AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0637850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0637850 MtrunA17_Chr4g0020791 96.715 548 17 1 1 548 1 547 0.0 1092
Msa0637850 MtrunA17_Chr4g0038081 23.935 493 276 14 51 481 52 507 2.97e-25 109
Msa0637850 MtrunA17_Chr7g0256861 26.911 327 194 8 203 525 298 583 4.24e-24 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0637850 AT3G47450.2 64.841 566 176 8 1 548 1 561 0.0 697
Msa0637850 AT3G47450.1 64.488 566 178 8 1 548 1 561 0.0 694
Msa0637850 AT4G10620.1 23.185 496 276 12 86 520 79 530 4.58e-25 109

Find 154 sgRNAs with CRISPR-Local

Find 540 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAACCTTCTTCTCTTTC+TGG 0.093378 4_3:+31120048 None:intergenic
GAAGGAAATTTACAGAAATT+TGG 0.140350 4_3:-31115141 Msa0637850:three_prime_UTR
TTAGTCACAACCATTATTAT+TGG 0.202467 4_3:+31120580 None:intergenic
ATTCAAATTAATGCTTTCTT+TGG 0.211740 4_3:-31117249 Msa0637850:CDS
GGAGTGAATTTGAGGGAATT+TGG 0.227717 4_3:+31123017 None:intergenic
GAGTGAATTTGAGGGAATTT+GGG 0.249360 4_3:+31123018 None:intergenic
CAAAGCTCTAATTGTCAAAT+TGG 0.252827 4_3:-31122222 Msa0637850:intron
TTTGAGGGAATTTGGGGTTT+TGG 0.257424 4_3:+31123025 None:intergenic
TAAAATGTTAAACATGTTTC+CGG 0.262455 4_3:+31116710 None:intergenic
GGAATTCAAAAGTACCATTT+TGG 0.269489 4_3:+31115325 None:intergenic
AAAGGTGCTTCGACAGTAAA+TGG 0.298977 4_3:-31116903 Msa0637850:CDS
TAGATATAACTTACTTAATA+AGG 0.304884 4_3:+31118797 None:intergenic
GCTGTTCCTGGAACTACCTT+AGG 0.306684 4_3:-31117276 Msa0637850:CDS
GGCTTCTGGTAAGCGAGATT+TGG 0.318870 4_3:+31122957 None:intergenic
AGCACCTTTGTTTGTATTGT+CGG 0.326011 4_3:+31116917 None:intergenic
ATCTTAATTGTGTTGGGGAT+TGG 0.326100 4_3:-31120443 Msa0637850:CDS
AAGAAAGCATTAATTTGAAT+TGG 0.326794 4_3:+31117252 None:intergenic
GATAATTTCCCGTTAGAGAT+TGG 0.329774 4_3:-31123133 None:intergenic
CCAGTACAGTCTGCTGTTCC+TGG 0.333865 4_3:-31117288 Msa0637850:CDS
AAATCATTGGTAGGAATAAC+TGG 0.335779 4_3:-31120086 Msa0637850:CDS
ATATGAATTGGCATCCTCTT+AGG 0.337943 4_3:+31116683 None:intergenic
AATAATAATGGTTGTGACTA+AGG 0.353009 4_3:-31120578 Msa0637850:intron
TACTGTTGTTGTTCTGTTTG+AGG 0.355375 4_3:+31122860 None:intergenic
TCTTAATTGTGTTGGGGATT+GGG 0.360762 4_3:-31120442 Msa0637850:CDS
ACAAACCAATTCATAGGTTT+CGG 0.367199 4_3:+31122732 None:intergenic
CAAATTAATGCTTTCTTTGG+AGG 0.367521 4_3:-31117246 Msa0637850:CDS
ATACTGATCTTAATTGTGTT+GGG 0.374200 4_3:-31120449 Msa0637850:CDS
CCTCTCCGAAACCTATGAAT+TGG 0.374687 4_3:-31122737 Msa0637850:intron
CCATTACCAGTAGGCAAGGC+TGG 0.375446 4_3:-31115400 Msa0637850:CDS
GGGAAGAGATGTTTACATTC+TGG 0.376268 4_3:-31119446 Msa0637850:intron
AGAGATACAAACCAATTCAT+AGG 0.380236 4_3:+31122726 None:intergenic
GCAGCGGCTCCAGTGGCTTC+TGG 0.382837 4_3:+31122943 None:intergenic
AACATTGGTTGTTGAGAACT+TGG 0.383313 4_3:+31115216 None:intergenic
CAATTTGACAATTAGAGCTT+TGG 0.384138 4_3:+31122223 None:intergenic
CAAATGACTGCTGGCGTTCG+AGG 0.395487 4_3:+31122899 None:intergenic
CAAGGTTTGGAGTGAATTTG+AGG 0.397491 4_3:+31123009 None:intergenic
ACTGAGGGGCCTATCTTTCC+CGG 0.397514 4_3:-31117042 Msa0637850:intron
TGTTAGAATTGATGTCTTGA+AGG 0.398535 4_3:-31116847 Msa0637850:intron
ATTGGCCCTAAGGTAGTTCC+AGG 0.402457 4_3:+31117270 None:intergenic
GTTGATATTGTTGACTTCAA+TGG 0.403407 4_3:-31120643 Msa0637850:CDS
GAAAAGAGAAGGCTGAGAAC+TGG 0.412977 4_3:-31116084 Msa0637850:CDS
CCAGCCTTGCCTACTGGTAA+TGG 0.414914 4_3:+31115400 None:intergenic
TCTGTGGGCACCATATGAAT+TGG 0.416048 4_3:+31116671 None:intergenic
GCAGAGAATGAGACAAGGTT+TGG 0.421672 4_3:+31122996 None:intergenic
CTTTGTGCAGCTGCAGCCAC+TGG 0.422464 4_3:+31117318 None:intergenic
GTTCTGTTTGAGGATGAGTT+TGG 0.425972 4_3:+31122870 None:intergenic
GATACTGATCTTAATTGTGT+TGG 0.426541 4_3:-31120450 Msa0637850:CDS
TCTCACAAGTTCAAAATCAT+TGG 0.436735 4_3:-31120099 Msa0637850:CDS
AGAAAGAGGTGTTAAGAAAG+TGG 0.442252 4_3:+31123050 None:intergenic
GTGGCATCAGTTTGTTCAAA+AGG 0.443579 4_3:-31115163 Msa0637850:three_prime_UTR
ATTGCTGTCGCTTCTTGCTA+TGG 0.444708 4_3:-31122808 Msa0637850:CDS
TCTGCCCCAGCCTTGCCTAC+TGG 0.450730 4_3:+31115394 None:intergenic
AGCAGGAAATGAGACCAAAA+TGG 0.452527 4_3:-31115339 Msa0637850:CDS
GCTTGCGATATTGCTATATC+AGG 0.456295 4_3:-31115553 Msa0637850:CDS
TGGTTGCTTCAAATGACTGC+TGG 0.459608 4_3:+31122890 None:intergenic
TGGTGCTAATCCAATAATAA+TGG 0.459624 4_3:-31120590 Msa0637850:CDS
AAGAACATACCGGGAAAGAT+AGG 0.460823 4_3:+31117033 None:intergenic
GTCGCTTCTTGCTATGGCTG+TGG 0.464139 4_3:-31122802 Msa0637850:CDS
AAATCCAGGAGCGTCATTAT+CGG 0.470024 4_3:+31122762 None:intergenic
AATTCATCTGCTTTCTCTGT+GGG 0.471683 4_3:+31116656 None:intergenic
CTGTTCCTGGAACTACCTTA+GGG 0.475173 4_3:-31117275 Msa0637850:CDS
TGTTGGGGATTGGGTTGTAG+AGG 0.476151 4_3:-31120433 Msa0637850:CDS
AAAATATTGAAAATCCATTC+AGG 0.478937 4_3:+31116880 None:intergenic
TAAGAGGATGCCAATTCATA+TGG 0.485520 4_3:-31116681 Msa0637850:CDS
TTATTGTCACAGAAAGAACT+TGG 0.486062 4_3:-31116130 Msa0637850:intron
CAATTAAGATCAGTATCTCT+TGG 0.489229 4_3:+31120456 None:intergenic
AGGTGTTAAGAAAGTGGATA+GGG 0.492139 4_3:+31123056 None:intergenic
ATAACTGCTGTTGGAGGACA+TGG 0.492972 4_3:-31122317 Msa0637850:CDS
ATTAATGCTTTCTTTGGAGG+AGG 0.494082 4_3:-31117243 Msa0637850:CDS
CATTACCAGTAGGCAAGGCT+GGG 0.495878 4_3:-31115399 Msa0637850:CDS
CCAGGAACAGCAGACTGTAC+TGG 0.496203 4_3:+31117288 None:intergenic
CGTTCGAGGAACTTCTCGCC+TGG 0.498839 4_3:+31122913 None:intergenic
AGAAATCCAGAAAGAGAAGA+AGG 0.499062 4_3:-31120054 Msa0637850:intron
AGCAAGGGCGGATAGATCTT+CGG 0.500724 4_3:+31117076 None:intergenic
AAGGTTTGGAGTGAATTTGA+GGG 0.504230 4_3:+31123010 None:intergenic
CTGTGGTGGAGATGAACTCC+TGG 0.504637 4_3:+31117119 None:intergenic
TCGACAGTAAATGGCCTGAA+TGG 0.506669 4_3:-31116894 Msa0637850:CDS
GATATTGCTATATCAGGTCT+AGG 0.507163 4_3:-31115547 Msa0637850:CDS
ATTAATAATACATTTAACAT+TGG 0.507875 4_3:+31115201 None:intergenic
TGCTCCTAAAAGCCGACTGA+GGG 0.509262 4_3:-31117057 Msa0637850:CDS
TCCCGAGTGAGAGATCTTGC+TGG 0.512842 4_3:-31120610 Msa0637850:CDS
TAATGCTTTCTTTGGAGGAG+GGG 0.513509 4_3:-31117241 Msa0637850:intron
ATTAATTTGAATTGGCCCTA+AGG 0.514252 4_3:+31117260 None:intergenic
AGGATGGCTTTCTGTTGAGC+CGG 0.515806 4_3:-31115527 Msa0637850:CDS
AGGAACTTCTCGCCTGGTGA+CGG 0.516252 4_3:+31122919 None:intergenic
GAGGTGTTAAGAAAGTGGAT+AGG 0.522644 4_3:+31123055 None:intergenic
GTACGAGTATGCAGAATTAA+CGG 0.523348 4_3:-31115368 Msa0637850:CDS
ACAGCAATGGAAGATTTAAG+AGG 0.528143 4_3:+31122823 None:intergenic
GGAGCCGCTGCTCCGTCACC+AGG 0.528946 4_3:-31122931 Msa0637850:CDS
TACTGATCTTAATTGTGTTG+GGG 0.536356 4_3:-31120448 Msa0637850:CDS
CACCAGCAAGATCTCTCACT+CGG 0.537176 4_3:+31120608 None:intergenic
CATCAGTTTGTTCAAAAGGA+AGG 0.537376 4_3:-31115159 Msa0637850:three_prime_UTR
TTACAGGGTTCAGCTAATGT+TGG 0.543821 4_3:-31118840 Msa0637850:intron
GTTGTTGAGAACTTGGGTAG+AGG 0.548134 4_3:+31115223 None:intergenic
TTAATGCTTTCTTTGGAGGA+GGG 0.553702 4_3:-31117242 Msa0637850:CDS
TGACGGAGCAGCGGCTCCAG+TGG 0.554348 4_3:+31122936 None:intergenic
CAGCTTAAAACTGTTCTATG+TGG 0.554450 4_3:-31122371 Msa0637850:CDS
AATCTGTGTGACCTACCAAC+CGG 0.555680 4_3:+31115508 None:intergenic
AGTGTTAATCCTCGGTAGCA+AGG 0.556137 4_3:+31115070 None:intergenic
AGCTTAAAACTGTTCTATGT+GGG 0.557452 4_3:-31122370 Msa0637850:CDS
