AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1206030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206030 MtrunA17_Chr4g0054101 93.376 468 27 3 24 490 1 465 0.0 881
Msa1206030 MtrunA17_Chr4g0002031 92.623 366 23 3 24 388 1 363 0.0 673
Msa1206030 MtrunA17_Chr5g0401101 66.876 477 142 7 24 491 1 470 0.0 653
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206030 AT3G49880.1 64.043 470 143 7 26 484 4 458 0.0 611
Msa1206030 AT5G67540.2 62.900 469 146 8 35 484 12 471 0.0 599
Msa1206030 AT5G67540.3 62.900 469 146 8 35 484 34 493 0.0 599
Msa1206030 AT5G67540.1 63.191 470 142 10 35 484 8 466 0.0 598

Find 104 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCAGCTGAGACAATCTT+AGG 0.186965 8_1:+62756460 Msa1206030:CDS
AAATTTCAAATACTTATTAT+TGG 0.207042 8_1:+62755052 Msa1206030:CDS
TCCTGGTTTGTTTATCTTCA+TGG 0.221019 8_1:+62756585 Msa1206030:CDS
CTATGTCACTAGTAATAATA+TGG 0.224189 8_1:+62754650 Msa1206030:CDS
ACTGCTACCCTGGGAGAATT+TGG 0.230166 8_1:+62754974 Msa1206030:CDS
GCTATTCTTCTAAGGATCTA+TGG 0.248673 8_1:+62755957 Msa1206030:CDS
TTGCAACGAAAATTCGTAAT+TGG 0.249294 8_1:-62754607 None:intergenic
ACCATTGGTTGATGAATTCT+TGG 0.278506 8_1:+62754852 Msa1206030:CDS
TTTCAACTTGTTGGAGTTGA+TGG 0.278724 8_1:-62754768 None:intergenic
AGTCAACCATGGTTGCAATT+TGG 0.279964 8_1:-62754383 None:intergenic
GGCCAAGAGTTTCTATCTAT+TGG 0.280101 8_1:+62756719 Msa1206030:CDS
TTCTCATTGTAAATAACTTT+TGG 0.283365 8_1:-62756064 None:intergenic
CTTCCTTTACCTAAGTTTCC+TGG 0.285443 8_1:+62756568 Msa1206030:CDS
TTTGATATCCATGCGGTCTT+TGG 0.289529 8_1:-62756198 None:intergenic
AGTTGGTTGCTATTCTTCTA+AGG 0.296029 8_1:+62755949 Msa1206030:CDS
ATATGGGGTTTATTAATCTT+AGG 0.298477 8_1:+62754667 Msa1206030:CDS
ACACTCACCTGGAACTTTAT+AGG 0.333849 8_1:-62754438 None:intergenic
ATTGATCCAATGAAGACTAT+AGG 0.340719 8_1:+62754925 Msa1206030:CDS
CCTTTCCCTATAGTCTTCAT+TGG 0.349246 8_1:-62754931 None:intergenic
GAAGATCAAGCACTTCAATA+TGG 0.356355 8_1:+62756679 Msa1206030:CDS
CTCCATCAGGTGGACATTAT+AGG 0.359766 8_1:+62755926 Msa1206030:intron
ATTCTCTCCTATAAAGTTCC+AGG 0.361333 8_1:+62754431 Msa1206030:CDS
TGGTTGCCTTTGATTGTTGA+TGG 0.375658 8_1:+62756652 Msa1206030:CDS
TTATCTTCATGGCGGATAGA+TGG 0.376808 8_1:+62756596 Msa1206030:CDS
TAAGAGATTCAAGATATGTT+TGG 0.401561 8_1:+62756632 Msa1206030:CDS
TTGATCCAATGAAGACTATA+GGG 0.410737 8_1:+62754926 Msa1206030:CDS
CTTGAATCTCTTAACTCACT+TGG 0.414129 8_1:-62756622 None:intergenic
CCTTTGTGTTTGAACATAGC+CGG 0.433704 8_1:-62756379 None:intergenic
TCAAATACTTATTATTGGTA+TGG 0.434316 8_1:+62755057 Msa1206030:CDS
AGGAGGATGAATGATATTGA+AGG 0.445423 8_1:-62754728 None:intergenic
TTAGGGACATGGGAAACAAT+TGG 0.448046 8_1:+62756478 Msa1206030:CDS
TTATTATGAGCAAGGTAAGT+AGG 0.456459 8_1:-62755096 None:intergenic
TGGCTACCAAGGTATTTGAA+TGG 0.456566 8_1:-62756178 None:intergenic
TATGTCACTAGTAATAATAT+GGG 0.459282 8_1:+62754651 Msa1206030:CDS
ATTGCGGATTGATCTGCCCT+CGG 0.466490 8_1:-62754360 None:intergenic
ATAAACAAACCAGGAAACTT+AGG 0.469675 8_1:-62756577 None:intergenic
CACCCTCCATGAGCTTGAAT+AGG 0.470225 8_1:-62755015 None:intergenic
AGTTATAATTACTGCTACCC+TGG 0.470470 8_1:+62754964 Msa1206030:CDS
TCAACTCCAACAAGTTGAAA+AGG 0.485321 8_1:+62754771 Msa1206030:CDS
TTGCGGATTGATCTGCCCTC+GGG 0.491491 8_1:-62754359 None:intergenic
ACATATTACATGGTTACATC+AGG 0.501941 8_1:+62756403 Msa1206030:CDS
GTCCTTTGTTATTATGAGCA+AGG 0.505074 8_1:-62755104 None:intergenic
GGAAATCCTATTCAAGCTCA+TGG 0.506131 8_1:+62755009 Msa1206030:CDS
CAGGTGGACATTATAGGAGT+TGG 0.509259 8_1:+62755932 Msa1206030:intron
CTACCCTGGGAGAATTTGGT+TGG 0.510007 8_1:+62754978 Msa1206030:CDS
GAATGAACAAGTGCTTCATT+TGG 0.511215 8_1:-62756442 None:intergenic
ATGGTTACATCAGGTTGCAC+TGG 0.512390 8_1:+62756412 Msa1206030:CDS
GACCGCATGGATATCAAAGC+CGG 0.513956 8_1:+62756203 Msa1206030:CDS
AATGGAAACTGCCTTTGGGT+TGG 0.518583 8_1:+62756749 Msa1206030:CDS
CATGGTTGCAATTTGGATTG+CGG 0.521291 8_1:-62754376 None:intergenic
CTGAGACAATCTTAGGGACA+TGG 0.522359 8_1:+62756467 Msa1206030:CDS
TTACATCAGGTTGCACTGGA+TGG 0.529710 8_1:+62756416 Msa1206030:CDS
TATTATGAGCAAGGTAAGTA+GGG 0.532830 8_1:-62755095 None:intergenic
AAACCAGGAAACTTAGGTAA+AGG 0.536263 8_1:-62756571 None:intergenic
TACATCAGGTTGCACTGGAT+GGG 0.537898 8_1:+62756417 Msa1206030:CDS
CTTTGAAAAGTGTCATGTCC+CGG 0.538558 8_1:-62756222 None:intergenic
AGAATTTGGTTGGATACTGA+TGG 0.538862 8_1:+62754988 Msa1206030:CDS
CGCAATCCAAATTGCAACCA+TGG 0.539159 8_1:+62754377 Msa1206030:exon
