | None:intergenic | 25.0% |
| !!! | AAATGTTTTTTTCAATGTGC+AGG | - | chr8_2:59957818-59957837 | Msa1258730:intron | 25.0% |
| ! | TCTCTTAATTTCTTTACTTC+TGG | - | chr8_2:59957902-59957921 | Msa1258730:intron | 25.0% |
| !!! | TTGTTTTGTTGAATTGGTTT+AGG | - | chr8_2:59957983-59958002 | Msa1258730:intron | 25.0% |
| ! | TTAGTATTAAAAGGACCATT+AGG | + | chr8_2:59958260-59958279 | None:intergenic | 25.0% |
| !!! | AAGATCTTTTAAGATACTTC+AGG | - | chr8_2:59958382-59958401 | Msa1258730:intron | 25.0% |
| !! | TTGTTAATCTTTAAGTTCTC+TGG | - | chr8_2:59958462-59958481 | Msa1258730:intron | 25.0% |
| ! | TTCTTGTACTATCAAGTTTA+CGG | + | chr8_2:59958816-59958835 | None:intergenic | 25.0% |
| ! | CCAATTTAATAGATTACTAC+AGG | + | chr8_2:59958912-59958931 | None:intergenic | 25.0% |
| ! | CCTGTAGTAATCTATTAAAT+TGG | - | chr8_2:59958909-59958928 | Msa1258730:intron | 25.0% |
| ! | TTCATTTAATGAGGGTTAAT+AGG | + | chr8_2:59958969-59958988 | None:intergenic | 25.0% |
| !! | GTGCTTTTATTCATTTAATG+AGG | + | chr8_2:59958978-59958997 | None:intergenic | 25.0% |
| !! | ATACAATTGGATTTTGTAAC+TGG | + | chr8_2:59959175-59959194 | None:intergenic | 25.0% |
| ! | CATGAAAATATGGATACAAT+TGG | + | chr8_2:59959188-59959207 | None:intergenic | 25.0% |
| !! | CAATTGTATCCATATTTTCA+TGG | - | chr8_2:59959186-59959205 | Msa1258730:intron | 25.0% |
| ! | AGTAAGAAACCATGAAAATA+TGG | + | chr8_2:59959198-59959217 | None:intergenic | 25.0% |
| ! | TAAGTCTACTCTATATCATA+TGG | + | chr8_2:59959224-59959243 | None:intergenic | 25.0% |
| !!! | GTTAATTTGCTATTTACACA+TGG | - | chr8_2:59959301-59959320 | Msa1258730:intron | 25.0% |
| ! | TTGTGATTATTTATGGTTTC+AGG | - | chr8_2:59959332-59959351 | Msa1258730:CDS | 25.0% |
| ! | TAATATAGTCAATCAGCTTA+GGG | + | chr8_2:59959392-59959411 | None:intergenic | 25.0% |
| ! | AGTAGAAGATGAAAAAAGAT+GGG | + | chr8_2:59957658-59957677 | None:intergenic | 25.0% |
| ! | AAGTAGAAGATGAAAAAAGA+TGG | + | chr8_2:59957659-59957678 | None:intergenic | 25.0% |
| !!! | AAATGTTTTTTTCAATGTGC+AGG | - | chr8_2:59957818-59957837 | Msa1258730:intron | 25.0% |
| ! | TCTCTTAATTTCTTTACTTC+TGG | - | chr8_2:59957902-59957921 | Msa1258730:intron | 25.0% |
| !!! | TTGTTTTGTTGAATTGGTTT+AGG | - | chr8_2:59957983-59958002 | Msa1258730:intron | 25.0% |
| ! | TTAGTATTAAAAGGACCATT+AGG | + | chr8_2:59958260-59958279 | None:intergenic | 25.0% |
| !!! | AAGATCTTTTAAGATACTTC+AGG | - | chr8_2:59958382-59958401 | Msa1258730:intron | 25.0% |
| !! | TTGTTAATCTTTAAGTTCTC+TGG | - | chr8_2:59958462-59958481 | Msa1258730:intron | 25.0% |
| ! | TTCTTGTACTATCAAGTTTA+CGG | + | chr8_2:59958816-59958835 | None:intergenic | 25.0% |
| ! | CCAATTTAATAGATTACTAC+AGG | + | chr8_2:59958912-59958931 | None:intergenic | 25.0% |
| ! | CCTGTAGTAATCTATTAAAT+TGG | - | chr8_2:59958909-59958928 | Msa1258730:intron | 25.0% |
| ! | TTCATTTAATGAGGGTTAAT+AGG | + | chr8_2:59958969-59958988 | None:intergenic | 25.0% |
| !! | GTGCTTTTATTCATTTAATG+AGG | + | chr8_2:59958978-59958997 | None:intergenic | 25.0% |
| !! | ATACAATTGGATTTTGTAAC+TGG | + | chr8_2:59959175-59959194 | None:intergenic | 25.0% |
| ! | CATGAAAATATGGATACAAT+TGG | + | chr8_2:59959188-59959207 | None:intergenic | 25.0% |
| !! | CAATTGTATCCATATTTTCA+TGG | - | chr8_2:59959186-59959205 | Msa1258730:intron | 25.0% |
| ! | AGTAAGAAACCATGAAAATA+TGG | + | chr8_2:59959198-59959217 | None:intergenic | 25.0% |
| ! | TAAGTCTACTCTATATCATA+TGG | + | chr8_2:59959224-59959243 | None:intergenic | 25.0% |
| !!! | GTTAATTTGCTATTTACACA+TGG | - | chr8_2:59959301-59959320 | Msa1258730:intron | 25.0% |
| ! | TTGTGATTATTTATGGTTTC+AGG | - | chr8_2:59959332-59959351 | Msa1258730:CDS | 25.0% |
| ! | TAATATAGTCAATCAGCTTA+GGG | + | chr8_2:59959392-59959411 | None:intergenic | 25.0% |