TTTCTGTTGAGCCGGTTGGT+AGG 0.558950 4_3:-31115519 Msa0637850:CDS
ACTTCCGATAATGACGCTCC+TGG 0.559301 4_3:-31122766 Msa0637850:CDS
TGGCTTTCTGTTGAGCCGGT+TGG 0.564204 4_3:-31115523 Msa0637850:CDS
GGAGGACATGGAGGATACTC+TGG 0.566422 4_3:-31122305 Msa0637850:CDS
TCATTATCGGAAGTTTGTAA+AGG 0.566778 4_3:+31122775 None:intergenic
ACAAGTTCAAAATCATTGGT+AGG 0.566810 4_3:-31120095 Msa0637850:CDS
AACAGGTTTGGGGACATGTA+CGG 0.568281 4_3:+31115441 None:intergenic
AGAATTAACGGATAAAGAGC+AGG 0.570013 4_3:-31115356 Msa0637850:CDS
TAAGATCAGTATCTCTTGGA+AGG 0.574434 4_3:+31120460 None:intergenic
GGTGAAATGATAACTGCTGT+TGG 0.575304 4_3:-31122326 Msa0637850:CDS
GCCTTGCCTACTGGTAATGG+TGG 0.579377 4_3:+31115403 None:intergenic
ATATTTGATACCAGAGACAA+TGG 0.580022 4_3:-31117352 Msa0637850:intron
TAAAATTTGAAGATACTGAA+AGG 0.581028 4_3:-31116030 Msa0637850:intron
TTGCTCCTAAAAGCCGACTG+AGG 0.582175 4_3:-31117058 Msa0637850:CDS
GTGTTAATCCTCGGTAGCAA+GGG 0.588070 4_3:+31115071 None:intergenic
CCCACCAAGTGGAAAAGAGA+AGG 0.589412 4_3:-31116095 Msa0637850:CDS
AAATTCATCTGCTTTCTCTG+TGG 0.589837 4_3:+31116655 None:intergenic
GCCACCATTACCAGTAGGCA+AGG 0.591193 4_3:-31115404 Msa0637850:CDS
CAACTGCAGTTTGCCTGTGG+TGG 0.591370 4_3:+31117105 None:intergenic
GATATAGCAATATCGCAAGC+TGG 0.591658 4_3:+31115556 None:intergenic
TTTCACCATGAGACAAAAGC+TGG 0.591764 4_3:+31122342 None:intergenic
AAATTTCACCCTTGCTACCG+AGG 0.594389 4_3:-31115079 Msa0637850:three_prime_UTR
TCTGGTAAGCGAGATTTGGA+AGG 0.595760 4_3:+31122961 None:intergenic
AGTGAATTTGAGGGAATTTG+GGG 0.596642 4_3:+31123019 None:intergenic
TCTCGCTTACCAGAAGCCAC+TGG 0.598808 4_3:-31122952 Msa0637850:CDS
GTTTCGGAGAGGACAAATCC+AGG 0.598853 4_3:+31122748 None:intergenic
CAGGAGTTCATCTCCACCAC+AGG 0.599540 4_3:-31117118 Msa0637850:CDS
CTCGCCTGGTGACGGAGCAG+CGG 0.600406 4_3:+31122927 None:intergenic
TTGCTATATCAGGTCTAGGA+TGG 0.601269 4_3:-31115543 Msa0637850:CDS
CAGAAACTGTATGACACTCC+AGG 0.601341 4_3:-31117137 Msa0637850:CDS
GTAAAAGTAGTGTTAATCCT+CGG 0.611569 4_3:+31115062 None:intergenic
ACGAGGCCACCATTACCAGT+AGG 0.618637 4_3:-31115409 Msa0637850:CDS
ACATTGGTTGTTGAGAACTT+GGG 0.620938 4_3:+31115217 None:intergenic
ATAGCAAGAAGCGACAGCAA+TGG 0.623360 4_3:+31122810 None:intergenic
GGAAAGATAGGCCCCTCAGT+CGG 0.624772 4_3:+31117045 None:intergenic
CTTTCCGACAATACAAACAA+AGG 0.637415 4_3:-31116921 Msa0637850:CDS
GAGAAGGCTGAGAACTGGAG+AGG 0.643970 4_3:-31116079 Msa0637850:CDS
GAAATGATAACTGCTGTTGG+AGG 0.645323 4_3:-31122323 Msa0637850:CDS
TTAAAACTGTTCTATGTGGG+CGG 0.648875 4_3:-31122367 Msa0637850:CDS
TAGGCAAGGCTGGGGCAGAG+TGG 0.653975 4_3:-31115390 Msa0637850:CDS
ACCAGCAAGATCTCTCACTC+GGG 0.656086 4_3:+31120609 None:intergenic
ATTACCAGTAGGCAAGGCTG+GGG 0.666863 4_3:-31115398 Msa0637850:CDS
AGGGCGGATAGATCTTCGGA+AGG 0.672784 4_3:+31117080 None:intergenic
ACTGCTGTTGGAGGACATGG+AGG 0.674606 4_3:-31122314 Msa0637850:CDS
GGACATGGAGGATACTCTGG+CGG 0.680136 4_3:-31122302 Msa0637850:CDS
GAACAACTGCAGTTTGCCTG+TGG 0.695137 4_3:+31117102 None:intergenic
AATGGCATATAATGATCCAG+TGG 0.696160 4_3:-31117334 Msa0637850:CDS
GCTCCTAAAAGCCGACTGAG+GGG 0.696766 4_3:-31117056 Msa0637850:CDS
TAATGTGACTAATACAACCG+TGG 0.704566 4_3:-31115182 Msa0637850:three_prime_UTR
GTTCTGCTAATCCCACCAAG+TGG 0.707656 4_3:-31116106 Msa0637850:CDS
CCAATTCATAGGTTTCGGAG+AGG 0.711908 4_3:+31122737 None:intergenic
AAAATGCAATAGACACTACG+GGG 0.715177 4_3:-31115477 Msa0637850:CDS
AAATGCAATAGACACTACGG+GGG 0.738854 4_3:-31115476 Msa0637850:CDS
AATTCGCAGAGAATGAGACA+AGG 0.739526 4_3:+31122991 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTGAAG+AGG + chr4_3:31117997-31118016 None:intergenic 10.0%
!! AATGATACAATTTAATATAT+TGG + chr4_3:31119063-31119082 None:intergenic 10.0%
!! TAAGATTTGTATTATATAAA+TGG + chr4_3:31119231-31119250 None:intergenic 10.0%
!! AATAAAAGAATTATTCAATA+TGG + chr4_3:31119321-31119340 None:intergenic 10.0%
!!! AATAATTCTTTTATTTTACA+GGG - chr4_3:31119326-31119345 Msa0637850:intron 10.0%
!!! TTAACATTTAATTTGTTATA+AGG - chr4_3:31121696-31121715 Msa0637850:intron 10.0%
!!! ATTTTTGAAAAAAAAAGTAA+AGG - chr4_3:31121967-31121986 Msa0637850:intron 10.0%
!!! GAATTATTTTAAAGAAATTT+AGG - chr4_3:31122419-31122438 Msa0637850:intron 10.0%
!!! ATTATTTTAAAGAAATTTAG+GGG - chr4_3:31122421-31122440 Msa0637850:intron 10.0%
!! ATTAATAATACATTTAACAT+TGG + chr4_3:31122983-31123002 None:intergenic 10.0%
!!! TTTTTCAAATTATTACATGT+CGG - chr4_3:31115519-31115538 Msa0637850:CDS 15.0%
!!! CATTTTTGTTCTTATAAAAT+TGG - chr4_3:31116075-31116094 Msa0637850:CDS 15.0%
!!! AGTTTATAAAAATTTGTTGA+TGG + chr4_3:31116128-31116147 None:intergenic 15.0%
!!! CTTTTTTTTATGATAAGAAT+AGG + chr4_3:31116639-31116658 None:intergenic 15.0%
!!! TTTTTTTCGAAACAAATTAT+TGG + chr4_3:31116820-31116839 None:intergenic 15.0%
!!! ACTAGAAAACTTTTAAAATT+TGG - chr4_3:31117078-31117097 Msa0637850:CDS 15.0%
!!! CTAGAAAACTTTTAAAATTT+GGG - chr4_3:31117079-31117098 Msa0637850:CDS 15.0%
!!! AATTAGTGTTGATAATAATT+AGG - chr4_3:31118343-31118362 Msa0637850:intron 15.0%
!!! GAATAATTCTTTTATTTTAC+AGG - chr4_3:31119325-31119344 Msa0637850:intron 15.0%
!! TAGATATAACTTACTTAATA+AGG + chr4_3:31119387-31119406 None:intergenic 15.0%
!! TTGATTAATAACCATTATAA+AGG - chr4_3:31119767-31119786 Msa0637850:intron 15.0%
!! TGATTAATAACCATTATAAA+GGG - chr4_3:31119768-31119787 Msa0637850:intron 15.0%
!!! GTTTTTTTGAATTTAAAACA+AGG + chr4_3:31120185-31120204 None:intergenic 15.0%
!! AAAAAAAAAACTGTTGAAAT+AGG - chr4_3:31120693-31120712 Msa0637850:intron 15.0%
!! AAAAAAAAAAAAGAGTAAAC+AGG + chr4_3:31121000-31121019 None:intergenic 15.0%
!! ATGCTAATTAAATAGTTATT+TGG + chr4_3:31121941-31121960 None:intergenic 15.0%
!! TTCATTAATGAAATTATAGT+CGG - chr4_3:31122329-31122348 Msa0637850:CDS 15.0%
!! TTATCTACTAATCATAATAT+TGG + chr4_3:31122572-31122591 None:intergenic 15.0%
!!! TTTTTCCTTTTACTTATTTT+TGG - chr4_3:31122891-31122910 Msa0637850:CDS 15.0%
!!! TTTTCCTTTTACTTATTTTT+GGG - chr4_3:31122892-31122911 Msa0637850:CDS 15.0%
!! GTAATTCAATGATGTTATAA+CGG + chr4_3:31115494-31115513 None:intergenic 20.0%
!!! TTTTAGTTTTCTTATACACT+GGG - chr4_3:31116215-31116234 Msa0637850:intron 20.0%
!!! AGTAGATTTTTTTTTTGAGT+AGG + chr4_3:31116310-31116329 None:intergenic 20.0%
!! TAAATTGTAGTCATGATTTA+TGG + chr4_3:31116398-31116417 None:intergenic 20.0%
!!! ATATGAGAAAGTATTTTGTA+TGG + chr4_3:31116475-31116494 None:intergenic 20.0%
!! ACTTTCTCATATAAAATTGT+CGG - chr4_3:31116483-31116502 Msa0637850:intron 20.0%
!! TCATAAAAAAAAGACAGAAA+AGG - chr4_3:31116646-31116665 Msa0637850:intron 20.0%
!! AACTATTTGACAAATAATTC+AGG - chr4_3:31117320-31117339 Msa0637850:CDS 20.0%
!! ACAAAATGTTGTGATAATAT+TGG + chr4_3:31117415-31117434 None:intergenic 20.0%
!! TTAGTTTCATTATTGCTAAT+TGG + chr4_3:31117472-31117491 None:intergenic 20.0%
!! TTAGCAATAATGAAACTAAA+AGG - chr4_3:31117473-31117492 Msa0637850:intron 20.0%
!! AAAGGTAATGATTAATACAA+AGG + chr4_3:31117806-31117825 None:intergenic 20.0%
!! AAATCAGTTAAAAGGAAAAA+AGG + chr4_3:31118175-31118194 None:intergenic 20.0%
!!! TAGCTTTTAGTATTACATTT+AGG - chr4_3:31118250-31118269 Msa0637850:intron 20.0%
!! AATCAACACCTTTATAAATA+TGG + chr4_3:31118305-31118324 None:intergenic 20.0%
!! AAAATAAATCGAATTTCAGT+AGG + chr4_3:31118705-31118724 None:intergenic 20.0%