GGTGTTATTGACTTGCTTTG+AGG 0.541852 8_1:-62754832 None:intergenic
TGCCAATAGATAGAAACTCT+TGG 0.542445 8_1:-62756721 None:intergenic
TGGAAATGAGAAGGAAGAGA+AGG 0.543749 8_1:-62754748 None:intergenic
TGGTATGGTGAATATAAAGA+TGG 0.548966 8_1:+62755072 Msa1206030:CDS
AAATGAGAAGGAAGAGAAGG+AGG 0.550677 8_1:-62754745 None:intergenic
TCATGTCCATCAACAATCAA+AGG 0.551449 8_1:-62756658 None:intergenic
ATTGGAAATCCATGTGTTGG+TGG 0.555806 8_1:+62756496 Msa1206030:CDS
AAGCAAGTCAATAACACCAT+TGG 0.559003 8_1:+62754837 Msa1206030:CDS
ATTCAGCTGAGACAATCTTA+GGG 0.560376 8_1:+62756461 Msa1206030:CDS
TGAAAGTGACTTACACGAGC+AGG 0.561123 8_1:-62755126 None:intergenic
CTTCTAAGGATCTATGGACC+TGG 0.567240 8_1:+62755963 Msa1206030:CDS
ATAGGAGAGAATGAATGAGT+TGG 0.575613 8_1:-62754420 None:intergenic
GTTATAATTACTGCTACCCT+GGG 0.579486 8_1:+62754965 Msa1206030:CDS
GTATCCAACCAAATTCTCCC+AGG 0.580663 8_1:-62754982 None:intergenic
ACCGGTCCATTCAAATACCT+TGG 0.583019 8_1:+62756172 Msa1206030:CDS
TTGAGATAATCTTCAGTCAA+GGG 0.584839 8_1:-62756307 None:intergenic
ACCAAGGTATTTGAATGGAC+CGG 0.587941 8_1:-62756173 None:intergenic
AGGATGAATGATATTGAAGG+AGG 0.591474 8_1:-62754725 None:intergenic
TTGAATGTGTTCCAACCCAA+AGG 0.592407 8_1:-62756760 None:intergenic
ATTGAGATAATCTTCAGTCA+AGG 0.592919 8_1:-62756308 None:intergenic
GAAAACAATGTAATGCACAT+TGG 0.594015 8_1:+62756283 Msa1206030:CDS
ACCGCATGGATATCAAAGCC+GGG 0.595132 8_1:+62756204 Msa1206030:CDS
CGGTCAGCGAAGAGAAGCGC+CGG 0.596526 8_1:+62756360 Msa1206030:CDS
CATGCGGTCTTTGGCTACCA+AGG 0.596927 8_1:-62756189 None:intergenic
GCATTCAGTGATACTCCTAC+CGG 0.598208 8_1:+62756154 Msa1206030:CDS
CCAATGAAGACTATAGGGAA+AGG 0.603987 8_1:+62754931 Msa1206030:CDS
TACCTTGCTCATAATAACAA+AGG 0.607221 8_1:+62755102 Msa1206030:CDS
ACACAAAGGAACATATTACA+TGG 0.610656 8_1:+62756393 Msa1206030:CDS
ATCCTATTCAAGCTCATGGA+GGG 0.611296 8_1:+62755013 Msa1206030:CDS
CTTGGTAGCCAAAGACCGCA+TGG 0.613799 8_1:+62756190 Msa1206030:CDS
AAACAAGAAAGTATGTGATG+TGG 0.618490 8_1:+62756086 Msa1206030:CDS
TGAGACAATCTTAGGGACAT+GGG 0.620421 8_1:+62756468 Msa1206030:CDS
TCCAAGAATTCATCAACCAA+TGG 0.620834 8_1:-62754853 None:intergenic
ATCACTGAATGCTATGCCGA+CGG 0.621301 8_1:-62756143 None:intergenic
TGGAGTTGATGGAAATGAGA+AGG 0.629494 8_1:-62754757 None:intergenic
ACAATTGGAAATCCATGTGT+TGG 0.635790 8_1:+62756493 Msa1206030:CDS
ATGTCACTAGTAATAATATG+GGG 0.640588 8_1:+62754652 Msa1206030:CDS
TGGTTTGTTTATCTTCATGG+CGG 0.648154 8_1:+62756588 Msa1206030:CDS
TATTGTTGAGTAGTCAACCA+TGG 0.662866 8_1:-62754394 None:intergenic
AGGTATTTGAATGGACCGGT+AGG 0.664578 8_1:-62756169 None:intergenic
TATCCAACCAAATTCTCCCA+GGG 0.669311 8_1:-62754981 None:intergenic
CCGGCTATGTTCAAACACAA+AGG 0.678714 8_1:+62756379 Msa1206030:CDS
AATTACGCAAAAGCTTCCGT+CGG 0.686419 8_1:+62756127 Msa1206030:CDS
AATCCTATTCAAGCTCATGG+AGG 0.687704 8_1:+62755012 Msa1206030:CDS
GCCATGAAGATAAACAAACC+AGG 0.690008 8_1:-62756586 None:intergenic
TCCCGGCTTTGATATCCATG+CGG 0.711426 8_1:-62756205 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTCAAATACTTATTAT+TGG + chr8_1:62755052-62755071 Msa1206030:CDS 10.0%
!! AAATTTCAAATACTTATTAT+TGG + chr8_1:62755052-62755071 Msa1206030:CDS 10.0%
!! GTAAAATGTAAGTTATAATA+AGG - chr8_1:62755346-62755365 None:intergenic 15.0%
!! GTAAAATGTAAGTTATAATA+AGG - chr8_1:62755346-62755365 None:intergenic 15.0%
!! TATGTCACTAGTAATAATAT+GGG + chr8_1:62754651-62754670 Msa1206030:CDS 20.0%
!! TCAAATACTTATTATTGGTA+TGG + chr8_1:62755057-62755076 Msa1206030:CDS 20.0%
!! TAACATACTTCTATAACAAA+AGG - chr8_1:62755368-62755387 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAATC+AGG + chr8_1:62755417-62755436 Msa1206030:intron 20.0%
!!! TTAAGTTGTTTATTCAATCA+GGG + chr8_1:62755418-62755437 Msa1206030:intron 20.0%
!! ATGAAAAGAACATTTGATAT+GGG - chr8_1:62755488-62755507 None:intergenic 20.0%
!!! TTCTCATTGTAAATAACTTT+TGG - chr8_1:62756067-62756086 None:intergenic 20.0%
!! TATGTCACTAGTAATAATAT+GGG + chr8_1:62754651-62754670 Msa1206030:CDS 20.0%
!! TCAAATACTTATTATTGGTA+TGG + chr8_1:62755057-62755076 Msa1206030:CDS 20.0%
!! TAACATACTTCTATAACAAA+AGG - chr8_1:62755368-62755387 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAATC+AGG + chr8_1:62755417-62755436 Msa1206030:intron 20.0%
!!! TTAAGTTGTTTATTCAATCA+GGG + chr8_1:62755418-62755437 Msa1206030:intron 20.0%
!! ATGAAAAGAACATTTGATAT+GGG - chr8_1:62755488-62755507 None:intergenic 20.0%
!!! TTCTCATTGTAAATAACTTT+TGG - chr8_1:62756067-62756086 None:intergenic 20.0%