| ATTTAGAAGGAAATGCAGAA+AGG | + | chr8_2:59957635-59957654 | None:intergenic | 30.0% | |
| GAAAAAAGATGGGATTTAGA+AGG | + | chr8_2:59957648-59957667 | None:intergenic | 30.0% | |
| AGTTGACCAAACTTACATTA+TGG | - | chr8_2:59957845-59957864 | Msa1258730:intron | 30.0% | |
| GTTTCACCATAATGTAAGTT+TGG | + | chr8_2:59957854-59957873 | None:intergenic | 30.0% | |
| !! | TTTTGTTGAATTGGTTTAGG+TGG | - | chr8_2:59957986-59958005 | Msa1258730:intron | 30.0% |
| ! | TTTGTTGAATTGGTTTAGGT+GGG | - | chr8_2:59957987-59958006 | Msa1258730:intron | 30.0% |
| !! | TATTTCTAGGTTTGAGAAGA+AGG | - | chr8_2:59958016-59958035 | Msa1258730:intron | 30.0% |
| ! | ATTTCTAGGTTTGAGAAGAA+GGG | - | chr8_2:59958017-59958036 | Msa1258730:intron | 30.0% |
| ! | AAGAAGGGGTTTAAGTTAAT+TGG | - | chr8_2:59958032-59958051 | Msa1258730:intron | 30.0% |
| !!! | TTTTTCTTGTTGTTGGGATA+TGG | - | chr8_2:59958151-59958170 | Msa1258730:intron | 30.0% |
| !!! | TTTTCTTGTTGTTGGGATAT+GGG | - | chr8_2:59958152-59958171 | Msa1258730:intron | 30.0% |
| ATTTGTAAAGGAGAATGACA+GGG | - | chr8_2:59958180-59958199 | Msa1258730:intron | 30.0% | |
| ! | ATACAGAGTACTTAACCTAA+TGG | - | chr8_2:59958242-59958261 | Msa1258730:intron | 30.0% |
| !!! | TTTTAAGATACTTCAGGATC+AGG | - | chr8_2:59958388-59958407 | Msa1258730:intron | 30.0% |
| ATAACAAGCTATACCTTAGA+GGG | + | chr8_2:59958443-59958462 | None:intergenic | 30.0% | |
| AATAACAAGCTATACCTTAG+AGG | + | chr8_2:59958444-59958463 | None:intergenic | 30.0% | |
| TCAATTGAAGAGGAACTAAA+TGG | - | chr8_2:59958572-59958591 | Msa1258730:intron | 30.0% | |
| CAATTGAAGAGGAACTAAAT+GGG | - | chr8_2:59958573-59958592 | Msa1258730:intron | 30.0% | |
| CTAAGATAGGTATAGGTATA+CGG | - | chr8_2:59958683-59958702 | Msa1258730:intron | 30.0% | |
| TAAGATAGGTATAGGTATAC+GGG | - | chr8_2:59958684-59958703 | Msa1258730:intron | 30.0% | |
| !!! | CTAATTATGGGTTTTAGGTA+GGG | - | chr8_2:59958862-59958881 | Msa1258730:intron | 30.0% |
| ATGAACTTCACAATATGTCA+TGG | + | chr8_2:59959028-59959047 | None:intergenic | 30.0% | |
| CATATTGTGAAGTTCATTCA+AGG | - | chr8_2:59959031-59959050 | Msa1258730:CDS | 30.0% | |
| TCTGAATATGTTTCCATGAA+AGG | - | chr8_2:59959088-59959107 | Msa1258730:intron | 30.0% | |
| AATATGTTTCCATGAAAGGA+TGG | - | chr8_2:59959092-59959111 | Msa1258730:intron | 30.0% | |
| ! | AATTGGATTTTGTAACTGGA+TGG | + | chr8_2:59959171-59959190 | None:intergenic | 30.0% |
| GTAATATAGTCAATCAGCTT+AGG | + | chr8_2:59959393-59959412 | None:intergenic | 30.0% | |
| GCTGATTGACTATATTACTT+CGG | - | chr8_2:59959395-59959414 | Msa1258730:CDS | 30.0% | |
| CTGATTGACTATATTACTTC+GGG | - | chr8_2:59959396-59959415 | Msa1258730:CDS | 30.0% | |
| !!! | TTTCTGGTTTTATGTTTGCA+AGG | - | chr8_2:59959500-59959519 | Msa1258730:CDS | 30.0% |
| ATTTAGAAGGAAATGCAGAA+AGG | + | chr8_2:59957635-59957654 | None:intergenic | 30.0% | |
| GAAAAAAGATGGGATTTAGA+AGG | + | chr8_2:59957648-59957667 | None:intergenic | 30.0% | |
| AGTTGACCAAACTTACATTA+TGG | - | chr8_2:59957845-59957864 | Msa1258730:intron | 30.0% | |
| GTTTCACCATAATGTAAGTT+TGG | + | chr8_2:59957854-59957873 | None:intergenic | 30.0% | |
| !! | TTTTGTTGAATTGGTTTAGG+TGG | - | chr8_2:59957986-59958005 | Msa1258730:intron | 30.0% |
| ! | TTTGTTGAATTGGTTTAGGT+GGG | - | chr8_2:59957987-59958006 | Msa1258730:intron | 30.0% |
| !! | TATTTCTAGGTTTGAGAAGA+AGG | - | chr8_2:59958016-59958035 | Msa1258730:intron | 30.0% |
| ! | ATTTCTAGGTTTGAGAAGAA+GGG | - | chr8_2:59958017-59958036 | Msa1258730:intron | 30.0% |
| ! | AAGAAGGGGTTTAAGTTAAT+TGG | - | chr8_2:59958032-59958051 | Msa1258730:intron | 30.0% |
| !!! | TTTTTCTTGTTGTTGGGATA+TGG | - | chr8_2:59958151-59958170 | Msa1258730:intron | 30.0% |
| !!! | TTTTCTTGTTGTTGGGATAT+GGG | - | chr8_2:59958152-59958171 | Msa1258730:intron | 30.0% |