!!! GATTTATTTTCCTTTTTGTA+GGG - chr4_3:31118715-31118734 Msa0637850:intron 20.0%
!! TTAATCCAAATGTTTACAAA+AGG + chr4_3:31119413-31119432 None:intergenic 20.0%
!! AATAAAGGTAAGCATAATTT+AGG + chr4_3:31120256-31120275 None:intergenic 20.0%
!!! CAATTTGATGATTTAGAATT+CGG + chr4_3:31120279-31120298 None:intergenic 20.0%
!!! CATTATTTTGAACATAATCA+TGG + chr4_3:31120351-31120370 None:intergenic 20.0%
!! AAGCATTAGATTAAATTACA+TGG + chr4_3:31120551-31120570 None:intergenic 20.0%
!!! TTTATCATTTTGACAATTTC+AGG - chr4_3:31120771-31120790 Msa0637850:intron 20.0%
!!! AAGAAAGCATTAATTTGAAT+TGG + chr4_3:31120932-31120951 None:intergenic 20.0%
!! ATTCAAATTAATGCTTTCTT+TGG - chr4_3:31120932-31120951 Msa0637850:intron 20.0%
!! AAAATATTGAAAATCCATTC+AGG + chr4_3:31121304-31121323 None:intergenic 20.0%
!!! TGAATGGATTTTCAATATTT+TGG - chr4_3:31121303-31121322 Msa0637850:intron 20.0%
!!! GAATGGATTTTCAATATTTT+GGG - chr4_3:31121304-31121323 Msa0637850:intron 20.0%
!!! AATGGATTTTCAATATTTTG+GGG - chr4_3:31121305-31121324 Msa0637850:intron 20.0%
!! TAAAATGTTAAACATGTTTC+CGG + chr4_3:31121474-31121493 None:intergenic 20.0%
!!! GAAACATGTTTAACATTTTA+CGG - chr4_3:31121474-31121493 Msa0637850:intron 20.0%
!!! AAACATGTTTAACATTTTAC+GGG - chr4_3:31121475-31121494 Msa0637850:intron 20.0%
!!! ACTTTTTTTATCCATAACAA+TGG + chr4_3:31121747-31121766 None:intergenic 20.0%
!! TGATATTCAATAATTATGAC+TGG - chr4_3:31121772-31121791 Msa0637850:intron 20.0%
!! TAAAATTTGAAGATACTGAA+AGG - chr4_3:31122151-31122170 Msa0637850:intron 20.0%
!!! TCATAGAAAAAAATCTGTTT+TGG - chr4_3:31122259-31122278 Msa0637850:CDS 20.0%
!!! CATAGAAAAAAATCTGTTTT+GGG - chr4_3:31122260-31122279 Msa0637850:CDS 20.0%
!! CAGACAAGAAAAAATTATAT+TGG - chr4_3:31122285-31122304 Msa0637850:CDS 20.0%
!!! TTTCCTTTTACTTATTTTTG+GGG - chr4_3:31122893-31122912 Msa0637850:CDS 20.0%
!! AAAACTTCCATTAAAAGTGT+GGG + chr4_3:31115596-31115615 None:intergenic 25.0%
!! TTTTCTTTATGCTGTTAGAT+TGG - chr4_3:31116001-31116020 Msa0637850:intron 25.0%
!! ATTGAATCTCATGGTATTTT+AGG - chr4_3:31116030-31116049 Msa0637850:intron 25.0%
!!! ATAAAAATTTGTTGATGGCA+AGG + chr4_3:31116123-31116142 None:intergenic 25.0%
!!! ATTTTTCACTCCTTTGTTTT+AGG - chr4_3:31116161-31116180 Msa0637850:intron 25.0%
! AATTACAGTACCTAAAACAA+AGG + chr4_3:31116174-31116193 None:intergenic 25.0%
! GTGTATAAGAAAACTAAAAC+CGG + chr4_3:31116214-31116233 None:intergenic 25.0%
!!! GTTTTAGTTTTCTTATACAC+TGG - chr4_3:31116214-31116233 Msa0637850:intron 25.0%
!!! TTTAGTTTTCTTATACACTG+GGG - chr4_3:31116216-31116235 Msa0637850:intron 25.0%
!!! GAAGATTTAAGACAAGTTTT+TGG - chr4_3:31116677-31116696 Msa0637850:CDS 25.0%
!! TCAACAATTTTCAATTGTCT+AGG - chr4_3:31116917-31116936 Msa0637850:CDS 25.0%
! ATATTAGTGTTTAATGAGCT+AGG + chr4_3:31117057-31117076 None:intergenic 25.0%
!! CATTTGAAAAAGTTTTTGTG+AGG + chr4_3:31117120-31117139 None:intergenic 25.0%
!!! CAAAAACTTTTTCAAATGTG+CGG - chr4_3:31117122-31117141 Msa0637850:CDS 25.0%
!! GCTAATTGGTAATAAAGAAA+AGG + chr4_3:31117458-31117477 None:intergenic 25.0%
! TTAGTCACAACCATTATTAT+TGG + chr4_3:31117604-31117623 None:intergenic 25.0%
! AATAATAATGGTTGTGACTA+AGG - chr4_3:31117603-31117622 Msa0637850:intron 25.0%
! TAAAAGAATGTACTCTTTGT+AGG - chr4_3:31117691-31117710 Msa0637850:intron 25.0%
! ATACTGATCTTAATTGTGTT+GGG - chr4_3:31117732-31117751 Msa0637850:intron 25.0%
! GTTATAATTTAAGAGTGAGA+AGG - chr4_3:31117873-31117892 Msa0637850:intron 25.0%
!! GCAAATTTCTCATACATTTT+GGG - chr4_3:31117895-31117914 Msa0637850:intron 25.0%
!! TATAAAGTGTCACAAAGAAT+TGG + chr4_3:31117952-31117971 None:intergenic 25.0%
!! AAGGTTTGTTTATCCTTTAA+GGG - chr4_3:31118146-31118165 Msa0637850:intron 25.0%
! AAGAACTGAAATCAGTTAAA+AGG + chr4_3:31118183-31118202 None:intergenic 25.0%
!! AAATCATCAAGAGATTTTCT+GGG - chr4_3:31118211-31118230 Msa0637850:intron 25.0%
! ACTGTCATCCATATTTATAA+AGG - chr4_3:31118294-31118313 Msa0637850:intron 25.0%
! AGAAAATACCATGATGATTT+AGG - chr4_3:31118598-31118617 Msa0637850:intron 25.0%
! GAAAATACCATGATGATTTA+GGG - chr4_3:31118599-31118618 Msa0637850:intron 25.0%
!!! CGATTTATTTTCCTTTTTGT+AGG - chr4_3:31118714-31118733 Msa0637850:intron 25.0%
! TAAATGAGATGAGATACAAA+AGG + chr4_3:31119151-31119170 None:intergenic 25.0%
! ATGGAAGCTTAAAATACAAA+GGG + chr4_3:31119212-31119231 None:intergenic 25.0%
! AATGGAAGCTTAAAATACAA+AGG + chr4_3:31119213-31119232 None:intergenic 25.0%
! GTAGAAGCTTAAAATACAAA+GGG + chr4_3:31119278-31119297 None:intergenic 25.0%
! AGTAGAAGCTTAAAATACAA+AGG + chr4_3:31119279-31119298 None:intergenic 25.0%
! GAATTATTCAATATGGTTCT+TGG + chr4_3:31119314-31119333 None:intergenic 25.0%
!! TACATCCTTTTGTAAACATT+TGG - chr4_3:31119405-31119424 Msa0637850:intron 25.0%
!! GTTTTCTACAATTGAAAAGT+TGG - chr4_3:31119492-31119511 Msa0637850:intron 25.0%
! TAATGGTTATTAATCAAAGC+GGG + chr4_3:31119961-31119980 None:intergenic 25.0%
! CTAATGGTTATTAATCAAAG+CGG + chr4_3:31119962-31119981 None:intergenic 25.0%
! TCACGAGTAATTTAATCTAA+TGG + chr4_3:31119978-31119997 None:intergenic 25.0%
!! TGATTTAGAATTCGGAATAA+AGG + chr4_3:31120271-31120290 None:intergenic 25.0%
!! TTTTACTTAGCATGTGAAAA+CGG - chr4_3:31120398-31120417 Msa0637850:intron 25.0%
! ATAAGAAGCAAATCTAATCA+CGG - chr4_3:31120525-31120544 Msa0637850:intron 25.0%
! AAAACTGTTGAAATAGGTAA+TGG - chr4_3:31120699-31120718 Msa0637850:intron 25.0%
! CAAATATTAAAAGGTCAAGA+TGG + chr4_3:31120816-31120835 None:intergenic 25.0%
! CTCTGGTATCAAATATTAAA+AGG + chr4_3:31120825-31120844 None:intergenic 25.0%
!!! TTATCAGTCTTGATGATTTT+AGG - chr4_3:31121443-31121462 Msa0637850:intron 25.0%
!! TATTTCATGTTTTCCAATTC+AGG - chr4_3:31121719-31121738 Msa0637850:intron 25.0%
!! ATTTCATGTTTTCCAATTCA+GGG - chr4_3:31121720-31121739 Msa0637850:intron 25.0%
!!! ACATATTACCCATTTTTTAG+TGG - chr4_3:31121795-31121814 Msa0637850:intron 25.0%
!!! CATATTACCCATTTTTTAGT+GGG - chr4_3:31121796-31121815 Msa0637850:intron 25.0%
! ATTCAATAATTATGGATGGA+TGG + chr4_3:31121828-31121847 None:intergenic 25.0%
! ATCCATCCATAATTATTGAA+TGG - chr4_3:31121827-31121846 Msa0637850:intron 25.0%
! TACCATTCAATAATTATGGA+TGG + chr4_3:31121832-31121851 None:intergenic 25.0%
! CTCTTACCATTCAATAATTA+TGG + chr4_3:31121836-31121855 None:intergenic 25.0%
! TTCTTAATAGAGACCTAATT+TGG + chr4_3:31122183-31122202 None:intergenic 25.0%
! TAAAATGAAAGCTCTATCTA+GGG - chr4_3:31122205-31122224 Msa0637850:intron 25.0%
! GAATATCCATCCATTAATAA+CGG - chr4_3:31122359-31122378 Msa0637850:CDS 25.0%
!! GGATTTTATCTTTAACGAAT+TGG - chr4_3:31122393-31122412 Msa0637850:intron 25.0%
! ATAAATGACTTGAGAATTAG+GGG + chr4_3:31122542-31122561 None:intergenic 25.0%
! CATAAATGACTTGAGAATTA+GGG + chr4_3:31122543-31122562 None:intergenic 25.0%
! AAAAAATGCAATAGACACTA+CGG - chr4_3:31122702-31122721 Msa0637850:intron 25.0%
! AAGGAAAAACAAAGAATACA+CGG + chr4_3:31122880-31122899 None:intergenic 25.0%
!!! TTCCTTTTACTTATTTTTGG+GGG - chr4_3:31122894-31122913 Msa0637850:CDS 25.0%
! GAAGGAAATTTACAGAAATT+TGG - chr4_3:31123040-31123059 Msa0637850:CDS 25.0%
TCATTATCGGAAGTTTGTAA+AGG + chr4_3:31115409-31115428 None:intergenic 30.0%
ACAAACCAATTCATAGGTTT+CGG + chr4_3:31115452-31115471 None:intergenic 30.0%
AGAGATACAAACCAATTCAT+AGG + chr4_3:31115458-31115477 None:intergenic 30.0%
AATTATTACATGTCGGTGTA+TGG - chr4_3:31115526-31115545 Msa0637850:CDS 30.0%