! CTATGTCACTAGTAATAATA+TGG + chr8_1:62754650-62754669 Msa1206030:CDS 25.0%
! ATGTCACTAGTAATAATATG+GGG + chr8_1:62754652-62754671 Msa1206030:CDS 25.0%
! ATATGGGGTTTATTAATCTT+AGG + chr8_1:62754667-62754686 Msa1206030:CDS 25.0%
!!! CTTATTTTTATAAGCTCTTC+AGG + chr8_1:62755304-62755323 Msa1206030:intron 25.0%
! GATGAAAAGAACATTTGATA+TGG - chr8_1:62755489-62755508 None:intergenic 25.0%
! ATCCAATTCAAAGTTTCTTA+TGG + chr8_1:62755506-62755525 Msa1206030:intron 25.0%
! AACCATAAGAAACTTTGAAT+TGG - chr8_1:62755511-62755530 None:intergenic 25.0%
!!! AAAACTTCAATTGATAATGG+TGG - chr8_1:62755728-62755747 None:intergenic 25.0%
! CCAAAAACTTCAATTGATAA+TGG - chr8_1:62755731-62755750 None:intergenic 25.0%
!! CCATTATCAATTGAAGTTTT+TGG + chr8_1:62755728-62755747 Msa1206030:intron 25.0%
! GGAAATTGTATTTGTTTCAT+AGG + chr8_1:62755754-62755773 Msa1206030:intron 25.0%
!! ATCAAATGCAAATACTGTTT+TGG + chr8_1:62755872-62755891 Msa1206030:intron 25.0%
! TAAGAGATTCAAGATATGTT+TGG + chr8_1:62756632-62756651 Msa1206030:CDS 25.0%
!!! ATGGTTTTGATAACACATTT+TGG + chr8_1:62756698-62756717 Msa1206030:CDS 25.0%
! CTATCTATTGGCATAAAAAA+TGG + chr8_1:62756731-62756750 Msa1206030:CDS 25.0%
! CTATGTCACTAGTAATAATA+TGG + chr8_1:62754650-62754669 Msa1206030:CDS 25.0%
! ATGTCACTAGTAATAATATG+GGG + chr8_1:62754652-62754671 Msa1206030:CDS 25.0%
! ATATGGGGTTTATTAATCTT+AGG + chr8_1:62754667-62754686 Msa1206030:CDS 25.0%
!!! CTTATTTTTATAAGCTCTTC+AGG + chr8_1:62755304-62755323 Msa1206030:intron 25.0%
! GATGAAAAGAACATTTGATA+TGG - chr8_1:62755489-62755508 None:intergenic 25.0%
! ATCCAATTCAAAGTTTCTTA+TGG + chr8_1:62755506-62755525 Msa1206030:intron 25.0%
! AACCATAAGAAACTTTGAAT+TGG - chr8_1:62755511-62755530 None:intergenic 25.0%
!!! AAAACTTCAATTGATAATGG+TGG - chr8_1:62755728-62755747 None:intergenic 25.0%
! CCAAAAACTTCAATTGATAA+TGG - chr8_1:62755731-62755750 None:intergenic 25.0%
!! CCATTATCAATTGAAGTTTT+TGG + chr8_1:62755728-62755747 Msa1206030:intron 25.0%
! GGAAATTGTATTTGTTTCAT+AGG + chr8_1:62755754-62755773 Msa1206030:intron 25.0%
!! ATCAAATGCAAATACTGTTT+TGG + chr8_1:62755872-62755891 Msa1206030:intron 25.0%
! TAAGAGATTCAAGATATGTT+TGG + chr8_1:62756632-62756651 Msa1206030:CDS 25.0%
!!! ATGGTTTTGATAACACATTT+TGG + chr8_1:62756698-62756717 Msa1206030:CDS 25.0%
! CTATCTATTGGCATAAAAAA+TGG + chr8_1:62756731-62756750 Msa1206030:CDS 25.0%
TTGCAACGAAAATTCGTAAT+TGG - chr8_1:62754610-62754629 None:intergenic 30.0%
!!! TCAATAGCACTTGTTTTATG+AGG - chr8_1:62754910-62754929 None:intergenic 30.0%
ATTGATCCAATGAAGACTAT+AGG + chr8_1:62754925-62754944 Msa1206030:CDS 30.0%
TTGATCCAATGAAGACTATA+GGG + chr8_1:62754926-62754945 Msa1206030:CDS 30.0%
TGGTATGGTGAATATAAAGA+TGG + chr8_1:62755072-62755091 Msa1206030:CDS 30.0%
TATTATGAGCAAGGTAAGTA+GGG - chr8_1:62755098-62755117 None:intergenic 30.0%
TTATTATGAGCAAGGTAAGT+AGG - chr8_1:62755099-62755118 None:intergenic 30.0%
TACCTTGCTCATAATAACAA+AGG + chr8_1:62755102-62755121 Msa1206030:CDS 30.0%
CTTATCTACTGACATGAATA+CGG + chr8_1:62755217-62755236 Msa1206030:intron 30.0%
TTATCTACTGACATGAATAC+GGG + chr8_1:62755218-62755237 Msa1206030:intron 30.0%
AAAGCATATACACATGTCAT+AGG - chr8_1:62755275-62755294 None:intergenic 30.0%
!!! TATCAATTGAAGTTTTTGGC+AGG + chr8_1:62755732-62755751 Msa1206030:intron 30.0%
!!! ATCAATTGAAGTTTTTGGCA+GGG + chr8_1:62755733-62755752 Msa1206030:intron 30.0%
TTTGTTTCATAGGACTAATG+TGG + chr8_1:62755764-62755783 Msa1206030:intron 30.0%
! TGAGATATAGACTAGAGTTT+TGG - chr8_1:62755898-62755917 None:intergenic 30.0%
!!! TACAATACCTTCTTTTTTCC+AGG - chr8_1:62755984-62756003 None:intergenic 30.0%
! AAACAAGAAAGTATGTGATG+TGG + chr8_1:62756086-62756105 Msa1206030:CDS 30.0%
GAAAACAATGTAATGCACAT+TGG + chr8_1:62756283-62756302 Msa1206030:CDS 30.0%
TTGAGATAATCTTCAGTCAA+GGG - chr8_1:62756310-62756329 None:intergenic 30.0%
ATTGAGATAATCTTCAGTCA+AGG - chr8_1:62756311-62756330 None:intergenic 30.0%
! GTCATGAAAAGAATTTTCGT+CGG + chr8_1:62756340-62756359 Msa1206030:CDS 30.0%
ACACAAAGGAACATATTACA+TGG + chr8_1:62756393-62756412 Msa1206030:CDS 30.0%
ACATATTACATGGTTACATC+AGG + chr8_1:62756403-62756422 Msa1206030:CDS 30.0%
ATAAACAAACCAGGAAACTT+AGG - chr8_1:62756580-62756599 None:intergenic 30.0%
TAAAAAATGGAAACTGCCTT+TGG + chr8_1:62756744-62756763 Msa1206030:CDS 30.0%
AAAAAATGGAAACTGCCTTT+GGG + chr8_1:62756745-62756764 Msa1206030:CDS 30.0%
TTGCAACGAAAATTCGTAAT+TGG - chr8_1:62754610-62754629 None:intergenic 30.0%
!!! TCAATAGCACTTGTTTTATG+AGG - chr8_1:62754910-62754929 None:intergenic 30.0%