| ATTTGTAAAGGAGAATGACA+GGG | - | chr8_2:59958180-59958199 | Msa1258730:intron | 30.0% | |
| ! | ATACAGAGTACTTAACCTAA+TGG | - | chr8_2:59958242-59958261 | Msa1258730:intron | 30.0% |
| !!! | TTTTAAGATACTTCAGGATC+AGG | - | chr8_2:59958388-59958407 | Msa1258730:intron | 30.0% |
| ATAACAAGCTATACCTTAGA+GGG | + | chr8_2:59958443-59958462 | None:intergenic | 30.0% | |
| AATAACAAGCTATACCTTAG+AGG | + | chr8_2:59958444-59958463 | None:intergenic | 30.0% | |
| TCAATTGAAGAGGAACTAAA+TGG | - | chr8_2:59958572-59958591 | Msa1258730:intron | 30.0% | |
| CAATTGAAGAGGAACTAAAT+GGG | - | chr8_2:59958573-59958592 | Msa1258730:intron | 30.0% | |
| CTAAGATAGGTATAGGTATA+CGG | - | chr8_2:59958683-59958702 | Msa1258730:intron | 30.0% | |
| TAAGATAGGTATAGGTATAC+GGG | - | chr8_2:59958684-59958703 | Msa1258730:intron | 30.0% | |
| !!! | CTAATTATGGGTTTTAGGTA+GGG | - | chr8_2:59958862-59958881 | Msa1258730:intron | 30.0% |
| ATGAACTTCACAATATGTCA+TGG | + | chr8_2:59959028-59959047 | None:intergenic | 30.0% | |
| CATATTGTGAAGTTCATTCA+AGG | - | chr8_2:59959031-59959050 | Msa1258730:CDS | 30.0% | |
| TCTGAATATGTTTCCATGAA+AGG | - | chr8_2:59959088-59959107 | Msa1258730:intron | 30.0% | |
| AATATGTTTCCATGAAAGGA+TGG | - | chr8_2:59959092-59959111 | Msa1258730:intron | 30.0% | |
| ! | AATTGGATTTTGTAACTGGA+TGG | + | chr8_2:59959171-59959190 | None:intergenic | 30.0% |
| GTAATATAGTCAATCAGCTT+AGG | + | chr8_2:59959393-59959412 | None:intergenic | 30.0% | |
| GCTGATTGACTATATTACTT+CGG | - | chr8_2:59959395-59959414 | Msa1258730:CDS | 30.0% | |
| CTGATTGACTATATTACTTC+GGG | - | chr8_2:59959396-59959415 | Msa1258730:CDS | 30.0% | |
| !!! | TTTCTGGTTTTATGTTTGCA+AGG | - | chr8_2:59959500-59959519 | Msa1258730:CDS | 30.0% |
| AAAGAGAGGAAGAAGAGAAA+TGG | - | chr8_2:59957497-59957516 | Msa1258730:CDS | 35.0% | |
| AATTAAGTGGGGAAGGAAAA+TGG | + | chr8_2:59957730-59957749 | None:intergenic | 35.0% | |
| TACGAGAGAAGCAATTAAGT+GGG | + | chr8_2:59957742-59957761 | None:intergenic | 35.0% | |
| ATACGAGAGAAGCAATTAAG+TGG | + | chr8_2:59957743-59957762 | None:intergenic | 35.0% | |
| ! | AGGTGGGTGAAATTATTTCT+AGG | - | chr8_2:59958003-59958022 | Msa1258730:intron | 35.0% |
| TTTCTAGGTTTGAGAAGAAG+GGG | - | chr8_2:59958018-59958037 | Msa1258730:intron | 35.0% | |
| !! | ATGCTCTAAAGAATTAGCTG+AGG | - | chr8_2:59958070-59958089 | Msa1258730:intron | 35.0% |
| !! | TTTCTTGTTGTTGGGATATG+GGG | - | chr8_2:59958153-59958172 | Msa1258730:intron | 35.0% |
| ! | ATATGGGGTTCGATTTGTAA+AGG | - | chr8_2:59958168-59958187 | Msa1258730:intron | 35.0% |
| GATTTGTAAAGGAGAATGAC+AGG | - | chr8_2:59958179-59958198 | Msa1258730:intron | 35.0% | |
| GAGTGTTAACAATACCACTA+TGG | + | chr8_2:59958419-59958438 | None:intergenic | 35.0% | |
| TCAATTGAACACCCTTACAA+TGG | + | chr8_2:59958560-59958579 | None:intergenic | 35.0% | |
| ! | GTCTTGTCTTTTATGCAGAT+TGG | + | chr8_2:59958612-59958631 | None:intergenic | 35.0% |
| CAATCTATGCAACAACAAGA+TGG | - | chr8_2:59958643-59958662 | Msa1258730:intron | 35.0% | |
| AGAGATCAAACATGAATGTC+AGG | - | chr8_2:59958782-59958801 | Msa1258730:intron | 35.0% | |
| GAGATCAAACATGAATGTCA+GGG | - | chr8_2:59958783-59958802 | Msa1258730:intron | 35.0% | |
| ACAAGAAAGTCTCTTCAAGA+TGG | - | chr8_2:59958829-59958848 | Msa1258730:intron | 35.0% | |
| TAAAACCCATAATTAGGCCA+TGG | + | chr8_2:59958858-59958877 | None:intergenic | 35.0% | |
| ! | ATGGCCTAATTATGGGTTTT+AGG | - | chr8_2:59958857-59958876 | Msa1258730:intron | 35.0% |
| CCTACCTAAAACCCATAATT+AGG | + | chr8_2:59958864-59958883 | None:intergenic | 35.0% | |
| !!! | CCTAATTATGGGTTTTAGGT+AGG | - | chr8_2:59958861-59958880 | Msa1258730:intron | 35.0% |
| AACTATACTCCATCCTTTCA+TGG | + | chr8_2:59959104-59959123 | None:intergenic | 35.0% | |