CAAAACTTCCATTAAAAGTG+TGG + chr4_3:31115597-31115616 None:intergenic 30.0%
CTTCATAGCTTCTATCTTAT+CGG - chr4_3:31115703-31115722 Msa0637850:intron 30.0%
! GGAACATTAAAATTTTCCAC+TGG - chr4_3:31115724-31115743 Msa0637850:intron 30.0%
AGCTTAAAACTGTTCTATGT+GGG - chr4_3:31115811-31115830 Msa0637850:intron 30.0%
! CAATTTTTGTCGAAGATCTT+CGG + chr4_3:31115922-31115941 None:intergenic 30.0%
CAATTTGACAATTAGAGCTT+TGG + chr4_3:31115961-31115980 None:intergenic 30.0%
! CAAAGCTCTAATTGTCAAAT+TGG - chr4_3:31115959-31115978 Msa0637850:intron 30.0%
TGGATAAGAATTGAATCTCA+TGG - chr4_3:31116021-31116040 Msa0637850:intron 30.0%
! GAAAATCCAGATACTTTTGT+AGG - chr4_3:31116052-31116071 Msa0637850:CDS 30.0%
!! AAAATGCCTACAAAAGTATC+TGG + chr4_3:31116061-31116080 None:intergenic 30.0%
GTAGTCATGATTTATGGATA+AGG + chr4_3:31116392-31116411 None:intergenic 30.0%
GTGATCTTAATAGAAAACAG+AGG - chr4_3:31116431-31116450 Msa0637850:intron 30.0%
!! CTCAAGACTTCTTTTGAAAA+GGG + chr4_3:31116564-31116583 None:intergenic 30.0%
!! ACTCAAGACTTCTTTTGAAA+AGG + chr4_3:31116565-31116584 None:intergenic 30.0%
AAGTCTTGAGTTTATACAGT+TGG - chr4_3:31116574-31116593 Msa0637850:intron 30.0%
TATGAAATGTGCGTCTAAAA+TGG - chr4_3:31116716-31116735 Msa0637850:CDS 30.0%
ATGTTACTCTAACCCTAAAT+CGG + chr4_3:31116796-31116815 None:intergenic 30.0%
CGTAGGTGAAATATTAACTA+AGG - chr4_3:31116943-31116962 Msa0637850:intron 30.0%
!! AAGTTTTTGTGAGGTTGATT+TGG + chr4_3:31117111-31117130 None:intergenic 30.0%
CCAAGTACAATTTGTAACAT+AGG + chr4_3:31117254-31117273 None:intergenic 30.0%
CCTATGTTACAAATTGTACT+TGG - chr4_3:31117251-31117270 Msa0637850:CDS 30.0%
ATGTTACAAATTGTACTTGG+AGG - chr4_3:31117254-31117273 Msa0637850:CDS 30.0%
! TGAATAATCTGACTTGACTT+TGG - chr4_3:31117285-31117304 Msa0637850:CDS 30.0%
AGGCTATGCAAACAAATTAA+TGG - chr4_3:31117340-31117359 Msa0637850:CDS 30.0%
!!! TACGCTCTAATTTTTTTCGA+TGG - chr4_3:31117369-31117388 Msa0637850:intron 30.0%
AATATTGGACTCTTAGCTAA+CGG + chr4_3:31117400-31117419 None:intergenic 30.0%
!! GTTGATATTGTTGACTTCAA+TGG - chr4_3:31117538-31117557 Msa0637850:intron 30.0%
! TGGTGCTAATCCAATAATAA+TGG - chr4_3:31117591-31117610 Msa0637850:intron 30.0%
CAATTAAGATCAGTATCTCT+TGG + chr4_3:31117728-31117747 None:intergenic 30.0%
GATACTGATCTTAATTGTGT+TGG - chr4_3:31117731-31117750 Msa0637850:intron 30.0%
TACTGATCTTAATTGTGTTG+GGG - chr4_3:31117733-31117752 Msa0637850:intron 30.0%
CCACAAATTAGTAACTTCAA+AGG + chr4_3:31117824-31117843 None:intergenic 30.0%
!! CCTTTGAAGTTACTAATTTG+TGG - chr4_3:31117821-31117840 Msa0637850:intron 30.0%
! GGCAAATTTCTCATACATTT+TGG - chr4_3:31117894-31117913 Msa0637850:intron 30.0%
! ATGATTTTGAACTTGTGAGA+TGG + chr4_3:31118082-31118101 None:intergenic 30.0%
TCTCACAAGTTCAAAATCAT+TGG - chr4_3:31118082-31118101 Msa0637850:intron 30.0%
ACAAGTTCAAAATCATTGGT+AGG - chr4_3:31118086-31118105 Msa0637850:intron 30.0%
AAATCATTGGTAGGAATAAC+TGG - chr4_3:31118095-31118114 Msa0637850:intron 30.0%
! GAAGGTTTGTTTATCCTTTA+AGG - chr4_3:31118145-31118164 Msa0637850:intron 30.0%
! GAAATCATCAAGAGATTTTC+TGG - chr4_3:31118210-31118229 Msa0637850:intron 30.0%
!!! AGGAATCTTTTTTGCATTTC+AGG - chr4_3:31118363-31118382 Msa0637850:intron 30.0%
AATGAACTTGTCAAATGTCA+AGG - chr4_3:31118388-31118407 Msa0637850:intron 30.0%
ATGAACTTGTCAAATGTCAA+GGG - chr4_3:31118389-31118408 Msa0637850:intron 30.0%
! TTTCCTCTTGTCAAAAGTAT+TGG - chr4_3:31118481-31118500 Msa0637850:intron 30.0%
! TTTCCAATACTTTTGACAAG+AGG + chr4_3:31118487-31118506 None:intergenic 30.0%
CTAAACAGTGTTATCTATGA+CGG + chr4_3:31118968-31118987 None:intergenic 30.0%
TAGATAACACTGTTTAGAAG+AGG - chr4_3:31118971-31118990 Msa0637850:intron 30.0%
!! ATGTTTTTACTACGTTGTTC+TGG - chr4_3:31119013-31119032 Msa0637850:intron 30.0%
CTTCCATAAATGGTTTAGAT+TGG + chr4_3:31119116-31119135 None:intergenic 30.0%
ACAGATGAATCTTCCATAAA+TGG + chr4_3:31119126-31119145 None:intergenic 30.0%
TTCTCTTAATTGACAAGTTG+TGG - chr4_3:31119444-31119463 Msa0637850:intron 30.0%
CAATTGTAGAAAACGCATAA+AGG + chr4_3:31119486-31119505 None:intergenic 30.0%
AATGCAAACAATGACTACAA+TGG + chr4_3:31119524-31119543 None:intergenic 30.0%
!! GTGCTTTAATTTTGATGTGA+TGG - chr4_3:31119580-31119599 Msa0637850:intron 30.0%
! ATCATGGATTTTTGCAATTG+TGG + chr4_3:31120335-31120354 None:intergenic 30.0%
TTTACTTAGCATGTGAAAAC+GGG - chr4_3:31120399-31120418 Msa0637850:intron 30.0%
ATATTTGATACCAGAGACAA+TGG - chr4_3:31120829-31120848 Msa0637850:intron 30.0%
! ATTAATTTGAATTGGCCCTA+AGG + chr4_3:31120924-31120943 None:intergenic 30.0%
CAAATTAATGCTTTCTTTGG+AGG - chr4_3:31120935-31120954 Msa0637850:intron 30.0%
AGTATTTGAAAGAACATACC+GGG + chr4_3:31121160-31121179 None:intergenic 30.0%
CAGTATTTGAAAGAACATAC+CGG + chr4_3:31121161-31121180 None:intergenic 30.0%
TGTTAGAATTGATGTCTTGA+AGG - chr4_3:31121334-31121353 Msa0637850:intron 30.0%
AGTTTGTACTTTCATGTCAT+AGG - chr4_3:31121378-31121397 Msa0637850:intron 30.0%
ATCAAGACTGATAACTTCAA+GGG + chr4_3:31121437-31121456 None:intergenic 30.0%
! GAAAGCAGATGAATTTTATC+AGG - chr4_3:31121533-31121552 Msa0637850:intron 30.0%
TTATTGTCACAGAAAGAACT+TGG - chr4_3:31122051-31122070 Msa0637850:intron 30.0%
! TGAAAGGTATACTCCAAATT+AGG - chr4_3:31122167-31122186 Msa0637850:intron 30.0%
GTAAAATGAAAGCTCTATCT+AGG - chr4_3:31122204-31122223 Msa0637850:intron 30.0%
TTCAATCCATCCGTTATTAA+TGG + chr4_3:31122372-31122391 None:intergenic 30.0%
!! TTAATAACGGATGGATTGAA+TGG - chr4_3:31122372-31122391 Msa0637850:CDS 30.0%
AGAAATTTAGGGGATTGTAA+TGG - chr4_3:31122431-31122450 Msa0637850:intron 30.0%
AATATGGATTTGGATGGAAA+TGG + chr4_3:31122480-31122499 None:intergenic 30.0%
GATTTGGAAGAATATGGATT+TGG + chr4_3:31122490-31122509 None:intergenic 30.0%
GATATGGATTTGGAAGAATA+TGG + chr4_3:31122496-31122515 None:intergenic 30.0%
GATTTAGATGGATATGGATT+TGG + chr4_3:31122506-31122525 None:intergenic 30.0%
ATGGATGATTTAGATGGATA+TGG + chr4_3:31122512-31122531 None:intergenic 30.0%
GCATAAATGACTTGAGAATT+AGG + chr4_3:31122544-31122563 None:intergenic 30.0%
AAAAATGCAATAGACACTAC+GGG - chr4_3:31122703-31122722 Msa0637850:intron 30.0%
TAAAAATCTCAACAGGTTTG+GGG + chr4_3:31122753-31122772 None:intergenic 30.0%
GTAAAAATCTCAACAGGTTT+GGG + chr4_3:31122754-31122773 None:intergenic 30.0%
!!! GGAATTCAAAAGTACCATTT+TGG + chr4_3:31122859-31122878 None:intergenic 30.0%
!!! TCCTTTTACTTATTTTTGGG+GGG - chr4_3:31122895-31122914 Msa0637850:CDS 30.0%
GTAAAAGTAGTGTTAATCCT+CGG + chr4_3:31123122-31123141 None:intergenic 30.0%
AAGCTCATCATCATCATCAA+TGG - chr4_3:31115093-31115112 Msa0637850:three_prime_UTR 35.0%
AGGTGTTAAGAAAGTGGATA+GGG + chr4_3:31115128-31115147 None:intergenic 35.0%
!! AGAAAGAGGTGTTAAGAAAG+TGG + chr4_3:31115134-31115153 None:intergenic 35.0%
AGTGAATTTGAGGGAATTTG+GGG + chr4_3:31115165-31115184 None:intergenic 35.0%
GAGTGAATTTGAGGGAATTT+GGG + chr4_3:31115166-31115185 None:intergenic 35.0%
! AAGGTTTGGAGTGAATTTGA+GGG + chr4_3:31115174-31115193 None:intergenic 35.0%
! TACTGTTGTTGTTCTGTTTG+AGG + chr4_3:31115324-31115343 None:intergenic 35.0%
ACAGCAATGGAAGATTTAAG+AGG + chr4_3:31115361-31115380 None:intergenic 35.0%
AGATTGCTTCTATCCTATCT+AGG - chr4_3:31115569-31115588 Msa0637850:intron 35.0%
AAGATAGAAGCTATGAAGCA+CGG + chr4_3:31115701-31115720 None:intergenic 35.0%
TGTAATTCAGAAACAACCAG+TGG + chr4_3:31115743-31115762 None:intergenic 35.0%