ATTGATCCAATGAAGACTAT+AGG + chr8_1:62754925-62754944 Msa1206030:CDS 30.0%
TTGATCCAATGAAGACTATA+GGG + chr8_1:62754926-62754945 Msa1206030:CDS 30.0%
TGGTATGGTGAATATAAAGA+TGG + chr8_1:62755072-62755091 Msa1206030:CDS 30.0%
TATTATGAGCAAGGTAAGTA+GGG - chr8_1:62755098-62755117 None:intergenic 30.0%
TTATTATGAGCAAGGTAAGT+AGG - chr8_1:62755099-62755118 None:intergenic 30.0%
TACCTTGCTCATAATAACAA+AGG + chr8_1:62755102-62755121 Msa1206030:CDS 30.0%
CTTATCTACTGACATGAATA+CGG + chr8_1:62755217-62755236 Msa1206030:intron 30.0%
TTATCTACTGACATGAATAC+GGG + chr8_1:62755218-62755237 Msa1206030:intron 30.0%
AAAGCATATACACATGTCAT+AGG - chr8_1:62755275-62755294 None:intergenic 30.0%
!!! TATCAATTGAAGTTTTTGGC+AGG + chr8_1:62755732-62755751 Msa1206030:intron 30.0%
!!! ATCAATTGAAGTTTTTGGCA+GGG + chr8_1:62755733-62755752 Msa1206030:intron 30.0%
TTTGTTTCATAGGACTAATG+TGG + chr8_1:62755764-62755783 Msa1206030:intron 30.0%
! TGAGATATAGACTAGAGTTT+TGG - chr8_1:62755898-62755917 None:intergenic 30.0%
!!! TACAATACCTTCTTTTTTCC+AGG - chr8_1:62755984-62756003 None:intergenic 30.0%
! AAACAAGAAAGTATGTGATG+TGG + chr8_1:62756086-62756105 Msa1206030:CDS 30.0%
GAAAACAATGTAATGCACAT+TGG + chr8_1:62756283-62756302 Msa1206030:CDS 30.0%
TTGAGATAATCTTCAGTCAA+GGG - chr8_1:62756310-62756329 None:intergenic 30.0%
ATTGAGATAATCTTCAGTCA+AGG - chr8_1:62756311-62756330 None:intergenic 30.0%
! GTCATGAAAAGAATTTTCGT+CGG + chr8_1:62756340-62756359 Msa1206030:CDS 30.0%
ACACAAAGGAACATATTACA+TGG + chr8_1:62756393-62756412 Msa1206030:CDS 30.0%
ACATATTACATGGTTACATC+AGG + chr8_1:62756403-62756422 Msa1206030:CDS 30.0%
ATAAACAAACCAGGAAACTT+AGG - chr8_1:62756580-62756599 None:intergenic 30.0%
TAAAAAATGGAAACTGCCTT+TGG + chr8_1:62756744-62756763 Msa1206030:CDS 30.0%
AAAAAATGGAAACTGCCTTT+GGG + chr8_1:62756745-62756764 Msa1206030:CDS 30.0%
TATTGTTGAGTAGTCAACCA+TGG - chr8_1:62754397-62754416 None:intergenic 35.0%
ATAGGAGAGAATGAATGAGT+TGG - chr8_1:62754423-62754442 None:intergenic 35.0%
ATTCTCTCCTATAAAGTTCC+AGG + chr8_1:62754431-62754450 Msa1206030:CDS 35.0%
TGTAGAGCTTGAGAAAAATG+AGG + chr8_1:62754563-62754582 Msa1206030:intron 35.0%
AGGATGAATGATATTGAAGG+AGG - chr8_1:62754728-62754747 None:intergenic 35.0%
AGGAGGATGAATGATATTGA+AGG - chr8_1:62754731-62754750 None:intergenic 35.0%
!! TTTCAACTTGTTGGAGTTGA+TGG - chr8_1:62754771-62754790 None:intergenic 35.0%
! TCAACTCCAACAAGTTGAAA+AGG + chr8_1:62754771-62754790 Msa1206030:CDS 35.0%
! AGTTCTCCTTTTCAACTTGT+TGG - chr8_1:62754780-62754799 None:intergenic 35.0%
AAGCAAGTCAATAACACCAT+TGG + chr8_1:62754837-62754856 Msa1206030:CDS 35.0%
!! ACCATTGGTTGATGAATTCT+TGG + chr8_1:62754852-62754871 Msa1206030:CDS 35.0%
TCCAAGAATTCATCAACCAA+TGG - chr8_1:62754856-62754875 None:intergenic 35.0%
AGTTATAATTACTGCTACCC+TGG + chr8_1:62754964-62754983 Msa1206030:CDS 35.0%
GTTATAATTACTGCTACCCT+GGG + chr8_1:62754965-62754984 Msa1206030:CDS 35.0%
AGAATTTGGTTGGATACTGA+TGG + chr8_1:62754988-62755007 Msa1206030:CDS 35.0%
!! GTCCTTTGTTATTATGAGCA+AGG - chr8_1:62755107-62755126 None:intergenic 35.0%
TATAAACTCCTACAACCAAC+TGG - chr8_1:62755456-62755475 None:intergenic 35.0%
AGACATTGGAATTGCTCAAT+TGG - chr8_1:62755677-62755696 None:intergenic 35.0%
TAGTTCAGAACTCAAGACAT+TGG - chr8_1:62755691-62755710 None:intergenic 35.0%
!! TCAATTGATAATGGTGGTGA+TGG - chr8_1:62755722-62755741 None:intergenic 35.0%
! AGTTGGTTGCTATTCTTCTA+AGG + chr8_1:62755949-62755968 Msa1206030:CDS 35.0%
! GCTATTCTTCTAAGGATCTA+TGG + chr8_1:62755957-62755976 Msa1206030:CDS 35.0%
GAATGAACAAGTGCTTCATT+TGG - chr8_1:62756445-62756464 None:intergenic 35.0%
ATTCAGCTGAGACAATCTTA+GGG + chr8_1:62756461-62756480 Msa1206030:CDS 35.0%
ACAATTGGAAATCCATGTGT+TGG + chr8_1:62756493-62756512 Msa1206030:CDS 35.0%
!! ATTTTGTTTCCACCAACACA+TGG - chr8_1:62756508-62756527 None:intergenic 35.0%
AAACCAGGAAACTTAGGTAA+AGG - chr8_1:62756574-62756593 None:intergenic 35.0%
!! TCCTGGTTTGTTTATCTTCA+TGG + chr8_1:62756585-62756604 Msa1206030:CDS 35.0%
!! TGGTTTGTTTATCTTCATGG+CGG + chr8_1:62756588-62756607 Msa1206030:CDS 35.0%
CTTGAATCTCTTAACTCACT+TGG - chr8_1:62756625-62756644 None:intergenic 35.0%
TCATGTCCATCAACAATCAA+AGG - chr8_1:62756661-62756680 None:intergenic 35.0%
GAAGATCAAGCACTTCAATA+TGG + chr8_1:62756679-62756698 Msa1206030:CDS 35.0%
TGCCAATAGATAGAAACTCT+TGG - chr8_1:62756724-62756743 None:intergenic 35.0%
TATTGTTGAGTAGTCAACCA+TGG - chr8_1:62754397-62754416 None:intergenic 35.0%
ATAGGAGAGAATGAATGAGT+TGG - chr8_1:62754423-62754442 None:intergenic 35.0%