| GGAAGAAAGACTTCTGATTT+AGG | + | chr8_2:59959371-59959390 | None:intergenic | 35.0% | |
| AGTTATACCATAGACACAAC+GGG | + | chr8_2:59959423-59959442 | None:intergenic | 35.0% | |
| GAGTTATACCATAGACACAA+CGG | + | chr8_2:59959424-59959443 | None:intergenic | 35.0% | |
| TAGTATCCCATTCTCAATGA+GGG | - | chr8_2:59959451-59959470 | Msa1258730:CDS | 35.0% | |
| TACCTGTTGAATGTACTTTC+TGG | - | chr8_2:59959484-59959503 | Msa1258730:CDS | 35.0% | |
| ! | AACCAGAAAGTACATTCAAC+AGG | + | chr8_2:59959489-59959508 | None:intergenic | 35.0% |
| ! | GTTTTATGTTTGCAAGGCTT+GGG | - | chr8_2:59959506-59959525 | Msa1258730:CDS | 35.0% |
| AAAGAGAGGAAGAAGAGAAA+TGG | - | chr8_2:59957497-59957516 | Msa1258730:CDS | 35.0% | |
| AATTAAGTGGGGAAGGAAAA+TGG | + | chr8_2:59957730-59957749 | None:intergenic | 35.0% | |
| TACGAGAGAAGCAATTAAGT+GGG | + | chr8_2:59957742-59957761 | None:intergenic | 35.0% | |
| ATACGAGAGAAGCAATTAAG+TGG | + | chr8_2:59957743-59957762 | None:intergenic | 35.0% | |
| ! | AGGTGGGTGAAATTATTTCT+AGG | - | chr8_2:59958003-59958022 | Msa1258730:intron | 35.0% |
| TTTCTAGGTTTGAGAAGAAG+GGG | - | chr8_2:59958018-59958037 | Msa1258730:intron | 35.0% | |
| !! | ATGCTCTAAAGAATTAGCTG+AGG | - | chr8_2:59958070-59958089 | Msa1258730:intron | 35.0% |
| !! | TTTCTTGTTGTTGGGATATG+GGG | - | chr8_2:59958153-59958172 | Msa1258730:intron | 35.0% |
| ! | ATATGGGGTTCGATTTGTAA+AGG | - | chr8_2:59958168-59958187 | Msa1258730:intron | 35.0% |
| GATTTGTAAAGGAGAATGAC+AGG | - | chr8_2:59958179-59958198 | Msa1258730:intron | 35.0% | |
| GAGTGTTAACAATACCACTA+TGG | + | chr8_2:59958419-59958438 | None:intergenic | 35.0% | |
| TCAATTGAACACCCTTACAA+TGG | + | chr8_2:59958560-59958579 | None:intergenic | 35.0% | |
| ! | GTCTTGTCTTTTATGCAGAT+TGG | + | chr8_2:59958612-59958631 | None:intergenic | 35.0% |
| CAATCTATGCAACAACAAGA+TGG | - | chr8_2:59958643-59958662 | Msa1258730:intron | 35.0% | |
| AGAGATCAAACATGAATGTC+AGG | - | chr8_2:59958782-59958801 | Msa1258730:intron | 35.0% | |
| GAGATCAAACATGAATGTCA+GGG | - | chr8_2:59958783-59958802 | Msa1258730:intron | 35.0% | |
| ACAAGAAAGTCTCTTCAAGA+TGG | - | chr8_2:59958829-59958848 | Msa1258730:intron | 35.0% | |
| TAAAACCCATAATTAGGCCA+TGG | + | chr8_2:59958858-59958877 | None:intergenic | 35.0% | |
| ! | ATGGCCTAATTATGGGTTTT+AGG | - | chr8_2:59958857-59958876 | Msa1258730:intron | 35.0% |
| CCTACCTAAAACCCATAATT+AGG | + | chr8_2:59958864-59958883 | None:intergenic | 35.0% | |
| !!! | CCTAATTATGGGTTTTAGGT+AGG | - | chr8_2:59958861-59958880 | Msa1258730:intron | 35.0% |
| AACTATACTCCATCCTTTCA+TGG | + | chr8_2:59959104-59959123 | None:intergenic | 35.0% | |
| GGAAGAAAGACTTCTGATTT+AGG | + | chr8_2:59959371-59959390 | None:intergenic | 35.0% | |
| AGTTATACCATAGACACAAC+GGG | + | chr8_2:59959423-59959442 | None:intergenic | 35.0% | |
| GAGTTATACCATAGACACAA+CGG | + | chr8_2:59959424-59959443 | None:intergenic | 35.0% | |
| TAGTATCCCATTCTCAATGA+GGG | - | chr8_2:59959451-59959470 | Msa1258730:CDS | 35.0% | |
| TACCTGTTGAATGTACTTTC+TGG | - | chr8_2:59959484-59959503 | Msa1258730:CDS | 35.0% | |
| ! | AACCAGAAAGTACATTCAAC+AGG | + | chr8_2:59959489-59959508 | None:intergenic | 35.0% |
| ! | GTTTTATGTTTGCAAGGCTT+GGG | - | chr8_2:59959506-59959525 | Msa1258730:CDS | 35.0% |
| ACGTAGTTTGGATTTGGATG+TGG | + | chr8_2:59957458-59957477 | None:intergenic | 40.0% | |
| GGAACAACGTAGTTTGGATT+TGG | + | chr8_2:59957464-59957483 | None:intergenic | 40.0% | |
| AAGAAGAGAAATGGAAGCCA+TGG | - | chr8_2:59957506-59957525 | Msa1258730:CDS | 40.0% | |
| AGAAGAGAAATGGAAGCCAT+GGG | - | chr8_2:59957507-59957526 | Msa1258730:CDS | 40.0% | |
| ! | TGTTTGAGTTTGTGTTGCGT+AGG | + | chr8_2:59957575-59957594 | None:intergenic | 40.0% |