!!! CACATAGAACAGTTTTAAGC+TGG + chr4_3:31115812-31115831 None:intergenic 35.0%
CAGCTTAAAACTGTTCTATG+TGG - chr4_3:31115810-31115829 Msa0637850:intron 35.0%
TTAAAACTGTTCTATGTGGG+CGG - chr4_3:31115814-31115833 Msa0637850:intron 35.0%
! TTGCATTTAAAACGAGTCTC+CGG - chr4_3:31116192-31116211 Msa0637850:intron 35.0%
TGTGTGACTGATGTAAATTC+CGG - chr4_3:31116268-31116287 Msa0637850:intron 35.0%
AGGAATCATACTCATCATTC+CGG + chr4_3:31116290-31116309 None:intergenic 35.0%
ACGCACATTTCATACTTTCA+GGG + chr4_3:31116710-31116729 None:intergenic 35.0%
! AATGTGCGTCTAAAATGGAT+TGG - chr4_3:31116721-31116740 Msa0637850:intron 35.0%
TTAGTATGCTCGCTGATATT+TGG - chr4_3:31116874-31116893 Msa0637850:CDS 35.0%
TTCAATTGTCTAGGTTTCGT+AGG - chr4_3:31116926-31116945 Msa0637850:CDS 35.0%
TTAGTGTTTAATGAGCTAGG+AGG + chr4_3:31117054-31117073 None:intergenic 35.0%
!!! GAATGCTAGTTTTCAGCAAT+TGG - chr4_3:31117158-31117177 Msa0637850:intron 35.0%
! GTTTTCAGCAATTGGATGAT+CGG - chr4_3:31117166-31117185 Msa0637850:intron 35.0%
! AAATTGTACTTGGAGGCTTT+TGG - chr4_3:31117261-31117280 Msa0637850:CDS 35.0%
!! TCTGACTTGACTTTGGAATT+TGG - chr4_3:31117292-31117311 Msa0637850:CDS 35.0%
TTGTTGAGATAACCACTTCT+AGG - chr4_3:31117516-31117535 Msa0637850:intron 35.0%
CAACAATATCAACCTAGAAG+TGG + chr4_3:31117531-31117550 None:intergenic 35.0%
ATGGTTGTGACTAAGGTAAT+AGG - chr4_3:31117610-31117629 Msa0637850:intron 35.0%
! CTAAGGTAATAGGACGTTTT+TGG - chr4_3:31117620-31117639 Msa0637850:intron 35.0%
TAAGATCAGTATCTCTTGGA+AGG + chr4_3:31117724-31117743 None:intergenic 35.0%
ATCTTAATTGTGTTGGGGAT+TGG - chr4_3:31117738-31117757 Msa0637850:intron 35.0%
TCTTAATTGTGTTGGGGATT+GGG - chr4_3:31117739-31117758 Msa0637850:intron 35.0%
TACCATGTTGTTCAGTTATC+TGG - chr4_3:31117849-31117868 Msa0637850:intron 35.0%
ACTGCAATGAATACAAGCAA+TGG + chr4_3:31118048-31118067 None:intergenic 35.0%
AGAAATCCAGAAAGAGAAGA+AGG - chr4_3:31118127-31118146 Msa0637850:intron 35.0%
AACAAACCTTCTTCTCTTTC+TGG + chr4_3:31118136-31118155 None:intergenic 35.0%
TAGGATGACAAACTTTCTGT+CGG - chr4_3:31118269-31118288 Msa0637850:intron 35.0%
TTCCTACTGAGTATCTCAAA+AGG + chr4_3:31118429-31118448 None:intergenic 35.0%
ATGCAGATGCAAAGACAATT+TGG + chr4_3:31118548-31118567 None:intergenic 35.0%
AACATCTCTTCCCTACAAAA+AGG + chr4_3:31118728-31118747 None:intergenic 35.0%
TTAACAGCAGTGTTGTCAAA+TGG - chr4_3:31118801-31118820 Msa0637850:intron 35.0%
CGGATGAAATTGAGGAATTT+CGG - chr4_3:31118928-31118947 Msa0637850:intron 35.0%
GGATGAAATTGAGGAATTTC+GGG - chr4_3:31118929-31118948 Msa0637850:intron 35.0%
! TAGATTGGCACTTTTACTGT+AGG + chr4_3:31119101-31119120 None:intergenic 35.0%
GTGCCAATCTAAACCATTTA+TGG - chr4_3:31119110-31119129 Msa0637850:intron 35.0%
AGCACATAGTTTAGCATCAA+AGG + chr4_3:31119565-31119584 None:intergenic 35.0%
CGCTCTATGTCAGATATATA+CGG + chr4_3:31119642-31119661 None:intergenic 35.0%
! GTCTTATTGTGAGAAATGAG+AGG - chr4_3:31119743-31119762 Msa0637850:intron 35.0%
CACTTAGCTTCCCTTTATAA+TGG + chr4_3:31119781-31119800 None:intergenic 35.0%
ATTAATCAAAGCGGGAGATT+TGG + chr4_3:31119953-31119972 None:intergenic 35.0%
! AGAAGTTGCAGAAGGTTTTT+GGG + chr4_3:31120162-31120181 None:intergenic 35.0%
! ACTTTTACCCCTTTTATCCT+TGG - chr4_3:31120308-31120327 Msa0637850:intron 35.0%
! CTTTTACCCCTTTTATCCTT+GGG - chr4_3:31120309-31120328 Msa0637850:intron 35.0%
ATACTCCTCTCACTTGATAT+TGG - chr4_3:31120602-31120621 Msa0637850:CDS 35.0%
TATGACCAATATCAAGTGAG+AGG + chr4_3:31120610-31120629 None:intergenic 35.0%
TCATTATATGCCATTGTCTC+TGG + chr4_3:31120842-31120861 None:intergenic 35.0%
AATGGCATATAATGATCCAG+TGG - chr4_3:31120847-31120866 Msa0637850:intron 35.0%
! ATTAATGCTTTCTTTGGAGG+AGG - chr4_3:31120938-31120957 Msa0637850:intron 35.0%
! TTAATGCTTTCTTTGGAGGA+GGG - chr4_3:31120939-31120958 Msa0637850:intron 35.0%
!! TACAGTTTCTGCATTGGTTA+GGG + chr4_3:31121035-31121054 None:intergenic 35.0%
!! ATACAGTTTCTGCATTGGTT+AGG + chr4_3:31121036-31121055 None:intergenic 35.0%
AACTTCATACTCATTGCTGT+TGG - chr4_3:31121222-31121241 Msa0637850:intron 35.0%
CTTTCCGACAATACAAACAA+AGG - chr4_3:31121260-31121279 Msa0637850:intron 35.0%
! AGCACCTTTGTTTGTATTGT+CGG + chr4_3:31121267-31121286 None:intergenic 35.0%
!! GGATTTTCAATATTTTGGGG+AGG - chr4_3:31121308-31121327 Msa0637850:intron 35.0%
CTGATAACTTCAAGGGAAAT+GGG + chr4_3:31121430-31121449 None:intergenic 35.0%
ACTGATAACTTCAAGGGAAA+TGG + chr4_3:31121431-31121450 None:intergenic 35.0%
CATCAAGACTGATAACTTCA+AGG + chr4_3:31121438-31121457 None:intergenic 35.0%
!! TTGATGATTTTAGGCTCTAC+CGG - chr4_3:31121452-31121471 Msa0637850:intron 35.0%
ATATGAATTGGCATCCTCTT+AGG + chr4_3:31121501-31121520 None:intergenic 35.0%
TAAGAGGATGCCAATTCATA+TGG - chr4_3:31121500-31121519 Msa0637850:intron 35.0%
AATTCATCTGCTTTCTCTGT+GGG + chr4_3:31121528-31121547 None:intergenic 35.0%
AAATTCATCTGCTTTCTCTG+TGG + chr4_3:31121529-31121548 None:intergenic 35.0%
GATTCACAATACCAGCTTTA+AGG + chr4_3:31121607-31121626 None:intergenic 35.0%
CAGAGACACAATAAGTTACT+TGG - chr4_3:31121635-31121654 Msa0637850:intron 35.0%
TAAGCAAACTAGAGCCATTT+AGG + chr4_3:31121679-31121698 None:intergenic 35.0%
! GAGGTATCCCACTAAAAAAT+GGG + chr4_3:31121806-31121825 None:intergenic 35.0%
CAATAATTATGGATGGATGG+AGG + chr4_3:31121825-31121844 None:intergenic 35.0%
TTCTATTTGTACCACGTGTA+AGG - chr4_3:31121993-31122012 Msa0637850:intron 35.0%
! ATCCATCCATTAATAACGGA+TGG - chr4_3:31122363-31122382 Msa0637850:CDS 35.0%
ATCCATCCGTTATTAATGGA+TGG + chr4_3:31122368-31122387 None:intergenic 35.0%
!! AGGGGATTGTAATGGATTAA+TGG - chr4_3:31122439-31122458 Msa0637850:intron 35.0%
TGGAAGAATATGGATTTGGA+TGG + chr4_3:31122486-31122505 None:intergenic 35.0%
GGCAAAATGGATGATTTAGA+TGG + chr4_3:31122518-31122537 None:intergenic 35.0%
GATATTGCTATATCAGGTCT+AGG - chr4_3:31122634-31122653 Msa0637850:intron 35.0%
AAAATGCAATAGACACTACG+GGG - chr4_3:31122704-31122723 Msa0637850:intron 35.0%
CGTAAAAATCTCAACAGGTT+TGG + chr4_3:31122755-31122774 None:intergenic 35.0%
! AACCTGTTGAGATTTTTACG+AGG - chr4_3:31122755-31122774 Msa0637850:CDS 35.0%
GTACGAGTATGCAGAATTAA+CGG - chr4_3:31122813-31122832 Msa0637850:CDS 35.0%
! AGAATTAACGGATAAAGAGC+AGG - chr4_3:31122825-31122844 Msa0637850:CDS 35.0%
TCCCCCCAAAAATAAGTAAA+AGG + chr4_3:31122899-31122918 None:intergenic 35.0%
!!! TTTTACTTATTTTTGGGGGG+AGG - chr4_3:31122898-31122917 Msa0637850:CDS 35.0%
!!! TTTACTTATTTTTGGGGGGA+GGG - chr4_3:31122899-31122918 Msa0637850:CDS 35.0%
! ACATTGGTTGTTGAGAACTT+GGG + chr4_3:31122967-31122986 None:intergenic 35.0%
! AACATTGGTTGTTGAGAACT+TGG + chr4_3:31122968-31122987 None:intergenic 35.0%
TAATGTGACTAATACAACCG+TGG - chr4_3:31122999-31123018 Msa0637850:CDS 35.0%
! TTTTGAACAAACTGATGCCA+CGG + chr4_3:31123019-31123038 None:intergenic 35.0%
! CATCAGTTTGTTCAAAAGGA+AGG - chr4_3:31123022-31123041 Msa0637850:CDS 35.0%
! GAGGTGTTAAGAAAGTGGAT+AGG + chr4_3:31115129-31115148 None:intergenic 40.0%
!! TTTGAGGGAATTTGGGGTTT+TGG + chr4_3:31115159-31115178 None:intergenic 40.0%
GGAGTGAATTTGAGGGAATT+TGG + chr4_3:31115167-31115186 None:intergenic 40.0%
! CAAGGTTTGGAGTGAATTTG+AGG + chr4_3:31115175-31115194 None:intergenic 40.0%
AATTCGCAGAGAATGAGACA+AGG + chr4_3:31115193-31115212 None:intergenic 40.0%