ATTCTCTCCTATAAAGTTCC+AGG + chr8_1:62754431-62754450 Msa1206030:CDS 35.0%
TGTAGAGCTTGAGAAAAATG+AGG + chr8_1:62754563-62754582 Msa1206030:intron 35.0%
AGGATGAATGATATTGAAGG+AGG - chr8_1:62754728-62754747 None:intergenic 35.0%
AGGAGGATGAATGATATTGA+AGG - chr8_1:62754731-62754750 None:intergenic 35.0%
!! TTTCAACTTGTTGGAGTTGA+TGG - chr8_1:62754771-62754790 None:intergenic 35.0%
! TCAACTCCAACAAGTTGAAA+AGG + chr8_1:62754771-62754790 Msa1206030:CDS 35.0%
! AGTTCTCCTTTTCAACTTGT+TGG - chr8_1:62754780-62754799 None:intergenic 35.0%
AAGCAAGTCAATAACACCAT+TGG + chr8_1:62754837-62754856 Msa1206030:CDS 35.0%
!! ACCATTGGTTGATGAATTCT+TGG + chr8_1:62754852-62754871 Msa1206030:CDS 35.0%
TCCAAGAATTCATCAACCAA+TGG - chr8_1:62754856-62754875 None:intergenic 35.0%
AGTTATAATTACTGCTACCC+TGG + chr8_1:62754964-62754983 Msa1206030:CDS 35.0%
GTTATAATTACTGCTACCCT+GGG + chr8_1:62754965-62754984 Msa1206030:CDS 35.0%
AGAATTTGGTTGGATACTGA+TGG + chr8_1:62754988-62755007 Msa1206030:CDS 35.0%
!! GTCCTTTGTTATTATGAGCA+AGG - chr8_1:62755107-62755126 None:intergenic 35.0%
TATAAACTCCTACAACCAAC+TGG - chr8_1:62755456-62755475 None:intergenic 35.0%
AGACATTGGAATTGCTCAAT+TGG - chr8_1:62755677-62755696 None:intergenic 35.0%
TAGTTCAGAACTCAAGACAT+TGG - chr8_1:62755691-62755710 None:intergenic 35.0%
!! TCAATTGATAATGGTGGTGA+TGG - chr8_1:62755722-62755741 None:intergenic 35.0%
! AGTTGGTTGCTATTCTTCTA+AGG + chr8_1:62755949-62755968 Msa1206030:CDS 35.0%
! GCTATTCTTCTAAGGATCTA+TGG + chr8_1:62755957-62755976 Msa1206030:CDS 35.0%
GAATGAACAAGTGCTTCATT+TGG - chr8_1:62756445-62756464 None:intergenic 35.0%
ATTCAGCTGAGACAATCTTA+GGG + chr8_1:62756461-62756480 Msa1206030:CDS 35.0%
ACAATTGGAAATCCATGTGT+TGG + chr8_1:62756493-62756512 Msa1206030:CDS 35.0%
!! ATTTTGTTTCCACCAACACA+TGG - chr8_1:62756508-62756527 None:intergenic 35.0%
AAACCAGGAAACTTAGGTAA+AGG - chr8_1:62756574-62756593 None:intergenic 35.0%
!! TCCTGGTTTGTTTATCTTCA+TGG + chr8_1:62756585-62756604 Msa1206030:CDS 35.0%
!! TGGTTTGTTTATCTTCATGG+CGG + chr8_1:62756588-62756607 Msa1206030:CDS 35.0%
CTTGAATCTCTTAACTCACT+TGG - chr8_1:62756625-62756644 None:intergenic 35.0%
TCATGTCCATCAACAATCAA+AGG - chr8_1:62756661-62756680 None:intergenic 35.0%
GAAGATCAAGCACTTCAATA+TGG + chr8_1:62756679-62756698 Msa1206030:CDS 35.0%
TGCCAATAGATAGAAACTCT+TGG - chr8_1:62756724-62756743 None:intergenic 35.0%
CATGGTTGCAATTTGGATTG+CGG - chr8_1:62754379-62754398 None:intergenic 40.0%
AGTCAACCATGGTTGCAATT+TGG - chr8_1:62754386-62754405 None:intergenic 40.0%
ACACTCACCTGGAACTTTAT+AGG - chr8_1:62754441-62754460 None:intergenic 40.0%
AAATGAGAAGGAAGAGAAGG+AGG - chr8_1:62754748-62754767 None:intergenic 40.0%
TGGAAATGAGAAGGAAGAGA+AGG - chr8_1:62754751-62754770 None:intergenic 40.0%
!! TGGAGTTGATGGAAATGAGA+AGG - chr8_1:62754760-62754779 None:intergenic 40.0%
!! TGACCTCTTTTTGTTTGGTG+GGG - chr8_1:62754812-62754831 None:intergenic 40.0%
!! GTGACCTCTTTTTGTTTGGT+GGG - chr8_1:62754813-62754832 None:intergenic 40.0%
! TGAGGTGACCTCTTTTTGTT+TGG - chr8_1:62754817-62754836 None:intergenic 40.0%
!! GGTGTTATTGACTTGCTTTG+AGG - chr8_1:62754835-62754854 None:intergenic 40.0%
CCTTTCCCTATAGTCTTCAT+TGG - chr8_1:62754934-62754953 None:intergenic 40.0%
CCAATGAAGACTATAGGGAA+AGG + chr8_1:62754931-62754950 Msa1206030:CDS 40.0%
TATCCAACCAAATTCTCCCA+GGG - chr8_1:62754984-62755003 None:intergenic 40.0%
GGAAATCCTATTCAAGCTCA+TGG + chr8_1:62755009-62755028 Msa1206030:CDS 40.0%
AATCCTATTCAAGCTCATGG+AGG + chr8_1:62755012-62755031 Msa1206030:CDS 40.0%
ATCCTATTCAAGCTCATGGA+GGG + chr8_1:62755013-62755032 Msa1206030:CDS 40.0%
! AGCTAGCTTGGGGAAAATAA+GGG - chr8_1:62755621-62755640 None:intergenic 40.0%
! TAGCTAGCTTGGGGAAAATA+AGG - chr8_1:62755622-62755641 None:intergenic 40.0%
! ATGTCTAGATAGCTAGCTTG+GGG - chr8_1:62755631-62755650 None:intergenic 40.0%
! CATGTCTAGATAGCTAGCTT+GGG - chr8_1:62755632-62755651 None:intergenic 40.0%
ACATGTCTAGATAGCTAGCT+TGG - chr8_1:62755633-62755652 None:intergenic 40.0%
CTATGGACCTGGAAAAAAGA+AGG + chr8_1:62755974-62755993 Msa1206030:CDS 40.0%
! TTTTGGTCTCTCAAGCACAT+TGG - chr8_1:62756050-62756069 None:intergenic 40.0%
AATTACGCAAAAGCTTCCGT+CGG + chr8_1:62756127-62756146 Msa1206030:CDS 40.0%
! ACCAAGGTATTTGAATGGAC+CGG - chr8_1:62756176-62756195 None:intergenic 40.0%
! TGGCTACCAAGGTATTTGAA+TGG - chr8_1:62756181-62756200 None:intergenic 40.0%
TTTGATATCCATGCGGTCTT+TGG - chr8_1:62756201-62756220 None:intergenic 40.0%
!! CTTTGAAAAGTGTCATGTCC+CGG - chr8_1:62756225-62756244 None:intergenic 40.0%
