AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0308430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308430 MtrunA17_Chr2g0293821 95.823 407 15 2 1 406 1 406 0.0 790
Msa0308430 MtrunA17_Chr1g0201261 30.244 205 134 4 159 357 275 476 1.81e-23 102
Msa0308430 MtrunA17_Chr3g0122171 27.368 190 120 3 161 332 94 283 1.64e-17 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308430 AT5G30510.1 70.218 413 113 2 3 405 1 413 0.0 598
Msa0308430 AT1G71720.1 33.171 205 128 4 159 357 261 462 1.91e-24 105
Msa0308430 AT3G23700.1 31.667 180 105 4 171 332 97 276 4.81e-22 97.4
Msa0308430 AT1G71720.2 32.500 160 100 3 159 312 261 418 2.98e-17 83.6
Msa0308430 AT5G14580.1 39.806 103 51 3 231 332 660 752 1.31e-11 67.0
Msa0308430 AT3G11964.1 28.758 153 100 4 254 402 1431 1578 5.25e-11 65.5
Msa0308430 AT3G11964.2 28.758 153 100 4 254 402 1455 1602 5.90e-11 65.1

Find 134 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGCTCTTTCTTTGTTAT+TGG 0.111293 2_4:-2656009 None:intergenic
CAGGGCGTCTTTGTTGTTTA+TGG 0.142595 2_4:-2655956 None:intergenic
ATGAGAATGCCTCTATTTAT+AGG 0.203153 2_4:+2659783 Msa0308430:three_prime_UTR
CTTGAGTTTAAGAGATATTC+AGG 0.242101 2_4:+2657593 Msa0308430:CDS
CTGGTTTGGTTTCAGGTTAA+GGG 0.265794 2_4:+2657387 Msa0308430:intron
AGGGCGTCTTTGTTGTTTAT+GGG 0.287159 2_4:-2655955 None:intergenic
CAGGTTAAGGGCACTGTGTT+TGG 0.314966 2_4:+2657399 Msa0308430:intron
CGAATACAAGCGTTGGATTA+CGG 0.315930 2_4:-2658796 None:intergenic
AACAACTGACAAGCACAAAA+TGG 0.319912 2_4:+2655898 Msa0308430:CDS
CTCAATCATTATCCTTCAGC+TGG 0.327818 2_4:-2659493 None:intergenic
CAAAGGCGCCATATGGCTTT+AGG 0.331805 2_4:-2658505 None:intergenic
AACAAGTTCCTCAAATATAC+AGG 0.341352 2_4:-2659667 None:intergenic
TTTCAAGAGCTTCTGTAAAC+TGG 0.350843 2_4:-2656106 None:intergenic
GGATAAGTCTGGCTTGTTCC+TGG 0.356772 2_4:-2658406 None:intergenic
AAAGAGGAATTTGTAATTGT+TGG 0.366149 2_4:+2657543 Msa0308430:CDS
CCTCAACAGACACACTCTTT+CGG 0.372622 2_4:-2655827 None:intergenic
GTCGACATTGGTGGAATTAG+TGG 0.377742 2_4:+2658527 Msa0308430:CDS
GGCTGAAGTTGAAGGCCTTA+AGG 0.383122 2_4:+2657920 Msa0308430:CDS
CATACAGCAAGGTGGAATAA+TGG 0.385527 2_4:-2659542 None:intergenic
GCTGAAGTTGAAGGCCTTAA+GGG 0.395706 2_4:+2657921 Msa0308430:CDS
TCCACCTCCACAAACTTTAG+AGG 0.398733 2_4:-2658383 None:intergenic
CTCAGCAGTGACGGGATCTT+AGG 0.401069 2_4:+2659418 Msa0308430:CDS
TCCTCTAAAGTTTGTGGAGG+TGG 0.403941 2_4:+2658382 Msa0308430:CDS
GAAGAAGCAGGCATAGTTCC+TGG 0.411560 2_4:+2657516 Msa0308430:CDS
TTATGGGTTTGTGTTGTTGT+TGG 0.413642 2_4:-2655939 None:intergenic
AGACTTGCCGCCAGAGGGAC+TGG 0.417394 2_4:+2659453 Msa0308430:CDS
AGAAGAGATTATTGAGTTTG+AGG 0.422123 2_4:+2658358 Msa0308430:CDS
ATCCAATTCCTAGTTGTCCT+TGG 0.432048 2_4:-2658457 None:intergenic
CAGATTATTGATGCAAATAA+AGG 0.442156 2_4:+2657888 Msa0308430:intron
ATCCAAGGACAACTAGGAAT+TGG 0.443348 2_4:+2658455 Msa0308430:CDS
TGTAGGTTCCAACTTCTTTG+TGG 0.443531 2_4:-2658759 None:intergenic
ACTATTGCCCTGTATATTTG+AGG 0.447125 2_4:+2659659 Msa0308430:three_prime_UTR
TGAGGTTCCTCTAAAGTTTG+TGG 0.448327 2_4:+2658376 Msa0308430:CDS
CAAAATGGACTCCCCTCCTA+TGG 0.453863 2_4:+2655913 Msa0308430:CDS
TCCTAGTTGTCCTTGGATGC+CGG 0.460240 2_4:-2658450 None:intergenic
GGATGCCGGCTACGGCTTTG+CGG 0.464033 2_4:-2658436 None:intergenic
GTGCAAAGCCTAAAGCCATA+TGG 0.465137 2_4:+2658497 Msa0308430:CDS
ATAACTTCAGAGTTAATTGA+AGG 0.472524 2_4:+2659728 Msa0308430:three_prime_UTR
AGCCACCGCAAAGCCGTAGC+CGG 0.475388 2_4:+2658431 Msa0308430:CDS
CTTTAGGCTTTGCACAGTGC+CGG 0.475744 2_4:-2658489 None:intergenic
AAGGTGGAATAATGGCAAAA+AGG 0.477657 2_4:-2659534 None:intergenic
ATGTCGACAAAGGCGCCATA+TGG 0.479823 2_4:-2658512 None:intergenic
CTACGGCTTTGCGGTGGCTA+AGG 0.480015 2_4:-2658427 None:intergenic
TGGCTCGTGCTGATATGCTT+AGG 0.493754 2_4:+2659151 Msa0308430:CDS
CAGATAGAAGAAGATAGATA+AGG 0.495089 2_4:-2655786 None:intergenic
ACCGTTGACATCTGTGAGAA+TGG 0.495475 2_4:-2657951 None:intergenic
TGTTGTTGGTTTCCATAGGA+GGG 0.499837 2_4:-2655925 None:intergenic