GTTCTGTTTGAGGATGAGTT+TGG + chr4_3:31115314-31115333 None:intergenic 40.0%
!! AAATCCAGGAGCGTCATTAT+CGG + chr4_3:31115422-31115441 None:intergenic 40.0%
CAATCTATGAAGCACAGACA+CGG + chr4_3:31115555-31115574 None:intergenic 40.0%
! TAAAAGTGTGGGTCCTAGAT+AGG + chr4_3:31115585-31115604 None:intergenic 40.0%
!! TCTAGGACCCACACTTTTAA+TGG - chr4_3:31115586-31115605 Msa0637850:intron 40.0%
TTTCACCATGAGACAAAAGC+TGG + chr4_3:31115842-31115861 None:intergenic 40.0%
GGTGAAATGATAACTGCTGT+TGG - chr4_3:31115855-31115874 Msa0637850:intron 40.0%
GAAATGATAACTGCTGTTGG+AGG - chr4_3:31115858-31115877 Msa0637850:intron 40.0%
! TACATGTTTTTCCGAACCAG+TGG - chr4_3:31116512-31116531 Msa0637850:intron 40.0%
! TTTTTGTGACACACTACCAC+TGG + chr4_3:31116531-31116550 None:intergenic 40.0%
GACGCACATTTCATACTTTC+AGG + chr4_3:31116711-31116730 None:intergenic 40.0%
ATACCTTCCTGATCCGATTT+AGG - chr4_3:31116780-31116799 Msa0637850:intron 40.0%
TACCTTCCTGATCCGATTTA+GGG - chr4_3:31116781-31116800 Msa0637850:intron 40.0%
AGATTCGTATCGAGGAAGTA+AGG + chr4_3:31116848-31116867 None:intergenic 40.0%
TACTTCCTCGATACGAATCT+AGG - chr4_3:31116848-31116867 Msa0637850:CDS 40.0%
AAATGCCTAGATTCGTATCG+AGG + chr4_3:31116856-31116875 None:intergenic 40.0%
ATGCTCGCTGATATTTGGTA+TGG - chr4_3:31116879-31116898 Msa0637850:CDS 40.0%
!! TGATCGGTGGTTGATAAAAC+TGG - chr4_3:31117182-31117201 Msa0637850:intron 40.0%
CACCAGATAACTGAACAACA+TGG + chr4_3:31117854-31117873 None:intergenic 40.0%
GGAAAAAAGGTGACCCTTAA+AGG + chr4_3:31118162-31118181 None:intergenic 40.0%
!!! AGCCTTTTGAGATACTCAGT+AGG - chr4_3:31118424-31118443 Msa0637850:intron 40.0%
! ACCATGATGATTTAGGGCTA+AGG - chr4_3:31118605-31118624 Msa0637850:intron 40.0%
TCCTTAGCCCTAAATCATCA+TGG + chr4_3:31118609-31118628 None:intergenic 40.0%
GGGAAGAGATGTTTACATTC+TGG - chr4_3:31118735-31118754 Msa0637850:intron 40.0%
ATTCTGGTAAGTCTCTGAAC+TGG - chr4_3:31118751-31118770 Msa0637850:intron 40.0%
GGAAGATTCATATGCTAAGC+AGG - chr4_3:31118772-31118791 Msa0637850:intron 40.0%
GTGTTATCTATGACGGTTTG+TGG + chr4_3:31118961-31118980 None:intergenic 40.0%
TTACAGGGTTCAGCTAATGT+TGG - chr4_3:31119341-31119360 Msa0637850:intron 40.0%
CGTACAATACACCAATTGGT+GGG + chr4_3:31119842-31119861 None:intergenic 40.0%
TCGTACAATACACCAATTGG+TGG + chr4_3:31119843-31119862 None:intergenic 40.0%
GCATCGTACAATACACCAAT+TGG + chr4_3:31119846-31119865 None:intergenic 40.0%
CTTGTCTAAAAAACCGGGTA+AGG + chr4_3:31119868-31119887 None:intergenic 40.0%
!!! TACCCGGTTTTTTAGACAAG+AGG - chr4_3:31119868-31119887 Msa0637850:intron 40.0%
AGCCTCTTGTCTAAAAAACC+GGG + chr4_3:31119873-31119892 None:intergenic 40.0%
CAGCCTCTTGTCTAAAAAAC+CGG + chr4_3:31119874-31119893 None:intergenic 40.0%
AGTTGTTGCATGTGACTGAA+AGG + chr4_3:31119919-31119938 None:intergenic 40.0%
! AACAATGAAGCTTTGTGTGC+AGG + chr4_3:31120086-31120105 None:intergenic 40.0%
! GAGAAGTTGCAGAAGGTTTT+TGG + chr4_3:31120163-31120182 None:intergenic 40.0%
AAACAAGGAGAAGTTGCAGA+AGG + chr4_3:31120170-31120189 None:intergenic 40.0%
ATTGTGGCCCAAGGATAAAA+GGG + chr4_3:31120319-31120338 None:intergenic 40.0%
AATTGTGGCCCAAGGATAAA+AGG + chr4_3:31120320-31120339 None:intergenic 40.0%
! ATTTTTGCAATTGTGGCCCA+AGG + chr4_3:31120328-31120347 None:intergenic 40.0%
AATTGGACGATTCATGGAGA+GGG - chr4_3:31120445-31120464 Msa0637850:CDS 40.0%
CATGTGTTCTCTTTGTAGAC+AGG + chr4_3:31120497-31120516 None:intergenic 40.0%
!! CAAGTGAGAGGAGTATCTTA+TGG + chr4_3:31120598-31120617 None:intergenic 40.0%
! TAATGCTTTCTTTGGAGGAG+GGG - chr4_3:31120940-31120959 Msa0637850:intron 40.0%
GTGTCATACAGTTTCTGCAT+TGG + chr4_3:31121041-31121060 None:intergenic 40.0%
AAGAACATACCGGGAAAGAT+AGG + chr4_3:31121151-31121170 None:intergenic 40.0%
!! AAAGGTGCTTCGACAGTAAA+TGG - chr4_3:31121278-31121297 Msa0637850:intron 40.0%
! TAACATTTTACGGGCCTAAG+AGG - chr4_3:31121484-31121503 Msa0637850:intron 40.0%
!!! CTTGCTGTTTTCCTTAAAGC+TGG - chr4_3:31121593-31121612 Msa0637850:intron 40.0%
!!! CTTGGTGTTTTGCTTAAAGC+TGG - chr4_3:31121653-31121672 Msa0637850:intron 40.0%
! TTGCTTAAAGCTGGCCTAAA+TGG - chr4_3:31121662-31121681 Msa0637850:intron 40.0%
CATAACAATGGACCCTGAAT+TGG + chr4_3:31121735-31121754 None:intergenic 40.0%
CAATTCAGGGTCCATTGTTA+TGG - chr4_3:31121733-31121752 Msa0637850:intron 40.0%
!! GGAGGTATCCCACTAAAAAA+TGG + chr4_3:31121807-31121826 None:intergenic 40.0%
CAAGGAAATATCCTTACACG+TGG + chr4_3:31122007-31122026 None:intergenic 40.0%
TCCTTGTGAAACCTGAATGA+CGG - chr4_3:31122021-31122040 Msa0637850:intron 40.0%
ATAAACAGAAGCCGTCATTC+AGG + chr4_3:31122035-31122054 None:intergenic 40.0%
AATGACTTGAGAATTAGGGG+TGG + chr4_3:31122539-31122558 None:intergenic 40.0%
!!! CTGTTGCTTTCTTTTTGTGC+AGG - chr4_3:31122602-31122621 Msa0637850:intron 40.0%
GATATAGCAATATCGCAAGC+TGG + chr4_3:31122628-31122647 None:intergenic 40.0%
GCTTGCGATATTGCTATATC+AGG - chr4_3:31122628-31122647 Msa0637850:intron 40.0%
TTGCTATATCAGGTCTAGGA+TGG - chr4_3:31122638-31122657 Msa0637850:intron 40.0%
AAATGCAATAGACACTACGG+GGG - chr4_3:31122705-31122724 Msa0637850:intron 40.0%
AGCAGGAAATGAGACCAAAA+TGG - chr4_3:31122842-31122861 Msa0637850:CDS 40.0%
! GTGGCATCAGTTTGTTCAAA+AGG - chr4_3:31123018-31123037 Msa0637850:CDS 40.0%
!!! TTGGGGTTTTGGAGAGAAAG+AGG + chr4_3:31115148-31115167 None:intergenic 45.0%
GCAGAGAATGAGACAAGGTT+TGG + chr4_3:31115188-31115207 None:intergenic 45.0%
TCTGGTAAGCGAGATTTGGA+AGG + chr4_3:31115223-31115242 None:intergenic 45.0%
TGGTTGCTTCAAATGACTGC+TGG + chr4_3:31115294-31115313 None:intergenic 45.0%
ATAGCAAGAAGCGACAGCAA+TGG + chr4_3:31115374-31115393 None:intergenic 45.0%
! ATTGCTGTCGCTTCTTGCTA+TGG - chr4_3:31115373-31115392 Msa0637850:CDS 45.0%
CCAATTCATAGGTTTCGGAG+AGG + chr4_3:31115447-31115466 None:intergenic 45.0%
CCTCTCCGAAACCTATGAAT+TGG - chr4_3:31115444-31115463 Msa0637850:CDS 45.0%
TATGAAGCACGGACACAAAC+AGG + chr4_3:31115690-31115709 None:intergenic 45.0%
ATAACTGCTGTTGGAGGACA+TGG - chr4_3:31115864-31115883 Msa0637850:intron 45.0%
AACCCTAAATCGGATCAGGA+AGG + chr4_3:31116786-31116805 None:intergenic 45.0%
CTCTAACCCTAAATCGGATC+AGG + chr4_3:31116790-31116809 None:intergenic 45.0%
TTCAGCAATTGGATGATCGG+TGG - chr4_3:31117169-31117188 Msa0637850:intron 45.0%
CTTTGCATCTGCATTCTGCA+CGG - chr4_3:31118554-31118573 Msa0637850:intron 45.0%
TTTGCATCTGCATTCTGCAC+GGG - chr4_3:31118555-31118574 Msa0637850:intron 45.0%
ACAGCAGTGTTGTCAAATGG+CGG - chr4_3:31118804-31118823 Msa0637850:intron 45.0%
GTGTTGTCAAATGGCGGTTA+TGG - chr4_3:31118810-31118829 Msa0637850:intron 45.0%
!! AGGTTTTGACCTCGTCGATA+TGG - chr4_3:31118845-31118864 Msa0637850:intron 45.0%
TATGGCAAATGGCAGCTGAT+AGG - chr4_3:31118863-31118882 Msa0637850:intron 45.0%
ATGGCAAATGGCAGCTGATA+GGG - chr4_3:31118864-31118883 Msa0637850:intron 45.0%
! ACTATTATGGCGGGGTATGA+CGG + chr4_3:31118899-31118918 None:intergenic 45.0%
CTTATGGCACTATTATGGCG+GGG + chr4_3:31118907-31118926 None:intergenic 45.0%
CCTTATGGCACTATTATGGC+GGG + chr4_3:31118908-31118927 None:intergenic 45.0%
GCCTTATGGCACTATTATGG+CGG + chr4_3:31118909-31118928 None:intergenic 45.0%
GCCATAATAGTGCCATAAGG+CGG - chr4_3:31118908-31118927 Msa0637850:intron 45.0%
TCCGCCTTATGGCACTATTA+TGG + chr4_3:31118912-31118931 None:intergenic 45.0%
CCTCAATTTCATCCGCCTTA+TGG + chr4_3:31118923-31118942 None:intergenic 45.0%