CCTTTGTGTTTGAACATAGC+CGG - chr8_1:62756382-62756401 None:intergenic 40.0%
CATTCAGCTGAGACAATCTT+AGG + chr8_1:62756460-62756479 Msa1206030:CDS 40.0%
TGAGACAATCTTAGGGACAT+GGG + chr8_1:62756468-62756487 Msa1206030:CDS 40.0%
TTAGGGACATGGGAAACAAT+TGG + chr8_1:62756478-62756497 Msa1206030:CDS 40.0%
ATTGGAAATCCATGTGTTGG+TGG + chr8_1:62756496-62756515 Msa1206030:CDS 40.0%
!!! GTTTCGAGTTTCGACTTTTC+TGG + chr8_1:62756528-62756547 Msa1206030:CDS 40.0%
CTTCCTTTACCTAAGTTTCC+TGG + chr8_1:62756568-62756587 Msa1206030:CDS 40.0%
GCCATGAAGATAAACAAACC+AGG - chr8_1:62756589-62756608 None:intergenic 40.0%
!! TTATCTTCATGGCGGATAGA+TGG + chr8_1:62756596-62756615 Msa1206030:CDS 40.0%
TGGTTGCCTTTGATTGTTGA+TGG + chr8_1:62756652-62756671 Msa1206030:CDS 40.0%
GGCCAAGAGTTTCTATCTAT+TGG + chr8_1:62756719-62756738 Msa1206030:CDS 40.0%
TTGAATGTGTTCCAACCCAA+AGG - chr8_1:62756763-62756782 None:intergenic 40.0%
CATGGTTGCAATTTGGATTG+CGG - chr8_1:62754379-62754398 None:intergenic 40.0%
AGTCAACCATGGTTGCAATT+TGG - chr8_1:62754386-62754405 None:intergenic 40.0%
ACACTCACCTGGAACTTTAT+AGG - chr8_1:62754441-62754460 None:intergenic 40.0%
AAATGAGAAGGAAGAGAAGG+AGG - chr8_1:62754748-62754767 None:intergenic 40.0%
TGGAAATGAGAAGGAAGAGA+AGG - chr8_1:62754751-62754770 None:intergenic 40.0%
!! TGGAGTTGATGGAAATGAGA+AGG - chr8_1:62754760-62754779 None:intergenic 40.0%
!! TGACCTCTTTTTGTTTGGTG+GGG - chr8_1:62754812-62754831 None:intergenic 40.0%
!! GTGACCTCTTTTTGTTTGGT+GGG - chr8_1:62754813-62754832 None:intergenic 40.0%
! TGAGGTGACCTCTTTTTGTT+TGG - chr8_1:62754817-62754836 None:intergenic 40.0%
!! GGTGTTATTGACTTGCTTTG+AGG - chr8_1:62754835-62754854 None:intergenic 40.0%
CCTTTCCCTATAGTCTTCAT+TGG - chr8_1:62754934-62754953 None:intergenic 40.0%
CCAATGAAGACTATAGGGAA+AGG + chr8_1:62754931-62754950 Msa1206030:CDS 40.0%
TATCCAACCAAATTCTCCCA+GGG - chr8_1:62754984-62755003 None:intergenic 40.0%
GGAAATCCTATTCAAGCTCA+TGG + chr8_1:62755009-62755028 Msa1206030:CDS 40.0%
AATCCTATTCAAGCTCATGG+AGG + chr8_1:62755012-62755031 Msa1206030:CDS 40.0%
ATCCTATTCAAGCTCATGGA+GGG + chr8_1:62755013-62755032 Msa1206030:CDS 40.0%
! AGCTAGCTTGGGGAAAATAA+GGG - chr8_1:62755621-62755640 None:intergenic 40.0%
! TAGCTAGCTTGGGGAAAATA+AGG - chr8_1:62755622-62755641 None:intergenic 40.0%
! ATGTCTAGATAGCTAGCTTG+GGG - chr8_1:62755631-62755650 None:intergenic 40.0%
! CATGTCTAGATAGCTAGCTT+GGG - chr8_1:62755632-62755651 None:intergenic 40.0%
ACATGTCTAGATAGCTAGCT+TGG - chr8_1:62755633-62755652 None:intergenic 40.0%
CTATGGACCTGGAAAAAAGA+AGG + chr8_1:62755974-62755993 Msa1206030:CDS 40.0%
! TTTTGGTCTCTCAAGCACAT+TGG - chr8_1:62756050-62756069 None:intergenic 40.0%
AATTACGCAAAAGCTTCCGT+CGG + chr8_1:62756127-62756146 Msa1206030:CDS 40.0%
! ACCAAGGTATTTGAATGGAC+CGG - chr8_1:62756176-62756195 None:intergenic 40.0%
! TGGCTACCAAGGTATTTGAA+TGG - chr8_1:62756181-62756200 None:intergenic 40.0%
TTTGATATCCATGCGGTCTT+TGG - chr8_1:62756201-62756220 None:intergenic 40.0%
!! CTTTGAAAAGTGTCATGTCC+CGG - chr8_1:62756225-62756244 None:intergenic 40.0%
CCTTTGTGTTTGAACATAGC+CGG - chr8_1:62756382-62756401 None:intergenic 40.0%
CATTCAGCTGAGACAATCTT+AGG + chr8_1:62756460-62756479 Msa1206030:CDS 40.0%
TGAGACAATCTTAGGGACAT+GGG + chr8_1:62756468-62756487 Msa1206030:CDS 40.0%
TTAGGGACATGGGAAACAAT+TGG + chr8_1:62756478-62756497 Msa1206030:CDS 40.0%
ATTGGAAATCCATGTGTTGG+TGG + chr8_1:62756496-62756515 Msa1206030:CDS 40.0%
!!! GTTTCGAGTTTCGACTTTTC+TGG + chr8_1:62756528-62756547 Msa1206030:CDS 40.0%
CTTCCTTTACCTAAGTTTCC+TGG + chr8_1:62756568-62756587 Msa1206030:CDS 40.0%
GCCATGAAGATAAACAAACC+AGG - chr8_1:62756589-62756608 None:intergenic 40.0%
!! TTATCTTCATGGCGGATAGA+TGG + chr8_1:62756596-62756615 Msa1206030:CDS 40.0%
TGGTTGCCTTTGATTGTTGA+TGG + chr8_1:62756652-62756671 Msa1206030:CDS 40.0%
GGCCAAGAGTTTCTATCTAT+TGG + chr8_1:62756719-62756738 Msa1206030:CDS 40.0%
TTGAATGTGTTCCAACCCAA+AGG - chr8_1:62756763-62756782 None:intergenic 40.0%
CGCAATCCAAATTGCAACCA+TGG + chr8_1:62754377-62754396 Msa1206030:exon 45.0%
CATTAGAAGACACACTCACC+TGG - chr8_1:62754452-62754471 None:intergenic 45.0%
! ACGAATTTTCGTTGCAACGC+TGG + chr8_1:62754613-62754632 Msa1206030:CDS 45.0%
! AATTTTCGTTGCAACGCTGG+AGG + chr8_1:62754616-62754635 Msa1206030:CDS 45.0%
!! TTTTGTTTGGTGGGGGGATT+TGG - chr8_1:62754804-62754823 None:intergenic 45.0%
!! ACCTCTTTTTGTTTGGTGGG+GGG - chr8_1:62754810-62754829 None:intergenic 45.0%