AGAATGGAACAAATCCCTTA+AGG 0.501700 2_4:-2657935 None:intergenic
GGCGCCTTTGTCGACATTGG+TGG 0.504154 2_4:+2658518 Msa0308430:CDS
AACAAGCAAATACCTCTGGC+TGG 0.506114 2_4:-2659176 None:intergenic
AAAGTTTGTGGAGGTGGACC+AGG 0.506690 2_4:+2658388 Msa0308430:CDS
ATATATAAGCCTATAAATAG+AGG 0.509923 2_4:-2659792 None:intergenic
GTTGTTGGTTTCCATAGGAG+GGG 0.510216 2_4:-2655924 None:intergenic
TCAATCATTATCCTTCAGCT+GGG 0.512179 2_4:-2659492 None:intergenic
TTGTTGTTGGTTTCCATAGG+AGG 0.513399 2_4:-2655926 None:intergenic
ATATTCAGGCTGAGCTTGCA+TGG 0.513898 2_4:+2657607 Msa0308430:CDS
GTGTTGTTGTTGGTTTCCAT+AGG 0.514531 2_4:-2655929 None:intergenic
CAGCTGAAGGATAATGATTG+AGG 0.515085 2_4:+2659494 Msa0308430:exon
ACAAATTCCTCTTTCACGCC+AGG 0.517325 2_4:-2657534 None:intergenic
CATAGTTCCTGGCGTGAAAG+AGG 0.517603 2_4:+2657527 Msa0308430:CDS
AAGTCTTTCCACAAAGAAGT+TGG 0.524278 2_4:+2658751 Msa0308430:CDS
TTGTCCTTGGATGCCGGCTA+CGG 0.530588 2_4:-2658444 None:intergenic
AGCAGAAGATGCTGTTGTCA+AGG 0.532605 2_4:+2657650 Msa0308430:CDS
AGCTGAAGGATAATGATTGA+GGG 0.533178 2_4:+2659495 Msa0308430:exon
TTTCTTATAGGCGGAGGAGA+TGG 0.533602 2_4:+2659089 Msa0308430:intron
GCAATGGAACATACAATACC+AGG 0.537968 2_4:-2655975 None:intergenic
CTTAGGCATGTAGAAGAAGC+AGG 0.540089 2_4:+2657504 Msa0308430:CDS
TATGGCGCCTTTGTCGACAT+TGG 0.542516 2_4:+2658515 Msa0308430:CDS
AGGCTGAGCTTGCATGGGAA+AGG 0.542586 2_4:+2657613 Msa0308430:CDS
TCACTCAGATCCAGTCCCTC+TGG 0.542917 2_4:-2659463 None:intergenic
AAAGCCGTAGCCGGCATCCA+AGG 0.543780 2_4:+2658440 Msa0308430:CDS
AGATGCTGTTGTCAAGGGTA+AGG 0.545420 2_4:+2657656 Msa0308430:CDS
TGAGTCTGAAATTGGAACCA+AGG 0.547889 2_4:+2656139 Msa0308430:CDS
AACTCAATAATCTCTTCTCC+CGG 0.548474 2_4:-2658353 None:intergenic
ACCTTCTCGAATACAAGCGT+TGG 0.548772 2_4:-2658803 None:intergenic
AACAAAAGCTCCACTAGTAT+CGG 0.548885 2_4:-2657424 None:intergenic
GATTAACTCTCAGCAGTGAC+GGG 0.550527 2_4:+2659410 Msa0308430:CDS
ACGTTGTCGTACTGCTCCAA+TGG 0.554804 2_4:+2656061 Msa0308430:CDS
GCGGTGGCTAAGGATAAGTC+TGG 0.558220 2_4:-2658417 None:intergenic
GGTGTGGTGGCTGAAGTTGA+AGG 0.562756 2_4:+2657912 Msa0308430:CDS
CCGAAAGAGTGTGTCTGTTG+AGG 0.565261 2_4:+2655827 Msa0308430:five_prime_UTR
CTACATGCCTAAGTTTGTAG+AGG 0.566419 2_4:-2657494 None:intergenic
TTAAGTCATGACCGCGAGAG+AGG 0.568064 2_4:+2658722 Msa0308430:CDS
AATAGCGCAAGCAGAAGCCA+TGG 0.569153 2_4:+2659131 Msa0308430:CDS
AAGCATATCAGCACGAGCCA+TGG 0.569475 2_4:-2659148 None:intergenic
GGTCAAAATGAAATTGATGA+TGG 0.574050 2_4:+2657564 Msa0308430:CDS
AAGAAGTTGGAACCTACACC+TGG 0.576278 2_4:+2658764 Msa0308430:CDS
TGACATTACTTCAAAGTCCA+CGG 0.579638 2_4:+2657446 Msa0308430:CDS
GAGAGAGATTGGTATGGCCA+TGG 0.580108 2_4:+2655863 Msa0308430:exon
GGATTACGGATCATATCTCC+AGG 0.580645 2_4:-2658782 None:intergenic
GCAGAAGATGCTGTTGTCAA+GGG 0.582875 2_4:+2657651 Msa0308430:CDS
GTAAACGAAACACCTTCCAT+TGG 0.585546 2_4:-2656077 None:intergenic
TTGTTGAGCCACAGACGCCA+TGG 0.587179 2_4:-2655880 None:intergenic
TAATTTGACTGACATGAAGA+AGG 0.587239 2_4:-2658550 None:intergenic
GGTTCAGACTTGCCGCCAGA+GGG 0.588733 2_4:+2659448 Msa0308430:CDS
GGTTCCTCTAAAGTTTGTGG+AGG 0.589105 2_4:+2658379 Msa0308430:CDS
AGGCGAGCCTCTACAAACTT+AGG 0.590454 2_4:+2657487 Msa0308430:CDS
GGCTTACTTGCCGCTACGAG+AGG 0.590952 2_4:+2657467 Msa0308430:CDS
TGGTATGGCCATGGCGTCTG+TGG 0.591247 2_4:+2655872 Msa0308430:exon
TGTCGTACTGCTCCAATGGA+AGG 0.591894 2_4:+2656065 Msa0308430:CDS
GACGGGATCTTAGGACCACT+TGG 0.593072 2_4:+2659427 Msa0308430:CDS
CGGATCATATCTCCAGGTGT+AGG 0.593928 2_4:-2658776 None:intergenic
GCCGGCATCCAAGGACAACT+AGG 0.598178 2_4:+2658449 Msa0308430:CDS
CAATCATTATCCTTCAGCTG+GGG 0.598240 2_4:-2659491 None:intergenic
ATTGCAACTGTTCTTCAACC+TGG 0.598301 2_4:+2658593 Msa0308430:CDS
GGATTAACTCTCAGCAGTGA+CGG 0.600398 2_4:+2659409 Msa0308430:CDS
TATTCAGGCTGAGCTTGCAT+GGG 0.601092 2_4:+2657608 Msa0308430:CDS
TGCCGGCTACGGCTTTGCGG+TGG 0.601418 2_4:-2658433 None:intergenic
TCAACCTGGTGATACTCTGA+AGG 0.607339 2_4:+2658607 Msa0308430:CDS
CATAAACAACAAAGACGCCC+TGG 0.608933 2_4:+2655957 Msa0308430:CDS