| !! | AGGAAATGCAGAAAGGTGTT+GGG | + | chr8_2:59957628-59957647 | None:intergenic | 40.0% |
| ! | AAGGAAATGCAGAAAGGTGT+TGG | + | chr8_2:59957629-59957648 | None:intergenic | 40.0% |
| ! | TATTGGTGGAGCTTTTAGTG+CGG | + | chr8_2:59957704-59957723 | None:intergenic | 40.0% |
| ACGAGAGAAGCAATTAAGTG+GGG | + | chr8_2:59957741-59957760 | None:intergenic | 40.0% | |
| TACATTATGGTGAAACCCGA+TGG | - | chr8_2:59957858-59957877 | Msa1258730:intron | 40.0% | |
| AGGATCAGGATATACCATAG+TGG | - | chr8_2:59958402-59958421 | Msa1258730:intron | 40.0% | |
| TTGTTAACACTCTCCCTCTA+AGG | - | chr8_2:59958427-59958446 | Msa1258730:intron | 40.0% | |
| !! | GTAAGGGTGTTCAATTGAAG+AGG | - | chr8_2:59958562-59958581 | Msa1258730:intron | 40.0% |
| !! | ACACGCTCTAAGATAGGTAT+AGG | - | chr8_2:59958676-59958695 | Msa1258730:intron | 40.0% |
| TCTCTTCAAGATGGATACCA+TGG | - | chr8_2:59958838-59958857 | Msa1258730:intron | 40.0% | |
| TGGATACCATGGCCTAATTA+TGG | - | chr8_2:59958849-59958868 | Msa1258730:intron | 40.0% | |
| GGATACCATGGCCTAATTAT+GGG | - | chr8_2:59958850-59958869 | Msa1258730:intron | 40.0% | |
| GTAACTGGATGGTTGGAATT+AGG | + | chr8_2:59959160-59959179 | None:intergenic | 40.0% | |
| ! | GGATTTTGTAACTGGATGGT+TGG | + | chr8_2:59959167-59959186 | None:intergenic | 40.0% |
| !! | ATGGTTTCAGGAGCATTACA+AGG | - | chr8_2:59959344-59959363 | Msa1258730:CDS | 40.0% |
| GTTATACCATAGACACAACG+GGG | + | chr8_2:59959422-59959441 | None:intergenic | 40.0% | |
| CATTGAGAATGGGATACTAG+TGG | + | chr8_2:59959450-59959469 | None:intergenic | 40.0% | |
| CTAGTATCCCATTCTCAATG+AGG | - | chr8_2:59959450-59959469 | Msa1258730:CDS | 40.0% | |
| GTGAAACCCTCATTGAGAAT+GGG | + | chr8_2:59959460-59959479 | None:intergenic | 40.0% | |
| TGTGAAACCCTCATTGAGAA+TGG | + | chr8_2:59959461-59959480 | None:intergenic | 40.0% | |
| !! | GGTTTTATGTTTGCAAGGCT+TGG | - | chr8_2:59959505-59959524 | Msa1258730:CDS | 40.0% |
| !! | ACTTTGCTGTTGAAACAGGA+AGG | - | chr8_2:59959613-59959632 | Msa1258730:five_prime_UTR | 40.0% |
| ACGTAGTTTGGATTTGGATG+TGG | + | chr8_2:59957458-59957477 | None:intergenic | 40.0% | |
| GGAACAACGTAGTTTGGATT+TGG | + | chr8_2:59957464-59957483 | None:intergenic | 40.0% | |
| AAGAAGAGAAATGGAAGCCA+TGG | - | chr8_2:59957506-59957525 | Msa1258730:CDS | 40.0% | |
| AGAAGAGAAATGGAAGCCAT+GGG | - | chr8_2:59957507-59957526 | Msa1258730:CDS | 40.0% | |
| ! | TGTTTGAGTTTGTGTTGCGT+AGG | + | chr8_2:59957575-59957594 | None:intergenic | 40.0% |
| !! | AGGAAATGCAGAAAGGTGTT+GGG | + | chr8_2:59957628-59957647 | None:intergenic | 40.0% |
| ! | AAGGAAATGCAGAAAGGTGT+TGG | + | chr8_2:59957629-59957648 | None:intergenic | 40.0% |
| ! | TATTGGTGGAGCTTTTAGTG+CGG | + | chr8_2:59957704-59957723 | None:intergenic | 40.0% |
| ACGAGAGAAGCAATTAAGTG+GGG | + | chr8_2:59957741-59957760 | None:intergenic | 40.0% | |
| TACATTATGGTGAAACCCGA+TGG | - | chr8_2:59957858-59957877 | Msa1258730:intron | 40.0% | |
| AGGATCAGGATATACCATAG+TGG | - | chr8_2:59958402-59958421 | Msa1258730:intron | 40.0% | |
| TTGTTAACACTCTCCCTCTA+AGG | - | chr8_2:59958427-59958446 | Msa1258730:intron | 40.0% | |
| !! | GTAAGGGTGTTCAATTGAAG+AGG | - | chr8_2:59958562-59958581 | Msa1258730:intron | 40.0% |
| !! | ACACGCTCTAAGATAGGTAT+AGG | - | chr8_2:59958676-59958695 | Msa1258730:intron | 40.0% |
| TCTCTTCAAGATGGATACCA+TGG | - | chr8_2:59958838-59958857 | Msa1258730:intron | 40.0% | |
| TGGATACCATGGCCTAATTA+TGG | - | chr8_2:59958849-59958868 | Msa1258730:intron | 40.0% | |
| GGATACCATGGCCTAATTAT+GGG | - | chr8_2:59958850-59958869 | Msa1258730:intron | 40.0% | |
| GTAACTGGATGGTTGGAATT+AGG | + | chr8_2:59959160-59959179 | None:intergenic | 40.0% | |
| ! | GGATTTTGTAACTGGATGGT+TGG | + | chr8_2:59959167-59959186 | None:intergenic | 40.0% |