!! GACCTCTTTTTGTTTGGTGG+GGG - chr8_1:62754811-62754830 None:intergenic 45.0%
!! GGTGACCTCTTTTTGTTTGG+TGG - chr8_1:62754814-62754833 None:intergenic 45.0%
GTATCCAACCAAATTCTCCC+AGG - chr8_1:62754985-62755004 None:intergenic 45.0%
TGAAAGTGACTTACACGAGC+AGG - chr8_1:62755129-62755148 None:intergenic 45.0%
AGACTATCTGAGAGAGCTCA+TGG + chr8_1:62755243-62755262 Msa1206030:intron 45.0%
AACTCCTACAACCAACTGGT+AGG - chr8_1:62755452-62755471 None:intergenic 45.0%
TCTCACAATGTCTCTCCATC+AGG + chr8_1:62755913-62755932 Msa1206030:intron 45.0%
CTCCATCAGGTGGACATTAT+AGG + chr8_1:62755926-62755945 Msa1206030:intron 45.0%
CTCCTATAATGTCCACCTGA+TGG - chr8_1:62755931-62755950 None:intergenic 45.0%
CAGGTGGACATTATAGGAGT+TGG + chr8_1:62755932-62755951 Msa1206030:intron 45.0%
! CTTCTAAGGATCTATGGACC+TGG + chr8_1:62755963-62755982 Msa1206030:CDS 45.0%
! GACGGAAGCTTTTGCGTAAT+TGG - chr8_1:62756128-62756147 None:intergenic 45.0%
ATCACTGAATGCTATGCCGA+CGG - chr8_1:62756146-62756165 None:intergenic 45.0%
GCATTCAGTGATACTCCTAC+CGG + chr8_1:62756154-62756173 Msa1206030:CDS 45.0%
AGGTATTTGAATGGACCGGT+AGG - chr8_1:62756172-62756191 None:intergenic 45.0%
ACCGGTCCATTCAAATACCT+TGG + chr8_1:62756172-62756191 Msa1206030:CDS 45.0%
CCGGCTATGTTCAAACACAA+AGG + chr8_1:62756379-62756398 Msa1206030:CDS 45.0%
! ATGGTTACATCAGGTTGCAC+TGG + chr8_1:62756412-62756431 Msa1206030:CDS 45.0%
! TTACATCAGGTTGCACTGGA+TGG + chr8_1:62756416-62756435 Msa1206030:CDS 45.0%
! TACATCAGGTTGCACTGGAT+GGG + chr8_1:62756417-62756436 Msa1206030:CDS 45.0%
CTGAGACAATCTTAGGGACA+TGG + chr8_1:62756467-62756486 Msa1206030:CDS 45.0%
AATGGAAACTGCCTTTGGGT+TGG + chr8_1:62756749-62756768 Msa1206030:CDS 45.0%
CGCAATCCAAATTGCAACCA+TGG + chr8_1:62754377-62754396 Msa1206030:exon 45.0%
CATTAGAAGACACACTCACC+TGG - chr8_1:62754452-62754471 None:intergenic 45.0%
! ACGAATTTTCGTTGCAACGC+TGG + chr8_1:62754613-62754632 Msa1206030:CDS 45.0%
! AATTTTCGTTGCAACGCTGG+AGG + chr8_1:62754616-62754635 Msa1206030:CDS 45.0%
!! TTTTGTTTGGTGGGGGGATT+TGG - chr8_1:62754804-62754823 None:intergenic 45.0%
!! ACCTCTTTTTGTTTGGTGGG+GGG - chr8_1:62754810-62754829 None:intergenic 45.0%
!! GACCTCTTTTTGTTTGGTGG+GGG - chr8_1:62754811-62754830 None:intergenic 45.0%
!! GGTGACCTCTTTTTGTTTGG+TGG - chr8_1:62754814-62754833 None:intergenic 45.0%
GTATCCAACCAAATTCTCCC+AGG - chr8_1:62754985-62755004 None:intergenic 45.0%
TGAAAGTGACTTACACGAGC+AGG - chr8_1:62755129-62755148 None:intergenic 45.0%
AGACTATCTGAGAGAGCTCA+TGG + chr8_1:62755243-62755262 Msa1206030:intron 45.0%
AACTCCTACAACCAACTGGT+AGG - chr8_1:62755452-62755471 None:intergenic 45.0%
TCTCACAATGTCTCTCCATC+AGG + chr8_1:62755913-62755932 Msa1206030:intron 45.0%
CTCCATCAGGTGGACATTAT+AGG + chr8_1:62755926-62755945 Msa1206030:intron 45.0%
CTCCTATAATGTCCACCTGA+TGG - chr8_1:62755931-62755950 None:intergenic 45.0%
CAGGTGGACATTATAGGAGT+TGG + chr8_1:62755932-62755951 Msa1206030:intron 45.0%
! CTTCTAAGGATCTATGGACC+TGG + chr8_1:62755963-62755982 Msa1206030:CDS 45.0%
! GACGGAAGCTTTTGCGTAAT+TGG - chr8_1:62756128-62756147 None:intergenic 45.0%
ATCACTGAATGCTATGCCGA+CGG - chr8_1:62756146-62756165 None:intergenic 45.0%
GCATTCAGTGATACTCCTAC+CGG + chr8_1:62756154-62756173 Msa1206030:CDS 45.0%
AGGTATTTGAATGGACCGGT+AGG - chr8_1:62756172-62756191 None:intergenic 45.0%
ACCGGTCCATTCAAATACCT+TGG + chr8_1:62756172-62756191 Msa1206030:CDS 45.0%
CCGGCTATGTTCAAACACAA+AGG + chr8_1:62756379-62756398 Msa1206030:CDS 45.0%
! ATGGTTACATCAGGTTGCAC+TGG + chr8_1:62756412-62756431 Msa1206030:CDS 45.0%
! TTACATCAGGTTGCACTGGA+TGG + chr8_1:62756416-62756435 Msa1206030:CDS 45.0%
! TACATCAGGTTGCACTGGAT+GGG + chr8_1:62756417-62756436 Msa1206030:CDS 45.0%
CTGAGACAATCTTAGGGACA+TGG + chr8_1:62756467-62756486 Msa1206030:CDS 45.0%
AATGGAAACTGCCTTTGGGT+TGG + chr8_1:62756749-62756768 Msa1206030:CDS 45.0%
! ATTGCGGATTGATCTGCCCT+CGG - chr8_1:62754363-62754382 None:intergenic 50.0%
TCCCCCCACCAAACAAAAAG+AGG + chr8_1:62754806-62754825 Msa1206030:CDS 50.0%
ACTGCTACCCTGGGAGAATT+TGG + chr8_1:62754974-62754993 Msa1206030:CDS 50.0%
CTACCCTGGGAGAATTTGGT+TGG + chr8_1:62754978-62754997 Msa1206030:CDS 50.0%
CACCCTCCATGAGCTTGAAT+AGG - chr8_1:62755018-62755037 None:intergenic 50.0%
GCATCCTACCAGTTGGTTGT+AGG + chr8_1:62755445-62755464 Msa1206030:intron 50.0%
CACAATGTCTCTCCATCAGG+TGG + chr8_1:62755916-62755935 Msa1206030:intron 50.0%
GACCGCATGGATATCAAAGC+CGG + chr8_1:62756203-62756222 Msa1206030:CDS 50.0%
ACCGCATGGATATCAAAGCC+GGG + chr8_1:62756204-62756223 Msa1206030:CDS 50.0%