TCCATTCTCACAGATGTCAA+CGG 0.609353 2_4:+2657950 Msa0308430:CDS
ATTGGCGCTTGTAATTGCAA+TGG 0.609770 2_4:-2655991 None:intergenic
AATCATTATCCTTCAGCTGG+GGG 0.610002 2_4:-2659490 None:intergenic
GACTTACACGACCTCTCTCG+CGG 0.618963 2_4:-2658733 None:intergenic
ATTATTGATGCAAATAAAGG+TGG 0.619527 2_4:+2657891 Msa0308430:CDS
TCGTAGCGGCAAGTAAGCCG+TGG 0.619880 2_4:-2657463 None:intergenic
TGGTTCAGACTTGCCGCCAG+AGG 0.622339 2_4:+2659447 Msa0308430:CDS
GGAATTGGATCAGTTGTCAC+CGG 0.623309 2_4:+2658470 Msa0308430:CDS
ACAAGTTCCTCAAATATACA+GGG 0.623874 2_4:-2659666 None:intergenic
TGCAAATAAAGGTGGTGTGG+TGG 0.633576 2_4:+2657899 Msa0308430:CDS
AATTCCACCAATGTCGACAA+AGG 0.636907 2_4:-2658522 None:intergenic
GTGTTTGGCACCGATACTAG+TGG 0.637091 2_4:+2657414 Msa0308430:CDS
TTTACCTTCAGAGTATCACC+AGG 0.639151 2_4:-2658611 None:intergenic
TCCAACGCTTGTATTCGAGA+AGG 0.655139 2_4:+2658802 Msa0308430:CDS
GGTGTGAGATATATGAAACG+TGG 0.657196 2_4:-2655765 None:intergenic
TGATGCAAATAAAGGTGGTG+TGG 0.659116 2_4:+2657896 Msa0308430:CDS
TATGCTTAGGTTCCAGCCAG+AGG 0.664471 2_4:+2659164 Msa0308430:CDS
GGCGGCAAGTCTGAACCAAG+TGG 0.672418 2_4:-2659442 None:intergenic
CTCAGATCCAGTCCCTCTGG+CGG 0.676022 2_4:-2659460 None:intergenic
TAGAGGCTCGCCTCTCGTAG+CGG 0.684086 2_4:-2657477 None:intergenic
CTACAACAATACATACAGCA+AGG 0.688470 2_4:-2659553 None:intergenic
CAACAATACATACAGCAAGG+TGG 0.703317 2_4:-2659550 None:intergenic
TAATGATTGAGGGAATTCAG+AGG 0.705206 2_4:+2659505 Msa0308430:exon
CAATGGAACATACAATACCA+GGG 0.706248 2_4:-2655974 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTAAGTAATTTTATTTTA+TGG - chr2_4:2656864-2656883 None:intergenic 10.0%
!!! TTTTATGTATTTTAACTATT+AGG + chr2_4:2657015-2657034 Msa0308430:intron 10.0%
!!! TTTTTATGCTATTTTAATTT+TGG - chr2_4:2659281-2659300 None:intergenic 10.0%
!!! TTTTAAGATGAATTTTGATT+TGG + chr2_4:2656199-2656218 Msa0308430:intron 15.0%
!!! TTTAAGATGAATTTTGATTT+GGG + chr2_4:2656200-2656219 Msa0308430:intron 15.0%
!!! CTTTGTATTTTATTGAATTT+TGG + chr2_4:2656247-2656266 Msa0308430:intron 15.0%
!!! TTTTGGATTTTTTTAGTTTA+TGG + chr2_4:2656264-2656283 Msa0308430:intron 15.0%
!!! TTGTTTTTTTTGTAGAATTT+TGG + chr2_4:2656420-2656439 Msa0308430:intron 15.0%
!!! TGGATTTTTTTAATTTATGA+TGG + chr2_4:2656440-2656459 Msa0308430:intron 15.0%
!!! TTAATTTATGATGGATAAAA+AGG + chr2_4:2656449-2656468 Msa0308430:intron 15.0%
!!! TAATTTATGATGGATAAAAA+GGG + chr2_4:2656450-2656469 Msa0308430:intron 15.0%
!! ATAAACAATATTATACTGTA+AGG - chr2_4:2656632-2656651 None:intergenic 15.0%
!! TTACAGTATAATATTGTTTA+TGG + chr2_4:2656631-2656650 Msa0308430:intron 15.0%
!!! TTTGCAATTTTATATTTTCA+AGG + chr2_4:2657232-2657251 Msa0308430:intron 15.0%
!!! TAAACTTCTAATTTTGATAA+GGG - chr2_4:2658282-2658301 None:intergenic 15.0%
!!! ATACATTGTTAACTTTTAAT+CGG + chr2_4:2659058-2659077 Msa0308430:intron 15.0%
!! ACAAAAGAAAAAATAACAAT+AGG - chr2_4:2659588-2659607 None:intergenic 15.0%
!! TGTTGAATTAATAATGTTTG+TGG + chr2_4:2656174-2656193 Msa0308430:intron 20.0%
!!! TTAAGATGAATTTTGATTTG+GGG + chr2_4:2656201-2656220 Msa0308430:intron 20.0%
!!! TTTTTTAGTTTATGGTGAAA+AGG + chr2_4:2656272-2656291 Msa0308430:intron 20.0%
!!! TTTTTAGTTTATGGTGAAAA+GGG + chr2_4:2656273-2656292 Msa0308430:intron 20.0%
!!! AATTTATGATGGATAAAAAG+GGG + chr2_4:2656451-2656470 Msa0308430:intron 20.0%
!! ATTGTATATGAACAAGAAAA+TGG + chr2_4:2656541-2656560 Msa0308430:intron 20.0%
!! TTGTATATGAACAAGAAAAT+GGG + chr2_4:2656542-2656561 Msa0308430:intron 20.0%
!! TTTCAATTGAATTGAGTATT+TGG + chr2_4:2656586-2656605 Msa0308430:intron 20.0%
!!! ACACATTGTTAGTAATTTTA+TGG - chr2_4:2657213-2657232 None:intergenic 20.0%
!! GCTTGAAAAATAATCATTAA+AGG - chr2_4:2657307-2657326 None:intergenic 20.0%
!!! GTAATTAATCTGAAATAGAT+TGG + chr2_4:2657355-2657374 Msa0308430:intron 20.0%
!!! GATGCAATATATTTTATTTG+TGG + chr2_4:2658117-2658136 Msa0308430:intron 20.0%
!!! AAACTTCTAATTTTGATAAG+GGG - chr2_4:2658281-2658300 None:intergenic 20.0%
!!! CTAAACTTCTAATTTTGATA+AGG - chr2_4:2658283-2658302 None:intergenic 20.0%