| !! | ATGGTTTCAGGAGCATTACA+AGG | - | chr8_2:59959344-59959363 | Msa1258730:CDS | 40.0% |
| GTTATACCATAGACACAACG+GGG | + | chr8_2:59959422-59959441 | None:intergenic | 40.0% | |
| CATTGAGAATGGGATACTAG+TGG | + | chr8_2:59959450-59959469 | None:intergenic | 40.0% | |
| CTAGTATCCCATTCTCAATG+AGG | - | chr8_2:59959450-59959469 | Msa1258730:CDS | 40.0% | |
| GTGAAACCCTCATTGAGAAT+GGG | + | chr8_2:59959460-59959479 | None:intergenic | 40.0% | |
| TGTGAAACCCTCATTGAGAA+TGG | + | chr8_2:59959461-59959480 | None:intergenic | 40.0% | |
| !! | GGTTTTATGTTTGCAAGGCT+TGG | - | chr8_2:59959505-59959524 | Msa1258730:CDS | 40.0% |
| !! | ACTTTGCTGTTGAAACAGGA+AGG | - | chr8_2:59959613-59959632 | Msa1258730:five_prime_UTR | 40.0% |
| TTCTTCCTCTCTTTGCGTTG+CGG | + | chr8_2:59957491-59957510 | None:intergenic | 45.0% | |
| !! | AAATGCAGAAAGGTGTTGGG+TGG | + | chr8_2:59957625-59957644 | None:intergenic | 45.0% |
| ! | GCTTTTAGTGCGGATGGTTT+TGG | + | chr8_2:59957694-59957713 | None:intergenic | 45.0% |
| ! | AAGGAAAATGGCGGTATTGG+TGG | + | chr8_2:59957718-59957737 | None:intergenic | 45.0% |
| TAAGTGGGGAAGGAAAATGG+CGG | + | chr8_2:59957727-59957746 | None:intergenic | 45.0% | |
| GAGAAGCAATTAAGTGGGGA+AGG | + | chr8_2:59957737-59957756 | None:intergenic | 45.0% | |
| TCTGGAGAGACACTGTTGTA+AGG | - | chr8_2:59958480-59958499 | Msa1258730:intron | 45.0% | |
| CTGGAGAGACACTGTTGTAA+GGG | - | chr8_2:59958481-59958500 | Msa1258730:intron | 45.0% | |
| ! | ACTGTTGTAAGGGTGTGCAA+TGG | - | chr8_2:59958491-59958510 | Msa1258730:intron | 45.0% |
| !! | GAGCAAACACGCTCTAAGAT+AGG | - | chr8_2:59958670-59958689 | Msa1258730:intron | 45.0% |
| GAGTCGATCTATGGTGAGAA+GGG | - | chr8_2:59958706-59958725 | Msa1258730:intron | 45.0% | |
| AGTCGATCTATGGTGAGAAG+GGG | - | chr8_2:59958707-59958726 | Msa1258730:intron | 45.0% | |
| ATCTATGGTGAGAAGGGGAT+TGG | - | chr8_2:59958712-59958731 | Msa1258730:intron | 45.0% | |
| ! | GATCTCTTTTTGCTCTGCTC+TGG | + | chr8_2:59958769-59958788 | None:intergenic | 45.0% |
| CAAACATGAATGTCAGGGTC+TGG | - | chr8_2:59958788-59958807 | Msa1258730:intron | 45.0% | |
| GGAACGACAAAAAGAGAGAC+AGG | - | chr8_2:59958883-59958902 | Msa1258730:intron | 45.0% | |
| TTATGTTTGCAAGGCTTGGG+AGG | - | chr8_2:59959509-59959528 | Msa1258730:CDS | 45.0% | |
| TATGTTTGCAAGGCTTGGGA+GGG | - | chr8_2:59959510-59959529 | Msa1258730:CDS | 45.0% | |
| CCTATAAGCTTACGTGCTGA+TGG | + | chr8_2:59959549-59959568 | None:intergenic | 45.0% | |
| CCATCAGCACGTAAGCTTAT+AGG | - | chr8_2:59959546-59959565 | Msa1258730:CDS | 45.0% | |
| AAGTCTCCTCTTATTGTGCC+TGG | + | chr8_2:59959597-59959616 | None:intergenic | 45.0% | |
| !! | GGAGACTTTGCTGTTGAAAC+AGG | - | chr8_2:59959609-59959628 | Msa1258730:five_prime_UTR | 45.0% |
| TTCTTCCTCTCTTTGCGTTG+CGG | + | chr8_2:59957491-59957510 | None:intergenic | 45.0% | |
| !! | AAATGCAGAAAGGTGTTGGG+TGG | + | chr8_2:59957625-59957644 | None:intergenic | 45.0% |
| ! | GCTTTTAGTGCGGATGGTTT+TGG | + | chr8_2:59957694-59957713 | None:intergenic | 45.0% |
| ! | AAGGAAAATGGCGGTATTGG+TGG | + | chr8_2:59957718-59957737 | None:intergenic | 45.0% |
| TAAGTGGGGAAGGAAAATGG+CGG | + | chr8_2:59957727-59957746 | None:intergenic | 45.0% | |
| GAGAAGCAATTAAGTGGGGA+AGG | + | chr8_2:59957737-59957756 | None:intergenic | 45.0% | |
| TCTGGAGAGACACTGTTGTA+AGG | - | chr8_2:59958480-59958499 | Msa1258730:intron | 45.0% | |
| CTGGAGAGACACTGTTGTAA+GGG | - | chr8_2:59958481-59958500 | Msa1258730:intron | 45.0% | |
| ! | ACTGTTGTAAGGGTGTGCAA+TGG | - | chr8_2:59958491-59958510 | Msa1258730:intron | 45.0% |
| !! | GAGCAAACACGCTCTAAGAT+AGG | - | chr8_2:59958670-59958689 | Msa1258730:intron | 45.0% |
| GAGTCGATCTATGGTGAGAA+GGG | - | chr8_2:59958706-59958725 | Msa1258730:intron | 45.0% | |