! TCCCGGCTTTGATATCCATG+CGG - chr8_1:62756208-62756227 None:intergenic 50.0%
! ATTGCGGATTGATCTGCCCT+CGG - chr8_1:62754363-62754382 None:intergenic 50.0%
TCCCCCCACCAAACAAAAAG+AGG + chr8_1:62754806-62754825 Msa1206030:CDS 50.0%
ACTGCTACCCTGGGAGAATT+TGG + chr8_1:62754974-62754993 Msa1206030:CDS 50.0%
CTACCCTGGGAGAATTTGGT+TGG + chr8_1:62754978-62754997 Msa1206030:CDS 50.0%
CACCCTCCATGAGCTTGAAT+AGG - chr8_1:62755018-62755037 None:intergenic 50.0%
GCATCCTACCAGTTGGTTGT+AGG + chr8_1:62755445-62755464 Msa1206030:intron 50.0%
CACAATGTCTCTCCATCAGG+TGG + chr8_1:62755916-62755935 Msa1206030:intron 50.0%
GACCGCATGGATATCAAAGC+CGG + chr8_1:62756203-62756222 Msa1206030:CDS 50.0%
ACCGCATGGATATCAAAGCC+GGG + chr8_1:62756204-62756223 Msa1206030:CDS 50.0%
! TCCCGGCTTTGATATCCATG+CGG - chr8_1:62756208-62756227 None:intergenic 50.0%
GGGCTAAGCATCCTACCAGT+TGG + chr8_1:62755438-62755457 Msa1206030:intron 55.0%
CATGCGGTCTTTGGCTACCA+AGG - chr8_1:62756192-62756211 None:intergenic 55.0%
! CTTGGTAGCCAAAGACCGCA+TGG + chr8_1:62756190-62756209 Msa1206030:CDS 55.0%
GGGCTAAGCATCCTACCAGT+TGG + chr8_1:62755438-62755457 Msa1206030:intron 55.0%
CATGCGGTCTTTGGCTACCA+AGG - chr8_1:62756192-62756211 None:intergenic 55.0%
! CTTGGTAGCCAAAGACCGCA+TGG + chr8_1:62756190-62756209 Msa1206030:CDS 55.0%
! CGGTCAGCGAAGAGAAGCGC+CGG + chr8_1:62756360-62756379 Msa1206030:CDS 65.0%
! CGGTCAGCGAAGAGAAGCGC+CGG + chr8_1:62756360-62756379 Msa1206030:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 62754360 62756786 62754360 ID=Msa1206030;Name=Msa1206030
chr8_1 mRNA 62754360 62756786 62754360 ID=Msa1206030-mRNA-1;Parent=Msa1206030;Name=Msa1206030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=36|1|0.66|1|1|0.66|3|0|491
chr8_1 exon 62754360 62754452 62754360 ID=Msa1206030-mRNA-1:exon:20319;Parent=Msa1206030-mRNA-1
chr8_1 exon 62754568 62755134 62754568 ID=Msa1206030-mRNA-1:exon:20320;Parent=Msa1206030-mRNA-1
chr8_1 exon 62755935 62756786 62755935 ID=Msa1206030-mRNA-1:exon:20321;Parent=Msa1206030-mRNA-1
chr8_1 five_prime_UTR 62754360 62754395 62754360 ID=Msa1206030-mRNA-1:five_prime_utr;Parent=Msa1206030-mRNA-1
chr8_1 CDS 62754396 62754452 62754396 ID=Msa1206030-mRNA-1:cds;Parent=Msa1206030-mRNA-1
chr8_1 CDS 62754568 62755134 62754568 ID=Msa1206030-mRNA-1:cds;Parent=Msa1206030-mRNA-1
chr8_1 CDS 62755935 62756786 62755935 ID=Msa1206030-mRNA-1:cds;Parent=Msa1206030-mRNA-1
Gene Sequence

>Msa1206030

ATGGTTGACTACTCAACAATAACACCAACTCATTCATTCTCTCCTATAAAGTTCCAGAGCTTGAGAAAAATGAGGATGAAGAATCTATACAAGAAACCAATTACGAATTTTCGTTGCAACGCTGGAGGTAGATATTGTTCTATGTCACTAGTAATAATATGGGGTTTATTAATCTTAGGATGCATATTTTTACTTCATCTATATTCTAATAACACCTCCTTCAATATCATTCATCCTCCTTCTCTTCCTTCTCATTTCCATCAACTCCAACAAGTTGAAAAGGAGAACTTCCAAATCCCCCCACCAAACAAAAAGAGGTCACCTCAAAGCAAGTCAATAACACCATTGGTTGATGAATTCTTGGATCAAGATTCATCACTTAGACATGTTTTCTTTCCTCATAAAACAAGTGCTATTGATCCAATGAAGACTATAGGGAAAGGAAATAATGATAGTTATAATTACTGCTACCCTGGGAGAATTTGGTTGGATACTGATGGAAATCCTATTCAAGCTCATGGAGGGTGCATTCTATTTGATGAAATTTCAAATACTTATTATTGGTATGGTGAATATAAAGATGGCCCTACTTACCTTGCTCATAATAACAAAGGACCTGCTCGTGTGGACATTATAGGAGTTGGTTGCTATTCTTCTAAGGATCTATGGACCTGGAAAAAAGAAGGTATTGTACTAGCAGCAGAGAAAACAGATAAAACACATGATCTGCACAAGTCCAATGTGCTTGAGAGACCAAAAGTTATTTACAATGAGAAAACAAGAAAGTATGTGATGTGGATGCATATCGACAACGCCAATTACGCAAAAGCTTCCGTCGGCATAGCATTCAGTGATACTCCTACCGGTCCATTCAAATACCTTGGTAGCCAAAGACCGCATGGATATCAAAGCCGGGACATGACACTTTTCAAAGATGAAGACAATGTTGCATATCTAATATACTCATCTGAAGAAAACAATGTAATGCACATTGGACCCTTGACTGAAGATTATCTCAATGTGACATCTGTCATGAAAAGAATTTTCGTCGGTCAGCGAAGAGAAGCGCCGGCTATGTTCAAACACAAAGGAACATATTACATGGTTACATCAGGTTGCACTGGATGGGCACCAAATGAAGCACTTGTTCATTCAGCTGAGACAATCTTAGGGACATGGGAAACAATTGGAAATCCATGTGTTGGTGGAAACAAAATGTTTCGAGTTTCGACTTTTCTGGCACAAAGTACTTTTGTGCTTCCTTTACCTAAGTTTCCTGGTTTGTTTATCTTCATGGCGGATAGATGGAATCCAAGTGAGTTAAGAGATTCAAGATATGTTTGGTTGCCTTTGATTGTTGATGGACATGAAGATCAAGCACTTCAATATGGTTTTGATAACACATTTTGGCCAAGAGTTTCTATCTATTGGCATAAAAAATGGAAACTGCCTTTGGGTTGGAACACATTCAAATGA

Protein sequence

>Msa1206030

MVDYSTITPTHSFSPIKFQSLRKMRMKNLYKKPITNFRCNAGGRYCSMSLVIIWGLLILGCIFLLHLYSNNTSFNIIHPPSLPSHFHQLQQVEKENFQIPPPNKKRSPQSKSITPLVDEFLDQDSSLRHVFFPHKTSAIDPMKTIGKGNNDSYNYCYPGRIWLDTDGNPIQAHGGCILFDEISNTYYWYGEYKDGPTYLAHNNKGPARVDIIGVGCYSSKDLWTWKKEGIVLAAEKTDKTHDLHKSNVLERPKVIYNEKTRKYVMWMHIDNANYAKASVGIAFSDTPTGPFKYLGSQRPHGYQSRDMTLFKDEDNVAYLIYSSEENNVMHIGPLTEDYLNVTSVMKRIFVGQRREAPAMFKHKGTYYMVTSGCTGWAPNEALVHSAETILGTWETIGNPCVGGNKMFRVSTFLAQSTFVLPLPKFPGLFIFMADRWNPSELRDSRYVWLPLIVDGHEDQALQYGFDNTFWPRVSIYWHKKWKLPLGWNTFK*