!! ATCTCATTCTTTATATGATT+AGG + chr2_4:2658691-2658710 Msa0308430:intron 20.0%
!! GAAAATAATCAAAGAAAGTT+AGG - chr2_4:2658997-2659016 None:intergenic 20.0%
!! ATATATAAGCCTATAAATAG+AGG - chr2_4:2659795-2659814 None:intergenic 20.0%
!!! TATGATTTTGAGTCTGAAAT+TGG + chr2_4:2656131-2656150 Msa0308430:CDS 25.0%
!!! TTTTAAGATGAATTTTGACG+AGG + chr2_4:2656370-2656389 Msa0308430:intron 25.0%
! GAGATAGTTAAGTTAATTTC+TGG + chr2_4:2656665-2656684 Msa0308430:intron 25.0%
!!! GTGTCTTTTTTTAGTCATTT+TGG + chr2_4:2656777-2656796 Msa0308430:intron 25.0%
!! TTAAGAGTAAACAGTCATTT+TGG - chr2_4:2656961-2656980 None:intergenic 25.0%
! ACTAACTAAAAACACATTTG+AGG - chr2_4:2657149-2657168 None:intergenic 25.0%
! TAAAGGCTAAACATTCAATT+GGG - chr2_4:2657290-2657309 None:intergenic 25.0%
! TTAAAGGCTAAACATTCAAT+TGG - chr2_4:2657291-2657310 None:intergenic 25.0%
! TGAAAGAACTATTCATATTG+AGG + chr2_4:2657333-2657352 Msa0308430:intron 25.0%
! AAAGAGGAATTTGTAATTGT+TGG + chr2_4:2657543-2657562 Msa0308430:CDS 25.0%
! AAAACTGTTCATATCCATTT+AGG + chr2_4:2657810-2657829 Msa0308430:intron 25.0%
! CATATGAGTGAAAAAGAAAT+TGG - chr2_4:2657854-2657873 None:intergenic 25.0%
! CAGATTATTGATGCAAATAA+AGG + chr2_4:2657888-2657907 Msa0308430:intron 25.0%
! ATTATTGATGCAAATAAAGG+TGG + chr2_4:2657891-2657910 Msa0308430:CDS 25.0%
! TTGAATCAAAACTTGTCATT+TGG + chr2_4:2658014-2658033 Msa0308430:intron 25.0%
! TGCGAAGAAAATAGATAAAA+GGG - chr2_4:2658326-2658345 None:intergenic 25.0%
! ATATCGATGAATTGTATTAC+AGG - chr2_4:2658637-2658656 None:intergenic 25.0%
!! AATAACAAAGCTAAGCATTT+TGG - chr2_4:2658963-2658982 None:intergenic 25.0%
!!! TCGGTTGATTTTTTTCTTAT+AGG + chr2_4:2659077-2659096 Msa0308430:intron 25.0%
!!! GTTGATTTTTTTCTTATAGG+CGG + chr2_4:2659080-2659099 Msa0308430:intron 25.0%
! ATAACTTCAGAGTTAATTGA+AGG + chr2_4:2659728-2659747 Msa0308430:three_prime_UTR 25.0%
CAGATAGAAGAAGATAGATA+AGG - chr2_4:2655789-2655808 None:intergenic 30.0%
! CTTTGCTCTTTCTTTGTTAT+TGG - chr2_4:2656012-2656031 None:intergenic 30.0%
CAACAAAAAAAAACTTGCCT+TGG - chr2_4:2656159-2656178 None:intergenic 30.0%
! ACATTTTCCTCACAAACATT+AGG - chr2_4:2656515-2656534 None:intergenic 30.0%
TTACTTACAAAAGAGACACT+TGG + chr2_4:2656874-2656893 Msa0308430:intron 30.0%
TACTCTTAATATCTGACCAA+CGG + chr2_4:2656972-2656991 Msa0308430:intron 30.0%
CTAAAAATAATTTCCACCGT+TGG - chr2_4:2656991-2657010 None:intergenic 30.0%
CACACATTTAGAGAACAAAA+TGG - chr2_4:2657048-2657067 None:intergenic 30.0%
! AACATCCCGAAATATCTTTT+TGG + chr2_4:2657109-2657128 Msa0308430:intron 30.0%
ACTAGCCAAAAAGATATTTC+GGG - chr2_4:2657117-2657136 None:intergenic 30.0%
! GACTAGCCAAAAAGATATTT+CGG - chr2_4:2657118-2657137 None:intergenic 30.0%
!!! ATCTTTTTGGCTAGTCATTT+TGG + chr2_4:2657122-2657141 Msa0308430:intron 30.0%
GGTCAAAATGAAATTGATGA+TGG + chr2_4:2657564-2657583 Msa0308430:CDS 30.0%
CTTGAGTTTAAGAGATATTC+AGG + chr2_4:2657593-2657612 Msa0308430:CDS 30.0%
AGTGAAAAAGAAATTGGTAG+GGG - chr2_4:2657848-2657867 None:intergenic 30.0%
GAGTGAAAAAGAAATTGGTA+GGG - chr2_4:2657849-2657868 None:intergenic 30.0%
TGAGTGAAAAAGAAATTGGT+AGG - chr2_4:2657850-2657869 None:intergenic 30.0%
! ACTCATATGTGTAATTTGTG+TGG + chr2_4:2657865-2657884 Msa0308430:intron 30.0%
ACGTTCATAAATGTCAAAGT+AGG - chr2_4:2657987-2658006 None:intergenic 30.0%
! TGTCATTTGGCAAGTAAAAA+AGG + chr2_4:2658027-2658046 Msa0308430:intron 30.0%
!! ATTTGCAATCTTTAGAGCTT+AGG - chr2_4:2658086-2658105 None:intergenic 30.0%
AGTTCCATCATAGATAGTAT+AGG - chr2_4:2658167-2658186 None:intergenic 30.0%
CTGCGAAGAAAATAGATAAA+AGG - chr2_4:2658327-2658346 None:intergenic 30.0%
AGAAGAGATTATTGAGTTTG+AGG + chr2_4:2658358-2658377 Msa0308430:CDS 30.0%
TAATTTGACTGACATGAAGA+AGG - chr2_4:2658553-2658572 None:intergenic 30.0%
CGATATTTGAATAGAGTTAC+AGG + chr2_4:2658651-2658670 Msa0308430:intron 30.0%
GAATATCATATCAGTAGTCA+TGG + chr2_4:2658885-2658904 Msa0308430:intron 30.0%
AATTAACAAGCAAATACCTC+TGG - chr2_4:2659183-2659202 None:intergenic 30.0%
!! TTATTGTTTGTTTTCCAGAG+TGG + chr2_4:2659388-2659407 Msa0308430:intron 30.0%