CCATAAGGCGGATGAAATTG+AGG - chr4_3:31118920-31118939 Msa0637850:intron 45.0%
GACACTCCACTCACTTGATA+TGG + chr4_3:31119726-31119745 None:intergenic 45.0%
GTATTGTACGATGCCTTACC+CGG - chr4_3:31119852-31119871 Msa0637850:intron 45.0%
! TTAGACAAGAGGCTGTTTCC+AGG - chr4_3:31119879-31119898 Msa0637850:intron 45.0%
CTTTGTGTGCAGGATAGAAG+AGG + chr4_3:31120076-31120095 None:intergenic 45.0%
!! GTTGCAGAAGGTTTTTGGGA+GGG + chr4_3:31120158-31120177 None:intergenic 45.0%
!! AGTTGCAGAAGGTTTTTGGG+AGG + chr4_3:31120159-31120178 None:intergenic 45.0%
TTGTGGCCCAAGGATAAAAG+GGG + chr4_3:31120318-31120337 None:intergenic 45.0%
AACGGGAGCAATCTGAAAAC+AGG - chr4_3:31120416-31120435 Msa0637850:CDS 45.0%
CTGAAAACAGGTGGCAGAAT+TGG - chr4_3:31120428-31120447 Msa0637850:CDS 45.0%
TGGCAGAATTGGACGATTCA+TGG - chr4_3:31120439-31120458 Msa0637850:CDS 45.0%
GAATTGGACGATTCATGGAG+AGG - chr4_3:31120444-31120463 Msa0637850:CDS 45.0%
ATTGGACGATTCATGGAGAG+GGG - chr4_3:31120446-31120465 Msa0637850:CDS 45.0%
CTGTTCCTGGAACTACCTTA+GGG - chr4_3:31120906-31120925 Msa0637850:intron 45.0%
CAGAAACTGTATGACACTCC+AGG - chr4_3:31121044-31121063 Msa0637850:intron 45.0%
TCGACAGTAAATGGCCTGAA+TGG - chr4_3:31121287-31121306 Msa0637850:intron 45.0%
TCTGTGGGCACCATATGAAT+TGG + chr4_3:31121513-31121532 None:intergenic 45.0%
! CCTTCTCTTTTCCACTTGGT+GGG + chr4_3:31122089-31122108 None:intergenic 45.0%
! TCAGCCTTCTCTTTTCCACT+TGG + chr4_3:31122093-31122112 None:intergenic 45.0%
GAAAAGAGAAGGCTGAGAAC+TGG - chr4_3:31122097-31122116 Msa0637850:intron 45.0%
GAGAATTAGGGGTGGCAAAA+TGG + chr4_3:31122531-31122550 None:intergenic 45.0%
AATCTGTGTGACCTACCAAC+CGG + chr4_3:31122676-31122695 None:intergenic 45.0%
AACAGGTTTGGGGACATGTA+CGG + chr4_3:31122743-31122762 None:intergenic 45.0%
GGCCTCGTAAAAATCTCAAC+AGG + chr4_3:31122760-31122779 None:intergenic 45.0%
GTTGTTGAGAACTTGGGTAG+AGG + chr4_3:31122961-31122980 None:intergenic 45.0%
AAATTTCACCCTTGCTACCG+AGG - chr4_3:31123102-31123121 Msa0637850:five_prime_UTR 45.0%
GTGTTAATCCTCGGTAGCAA+GGG + chr4_3:31123113-31123132 None:intergenic 45.0%
AGTGTTAATCCTCGGTAGCA+AGG + chr4_3:31123114-31123133 None:intergenic 45.0%
!!! ATATTTTTTATGTAATATTT+AGG - chr4_3:31116970-31116989 Msa0637850:intron 5.0%
!!! AATTATTTTAAAGAAATTTA+GGG - chr4_3:31122420-31122439 Msa0637850:intron 5.0%
GGCTTCTGGTAAGCGAGATT+TGG + chr4_3:31115227-31115246 None:intergenic 50.0%
ACTTCCGATAATGACGCTCC+TGG - chr4_3:31115415-31115434 Msa0637850:CDS 50.0%
GTTTCGGAGAGGACAAATCC+AGG + chr4_3:31115436-31115455 None:intergenic 50.0%
! GTGACACACTACCACTGGTT+CGG + chr4_3:31116526-31116545 None:intergenic 50.0%
ACCAGCAAGATCTCTCACTC+GGG + chr4_3:31117575-31117594 None:intergenic 50.0%
CACCAGCAAGATCTCTCACT+CGG + chr4_3:31117576-31117595 None:intergenic 50.0%
! TGTTGGGGATTGGGTTGTAG+AGG - chr4_3:31117748-31117767 Msa0637850:intron 50.0%
GACCTCGTCGATATGGCAAA+TGG - chr4_3:31118852-31118871 Msa0637850:intron 50.0%
! TGCCATTTGCCATATCGACG+AGG + chr4_3:31118857-31118876 None:intergenic 50.0%
CCCGCCATAATAGTGCCATA+AGG - chr4_3:31118905-31118924 Msa0637850:intron 50.0%
TCTATGACGGTTTGTGGCAG+AGG + chr4_3:31118955-31118974 None:intergenic 50.0%
TCAGCGCCATATCAAGTGAG+TGG - chr4_3:31119717-31119736 Msa0637850:intron 50.0%
ACTAAAGCTCCCGCATACGT+AGG - chr4_3:31119802-31119821 Msa0637850:intron 50.0%
CTAAAGCTCCCGCATACGTA+GGG - chr4_3:31119803-31119822 Msa0637850:intron 50.0%
AAGGTCACAGGTTCATGTCC+TGG + chr4_3:31119900-31119919 None:intergenic 50.0%
GCATGTGACTGAAAGGTCAC+AGG + chr4_3:31119912-31119931 None:intergenic 50.0%
TAGGGCAGAACTGCAAGGAA+GGG + chr4_3:31120033-31120052 None:intergenic 50.0%
ATAGGGCAGAACTGCAAGGA+AGG + chr4_3:31120034-31120053 None:intergenic 50.0%
TGTGTGCAGGATAGAAGAGG+TGG + chr4_3:31120073-31120092 None:intergenic 50.0%
GGGAGCAATCTGAAAACAGG+TGG - chr4_3:31120419-31120438 Msa0637850:CDS 50.0%
CATGGAGAGGGGAGAACAAT+AGG - chr4_3:31120457-31120476 Msa0637850:CDS 50.0%
GCTGTTCCTGGAACTACCTT+AGG - chr4_3:31120905-31120924 Msa0637850:intron 50.0%
ATTGGCCCTAAGGTAGTTCC+AGG + chr4_3:31120914-31120933 None:intergenic 50.0%
GAACAACTGCAGTTTGCCTG+TGG + chr4_3:31121082-31121101 None:intergenic 50.0%
AGCAAGGGCGGATAGATCTT+CGG + chr4_3:31121108-31121127 None:intergenic 50.0%
!! CAGTCGGCTTTTAGGAGCAA+GGG + chr4_3:31121123-31121142 None:intergenic 50.0%
!! TCAGTCGGCTTTTAGGAGCA+AGG + chr4_3:31121124-31121143 None:intergenic 50.0%
TTGCTCCTAAAAGCCGACTG+AGG - chr4_3:31121123-31121142 Msa0637850:intron 50.0%
TGCTCCTAAAAGCCGACTGA+GGG - chr4_3:31121124-31121143 Msa0637850:intron 50.0%
! GCCGTCATTCAGGTTTCACA+AGG + chr4_3:31122025-31122044 None:intergenic 50.0%
GTTCTGCTAATCCCACCAAG+TGG - chr4_3:31122075-31122094 Msa0637850:intron 50.0%
CCCACCAAGTGGAAAAGAGA+AGG - chr4_3:31122086-31122105 Msa0637850:intron 50.0%
! GCCTTCTCTTTTCCACTTGG+TGG + chr4_3:31122090-31122109 None:intergenic 50.0%
AGGATGGCTTTCTGTTGAGC+CGG - chr4_3:31122654-31122673 Msa0637850:intron 50.0%
TTTCTGTTGAGCCGGTTGGT+AGG - chr4_3:31122662-31122681 Msa0637850:intron 50.0%
CATTACCAGTAGGCAAGGCT+GGG - chr4_3:31122782-31122801 Msa0637850:CDS 50.0%
ATTACCAGTAGGCAAGGCTG+GGG - chr4_3:31122783-31122802 Msa0637850:CDS 50.0%
!! ATTTTTGGGGGGAGGGTACA+TGG - chr4_3:31122906-31122925 Msa0637850:CDS 50.0%
TCTCGCTTACCAGAAGCCAC+TGG - chr4_3:31115229-31115248 Msa0637850:three_prime_UTR 55.0%
AGGAACTTCTCGCCTGGTGA+CGG + chr4_3:31115265-31115284 None:intergenic 55.0%
CAAATGACTGCTGGCGTTCG+AGG + chr4_3:31115285-31115304 None:intergenic 55.0%
! GTCGCTTCTTGCTATGGCTG+TGG - chr4_3:31115379-31115398 Msa0637850:CDS 55.0%
!! CGGTGCCAGCTTTTGTCTCA+TGG - chr4_3:31115834-31115853 Msa0637850:intron 55.0%
ACTGCTGTTGGAGGACATGG+AGG - chr4_3:31115867-31115886 Msa0637850:intron 55.0%
GGAGGACATGGAGGATACTC+TGG - chr4_3:31115876-31115895 Msa0637850:intron 55.0%
GGACATGGAGGATACTCTGG+CGG - chr4_3:31115879-31115898 Msa0637850:intron 55.0%
ACACTGGGGTTTAGCGCAAG+TGG - chr4_3:31116230-31116249 Msa0637850:intron 55.0%
TGGGGTTTAGCGCAAGTGGT+TGG - chr4_3:31116234-31116253 Msa0637850:intron 55.0%
GGGGTTTAGCGCAAGTGGTT+GGG - chr4_3:31116235-31116254 Msa0637850:intron 55.0%
GGGTTTAGCGCAAGTGGTTG+GGG - chr4_3:31116236-31116255 Msa0637850:intron 55.0%
TCCCGAGTGAGAGATCTTGC+TGG - chr4_3:31117571-31117590 Msa0637850:intron 55.0%
GACGAGGTCAAAACCTGCCA+TGG + chr4_3:31118841-31118860 None:intergenic 55.0%
GCAAATGGCAGCTGATAGGG+CGG - chr4_3:31118867-31118886 Msa0637850:intron 55.0%
CAAATGGCAGCTGATAGGGC+GGG - chr4_3:31118868-31118887 Msa0637850:intron 55.0%
TTACCGGACCCTACGTATGC+GGG + chr4_3:31119814-31119833 None:intergenic 55.0%
CTTACCGGACCCTACGTATG+CGG + chr4_3:31119815-31119834 None:intergenic 55.0%
GCATACGTAGGGTCCGGTAA+GGG - chr4_3:31119814-31119833 Msa0637850:intron 55.0%
CATACGTAGGGTCCGGTAAG+GGG - chr4_3:31119815-31119834 Msa0637850:intron 55.0%
CAATTGGTGGGACCCCTTAC+CGG + chr4_3:31119830-31119849 None:intergenic 55.0%
CGAGATAGGGCAGAACTGCA+AGG + chr4_3:31120038-31120057 None:intergenic 55.0%
CCAGGAACAGCAGACTGTAC+TGG + chr4_3:31120896-31120915 None:intergenic 55.0%
CCAGTACAGTCTGCTGTTCC+TGG - chr4_3:31120893-31120912 Msa0637850:intron 55.0%
! CTGTGGTGGAGATGAACTCC+TGG + chr4_3:31121065-31121084 None:intergenic 55.0%
CAGGAGTTCATCTCCACCAC+AGG - chr4_3:31121063-31121082 Msa0637850:intron 55.0%