| AGTCGATCTATGGTGAGAAG+GGG | - | chr8_2:59958707-59958726 | Msa1258730:intron | 45.0% | |
| ATCTATGGTGAGAAGGGGAT+TGG | - | chr8_2:59958712-59958731 | Msa1258730:intron | 45.0% | |
| ! | GATCTCTTTTTGCTCTGCTC+TGG | + | chr8_2:59958769-59958788 | None:intergenic | 45.0% |
| CAAACATGAATGTCAGGGTC+TGG | - | chr8_2:59958788-59958807 | Msa1258730:intron | 45.0% | |
| GGAACGACAAAAAGAGAGAC+AGG | - | chr8_2:59958883-59958902 | Msa1258730:intron | 45.0% | |
| TTATGTTTGCAAGGCTTGGG+AGG | - | chr8_2:59959509-59959528 | Msa1258730:CDS | 45.0% | |
| TATGTTTGCAAGGCTTGGGA+GGG | - | chr8_2:59959510-59959529 | Msa1258730:CDS | 45.0% | |
| CCTATAAGCTTACGTGCTGA+TGG | + | chr8_2:59959549-59959568 | None:intergenic | 45.0% | |
| CCATCAGCACGTAAGCTTAT+AGG | - | chr8_2:59959546-59959565 | Msa1258730:CDS | 45.0% | |
| AAGTCTCCTCTTATTGTGCC+TGG | + | chr8_2:59959597-59959616 | None:intergenic | 45.0% | |
| !! | GGAGACTTTGCTGTTGAAAC+AGG | - | chr8_2:59959609-59959628 | Msa1258730:five_prime_UTR | 45.0% |
| GGCTGTGGAACAACGTAGTT+TGG | + | chr8_2:59957470-59957489 | None:intergenic | 50.0% | |
| GTTTGTGTTGCGTAGGAGAG+AGG | + | chr8_2:59957568-59957587 | None:intergenic | 50.0% | |
| !!! | AGTGCGGATGGTTTTGGCAT+AGG | + | chr8_2:59957688-59957707 | None:intergenic | 50.0% |
| GGGAAGGAAAATGGCGGTAT+TGG | + | chr8_2:59957721-59957740 | None:intergenic | 50.0% | |
| AAGACCACGTTGCACTCCAT+CGG | + | chr8_2:59957877-59957896 | None:intergenic | 50.0% | |
| ! | GTTGTAAGGGTGTGCAATGG+CGG | - | chr8_2:59958494-59958513 | Msa1258730:intron | 50.0% |
| GAGGCGTGATGCAGTTGTAA+GGG | - | chr8_2:59958516-59958535 | Msa1258730:intron | 50.0% | |
| TTACAATGGCACCTCAGCTG+TGG | + | chr8_2:59958546-59958565 | None:intergenic | 50.0% | |
| !! | ACAGCTGAGGTGCCATTGTA+AGG | - | chr8_2:59958545-59958564 | Msa1258730:intron | 50.0% |
| !! | CAGCTGAGGTGCCATTGTAA+GGG | - | chr8_2:59958546-59958565 | Msa1258730:intron | 50.0% |
| GGTATACGGGAGTCGATCTA+TGG | - | chr8_2:59958697-59958716 | Msa1258730:intron | 50.0% | |
| GGAGTCGATCTATGGTGAGA+AGG | - | chr8_2:59958705-59958724 | Msa1258730:intron | 50.0% | |
| AATCCTCTGCAAGCAGAACC+AGG | - | chr8_2:59959576-59959595 | Msa1258730:five_prime_UTR | 50.0% | |
| GCAGAACCAGGCACAATAAG+AGG | - | chr8_2:59959588-59959607 | Msa1258730:five_prime_UTR | 50.0% | |
| GGCTGTGGAACAACGTAGTT+TGG | + | chr8_2:59957470-59957489 | None:intergenic | 50.0% | |
| GTTTGTGTTGCGTAGGAGAG+AGG | + | chr8_2:59957568-59957587 | None:intergenic | 50.0% | |
| !!! | AGTGCGGATGGTTTTGGCAT+AGG | + | chr8_2:59957688-59957707 | None:intergenic | 50.0% |
| GGGAAGGAAAATGGCGGTAT+TGG | + | chr8_2:59957721-59957740 | None:intergenic | 50.0% | |
| AAGACCACGTTGCACTCCAT+CGG | + | chr8_2:59957877-59957896 | None:intergenic | 50.0% | |
| ! | GTTGTAAGGGTGTGCAATGG+CGG | - | chr8_2:59958494-59958513 | Msa1258730:intron | 50.0% |
| GAGGCGTGATGCAGTTGTAA+GGG | - | chr8_2:59958516-59958535 | Msa1258730:intron | 50.0% | |
| TTACAATGGCACCTCAGCTG+TGG | + | chr8_2:59958546-59958565 | None:intergenic | 50.0% | |
| !! | ACAGCTGAGGTGCCATTGTA+AGG | - | chr8_2:59958545-59958564 | Msa1258730:intron | 50.0% |
| !! | CAGCTGAGGTGCCATTGTAA+GGG | - | chr8_2:59958546-59958565 | Msa1258730:intron | 50.0% |
| GGTATACGGGAGTCGATCTA+TGG | - | chr8_2:59958697-59958716 | Msa1258730:intron | 50.0% | |
| GGAGTCGATCTATGGTGAGA+AGG | - | chr8_2:59958705-59958724 | Msa1258730:intron | 50.0% | |
| AATCCTCTGCAAGCAGAACC+AGG | - | chr8_2:59959576-59959595 | Msa1258730:five_prime_UTR | 50.0% | |
| GCAGAACCAGGCACAATAAG+AGG | - | chr8_2:59959588-59959607 | Msa1258730:five_prime_UTR | 50.0% | |
| ! | GAAGCCATGGGCGTGTTTTG+CGG | - | chr8_2:59957519-59957538 | Msa1258730:CDS | 55.0% |
| ! | GGTGGAGCTTTTAGTGCGGA+TGG | + | chr8_2:59957700-59957719 | None:intergenic | 55.0% |
| AAACCCGATGGAGTGCAACG+TGG | - | chr8_2:59957870-59957889 | Msa1258730:intron | 55.0% | |
| AGACCACGTTGCACTCCATC+GGG | + | chr8_2:59957876-59957895 | None:intergenic | 55.0% | |
| ! | GGAGGCGTGATGCAGTTGTA+AGG | - | chr8_2:59958515-59958534 | Msa1258730:intron | 55.0% |
| ! | GAAGCCATGGGCGTGTTTTG+CGG | - | chr8_2:59957519-59957538 | Msa1258730:CDS | 55.0% |
| ! | GGTGGAGCTTTTAGTGCGGA+TGG | + | chr8_2:59957700-59957719 | None:intergenic | 55.0% |
| AAACCCGATGGAGTGCAACG+TGG | - | chr8_2:59957870-59957889 | Msa1258730:intron | 55.0% | |
| AGACCACGTTGCACTCCATC+GGG | + | chr8_2:59957876-59957895 | None:intergenic | 55.0% | |
| ! | GGAGGCGTGATGCAGTTGTA+AGG | - | chr8_2:59958515-59958534 | Msa1258730:intron | 55.0% |
| CTCTCTTTGCGTTGCGGCTG+TGG | + | chr8_2:59957485-59957504 | None:intergenic | 60.0% | |
| CACAGCCGCAACGCAAAGAG+AGG | - | chr8_2:59957483-59957502 | Msa1258730:CDS | 60.0% | |
| GCTTCCGCAAAACACGCCCA+TGG | + | chr8_2:59957526-59957545 | None:intergenic | 60.0% | |
| ! | GTAAGGGTGTGCAATGGCGG+AGG | - | chr8_2:59958497-59958516 | Msa1258730:intron | 60.0% |
| TTCGGGCCCCGTTGTGTCTA+TGG | - | chr8_2:59959413-59959432 | Msa1258730:CDS | 60.0% | |
| ! | TGCAAGGCTTGGGAGGGTGT+TGG | - | chr8_2:59959516-59959535 | Msa1258730:CDS | 60.0% |
| !! | GTGCCTGGTTCTGCTTGCAG+AGG | + | chr8_2:59959582-59959601 | None:intergenic | 60.0% |
| CTCTCTTTGCGTTGCGGCTG+TGG | + | chr8_2:59957485-59957504 | None:intergenic | 60.0% | |
| CACAGCCGCAACGCAAAGAG+AGG | - | chr8_2:59957483-59957502 | Msa1258730:CDS | 60.0% | |
| GCTTCCGCAAAACACGCCCA+TGG | + | chr8_2:59957526-59957545 | None:intergenic | 60.0% | |
| ! | GTAAGGGTGTGCAATGGCGG+AGG | - | chr8_2:59958497-59958516 | Msa1258730:intron | 60.0% |
| TTCGGGCCCCGTTGTGTCTA+TGG | - | chr8_2:59959413-59959432 | Msa1258730:CDS | 60.0% | |
| ! | TGCAAGGCTTGGGAGGGTGT+TGG | - | chr8_2:59959516-59959535 | Msa1258730:CDS | 60.0% |
| !! | GTGCCTGGTTCTGCTTGCAG+AGG | + | chr8_2:59959582-59959601 | None:intergenic | 60.0% |
| ! | GTAAGGGCACGCCACAGCTG+AGG | - | chr8_2:59958532-59958551 | Msa1258730:intron | 65.0% |
| ! | GTAAGGGCACGCCACAGCTG+AGG | - | chr8_2:59958532-59958551 | Msa1258730:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 59957452 | 59959638 | 59957452 | ID=Msa1258730;Name=Msa1258730 |
| chr8_2 | mRNA | 59957452 | 59959638 | 59957452 | ID=Msa1258730-mRNA-1;Parent=Msa1258730;Name=Msa1258730-mRNA-1;_AED=0.16;_eAED=0.16;_QI=64|1|0.8|1|1|1|5|0|194 |
| chr8_2 | exon | 59957452 | 59957568 | 59957452 | ID=Msa1258730-mRNA-1:exon:18793;Parent=Msa1258730-mRNA-1 |
| chr8_2 | exon | 59957656 | 59957736 | 59957656 | ID=Msa1258730-mRNA-1:exon:18792;Parent=Msa1258730-mRNA-1 |
| chr8_2 | exon | 59958999 | 59959085 | 59958999 | ID=Msa1258730-mRNA-1:exon:18791;Parent=Msa1258730-mRNA-1 |
| chr8_2 | exon | 59959194 | 59959250 | 59959194 | ID=Msa1258730-mRNA-1:exon:18790;Parent=Msa1258730-mRNA-1 |
| chr8_2 | exon | 59959332 | 59959638 | 59959332 | ID=Msa1258730-mRNA-1:exon:18789;Parent=Msa1258730-mRNA-1 |
| chr8_2 | five_prime_UTR | 59959575 | 59959638 | 59959575 | ID=Msa1258730-mRNA-1:five_prime_utr;Parent=Msa1258730-mRNA-1 |
| chr8_2 | CDS | 59959332 | 59959574 | 59959332 | ID=Msa1258730-mRNA-1:cds;Parent=Msa1258730-mRNA-1 |
| chr8_2 | CDS | 59959194 | 59959250 | 59959194 | ID=Msa1258730-mRNA-1:cds;Parent=Msa1258730-mRNA-1 |
| chr8_2 | CDS | 59958999 | 59959085 | 59958999 | ID=Msa1258730-mRNA-1:cds;Parent=Msa1258730-mRNA-1 |
| chr8_2 | CDS | 59957656 | 59957736 | 59957656 | ID=Msa1258730-mRNA-1:cds;Parent=Msa1258730-mRNA-1 |
| chr8_2 | CDS | 59957452 | 59957568 | 59957452 | ID=Msa1258730-mRNA-1:cds;Parent=Msa1258730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