GAATAATGGCAAAAAGGTAA+AGG - chr2_4:2659531-2659550 None:intergenic 30.0%
! TTTTCAATTTTACACTGTCG+AGG - chr2_4:2659629-2659648 None:intergenic 30.0%
ACAAGTTCCTCAAATATACA+GGG - chr2_4:2659669-2659688 None:intergenic 30.0%
AACAAGTTCCTCAAATATAC+AGG - chr2_4:2659670-2659689 None:intergenic 30.0%
ATGAGAATGCCTCTATTTAT+AGG + chr2_4:2659783-2659802 Msa0308430:three_prime_UTR 30.0%
AACAACTGACAAGCACAAAA+TGG + chr2_4:2655898-2655917 Msa0308430:CDS 35.0%
! TTATGGGTTTGTGTTGTTGT+TGG - chr2_4:2655942-2655961 None:intergenic 35.0%
CAATGGAACATACAATACCA+GGG - chr2_4:2655977-2655996 None:intergenic 35.0%
TTTCAAGAGCTTCTGTAAAC+TGG - chr2_4:2656109-2656128 None:intergenic 35.0%
!! GTAGAATGGACATGTTTTTG+AGG + chr2_4:2656478-2656497 Msa0308430:intron 35.0%
TGGATTACCTAATGTTTGTG+AGG + chr2_4:2656505-2656524 Msa0308430:intron 35.0%
AATGGGTGATTCTAGTACAT+TGG + chr2_4:2656559-2656578 Msa0308430:intron 35.0%
TTGAATGTGTGTTCTGTTAG+TGG + chr2_4:2656831-2656850 Msa0308430:intron 35.0%
! GTTACTTTAGTCCTCAAATG+TGG + chr2_4:2657167-2657186 Msa0308430:intron 35.0%
TGACAACGTCTTACATATTG+AGG + chr2_4:2657262-2657281 Msa0308430:intron 35.0%
GACAACGTCTTACATATTGA+GGG + chr2_4:2657263-2657282 Msa0308430:intron 35.0%
AACAAAAGCTCCACTAGTAT+CGG - chr2_4:2657427-2657446 None:intergenic 35.0%
TGACATTACTTCAAAGTCCA+CGG + chr2_4:2657446-2657465 Msa0308430:CDS 35.0%
GGAGAAAATCAACTCCTAAA+TGG - chr2_4:2657827-2657846 None:intergenic 35.0%
AGAATGGAACAAATCCCTTA+AGG - chr2_4:2657938-2657957 None:intergenic 35.0%
! GGCAAGTAAAAAAGGTACAA+TGG + chr2_4:2658035-2658054 Msa0308430:intron 35.0%
ACAATGGCTATTGAGAGAAA+TGG + chr2_4:2658051-2658070 Msa0308430:intron 35.0%
TCATAGATAGTATAGGAAGG+TGG - chr2_4:2658160-2658179 None:intergenic 35.0%
CCATCATAGATAGTATAGGA+AGG - chr2_4:2658163-2658182 None:intergenic 35.0%
CCTTCCTATACTATCTATGA+TGG + chr2_4:2658160-2658179 Msa0308430:intron 35.0%
! ATTTTCTTCGCAGAAAACAC+CGG + chr2_4:2658334-2658353 Msa0308430:intron 35.0%
AACTCAATAATCTCTTCTCC+CGG - chr2_4:2658356-2658375 None:intergenic 35.0%
AAGTCTTTCCACAAAGAAGT+TGG + chr2_4:2658751-2658770 Msa0308430:CDS 35.0%
!!! TAAGCATTTTGGCTTCTTGT+AGG - chr2_4:2658952-2658971 None:intergenic 35.0%
!! GCTATTGAAAAGTGTTGAAG+TGG - chr2_4:2659019-2659038 None:intergenic 35.0%
!!! GATTTTTTTCTTATAGGCGG+AGG + chr2_4:2659083-2659102 Msa0308430:intron 35.0%
AAAACTATTCAGCAGTAGAG+TGG - chr2_4:2659306-2659325 None:intergenic 35.0%
TCAATCATTATCCTTCAGCT+GGG - chr2_4:2659495-2659514 None:intergenic 35.0%
AGCTGAAGGATAATGATTGA+GGG + chr2_4:2659495-2659514 Msa0308430:exon 35.0%
TAATGATTGAGGGAATTCAG+AGG + chr2_4:2659505-2659524 Msa0308430:exon 35.0%
AAGGTGGAATAATGGCAAAA+AGG - chr2_4:2659537-2659556 None:intergenic 35.0%
CTACAACAATACATACAGCA+AGG - chr2_4:2659556-2659575 None:intergenic 35.0%
ACTATTGCCCTGTATATTTG+AGG + chr2_4:2659659-2659678 Msa0308430:three_prime_UTR 35.0%
GGTGTGAGATATATGAAACG+TGG - chr2_4:2655768-2655787 None:intergenic 40.0%
!! TGTTGTTGGTTTCCATAGGA+GGG - chr2_4:2655928-2655947 None:intergenic 40.0%
!! TTGTTGTTGGTTTCCATAGG+AGG - chr2_4:2655929-2655948 None:intergenic 40.0%
!! GTGTTGTTGTTGGTTTCCAT+AGG - chr2_4:2655932-2655951 None:intergenic 40.0%
!! AGGGCGTCTTTGTTGTTTAT+GGG - chr2_4:2655958-2655977 None:intergenic 40.0%
GCAATGGAACATACAATACC+AGG - chr2_4:2655978-2655997 None:intergenic 40.0%
ATTGGCGCTTGTAATTGCAA+TGG - chr2_4:2655994-2656013 None:intergenic 40.0%
GTAAACGAAACACCTTCCAT+TGG - chr2_4:2656080-2656099 None:intergenic 40.0%
! TGAGTCTGAAATTGGAACCA+AGG + chr2_4:2656139-2656158 Msa0308430:CDS 40.0%
!! TAAAAAGGGGTGCTGTAGAA+TGG + chr2_4:2656464-2656483 Msa0308430:intron 40.0%
!!! GGACATGTTTTTGAGGTTTG+TGG + chr2_4:2656485-2656504 Msa0308430:intron 40.0%
!! TCTGGAGTGAACAGTCATTT+TGG + chr2_4:2656683-2656702 Msa0308430:intron 40.0%
GACGTTGTCTCACACATATA+AGG - chr2_4:2656710-2656729 None:intergenic 40.0%
!! GTGTGTTCTGTTAGTGGATT+TGG + chr2_4:2656837-2656856 Msa0308430:intron 40.0%
! TTTTGGTCTCCACATGAATG+AGG - chr2_4:2656944-2656963 None:intergenic 40.0%