CAACTGCAGTTTGCCTGTGG+TGG + chr4_3:31121079-31121098 None:intergenic 55.0%
AGGGCGGATAGATCTTCGGA+AGG + chr4_3:31121104-31121123 None:intergenic 55.0%
!! TCGGCTTTTAGGAGCAAGGG+CGG + chr4_3:31121120-31121139 None:intergenic 55.0%
GCTCCTAAAAGCCGACTGAG+GGG - chr4_3:31121125-31121144 Msa0637850:intron 55.0%
GGAAAGATAGGCCCCTCAGT+CGG + chr4_3:31121139-31121158 None:intergenic 55.0%
ACTGAGGGGCCTATCTTTCC+CGG - chr4_3:31121139-31121158 Msa0637850:intron 55.0%
GAGAAGGCTGAGAACTGGAG+AGG - chr4_3:31122102-31122121 Msa0637850:intron 55.0%
TGGCTTTCTGTTGAGCCGGT+TGG - chr4_3:31122658-31122677 Msa0637850:intron 55.0%
ACGAGGCCACCATTACCAGT+AGG - chr4_3:31122772-31122791 Msa0637850:CDS 55.0%
GCCACCATTACCAGTAGGCA+AGG - chr4_3:31122777-31122796 Msa0637850:CDS 55.0%
!! GCCTTGCCTACTGGTAATGG+TGG + chr4_3:31122781-31122800 None:intergenic 55.0%
CCAGCCTTGCCTACTGGTAA+TGG + chr4_3:31122784-31122803 None:intergenic 55.0%
CCATTACCAGTAGGCAAGGC+TGG - chr4_3:31122781-31122800 Msa0637850:CDS 55.0%
CGTTCGAGGAACTTCTCGCC+TGG + chr4_3:31115271-31115290 None:intergenic 60.0%
TGGCGGTTATGGCAGAGCCA+TGG - chr4_3:31118821-31118840 Msa0637850:CDS 60.0%
GGTTATGGCAGAGCCATGGC+AGG - chr4_3:31118825-31118844 Msa0637850:CDS 60.0%
CGCATACGTAGGGTCCGGTA+AGG - chr4_3:31119813-31119832 Msa0637850:intron 60.0%
CGGTAAGGGGTCCCACCAAT+TGG - chr4_3:31119828-31119847 Msa0637850:intron 60.0%
CTTTGTGCAGCTGCAGCCAC+TGG + chr4_3:31120866-31120885 None:intergenic 60.0%
!! AGGCCCCTCAGTCGGCTTTT+AGG + chr4_3:31121131-31121150 None:intergenic 60.0%
GCTCCCGCATACGTAGGGTC+CGG - chr4_3:31119808-31119827 Msa0637850:intron 65.0%
TCTGCCCCAGCCTTGCCTAC+TGG + chr4_3:31122790-31122809 None:intergenic 65.0%
TAGGCAAGGCTGGGGCAGAG+TGG - chr4_3:31122791-31122810 Msa0637850:CDS 65.0%
GCAGCGGCTCCAGTGGCTTC+TGG + chr4_3:31115241-31115260 None:intergenic 70.0%
TGACGGAGCAGCGGCTCCAG+TGG + chr4_3:31115248-31115267 None:intergenic 70.0%
!! CTCGCCTGGTGACGGAGCAG+CGG + chr4_3:31115257-31115276 None:intergenic 70.0%
GGAGCCGCTGCTCCGTCACC+AGG - chr4_3:31115250-31115269 Msa0637850:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 31115062 31123141 31115062 ID=Msa0637850;Name=Msa0637850
chr4_3 mRNA 31115062 31123141 31115062 ID=Msa0637850-mRNA-1;Parent=Msa0637850;Name=Msa0637850-mRNA-1;_AED=0.06;_eAED=0.06;_QI=50|1|1|1|0.91|1|13|268|548
chr4_3 exon 31115062 31115579 31115062 ID=Msa0637850-mRNA-1:exon:7310;Parent=Msa0637850-mRNA-1
chr4_3 exon 31116031 31116140 31116031 ID=Msa0637850-mRNA-1:exon:7309;Parent=Msa0637850-mRNA-1
chr4_3 exon 31116649 31116738 31116649 ID=Msa0637850-mRNA-1:exon:7308;Parent=Msa0637850-mRNA-1
chr4_3 exon 31116848 31116955 31116848 ID=Msa0637850-mRNA-1:exon:7307;Parent=Msa0637850-mRNA-1
chr4_3 exon 31117043 31117156 31117043 ID=Msa0637850-mRNA-1:exon:7306;Parent=Msa0637850-mRNA-1
chr4_3 exon 31117242 31117360 31117242 ID=Msa0637850-mRNA-1:exon:7305;Parent=Msa0637850-mRNA-1
chr4_3 exon 31118811 31118856 31118811 ID=Msa0637850-mRNA-1:exon:7304;Parent=Msa0637850-mRNA-1
chr4_3 exon 31119447 31119467 31119447 ID=Msa0637850-mRNA-1:exon:7303;Parent=Msa0637850-mRNA-1
chr4_3 exon 31120055 31120136 31120055 ID=Msa0637850-mRNA-1:exon:7302;Parent=Msa0637850-mRNA-1
chr4_3 exon 31120411 31120490 31120411 ID=Msa0637850-mRNA-1:exon:7301;Parent=Msa0637850-mRNA-1
chr4_3 exon 31120579 31120665 31120579 ID=Msa0637850-mRNA-1:exon:7300;Parent=Msa0637850-mRNA-1
chr4_3 exon 31122223 31122408 31122223 ID=Msa0637850-mRNA-1:exon:7299;Parent=Msa0637850-mRNA-1
chr4_3 exon 31122738 31123141 31122738 ID=Msa0637850-mRNA-1:exon:7298;Parent=Msa0637850-mRNA-1
chr4_3 five_prime_UTR 31123092 31123141 31123092 ID=Msa0637850-mRNA-1:five_prime_utr;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31122738 31123091 31122738 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31122223 31122408 31122223 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31120579 31120665 31120579 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31120411 31120490 31120411 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31120055 31120136 31120055 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31119447 31119467 31119447 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31118811 31118856 31118811 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31117242 31117360 31117242 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31117043 31117156 31117043 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31116848 31116955 31116848 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31116649 31116738 31116649 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31116031 31116140 31116031 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 CDS 31115330 31115579 31115330 ID=Msa0637850-mRNA-1:cds;Parent=Msa0637850-mRNA-1
chr4_3 three_prime_UTR 31115062 31115329 31115062 ID=Msa0637850-mRNA-1:three_prime_utr;Parent=Msa0637850-mRNA-1
Gene Sequence

>Msa0637850

ATGGCGCTTAAAACCCTATCCACTTTCTTAACACCTCTTTCTCTCCAAAACCCCAAATTCCCTCAAATTCACTCCAAACCTTGTCTCATTCTCTGCGAATTATCTCGTCCTTCCAAATCTCGCTTACCAGAAGCCACTGGAGCCGCTGCTCCGTCACCAGGCGAGAAGTTCCTCGAACGCCAGCAGTCATTTGAAGCAACCAAACTCATCCTCAAACAGAACAACAACAGTAAAAAGAAAGAGAAGCCTCTTAAATCTTCCATTGCTGTCGCTTCTTGCTATGGCTGTGGCGCTCCTTTACAAACTTCCGATAATGACGCTCCTGGATTTGTCCTCTCCGAAACCTATGAATTGAAGAAGAAACATCACCAGCTTAAAACTGTTCTATGTGGGCGGTGCCAGCTTTTGTCTCATGGTGAAATGATAACTGCTGTTGGAGGACATGGAGGATACTCTGGCGGAAAACAGTTCATTACTGCCGAAGATCTTCGACAAAAATTGTCTCATTTGCGTGATGCCAAAGCTCTAATTGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCCCGAGTGAGAGATCTTGCTGGTGCTAATCCAATAATAATGGTTGTGACTAAGGTTGATCTCCTTCCAAGAGATACTGATCTTAATTGTGTTGGGGATTGGGTTGTAGAGGCTATCACAAGAAAGAAACTAAATGTTCTCAGTGTCCATCTCACAAGTTCAAAATCATTGGTAGGAATAACTGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGGAAGAGATGTTTACATTCTGGGTTCAGCTAATGTTGGTAAATCTGCTTTCATTAACGCCTTATTAAAGACAATGGCATATAATGATCCAGTGGCTGCAGCTGCACAAAGATACAAACCAGTACAGTCTGCTGTTCCTGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTCTTTGGAGGAGGGAAACTGTATGACACTCCAGGAGTTCATCTCCACCACAGGCAAACTGCAGTTGTTCCTTCCGAAGATCTATCCGCCCTTGCTCCTAAAAGCCGACTGAGGGGCCTATCTTTCCCGAGTTCACAAGTACTTTCCGACAATACAAACAAAGGTGCTTCGACAGTAAATGGCCTGAATGGATTTTCAATATTTTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGCTCTACCGGAAACATGTTTAACATTTTACGGGCCTAAGAGGATGCCAATTCATATGGTGCCCACAGAGAAAGCAGATGAATTTTATCAGAAAGAACTTGGAGTTCTGCTAATCCCACCAAGTGGAAAAGAGAAGGCTGAGAACTGGAGAGGACTTGACTCAGAACGTAAATTGCAAATAAAATTTGAAGATACTGAAAGGCCAGCTTGCGATATTGCTATATCAGGTCTAGGATGGCTTTCTGTTGAGCCGGTTGGTAGGTCACACAGATTCTCACAAAAAAATGCAATAGACACTACGGGGGAATTGCTTTTAGCCGTACATGTCCCCAAACCTGTTGAGATTTTTACGAGGCCACCATTACCAGTAGGCAAGGCTGGGGCAGAGTGGTACGAGTATGCAGAATTAACGGATAAAGAGCAGGAAATGAGACCAAAATGGTACTTTTGA

Protein sequence

>Msa0637850

MALKTLSTFLTPLSLQNPKFPQIHSKPCLILCELSRPSKSRLPEATGAAAPSPGEKFLERQQSFEATKLILKQNNNSKKKEKPLKSSIAVASCYGCGAPLQTSDNDAPGFVLSETYELKKKHHQLKTVLCGRCQLLSHGEMITAVGGHGGYSGGKQFITAEDLRQKLSHLRDAKALIVKLVDIVDFNGSFLSRVRDLAGANPIIMVVTKVDLLPRDTDLNCVGDWVVEAITRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAYNDPVAAAAQRYKPVQSAVPGTTLGPIQINAFFGGGKLYDTPGVHLHHRQTAVVPSEDLSALAPKSRLRGLSFPSSQVLSDNTNKGASTVNGLNGFSIFWGGLVRIDVLKALPETCLTFYGPKRMPIHMVPTEKADEFYQKELGVLLIPPSGKEKAENWRGLDSERKLQIKFEDTERPACDIAISGLGWLSVEPVGRSHRFSQKNAIDTTGELLLAVHVPKPVEIFTRPPLPVGKAGAEWYEYAELTDKEQEMRPKWYF*