TCTTAATATCTGACCAACGG+TGG + chr2_4:2656975-2656994 Msa0308430:intron 40.0%
TCCTCAAATGTGGATTTCGT+TGG + chr2_4:2657177-2657196 Msa0308430:intron 40.0%
ACCAACGAAATCCACATTTG+AGG - chr2_4:2657181-2657200 None:intergenic 40.0%
!! CTGGTTTGGTTTCAGGTTAA+GGG + chr2_4:2657387-2657406 Msa0308430:intron 40.0%
CTACATGCCTAAGTTTGTAG+AGG - chr2_4:2657497-2657516 None:intergenic 40.0%
TGATGCAAATAAAGGTGGTG+TGG + chr2_4:2657896-2657915 Msa0308430:CDS 40.0%
TCCATTCTCACAGATGTCAA+CGG + chr2_4:2657950-2657969 Msa0308430:CDS 40.0%
!!! GGGAAAGAGTTTTGAGTTGT+TGG - chr2_4:2658306-2658325 None:intergenic 40.0%
! TTTTCTTCGCAGAAAACACC+GGG + chr2_4:2658335-2658354 Msa0308430:intron 40.0%
!! TGAGGTTCCTCTAAAGTTTG+TGG + chr2_4:2658376-2658395 Msa0308430:CDS 40.0%
ATCCAAGGACAACTAGGAAT+TGG + chr2_4:2658455-2658474 Msa0308430:CDS 40.0%
ATCCAATTCCTAGTTGTCCT+TGG - chr2_4:2658460-2658479 None:intergenic 40.0%
AATTCCACCAATGTCGACAA+AGG - chr2_4:2658525-2658544 None:intergenic 40.0%
ATTGCAACTGTTCTTCAACC+TGG + chr2_4:2658593-2658612 Msa0308430:CDS 40.0%
! TTTACCTTCAGAGTATCACC+AGG - chr2_4:2658614-2658633 None:intergenic 40.0%
TGTAGGTTCCAACTTCTTTG+TGG - chr2_4:2658762-2658781 None:intergenic 40.0%
!! CGAATACAAGCGTTGGATTA+CGG - chr2_4:2658799-2658818 None:intergenic 40.0%
! GAAGCAGAAAAAGCATGAAG+TGG - chr2_4:2658918-2658937 None:intergenic 40.0%
AATCATTATCCTTCAGCTGG+GGG - chr2_4:2659493-2659512 None:intergenic 40.0%
CAATCATTATCCTTCAGCTG+GGG - chr2_4:2659494-2659513 None:intergenic 40.0%
CTCAATCATTATCCTTCAGC+TGG - chr2_4:2659496-2659515 None:intergenic 40.0%
CAGCTGAAGGATAATGATTG+AGG + chr2_4:2659494-2659513 Msa0308430:exon 40.0%
CATACAGCAAGGTGGAATAA+TGG - chr2_4:2659545-2659564 None:intergenic 40.0%
CAACAATACATACAGCAAGG+TGG - chr2_4:2659553-2659572 None:intergenic 40.0%
CCTCAACAGACACACTCTTT+CGG - chr2_4:2655830-2655849 None:intergenic 45.0%
AAGCAGAGAGAGAGAGAGAT+TGG + chr2_4:2655852-2655871 Msa0308430:five_prime_UTR 45.0%
GAGAGAGAGAGAGATTGGTA+TGG + chr2_4:2655857-2655876 Msa0308430:exon 45.0%
!! GTTGTTGGTTTCCATAGGAG+GGG - chr2_4:2655927-2655946 None:intergenic 45.0%
!! CAGGGCGTCTTTGTTGTTTA+TGG - chr2_4:2655959-2655978 None:intergenic 45.0%
CATAAACAACAAAGACGCCC+TGG + chr2_4:2655957-2655976 Msa0308430:CDS 45.0%
AATAGATTGGCGACTCTTGC+TGG + chr2_4:2657368-2657387 Msa0308430:intron 45.0%
!! ACTCTTGCTGGTTTGGTTTC+AGG + chr2_4:2657380-2657399 Msa0308430:intron 45.0%
!! GCTGGTTTGGTTTCAGGTTA+AGG + chr2_4:2657386-2657405 Msa0308430:intron 45.0%
CTTAGGCATGTAGAAGAAGC+AGG + chr2_4:2657504-2657523 Msa0308430:CDS 45.0%
ACAAATTCCTCTTTCACGCC+AGG - chr2_4:2657537-2657556 None:intergenic 45.0%
ATATTCAGGCTGAGCTTGCA+TGG + chr2_4:2657607-2657626 Msa0308430:CDS 45.0%
TATTCAGGCTGAGCTTGCAT+GGG + chr2_4:2657608-2657627 Msa0308430:CDS 45.0%
AGCAGAAGATGCTGTTGTCA+AGG + chr2_4:2657650-2657669 Msa0308430:CDS 45.0%
GCAGAAGATGCTGTTGTCAA+GGG + chr2_4:2657651-2657670 Msa0308430:CDS 45.0%
AGATGCTGTTGTCAAGGGTA+AGG + chr2_4:2657656-2657675 Msa0308430:CDS 45.0%
TGCAAATAAAGGTGGTGTGG+TGG + chr2_4:2657899-2657918 Msa0308430:CDS 45.0%
GCTGAAGTTGAAGGCCTTAA+GGG + chr2_4:2657921-2657940 Msa0308430:CDS 45.0%
ACCGTTGACATCTGTGAGAA+TGG - chr2_4:2657954-2657973 None:intergenic 45.0%
!! GGTTCCTCTAAAGTTTGTGG+AGG + chr2_4:2658379-2658398 Msa0308430:CDS 45.0%
!! TCCTCTAAAGTTTGTGGAGG+TGG + chr2_4:2658382-2658401 Msa0308430:CDS 45.0%
TCCACCTCCACAAACTTTAG+AGG - chr2_4:2658386-2658405 None:intergenic 45.0%
GGAATTGGATCAGTTGTCAC+CGG + chr2_4:2658470-2658489 Msa0308430:CDS 45.0%
GTGCAAAGCCTAAAGCCATA+TGG + chr2_4:2658497-2658516 Msa0308430:CDS 45.0%
GTCGACATTGGTGGAATTAG+TGG + chr2_4:2658527-2658546 Msa0308430:CDS 45.0%
TCAACCTGGTGATACTCTGA+AGG + chr2_4:2658607-2658626 Msa0308430:CDS 45.0%
AAGAAGTTGGAACCTACACC+TGG + chr2_4:2658764-2658783 Msa0308430:CDS 45.0%
GGATTACGGATCATATCTCC+AGG - chr2_4:2658785-2658804 None:intergenic 45.0%
TCCAACGCTTGTATTCGAGA+AGG + chr2_4:2658802-2658821 Msa0308430:CDS 45.0%
ACCTTCTCGAATACAAGCGT+TGG - chr2_4:2658806-2658825 None:intergenic 45.0%
TTTCTTATAGGCGGAGGAGA+TGG + chr2_4:2659089-2659108 Msa0308430:intron 45.0%
AACAAGCAAATACCTCTGGC+TGG - chr2_4:2659179-2659198 None:intergenic 45.0%
ATGAAACTGAAGCAGCAGCA+AGG + chr2_4:2659229-2659248 Msa0308430:intron 45.0%
TGAAACTGAAGCAGCAGCAA+GGG + chr2_4:2659230-2659249 Msa0308430:intron 45.0%
TGCTGAGAGTTAATCCACTC+TGG - chr2_4:2659405-2659424 None:intergenic 45.0%
GGATTAACTCTCAGCAGTGA+CGG + chr2_4:2659409-2659428 Msa0308430:CDS 45.0%
GATTAACTCTCAGCAGTGAC+GGG + chr2_4:2659410-2659429 Msa0308430:CDS 45.0%
!!! TTTTAAATTTTAAACATTTA+CGG - chr2_4:2656741-2656760 None:intergenic 5.0%
! CCGAAAGAGTGTGTCTGTTG+AGG + chr2_4:2655827-2655846 Msa0308430:five_prime_UTR 50.0%
GAGAGAGATTGGTATGGCCA+TGG + chr2_4:2655863-2655882 Msa0308430:exon 50.0%
! CAAAATGGACTCCCCTCCTA+TGG + chr2_4:2655913-2655932 Msa0308430:CDS 50.0%
ACGTTGTCGTACTGCTCCAA+TGG + chr2_4:2656061-2656080 Msa0308430:CDS 50.0%
TGTCGTACTGCTCCAATGGA+AGG + chr2_4:2656065-2656084 Msa0308430:CDS 50.0%
! ATTGGCGACTCTTGCTGGTT+TGG + chr2_4:2657373-2657392 Msa0308430:intron 50.0%
!! CAGGTTAAGGGCACTGTGTT+TGG + chr2_4:2657399-2657418 Msa0308430:intron 50.0%
!! GTGTTTGGCACCGATACTAG+TGG + chr2_4:2657414-2657433 Msa0308430:CDS 50.0%
AGGCGAGCCTCTACAAACTT+AGG + chr2_4:2657487-2657506 Msa0308430:CDS 50.0%
GAAGAAGCAGGCATAGTTCC+TGG + chr2_4:2657516-2657535 Msa0308430:CDS 50.0%
CATAGTTCCTGGCGTGAAAG+AGG + chr2_4:2657527-2657546 Msa0308430:CDS 50.0%
GGCTGAAGTTGAAGGCCTTA+AGG + chr2_4:2657920-2657939 Msa0308430:CDS 50.0%
AAAGTTTGTGGAGGTGGACC+AGG + chr2_4:2658388-2658407 Msa0308430:CDS 50.0%
!! GGATAAGTCTGGCTTGTTCC+TGG - chr2_4:2658409-2658428 None:intergenic 50.0%
TCCTAGTTGTCCTTGGATGC+CGG - chr2_4:2658453-2658472 None:intergenic 50.0%
CTTTAGGCTTTGCACAGTGC+CGG - chr2_4:2658492-2658511 None:intergenic 50.0%
!! CAAAGGCGCCATATGGCTTT+AGG - chr2_4:2658508-2658527 None:intergenic 50.0%
!! ATGTCGACAAAGGCGCCATA+TGG - chr2_4:2658515-2658534 None:intergenic 50.0%
TATGGCGCCTTTGTCGACAT+TGG + chr2_4:2658515-2658534 Msa0308430:CDS 50.0%
TTAAGTCATGACCGCGAGAG+AGG + chr2_4:2658722-2658741 Msa0308430:CDS 50.0%
CGGATCATATCTCCAGGTGT+AGG - chr2_4:2658779-2658798 None:intergenic 50.0%
AATAGCGCAAGCAGAAGCCA+TGG + chr2_4:2659131-2659150 Msa0308430:CDS 50.0%
AAGCATATCAGCACGAGCCA+TGG - chr2_4:2659151-2659170 None:intergenic 50.0%
! TGGCTCGTGCTGATATGCTT+AGG + chr2_4:2659151-2659170 Msa0308430:CDS 50.0%
TATGCTTAGGTTCCAGCCAG+AGG + chr2_4:2659164-2659183 Msa0308430:CDS 50.0%
AAGCAGCAGCAAGGGATCAA+AGG + chr2_4:2659238-2659257 Msa0308430:intron 50.0%
TTGTTGAGCCACAGACGCCA+TGG - chr2_4:2655883-2655902 None:intergenic 55.0%
!! GTGAGAGCGCCTCATTCATG+TGG + chr2_4:2656932-2656951 Msa0308430:intron 55.0%
AGGCTGAGCTTGCATGGGAA+AGG + chr2_4:2657613-2657632 Msa0308430:CDS 55.0%
GGTGTGGTGGCTGAAGTTGA+AGG + chr2_4:2657912-2657931 Msa0308430:CDS 55.0%
GCGGTGGCTAAGGATAAGTC+TGG - chr2_4:2658420-2658439 None:intergenic 55.0%
! TTGTCCTTGGATGCCGGCTA+CGG - chr2_4:2658447-2658466 None:intergenic 55.0%
GACTTACACGACCTCTCTCG+CGG - chr2_4:2658736-2658755 None:intergenic 55.0%
! CTCAGCAGTGACGGGATCTT+AGG + chr2_4:2659418-2659437 Msa0308430:CDS 55.0%
GACGGGATCTTAGGACCACT+TGG + chr2_4:2659427-2659446 Msa0308430:CDS 55.0%
TCACTCAGATCCAGTCCCTC+TGG - chr2_4:2659466-2659485 None:intergenic 55.0%
AGTGAGATACCCCCAGCTGA+AGG + chr2_4:2659481-2659500 Msa0308430:CDS 55.0%
TGGTATGGCCATGGCGTCTG+TGG + chr2_4:2655872-2655891 Msa0308430:exon 60.0%
TCGTAGCGGCAAGTAAGCCG+TGG - chr2_4:2657466-2657485 None:intergenic 60.0%
GGCTTACTTGCCGCTACGAG+AGG + chr2_4:2657467-2657486 Msa0308430:CDS 60.0%
TAGAGGCTCGCCTCTCGTAG+CGG - chr2_4:2657480-2657499 None:intergenic 60.0%
CTACGGCTTTGCGGTGGCTA+AGG - chr2_4:2658430-2658449 None:intergenic 60.0%
AAAGCCGTAGCCGGCATCCA+AGG + chr2_4:2658440-2658459 Msa0308430:CDS 60.0%
GCCGGCATCCAAGGACAACT+AGG + chr2_4:2658449-2658468 Msa0308430:CDS 60.0%
GGCGCCTTTGTCGACATTGG+TGG + chr2_4:2658518-2658537 Msa0308430:CDS 60.0%
GGCGGCAAGTCTGAACCAAG+TGG - chr2_4:2659445-2659464 None:intergenic 60.0%
TGGTTCAGACTTGCCGCCAG+AGG + chr2_4:2659447-2659466 Msa0308430:CDS 60.0%
GGTTCAGACTTGCCGCCAGA+GGG + chr2_4:2659448-2659467 Msa0308430:CDS 60.0%
CTCAGATCCAGTCCCTCTGG+CGG - chr2_4:2659463-2659482 None:intergenic 60.0%
AGCCACCGCAAAGCCGTAGC+CGG + chr2_4:2658431-2658450 Msa0308430:CDS 65.0%
! GGATGCCGGCTACGGCTTTG+CGG - chr2_4:2658439-2658458 None:intergenic 65.0%
AGACTTGCCGCCAGAGGGAC+TGG + chr2_4:2659453-2659472 Msa0308430:CDS 65.0%
! TGCCGGCTACGGCTTTGCGG+TGG - chr2_4:2658436-2658455 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 2655759 2659823 2655759 ID=Msa0308430;Name=Msa0308430
chr2_4 mRNA 2655759 2659823 2655759 ID=Msa0308430-mRNA-1;Parent=Msa0308430;Name=Msa0308430-mRNA-1;_AED=0.06;_eAED=0.06;_QI=117|1|1|1|1|1|7|316|407
chr2_4 exon 2655759 2656160 2655759 ID=Msa0308430-mRNA-1:exon:681;Parent=Msa0308430-mRNA-1
chr2_4 exon 2657402 2657677 2657402 ID=Msa0308430-mRNA-1:exon:682;Parent=Msa0308430-mRNA-1
chr2_4 exon 2657891 2657971 2657891 ID=Msa0308430-mRNA-1:exon:683;Parent=Msa0308430-mRNA-1
chr2_4 exon 2658347 2658628 2658347 ID=Msa0308430-mRNA-1:exon:684;Parent=Msa0308430-mRNA-1
chr2_4 exon 2658713 2658823 2658713 ID=Msa0308430-mRNA-1:exon:685;Parent=Msa0308430-mRNA-1
chr2_4 exon 2659099 2659185 2659099 ID=Msa0308430-mRNA-1:exon:686;Parent=Msa0308430-mRNA-1
chr2_4 exon 2659406 2659823 2659406 ID=Msa0308430-mRNA-1:exon:687;Parent=Msa0308430-mRNA-1
chr2_4 five_prime_UTR 2655759 2655875 2655759 ID=Msa0308430-mRNA-1:five_prime_utr;Parent=Msa0308430-mRNA-1
chr2_4 CDS 2655876 2656160 2655876 ID=Msa0308430-mRNA-1:cds;Parent=Msa0308430-mRNA-1
chr2_4 CDS 2657402 2657677 2657402 ID=Msa0308430-mRNA-1:cds;Parent=Msa0308430-mRNA-1
chr2_4 CDS 2657891 2657971 2657891 ID=Msa0308430-mRNA-1:cds;Parent=Msa0308430-mRNA-1
chr2_4 CDS 2658347 2658628 2658347 ID=Msa0308430-mRNA-1:cds;Parent=Msa0308430-mRNA-1
chr2_4 CDS 2658713 2658823 2658713 ID=Msa0308430-mRNA-1:cds;Parent=Msa0308430-mRNA-1
chr2_4 CDS 2659099 2659185 2659099 ID=Msa0308430-mRNA-1:cds;Parent=Msa0308430-mRNA-1
chr2_4 CDS 2659406 2659507 2659406 ID=Msa0308430-mRNA-1:cds;Parent=Msa0308430-mRNA-1
chr2_4 three_prime_UTR 2659508 2659823 2659508 ID=Msa0308430-mRNA-1:three_prime_utr;Parent=Msa0308430-mRNA-1
Gene Sequence

>Msa0308430

ATGGCCATGGCGTCTGTGGCTCAACAACTGACAAGCACAAAATGGACTCCCCTCCTATGGAAACCAACAACAACACAAACCCATAAACAACAAAGACGCCCTGGTATTGTATGTTCCATTGCAATTACAAGCGCCAATAACAAAGAAAGAGCAAAGCTTAAAGAGCTTTTCGATAATGCTTATGAACGTTGTCGTACTGCTCCAATGGAAGGTGTTTCGTTTACTCTTGACCAGTTTACAGAAGCTCTTGAAAAATATGATTTTGAGTCTGAAATTGGAACCAAGGTTAAGGGCACTGTGTTTGGCACCGATACTAGTGGAGCTTTTGTTGACATTACTTCAAAGTCCACGGCTTACTTGCCGCTACGAGAGGCGAGCCTCTACAAACTTAGGCATGTAGAAGAAGCAGGCATAGTTCCTGGCGTGAAAGAGGAATTTGTAATTGTTGGTCAAAATGAAATTGATGATGGTATGATCTTGAGTTTAAGAGATATTCAGGCTGAGCTTGCATGGGAAAGGTGTAGACAACTTCAAGCAGAAGATGCTGTTGTCAAGGGTAAGATTATTGATGCAAATAAAGGTGGTGTGGTGGCTGAAGTTGAAGGCCTTAAGGGATTTGTTCCATTCTCACAGATGTCAACGAAAACACCGGGAGAAGAGATTATTGAGTTTGAGGTTCCTCTAAAGTTTGTGGAGGTGGACCAGGAACAAGCCAGACTTATCCTTAGCCACCGCAAAGCCGTAGCCGGCATCCAAGGACAACTAGGAATTGGATCAGTTGTCACCGGCACTGTGCAAAGCCTAAAGCCATATGGCGCCTTTGTCGACATTGGTGGAATTAGTGGCCTTCTTCATGTCAGTCAAATTAGTCACGATCGTATATCAGATATTGCAACTGTTCTTCAACCTGGTGATACTCTGAAGGTGATGATCTTAAGTCATGACCGCGAGAGAGGTCGTGTAAGTCTTTCCACAAAGAAGTTGGAACCTACACCTGGAGATATGATCCGTAATCCAACGCTTGTATTCGAGAAGGCGGAGGAGATGGCTCAGACATTCAGACAGAGAATAGCGCAAGCAGAAGCCATGGCTCGTGCTGATATGCTTAGGTTCCAGCCAGAGAGTGGATTAACTCTCAGCAGTGACGGGATCTTAGGACCACTTGGTTCAGACTTGCCGCCAGAGGGACTGGATCTGAGTGAGATACCCCCAGCTGAAGGATAA

Protein sequence

>Msa0308430

MAMASVAQQLTSTKWTPLLWKPTTTQTHKQQRRPGIVCSIAITSANNKERAKLKELFDNAYERCRTAPMEGVSFTLDQFTEALEKYDFESEIGTKVKGTVFGTDTSGAFVDITSKSTAYLPLREASLYKLRHVEEAGIVPGVKEEFVIVGQNEIDDGMILSLRDIQAELAWERCRQLQAEDAVVKGKIIDANKGGVVAEVEGLKGFVPFSQMSTKTPGEEIIEFEVPLKFVEVDQEQARLILSHRKAVAGIQGQLGIGSVVTGTVQSLKPYGAFVDIGGISGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPTLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSDLPPEGLDLSEIPPAEG*