Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238250 | XP_013462769.1 | 98.688 | 381 | 5 | 0 | 1 | 381 | 1 | 381 | 0.0 | 768 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238250 | sp|Q4TU14|RHF1A_ARATH | 44.134 | 358 | 141 | 10 | 30 | 358 | 38 | 365 | 2.41e-72 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238250 | A0A072V4R5 | 98.688 | 381 | 5 | 0 | 1 | 381 | 1 | 381 | 0.0 | 768 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0238250 | 0.806511 | 7.939736e-50 | -8.615850e-47 |
| Msa0013050 | Msa0238250 | 0.881334 | 2.616857e-70 | -8.615850e-47 |
| Msa0027540 | Msa0238250 | -0.814665 | 1.372613e-51 | -8.615850e-47 |
| Msa0030380 | Msa0238250 | -0.849708 | 2.717944e-60 | -8.615850e-47 |
| Msa0032610 | Msa0238250 | -0.811997 | 5.290689e-51 | -8.615850e-47 |
| Msa0043940 | Msa0238250 | -0.801483 | 8.816568e-49 | -8.615850e-47 |
| Msa0044710 | Msa0238250 | -0.848133 | 7.440271e-60 | -8.615850e-47 |
| Msa0046660 | Msa0238250 | 0.814235 | 1.708159e-51 | -8.615850e-47 |
| Msa0050720 | Msa0238250 | -0.842182 | 3.022919e-58 | -8.615850e-47 |
| Msa0050770 | Msa0238250 | -0.820000 | 8.642949e-53 | -8.615850e-47 |
| Msa0067150 | Msa0238250 | -0.801328 | 9.483483e-49 | -8.615850e-47 |
| Msa0074950 | Msa0238250 | 0.814181 | 1.755852e-51 | -8.615850e-47 |
| Msa0075310 | Msa0238250 | -0.815974 | 7.020048e-52 | -8.615850e-47 |
| Msa0085360 | Msa0238250 | 0.840378 | 9.016746e-58 | -8.615850e-47 |
| Msa0094730 | Msa0238250 | 0.815292 | 9.963072e-52 | -8.615850e-47 |
| Msa0095010 | Msa0238250 | -0.809002 | 2.347023e-50 | -8.615850e-47 |
| Msa0095380 | Msa0238250 | -0.808085 | 3.683733e-50 | -8.615850e-47 |
| Msa0119850 | Msa0238250 | -0.830453 | 2.912130e-55 | -8.615850e-47 |
| Msa0142420 | Msa0238250 | -0.816127 | 6.490612e-52 | -8.615850e-47 |
| Msa0143080 | Msa0238250 | -0.807249 | 5.544320e-50 | -8.615850e-47 |
| Msa0143140 | Msa0238250 | 0.818073 | 2.371219e-52 | -8.615850e-47 |
| Msa0148120 | Msa0238250 | -0.803910 | 2.781629e-49 | -8.615850e-47 |
| Msa0156650 | Msa0238250 | 0.823407 | 1.408779e-53 | -8.615850e-47 |
| Msa0162770 | Msa0238250 | 0.839907 | 1.196699e-57 | -8.615850e-47 |
| Msa0168100 | Msa0238250 | -0.830089 | 3.573254e-55 | -8.615850e-47 |
| Msa0168640 | Msa0238250 | 0.854673 | 1.052769e-61 | -8.615850e-47 |
| Msa0169140 | Msa0238250 | 0.832272 | 1.039243e-55 | -8.615850e-47 |
| Msa0173740 | Msa0238250 | -0.854637 | 1.078058e-61 | -8.615850e-47 |
| Msa0173820 | Msa0238250 | -0.855211 | 7.344098e-62 | -8.615850e-47 |
| Msa0173830 | Msa0238250 | -0.837593 | 4.743556e-57 | -8.615850e-47 |
| Msa0177700 | Msa0238250 | 0.805974 | 1.029954e-49 | -8.615850e-47 |
| Msa0182930 | Msa0238250 | -0.828029 | 1.127872e-54 | -8.615850e-47 |
| Msa0183620 | Msa0238250 | -0.801636 | 8.202398e-49 | -8.615850e-47 |
| Msa0187070 | Msa0238250 | -0.822361 | 2.468887e-53 | -8.615850e-47 |
| Msa0188680 | Msa0238250 | 0.816777 | 4.643284e-52 | -8.615850e-47 |
| Msa0196130 | Msa0238250 | 0.822876 | 1.873142e-53 | -8.615850e-47 |
| Msa0196360 | Msa0238250 | 0.898978 | 3.122319e-77 | -8.615850e-47 |
| Msa0197940 | Msa0238250 | 0.834811 | 2.415839e-56 | -8.615850e-47 |
| Msa0200010 | Msa0238250 | -0.821747 | 3.426240e-53 | -8.615850e-47 |
| Msa0200950 | Msa0238250 | 0.856322 | 3.478486e-62 | -8.615850e-47 |
| Msa0229490 | Msa0238250 | 0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0236980 | Msa0238250 | -0.809557 | 1.783938e-50 | -8.615850e-47 |
| Msa0238070 | Msa0238250 | 0.833773 | 4.398436e-56 | -8.615850e-47 |
| Msa0238250 | Msa0244270 | -0.832212 | 1.075198e-55 | -8.615850e-47 |
| Msa0238250 | Msa0257240 | 0.803678 | 3.107966e-49 | -8.615850e-47 |
| Msa0238250 | Msa0258670 | 0.849961 | 2.310296e-60 | -8.615850e-47 |
| Msa0238250 | Msa0259860 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0238250 | Msa0260950 | 0.842263 | 2.877084e-58 | -8.615850e-47 |
| Msa0238250 | Msa0270220 | 0.819474 | 1.139363e-52 | -8.615850e-47 |
| Msa0238250 | Msa0272480 | 0.842067 | 3.243050e-58 | -8.615850e-47 |
| Msa0238250 | Msa0275030 | -0.805934 | 1.050437e-49 | -8.615850e-47 |
| Msa0238250 | Msa0275680 | 0.952316 | 3.151339e-110 | -8.615850e-47 |
| Msa0238250 | Msa0279790 | -0.806310 | 8.752459e-50 | -8.615850e-47 |
| Msa0238250 | Msa0280490 | -0.809830 | 1.558607e-50 | -8.615850e-47 |
| Msa0238250 | Msa0280730 | -0.814452 | 1.529858e-51 | -8.615850e-47 |
| Msa0238250 | Msa0288240 | -0.819230 | 1.295219e-52 | -8.615850e-47 |
| Msa0238250 | Msa0288330 | -0.829569 | 4.783619e-55 | -8.615850e-47 |
| Msa0238250 | Msa0294560 | 0.826832 | 2.184518e-54 | -8.615850e-47 |
| Msa0238250 | Msa0298830 | -0.802832 | 4.651984e-49 | -8.615850e-47 |
| Msa0238250 | Msa0304920 | -0.821124 | 4.769281e-53 | -8.615850e-47 |
| Msa0238250 | Msa0307830 | 0.813074 | 3.076859e-51 | -8.615850e-47 |
| Msa0238250 | Msa0312690 | 0.833726 | 4.517990e-56 | -8.615850e-47 |
| Msa0238250 | Msa0315930 | 0.921807 | 2.226794e-88 | -8.615850e-47 |
| Msa0238250 | Msa0318250 | -0.820166 | 7.919260e-53 | -8.615850e-47 |
| Msa0238250 | Msa0318270 | -0.802113 | 6.544888e-49 | -8.615850e-47 |
| Msa0238250 | Msa0326670 | -0.843893 | 1.058881e-58 | -8.615850e-47 |
| Msa0238250 | Msa0344830 | -0.808275 | 3.354609e-50 | -8.615850e-47 |
| Msa0238250 | Msa0358170 | -0.863228 | 2.891491e-64 | -8.615850e-47 |
| Msa0238250 | Msa0369220 | -0.800807 | 1.212039e-48 | -8.615850e-47 |
| Msa0238250 | Msa0376510 | -0.819892 | 9.148023e-53 | -8.615850e-47 |
| Msa0238250 | Msa0378080 | -0.851208 | 1.030920e-60 | -8.615850e-47 |
| Msa0238250 | Msa0379410 | -0.805445 | 1.330116e-49 | -8.615850e-47 |
| Msa0238250 | Msa0380040 | -0.840837 | 6.834196e-58 | -8.615850e-47 |
| Msa0238250 | Msa0388050 | -0.813175 | 2.923899e-51 | -8.615850e-47 |
| Msa0238250 | Msa0395960 | -0.809254 | 2.072607e-50 | -8.615850e-47 |
| Msa0238250 | Msa0398950 | -0.801700 | 7.957732e-49 | -8.615850e-47 |
| Msa0238250 | Msa0399340 | -0.804317 | 2.289786e-49 | -8.615850e-47 |
| Msa0238250 | Msa0414950 | 0.806442 | 8.211390e-50 | -8.615850e-47 |
| Msa0238250 | Msa0416890 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa0238250 | Msa0421780 | 0.849424 | 3.262013e-60 | -8.615850e-47 |
| Msa0238250 | Msa0423360 | 0.804586 | 2.011558e-49 | -8.615850e-47 |
| Msa0238250 | Msa0425050 | -0.814910 | 1.211371e-51 | -8.615850e-47 |
| Msa0238250 | Msa0429290 | -0.848201 | 7.125274e-60 | -8.615850e-47 |
| Msa0238250 | Msa0430620 | -0.801857 | 7.386641e-49 | -8.615850e-47 |
| Msa0238250 | Msa0436280 | 0.803987 | 2.681533e-49 | -8.615850e-47 |
| Msa0238250 | Msa0440130 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa0238250 | Msa0442850 | -0.803728 | 3.035178e-49 | -8.615850e-47 |
| Msa0238250 | Msa0462590 | -0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa0238250 | Msa0465790 | -0.860857 | 1.541128e-63 | -8.615850e-47 |
| Msa0238250 | Msa0467900 | 0.814695 | 1.351618e-51 | -8.615850e-47 |
| Msa0238250 | Msa0467960 | 0.823665 | 1.225873e-53 | -8.615850e-47 |
| Msa0238250 | Msa0468130 | -0.801815 | 7.535068e-49 | -8.615850e-47 |
| Msa0238250 | Msa0468160 | -0.833969 | 3.930191e-56 | -8.615850e-47 |
| Msa0238250 | Msa0469910 | 0.807167 | 5.769124e-50 | -8.615850e-47 |
| Msa0238250 | Msa0470180 | -0.845111 | 4.979443e-59 | -8.615850e-47 |
| Msa0238250 | Msa0472740 | -0.807444 | 5.039451e-50 | -8.615850e-47 |
| Msa0238250 | Msa0475580 | -0.849247 | 3.655484e-60 | -8.615850e-47 |
| Msa0238250 | Msa0504020 | -0.842001 | 3.375807e-58 | -8.615850e-47 |
| Msa0238250 | Msa0509390 | -0.837985 | 3.762786e-57 | -8.615850e-47 |
| Msa0238250 | Msa0518040 | -0.854558 | 1.136373e-61 | -8.615850e-47 |
| Msa0238250 | Msa0519220 | -0.847429 | 1.162726e-59 | -8.615850e-47 |
| Msa0238250 | Msa0520220 | -0.803002 | 4.291152e-49 | -8.615850e-47 |
| Msa0238250 | Msa0526640 | 0.800505 | 1.396912e-48 | -8.615850e-47 |
| Msa0238250 | Msa0531990 | 0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa0238250 | Msa0532100 | 0.812233 | 4.700738e-51 | -8.615850e-47 |
| Msa0238250 | Msa0535030 | -0.820986 | 5.131151e-53 | -8.615850e-47 |
| Msa0238250 | Msa0535060 | -0.821271 | 4.411762e-53 | -8.615850e-47 |
| Msa0238250 | Msa0536650 | -0.814521 | 1.476855e-51 | -8.615850e-47 |
| Msa0238250 | Msa0540070 | -0.806911 | 6.534526e-50 | -8.615850e-47 |
| Msa0238250 | Msa0553220 | 0.877673 | 5.204847e-69 | -8.615850e-47 |
| Msa0238250 | Msa0562300 | 0.812745 | 3.631895e-51 | -8.615850e-47 |
| Msa0238250 | Msa0578070 | 0.821374 | 4.177819e-53 | -8.615850e-47 |
| Msa0238250 | Msa0579290 | -0.814237 | 1.706956e-51 | -8.615850e-47 |
| Msa0238250 | Msa0579390 | -0.816680 | 4.880684e-52 | -8.615850e-47 |
| Msa0238250 | Msa0580420 | -0.811885 | 5.597183e-51 | -8.615850e-47 |
| Msa0238250 | Msa0583740 | -0.804951 | 1.688364e-49 | -8.615850e-47 |
| Msa0238250 | Msa0585000 | 0.820036 | 8.478771e-53 | -8.615850e-47 |
| Msa0238250 | Msa0590680 | -0.828564 | 8.383319e-55 | -8.615850e-47 |
| Msa0238250 | Msa0591060 | -0.823247 | 1.535119e-53 | -8.615850e-47 |
| Msa0238250 | Msa0591770 | -0.819613 | 1.059671e-52 | -8.615850e-47 |
| Msa0238250 | Msa0605170 | -0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa0238250 | Msa0607200 | -0.816482 | 5.406686e-52 | -8.615850e-47 |
| Msa0238250 | Msa0607340 | 0.856994 | 2.207932e-62 | -8.615850e-47 |
| Msa0238250 | Msa0610430 | -0.806864 | 6.687428e-50 | -8.615850e-47 |
| Msa0238250 | Msa0618010 | -0.837153 | 6.150229e-57 | -8.615850e-47 |
| Msa0238250 | Msa0621120 | -0.841761 | 3.906734e-58 | -8.615850e-47 |
| Msa0238250 | Msa0632870 | -0.813208 | 2.875916e-51 | -8.615850e-47 |
| Msa0238250 | Msa0638280 | -0.839537 | 1.493757e-57 | -8.615850e-47 |
| Msa0238250 | Msa0638320 | -0.833870 | 4.158673e-56 | -8.615850e-47 |
| Msa0238250 | Msa0646640 | -0.818963 | 1.489483e-52 | -8.615850e-47 |
| Msa0238250 | Msa0647450 | 0.855550 | 5.850416e-62 | -8.615850e-47 |
| Msa0238250 | Msa0654760 | 0.801348 | 9.392700e-49 | -8.615850e-47 |
| Msa0238250 | Msa0655660 | 0.800833 | 1.197063e-48 | -8.615850e-47 |
| Msa0238250 | Msa0661190 | 0.809348 | 1.977765e-50 | -8.615850e-47 |
| Msa0238250 | Msa0669850 | -0.821536 | 3.831625e-53 | -8.615850e-47 |
| Msa0238250 | Msa0670270 | -0.803057 | 4.179651e-49 | -8.615850e-47 |
| Msa0238250 | Msa0671740 | -0.824840 | 6.490711e-54 | -8.615850e-47 |
| Msa0238250 | Msa0672120 | -0.809522 | 1.814983e-50 | -8.615850e-47 |
| Msa0238250 | Msa0677270 | -0.833359 | 5.580636e-56 | -8.615850e-47 |
| Msa0238250 | Msa0684180 | 0.829342 | 5.431985e-55 | -8.615850e-47 |
| Msa0238250 | Msa0703590 | -0.805176 | 1.514807e-49 | -8.615850e-47 |
| Msa0238250 | Msa0705420 | -0.827334 | 1.656684e-54 | -8.615850e-47 |
| Msa0238250 | Msa0709190 | -0.805291 | 1.432757e-49 | -8.615850e-47 |
| Msa0238250 | Msa0734660 | -0.838839 | 2.265177e-57 | -8.615850e-47 |
| Msa0238250 | Msa0743260 | -0.814315 | 1.639847e-51 | -8.615850e-47 |
| Msa0238250 | Msa0743650 | -0.806958 | 6.387125e-50 | -8.615850e-47 |
| Msa0238250 | Msa0771720 | -0.815593 | 8.538311e-52 | -8.615850e-47 |
| Msa0238250 | Msa0775260 | -0.800667 | 1.294327e-48 | -8.615850e-47 |
| Msa0238250 | Msa0776220 | -0.821072 | 4.902968e-53 | -8.615850e-47 |
| Msa0238250 | Msa0784860 | -0.843074 | 1.752051e-58 | -8.615850e-47 |
| Msa0238250 | Msa0790390 | 0.825893 | 3.657054e-54 | -8.615850e-47 |
| Msa0238250 | Msa0795090 | -0.816028 | 6.830450e-52 | -8.615850e-47 |
| Msa0238250 | Msa0795920 | -0.803784 | 2.955056e-49 | -8.615850e-47 |
| Msa0238250 | Msa0804120 | -0.822546 | 2.236285e-53 | -8.615850e-47 |
| Msa0238250 | Msa0812570 | -0.800863 | 1.180329e-48 | -8.615850e-47 |
| Msa0238250 | Msa0813670 | -0.827169 | 1.814380e-54 | -8.615850e-47 |
| Msa0238250 | Msa0813720 | -0.850824 | 1.322679e-60 | -8.615850e-47 |
| Msa0238250 | Msa0819030 | 0.801494 | 8.767212e-49 | -8.615850e-47 |
| Msa0238250 | Msa0824680 | -0.804112 | 2.525319e-49 | -8.615850e-47 |
| Msa0238250 | Msa0830990 | -0.800761 | 1.238630e-48 | -8.615850e-47 |
| Msa0238250 | Msa0831580 | -0.812567 | 3.973626e-51 | -8.615850e-47 |
| Msa0238250 | Msa0842210 | -0.831273 | 1.832727e-55 | -8.615850e-47 |
| Msa0238250 | Msa0854120 | -0.830492 | 2.849324e-55 | -8.615850e-47 |
| Msa0238250 | Msa0863770 | -0.811251 | 7.687342e-51 | -8.615850e-47 |
| Msa0238250 | Msa0867050 | 0.832291 | 1.028113e-55 | -8.615850e-47 |
| Msa0238250 | Msa0870150 | -0.863120 | 3.123367e-64 | -8.615850e-47 |
| Msa0238250 | Msa0874500 | -0.810681 | 1.021212e-50 | -8.615850e-47 |
| Msa0238250 | Msa0878980 | 0.805394 | 1.363697e-49 | -8.615850e-47 |
| Msa0238250 | Msa0880220 | -0.809979 | 1.447332e-50 | -8.615850e-47 |
| Msa0238250 | Msa0899240 | 0.805352 | 1.391324e-49 | -8.615850e-47 |
| Msa0238250 | Msa0909000 | 0.837915 | 3.920121e-57 | -8.615850e-47 |
| Msa0238250 | Msa0926460 | -0.818810 | 1.613554e-52 | -8.615850e-47 |
| Msa0238250 | Msa0935850 | -0.830522 | 2.800328e-55 | -8.615850e-47 |
| Msa0238250 | Msa0950320 | -0.807990 | 3.858917e-50 | -8.615850e-47 |
| Msa0238250 | Msa0965860 | -0.818647 | 1.757759e-52 | -8.615850e-47 |
| Msa0238250 | Msa0981820 | 0.828621 | 8.121718e-55 | -8.615850e-47 |
| Msa0238250 | Msa1000690 | -0.803085 | 4.123964e-49 | -8.615850e-47 |
| Msa0238250 | Msa1004900 | 0.824570 | 7.513306e-54 | -8.615850e-47 |
| Msa0238250 | Msa1007610 | 0.828788 | 7.398536e-55 | -8.615850e-47 |
| Msa0238250 | Msa1047400 | -0.820256 | 7.549920e-53 | -8.615850e-47 |
| Msa0238250 | Msa1048330 | -0.804470 | 2.127667e-49 | -8.615850e-47 |
| Msa0238250 | Msa1051200 | -0.815994 | 6.951582e-52 | -8.615850e-47 |
| Msa0238250 | Msa1067440 | 0.809576 | 1.767020e-50 | -8.615850e-47 |
| Msa0238250 | Msa1072460 | 0.857601 | 1.460831e-62 | -8.615850e-47 |
| Msa0238250 | Msa1084470 | -0.816253 | 6.082772e-52 | -8.615850e-47 |
| Msa0238250 | Msa1111630 | -0.804367 | 2.234712e-49 | -8.615850e-47 |
| Msa0238250 | Msa1126120 | 0.825941 | 3.562584e-54 | -8.615850e-47 |
| Msa0238250 | Msa1130210 | 0.811908 | 5.533584e-51 | -8.615850e-47 |
| Msa0238250 | Msa1132520 | -0.805945 | 1.044503e-49 | -8.615850e-47 |
| Msa0238250 | Msa1136540 | -0.836351 | 9.848053e-57 | -8.615850e-47 |
| Msa0238250 | Msa1137700 | -0.811500 | 6.785937e-51 | -8.615850e-47 |
| Msa0238250 | Msa1143930 | 0.884198 | 2.353300e-71 | -8.615850e-47 |
| Msa0238250 | Msa1157420 | 0.815498 | 8.964667e-52 | -8.615850e-47 |
| Msa0238250 | Msa1171690 | -0.807647 | 4.563136e-50 | -8.615850e-47 |
| Msa0238250 | Msa1171870 | -0.848813 | 4.825550e-60 | -8.615850e-47 |
| Msa0238250 | Msa1177240 | -0.803613 | 3.206749e-49 | -8.615850e-47 |
| Msa0238250 | Msa1186950 | 0.804482 | 2.115115e-49 | -8.615850e-47 |
| Msa0238250 | Msa1187520 | -0.807170 | 5.761994e-50 | -8.615850e-47 |
| Msa0238250 | Msa1188940 | -0.807742 | 4.357380e-50 | -8.615850e-47 |
| Msa0238250 | Msa1191470 | 0.824711 | 6.959879e-54 | -8.615850e-47 |
| Msa0238250 | Msa1204980 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
| Msa0238250 | Msa1205010 | 0.813212 | 2.868860e-51 | -8.615850e-47 |
| Msa0238250 | Msa1206020 | -0.818803 | 1.619681e-52 | -8.615850e-47 |
| Msa0238250 | Msa1212760 | -0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa0238250 | Msa1217430 | 0.883250 | 5.261526e-71 | -8.615850e-47 |
| Msa0238250 | Msa1217830 | -0.815092 | 1.103773e-51 | -8.615850e-47 |
| Msa0238250 | Msa1224810 | -0.801535 | 8.602028e-49 | -8.615850e-47 |
| Msa0238250 | Msa1227860 | 0.801963 | 7.026089e-49 | -8.615850e-47 |
| Msa0238250 | Msa1236640 | 0.824938 | 6.153679e-54 | -8.615850e-47 |
| Msa0238250 | Msa1237030 | -0.800458 | 1.427621e-48 | -8.615850e-47 |
| Msa0238250 | Msa1257330 | 0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa0238250 | Msa1260130 | -0.853184 | 2.826217e-61 | -8.615850e-47 |
| Msa0238250 | Msa1262920 | -0.821604 | 3.696492e-53 | -8.615850e-47 |
| Msa0238250 | Msa1267260 | -0.835225 | 1.899025e-56 | -8.615850e-47 |
| Msa0238250 | Msa1269580 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0238250 | Msa1270960 | 0.837130 | 6.234040e-57 | -8.615850e-47 |
| Msa0238250 | Msa1271210 | -0.807033 | 6.158136e-50 | -8.615850e-47 |
| Msa0238250 | Msa1282920 | -0.806704 | 7.226857e-50 | -8.615850e-47 |
| Msa0238250 | Msa1284520 | -0.812661 | 3.789167e-51 | -8.615850e-47 |
| Msa0238250 | Msa1300050 | -0.833986 | 3.890932e-56 | -8.615850e-47 |
| Msa0238250 | Msa1300350 | 0.825867 | 3.707765e-54 | -8.615850e-47 |
| Msa0238250 | Msa1302100 | -0.841666 | 4.137975e-58 | -8.615850e-47 |
| Msa0238250 | Msa1302190 | 0.892689 | 1.258832e-74 | -8.615850e-47 |
| Msa0238250 | Msa1306430 | -0.843777 | 1.137028e-58 | -8.615850e-47 |
| Msa0238250 | Msa1306580 | -0.807488 | 4.932097e-50 | -8.615850e-47 |
| Msa0238250 | Msa1308080 | 0.823770 | 1.157894e-53 | -8.615850e-47 |
| Msa0238250 | Msa1324000 | -0.809093 | 2.243733e-50 | -8.615850e-47 |
| Msa0238250 | Msa1328850 | -0.816336 | 5.829036e-52 | -8.615850e-47 |
| Msa0238250 | Msa1342640 | 0.826376 | 2.806157e-54 | -8.615850e-47 |
| Msa0238250 | Msa1369530 | -0.826620 | 2.454474e-54 | -8.615850e-47 |
| Msa0238250 | Msa1375340 | -0.816388 | 5.675645e-52 | -8.615850e-47 |
| Msa0238250 | Msa1382410 | -0.805151 | 1.533286e-49 | -8.615850e-47 |
| Msa0238250 | Msa1387200 | -0.812509 | 4.091624e-51 | -8.615850e-47 |
| Msa0238250 | Msa1388790 | 0.829802 | 4.198157e-55 | -8.615850e-47 |
| Msa0238250 | Msa1391490 | -0.819966 | 8.799171e-53 | -8.615850e-47 |
| Msa0238250 | Msa1395230 | 0.838706 | 2.451587e-57 | -8.615850e-47 |
| Msa0238250 | Msa1397970 | -0.802859 | 4.594303e-49 | -8.615850e-47 |
| Msa0238250 | Msa1398800 | -0.815949 | 7.111148e-52 | -8.615850e-47 |
| Msa0238250 | Msa1403580 | 0.833441 | 5.325036e-56 | -8.615850e-47 |
| Msa0238250 | Msa1403930 | 0.862548 | 4.688168e-64 | -8.615850e-47 |
| Msa0238250 | Msa1410430 | 0.825672 | 4.125069e-54 | -8.615850e-47 |
| Msa0238250 | Msa1415240 | 0.823063 | 1.694814e-53 | -8.615850e-47 |
| Msa0238250 | Msa1417530 | -0.815371 | 9.566467e-52 | -8.615850e-47 |
| Msa0238250 | Msa1419800 | 0.842291 | 2.828872e-58 | -8.615850e-47 |
| Msa0238250 | Msa1427830 | -0.861367 | 1.078304e-63 | -8.615850e-47 |
| Msa0238250 | Msa1429360 | 0.802331 | 5.902853e-49 | -8.615850e-47 |
| Msa0238250 | Msa1432400 | -0.823857 | 1.104935e-53 | -8.615850e-47 |
| Msa0238250 | Msa1440000 | -0.814829 | 1.262325e-51 | -8.615850e-47 |
| Msa0238250 | Msa1440610 | -0.842683 | 2.226590e-58 | -8.615850e-47 |
| Msa0238250 | Msa1443290 | 0.822914 | 1.835556e-53 | -8.615850e-47 |
| Msa0238250 | Msa1447300 | -0.813755 | 2.179472e-51 | -8.615850e-47 |
| Msa0238250 | Msa1449250 | 0.843358 | 1.472215e-58 | -8.615850e-47 |
| Msa0238250 | Msa1449880 | -0.810291 | 1.240276e-50 | -8.615850e-47 |
| Msa0238250 | Msa1453620 | -0.839078 | 1.964754e-57 | -8.615850e-47 |
| Msa0238250 | Msa1453780 | 0.811498 | 6.792784e-51 | -8.615850e-47 |
| Msa0238250 | Msa1454110 | -0.865605 | 5.231664e-65 | -8.615850e-47 |
| Msa0238250 | Msa1454910 | 0.809605 | 1.742205e-50 | -8.615850e-47 |
| Msa0238250 | Msa1460470 | -0.811537 | 6.662625e-51 | -8.615850e-47 |
| Msa0238250 | Msa1465960 | -0.828172 | 1.042283e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238250 | MtrunA17_Chr2g0287991 | 98.688 | 381 | 5 | 0 | 1 | 381 | 1 | 381 | 0.0 | 768 |
| Msa0238250 | MtrunA17_Chr2g0322261 | 38.746 | 351 | 183 | 8 | 32 | 352 | 31 | 379 | 6.33e-59 | 196 |
| Msa0238250 | MtrunA17_Chr7g0267851 | 34.936 | 312 | 150 | 10 | 4 | 286 | 10 | 297 | 1.37e-42 | 150 |
| Msa0238250 | MtrunA17_Chr8g0348651 | 54.167 | 48 | 22 | 0 | 35 | 82 | 137 | 184 | 1.72e-12 | 65.9 |
| Msa0238250 | MtrunA17_Chr8g0387191 | 47.170 | 53 | 28 | 0 | 35 | 87 | 153 | 205 | 7.44e-12 | 64.3 |
| Msa0238250 | MtrunA17_Chr7g0248061 | 52.083 | 48 | 23 | 0 | 35 | 82 | 137 | 184 | 2.42e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238250 | AT4G14220.1 | 44.134 | 358 | 141 | 10 | 30 | 358 | 38 | 365 | 2.45e-73 | 233 |
| Msa0238250 | AT5G22000.2 | 43.234 | 303 | 139 | 9 | 32 | 309 | 27 | 321 | 2.50e-60 | 199 |
| Msa0238250 | AT5G22000.3 | 43.234 | 303 | 139 | 9 | 32 | 309 | 27 | 321 | 2.87e-60 | 199 |
| Msa0238250 | AT5G22000.1 | 43.234 | 303 | 139 | 9 | 32 | 309 | 27 | 321 | 2.87e-60 | 199 |
| Msa0238250 | AT5G22000.4 | 38.372 | 258 | 126 | 9 | 77 | 309 | 1 | 250 | 2.60e-32 | 124 |
| Msa0238250 | AT4G00335.2 | 47.273 | 55 | 29 | 0 | 32 | 86 | 133 | 187 | 9.92e-12 | 63.9 |
| Msa0238250 | AT4G00335.1 | 47.273 | 55 | 29 | 0 | 32 | 86 | 133 | 187 | 9.92e-12 | 63.9 |
| Msa0238250 | AT4G00335.3 | 47.273 | 55 | 29 | 0 | 32 | 86 | 133 | 187 | 9.92e-12 | 63.9 |
| Msa0238250 | AT5G41350.1 | 45.833 | 48 | 26 | 0 | 35 | 82 | 158 | 205 | 8.39e-11 | 61.6 |
| Msa0238250 | AT5G41350.3 | 45.833 | 48 | 26 | 0 | 35 | 82 | 158 | 205 | 8.39e-11 | 61.6 |
| Msa0238250 | AT5G41350.2 | 45.833 | 48 | 26 | 0 | 35 | 82 | 183 | 230 | 9.18e-11 | 62.0 |
Find 122 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCTTCTGGGCCTGTATC+TGG | 0.093435 | 2_2:-11656611 | Msa0238250:CDS |
| TGAAATAATTTACTAGATTT+TGG | 0.099497 | 2_2:-11654652 | Msa0238250:three_prime_UTR |
| GAGCCAGTAACTTCTCTTTA+AGG | 0.167971 | 2_2:+11655799 | None:intergenic |
| CATATGTTTATTTCTTTGTT+AGG | 0.254430 | 2_2:-11658652 | Msa0238250:five_prime_UTR |
| CTCTAATTCCTGTCCGTAAT+GGG | 0.265206 | 2_2:-11655659 | Msa0238250:CDS |
| AATTTATTTAGGCCAATTTC+AGG | 0.278253 | 2_2:-11654579 | Msa0238250:three_prime_UTR |
| CTAAAACAGTAGCCTGAAAT+TGG | 0.301994 | 2_2:+11654567 | None:intergenic |
| GAAAGTGATTGCCAACATAT+TGG | 0.309790 | 2_2:+11657124 | None:intergenic |
| AGCAGAAAATTTAGATTTGA+AGG | 0.325081 | 2_2:+11655949 | None:intergenic |
| CTGAGGTTGATGTCCCTTAC+AGG | 0.328512 | 2_2:-11656484 | Msa0238250:CDS |
| AGGTGAAAGTGGCCATTGTT+AGG | 0.329942 | 2_2:+11658510 | None:intergenic |
| TAATTCTTGCAACAGATATA+AGG | 0.332956 | 2_2:-11655847 | Msa0238250:intron |
| TCCTCTCTACATGTCAATAC+TGG | 0.336210 | 2_2:-11654685 | Msa0238250:three_prime_UTR |
| CTATGCTGACTTGTTCAAAA+AGG | 0.355448 | 2_2:-11654851 | Msa0238250:three_prime_UTR |
| AATCAGTACCTTGGCCTGTA+AGG | 0.372499 | 2_2:+11656470 | None:intergenic |
| CCTCTAATTCCTGTCCGTAA+TGG | 0.378043 | 2_2:-11655660 | Msa0238250:CDS |
| CTCTCATCCTGAGGTGGTGA+TGG | 0.386660 | 2_2:+11656010 | None:intergenic |
| TGAACCTCACCTACTTTGTA+AGG | 0.389739 | 2_2:-11654496 | Msa0238250:three_prime_UTR |
| GCCTTGATCTTGCCTCAAAA+AGG | 0.392265 | 2_2:-11655692 | Msa0238250:CDS |
| TAAATTCCTACTACAAATCA+TGG | 0.392317 | 2_2:+11654764 | None:intergenic |
| AAAGTGATTGCCAACATATT+GGG | 0.393517 | 2_2:+11657125 | None:intergenic |
| AGAGAGAAGGGAGAAAGAAA+AGG | 0.399544 | 2_2:+11658574 | None:intergenic |
| CAGAGAAGACAGGGATCGTC+TGG | 0.403840 | 2_2:-11656662 | Msa0238250:CDS |
| CATCTTCACTCACTAATTCT+CGG | 0.418524 | 2_2:-11656925 | Msa0238250:CDS |
| GAGAGAAGGGAGAAAGAAAA+GGG | 0.423480 | 2_2:+11658575 | None:intergenic |
| ACTCTTCTGGGCCTGTATCT+GGG | 0.428779 | 2_2:-11656610 | Msa0238250:CDS |
| TGGCCTTAAAGAGAAGTTAC+TGG | 0.429545 | 2_2:-11655802 | Msa0238250:CDS |
| CCATTACGGACAGGAATTAG+AGG | 0.430973 | 2_2:+11655660 | None:intergenic |
| GGAAATTCCTCCATATGTTC+AGG | 0.432060 | 2_2:-11655514 | Msa0238250:intron |
| CTCTTCAACAGACTTCCCTT+CGG | 0.442480 | 2_2:+11655620 | None:intergenic |
| ACCTGCATTGCATTCTTGAA+TGG | 0.443529 | 2_2:-11657247 | Msa0238250:intron |
| AAGATGAAACATACAGTTGA+TGG | 0.451081 | 2_2:+11658356 | None:intergenic |
| GAGATGAATGCTGGCATAGC+TGG | 0.452625 | 2_2:-11655735 | Msa0238250:CDS |
| GGACGAGCGTTGGCAGTTGA+TGG | 0.452688 | 2_2:+11656530 | None:intergenic |
| GTTGATTGCATCCCAGATAC+AGG | 0.453284 | 2_2:+11656599 | None:intergenic |
| ATCTTCACTCACTAATTCTC+GGG | 0.453331 | 2_2:-11656924 | Msa0238250:CDS |
| ATGCTGTGAAGACTTAGCTT+GGG | 0.454516 | 2_2:-11654887 | Msa0238250:exon |
| GAAGAGGATGGAGCTGAGAA+AGG | 0.454590 | 2_2:+11658449 | None:intergenic |
| GTCGGTGAGCTACCGCCAAC+TGG | 0.458070 | 2_2:+11656563 | None:intergenic |
| CTCTACTTGCAGCGGCATAT+AGG | 0.463448 | 2_2:+11656702 | None:intergenic |
| TGATGATGATGGAGAAGAGA+AGG | 0.464602 | 2_2:+11658487 | None:intergenic |
| GGTGAAAGTGGCCATTGTTA+GGG | 0.464658 | 2_2:+11658511 | None:intergenic |
| TTTCTTTGAAAGACCCTGCC+TGG | 0.465367 | 2_2:-11657105 | Msa0238250:intron |
| AGCTGAGAAAGGAGGAGGAG+TGG | 0.468770 | 2_2:+11658460 | None:intergenic |
| GATGGACTAACCTGAACATA+TGG | 0.471478 | 2_2:+11655504 | None:intergenic |
| ATCTCATCACACGTCTGAAT+CGG | 0.477572 | 2_2:-11658603 | Msa0238250:five_prime_UTR |
| AAATTTAGATTTGAAGGACT+CGG | 0.485514 | 2_2:+11655955 | None:intergenic |
| CTAACAAAGAAATAAACATA+TGG | 0.485707 | 2_2:+11658653 | None:intergenic |
| TTACAGTCCATCACCACCTC+AGG | 0.487454 | 2_2:-11656017 | Msa0238250:CDS |
| GATGGAGCTGAGAAAGGAGG+AGG | 0.494226 | 2_2:+11658455 | None:intergenic |
| TTAGGTGAGAACTGAGGAAG+TGG | 0.495917 | 2_2:+11658534 | None:intergenic |
| TGTTCAGAGACAGAGAAGAC+AGG | 0.496007 | 2_2:-11656672 | Msa0238250:CDS |
| CAAATAAACATATACCAGGC+AGG | 0.496575 | 2_2:+11657091 | None:intergenic |
| TGAATAAGAAGAAAGAGAGA+AGG | 0.496936 | 2_2:+11658561 | None:intergenic |
| GAGGATGGAGCTGAGAAAGG+AGG | 0.499832 | 2_2:+11658452 | None:intergenic |
| GTACTAAATCCTTACAAAGT+AGG | 0.500324 | 2_2:+11654487 | None:intergenic |
| AATGCTCCATGATTTGTAGT+AGG | 0.501923 | 2_2:-11654770 | Msa0238250:three_prime_UTR |
| AAGTGGCCATTGTTAGGGTT+AGG | 0.504549 | 2_2:+11658516 | None:intergenic |
| AATTTAGATTTGAAGGACTC+GGG | 0.514225 | 2_2:+11655956 | None:intergenic |
| AGACAGGGATCGTCTGGAGC+AGG | 0.517977 | 2_2:-11656656 | Msa0238250:CDS |
| CTAGTGTTTCTTGCAACCTC+AGG | 0.518593 | 2_2:+11656509 | None:intergenic |
| GAATAAGAAGAAAGAGAGAA+GGG | 0.518676 | 2_2:+11658562 | None:intergenic |
| AGAAGAGAAGGAGGTGAAAG+TGG | 0.519583 | 2_2:+11658499 | None:intergenic |
| ACCATTCAAGAATGCAATGC+AGG | 0.523952 | 2_2:+11657246 | None:intergenic |
| ATCAAAATCAATTTCATCTG+AGG | 0.534385 | 2_2:+11656742 | None:intergenic |
| AGATTTGAAGGACTCGGGAA+AGG | 0.536774 | 2_2:+11655961 | None:intergenic |
| GCAAAGAGTGCCCAATATGT+TGG | 0.538649 | 2_2:-11657135 | Msa0238250:CDS |
| ATCATCAAAAGCTGAAGAAG+AGG | 0.541296 | 2_2:+11658433 | None:intergenic |
| TCTGTTGAAGAGAAAGACAC+TGG | 0.543702 | 2_2:-11655609 | Msa0238250:CDS |
| TTGAAAACAAGAATCTCTGA+TGG | 0.551136 | 2_2:+11656632 | None:intergenic |
| GTTCAGAGACAGAGAAGACA+GGG | 0.552538 | 2_2:-11656671 | Msa0238250:CDS |
| TAGCACTGTTGCTAGTCGAA+TGG | 0.553644 | 2_2:-11655535 | Msa0238250:CDS |
| CCACAGCGTCAAGAAGCTCT+TGG | 0.555254 | 2_2:+11656984 | None:intergenic |
| AGTTTCCTCTCATCCTGAGG+TGG | 0.556607 | 2_2:+11656004 | None:intergenic |
| ACAGTAAAAGAGCTGAGTAA+AGG | 0.560131 | 2_2:-11655768 | Msa0238250:CDS |
| TTTAGTTTCCTCTCATCCTG+AGG | 0.560375 | 2_2:+11656001 | None:intergenic |
| AAAGGTGCAAGAGACGACTT+TGG | 0.562692 | 2_2:-11654833 | Msa0238250:three_prime_UTR |
| TCACCATTAGAATATCCAAA+GGG | 0.563103 | 2_2:+11656899 | None:intergenic |
| TGGAGCATTGATAACAATGC+AGG | 0.563861 | 2_2:+11654784 | None:intergenic |
| AACTGCCAACGCTCGTCCTG+AGG | 0.563873 | 2_2:-11656525 | Msa0238250:CDS |
| GATGCTGTGAAGACTTAGCT+TGG | 0.567829 | 2_2:-11654888 | Msa0238250:exon |
| ATCAGTACCTTGGCCTGTAA+GGG | 0.570690 | 2_2:+11656471 | None:intergenic |
| CTTACAACTTCACCAGTTGG+CGG | 0.573253 | 2_2:-11656575 | Msa0238250:CDS |
| TGATGATGGAGAAGAGAAGG+AGG | 0.574257 | 2_2:+11658490 | None:intergenic |
| AGAGCTTCTTGACGCTGTGG+AGG | 0.581549 | 2_2:-11656981 | Msa0238250:CDS |
| GGAGTGGAAGATGATGATGA+TGG | 0.581573 | 2_2:+11658476 | None:intergenic |
| CATCACCACCTCAGGATGAG+AGG | 0.582341 | 2_2:-11656009 | Msa0238250:CDS |
| TCTAATTCCTGTCCGTAATG+GGG | 0.587637 | 2_2:-11655658 | Msa0238250:CDS |
| CTGTAAGGGACATCAACCTC+AGG | 0.588123 | 2_2:+11656485 | None:intergenic |
| ACGCATACCAACATGTGCAT+TGG | 0.588346 | 2_2:+11654807 | None:intergenic |
| ACACTTACAACTTCACCAGT+TGG | 0.591557 | 2_2:-11656578 | Msa0238250:CDS |
| TTGATGTCCCTTACAGGCCA+AGG | 0.595595 | 2_2:-11656478 | Msa0238250:intron |
| CTAATTCCTGTCCGTAATGG+GGG | 0.595714 | 2_2:-11655657 | Msa0238250:CDS |
| TTAGGGTTAGGTGAGAACTG+AGG | 0.599917 | 2_2:+11658528 | None:intergenic |
| AGATGAAACATACAGTTGAT+GGG | 0.600146 | 2_2:+11658357 | None:intergenic |
| AATTCTAAAACTGAAGCAAG+TGG | 0.605650 | 2_2:-11655585 | Msa0238250:CDS |
| CCAAGAGCTTCTTGACGCTG+TGG | 0.605864 | 2_2:-11656984 | Msa0238250:CDS |
| GTTCAACGTGAGATGAATGC+TGG | 0.607319 | 2_2:-11655744 | Msa0238250:CDS |
| TGCAACCTCAGGACGAGCGT+TGG | 0.607887 | 2_2:+11656520 | None:intergenic |
| ATCACCATTAGAATATCCAA+AGG | 0.608593 | 2_2:+11656898 | None:intergenic |
| TCAAAAGCTGAAGAAGAGGA+TGG | 0.610945 | 2_2:+11658437 | None:intergenic |
| AAATAAACATATACCAGGCA+GGG | 0.612594 | 2_2:+11657092 | None:intergenic |
| TCAATTTCTAAAAGTACTCG+TGG | 0.615408 | 2_2:-11655822 | Msa0238250:CDS |
| GGCAGTTGATGGTAGATCAG+TGG | 0.627162 | 2_2:+11656541 | None:intergenic |
| TCCAGTATTGACATGTAGAG+AGG | 0.628190 | 2_2:+11654684 | None:intergenic |
| ACAGTGCTAGAAATGTGTGA+GGG | 0.630970 | 2_2:+11655549 | None:intergenic |
| CTGTTGAAGAGAAAGACACT+GGG | 0.636117 | 2_2:-11655608 | Msa0238250:CDS |
| AACAGTGCTAGAAATGTGTG+AGG | 0.645291 | 2_2:+11655548 | None:intergenic |
| GGACTAACCTGAACATATGG+AGG | 0.649006 | 2_2:+11655507 | None:intergenic |
| AAAACGAGCTCTACTTGCAG+CGG | 0.654386 | 2_2:+11656694 | None:intergenic |
| TTGGTGACCAATGCACATGT+TGG | 0.660739 | 2_2:-11654814 | Msa0238250:three_prime_UTR |
| AAATCCTTACAAAGTAGGTG+AGG | 0.660803 | 2_2:+11654492 | None:intergenic |
| GATCAATTTATAGAGCTCAG+TGG | 0.663393 | 2_2:-11654731 | Msa0238250:three_prime_UTR |
| CAGTGCTAGAAATGTGTGAG+GGG | 0.664316 | 2_2:+11655550 | None:intergenic |
| ACCATTAGAATATCCAAAGG+GGG | 0.670624 | 2_2:+11656901 | None:intergenic |
| TGCAAGAAACACTAGTCCTG+AGG | 0.676328 | 2_2:-11656501 | Msa0238250:CDS |
| GTTGATGGTAGATCAGTGGT+CGG | 0.680474 | 2_2:+11656545 | None:intergenic |
| AGTGCTAGAAATGTGTGAGG+GGG | 0.683784 | 2_2:+11655551 | None:intergenic |
| TTCTCACCTAACCCTAACAA+TGG | 0.684107 | 2_2:-11658522 | Msa0238250:exon |
| TGCTGTGAAGACTTAGCTTG+GGG | 0.693141 | 2_2:-11654886 | Msa0238250:exon |
| GTAGAGAGGAACAATAACCA+TGG | 0.693467 | 2_2:+11654698 | None:intergenic |
| CACCATTAGAATATCCAAAG+GGG | 0.704628 | 2_2:+11656900 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAGATTTTGCATT+TGG | - | chr2_2:11654790-11654809 | Msa0238250:three_prime_UTR | 15.0% |
| !!! | TTTTTTTAGATTTTGCATTT+GGG | - | chr2_2:11654791-11654810 | Msa0238250:three_prime_UTR | 15.0% |
| !! | TTATGATGATTAAATAAACA+TGG | + | chr2_2:11655175-11655194 | None:intergenic | 15.0% |
| !! | ATGTTTATTTAATCATCATA+AGG | - | chr2_2:11655174-11655193 | Msa0238250:intron | 15.0% |
| !!! | AAGTAATAAATTTTTATGTG+TGG | - | chr2_2:11655563-11655582 | Msa0238250:CDS | 15.0% |
| !!! | ACATAAATTGTTTTTTCTTT+AGG | - | chr2_2:11655942-11655961 | Msa0238250:CDS | 15.0% |
| !! | TTGTAACTTATATATATTCA+GGG | + | chr2_2:11656806-11656825 | None:intergenic | 15.0% |
| !! | TTTGTAACTTATATATATTC+AGG | + | chr2_2:11656807-11656826 | None:intergenic | 15.0% |
| !!! | AAAACCCTATAATTTTAATA+TGG | - | chr2_2:11657817-11657836 | Msa0238250:intron | 15.0% |
| !! | GATACCATATTAAAATTATA+GGG | + | chr2_2:11657824-11657843 | None:intergenic | 15.0% |
| !! | TGATACCATATTAAAATTAT+AGG | + | chr2_2:11657825-11657844 | None:intergenic | 15.0% |
| !!! | TGAAATAATTTACTAGATTT+TGG | - | chr2_2:11658458-11658477 | Msa0238250:CDS | 15.0% |
| !! | CTAACAAAGAAATAAACATA+TGG | + | chr2_2:11654460-11654479 | None:intergenic | 20.0% |
| !!! | CATATGTTTATTTCTTTGTT+AGG | - | chr2_2:11654458-11654477 | Msa0238250:three_prime_UTR | 20.0% |
| !! | TTTAATCATCATAAGGATTA+AGG | - | chr2_2:11655181-11655200 | Msa0238250:intron | 20.0% |
| !!! | ATATGTTACGTTTTAATTTC+AGG | - | chr2_2:11655816-11655835 | Msa0238250:CDS | 20.0% |
| !! | TTTCTTGTGTTAAAATTTGT+TGG | - | chr2_2:11656268-11656287 | Msa0238250:intron | 20.0% |
| !! | TACTATCATTCAATGATTAA+AGG | - | chr2_2:11656320-11656339 | Msa0238250:intron | 20.0% |
| !!! | TTACGAGTAAAAAGTTATTT+TGG | - | chr2_2:11656741-11656760 | Msa0238250:CDS | 20.0% |
| !! | TTAACATATGAAACATTAGT+AGG | + | chr2_2:11657045-11657064 | None:intergenic | 20.0% |
| !! | TAAAAAAAGAGTTTGATAGA+TGG | + | chr2_2:11657633-11657652 | None:intergenic | 20.0% |
| !!! | TATCTGATACTTTTATTTCT+AGG | - | chr2_2:11657685-11657704 | Msa0238250:intron | 20.0% |
| !!! | GTTGTCAACTATTTTTTTTT+GGG | + | chr2_2:11658091-11658110 | None:intergenic | 20.0% |
| !!! | TGTTGTCAACTATTTTTTTT+TGG | + | chr2_2:11658092-11658111 | None:intergenic | 20.0% |
| !!! | AATAATTTACTAGATTTTGG+AGG | - | chr2_2:11658461-11658480 | Msa0238250:CDS | 20.0% |
| ! | CATCAAATTTCTATACAACA+AGG | + | chr2_2:11654906-11654925 | None:intergenic | 25.0% |
| ! | AATTTGATGTGTGTTTATGA+TGG | - | chr2_2:11654917-11654936 | Msa0238250:intron | 25.0% |
| !!! | TGTTTTTACCTTGATTTTTG+TGG | - | chr2_2:11654997-11655016 | Msa0238250:intron | 25.0% |
| !! | TGAATTTGCTTAAAATTTCG+AGG | - | chr2_2:11655041-11655060 | Msa0238250:intron | 25.0% |
| !! | TAAACTTTTATGACACTGTT+TGG | - | chr2_2:11655249-11655268 | Msa0238250:intron | 25.0% |
| !! | AAACTTTTATGACACTGTTT+GGG | - | chr2_2:11655250-11655269 | Msa0238250:intron | 25.0% |
| ! | GTTATATAAGCACTTATGAA+TGG | + | chr2_2:11655415-11655434 | None:intergenic | 25.0% |
| ! | AATAAGCTATTTATCCAAAC+AGG | - | chr2_2:11655459-11655478 | Msa0238250:intron | 25.0% |
| !! | TAAATTTTTATGTGTGGATG+AGG | - | chr2_2:11655569-11655588 | Msa0238250:CDS | 25.0% |
| ! | ATAGATAAATATATCGTTGC+GGG | + | chr2_2:11655673-11655692 | None:intergenic | 25.0% |
| ! | GATAGATAAATATATCGTTG+CGG | + | chr2_2:11655674-11655693 | None:intergenic | 25.0% |
| ! | AAACGTAACATATTAACACA+CGG | + | chr2_2:11655809-11655828 | None:intergenic | 25.0% |
| ! | CTAATTCATCAAGCTATATA+AGG | + | chr2_2:11655893-11655912 | None:intergenic | 25.0% |
| ! | TTTGCAAATAAACATATACC+AGG | + | chr2_2:11656026-11656045 | None:intergenic | 25.0% |
| ! | AAAAAGCTTGTATTGAGAAT+GGG | + | chr2_2:11656060-11656079 | None:intergenic | 25.0% |
| ! | TAAAAAGCTTGTATTGAGAA+TGG | + | chr2_2:11656061-11656080 | None:intergenic | 25.0% |
| !! | TTCTCAATACAAGCTTTTTA+TGG | - | chr2_2:11656061-11656080 | Msa0238250:intron | 25.0% |
| ! | ATAGTATGATAAACGTATCA+AGG | + | chr2_2:11656306-11656325 | None:intergenic | 25.0% |
| ! | ATCAAAATCAATTTCATCTG+AGG | + | chr2_2:11656371-11656390 | None:intergenic | 25.0% |
| !!! | AGATGAAATTGATTTTGATG+AGG | - | chr2_2:11656372-11656391 | Msa0238250:intron | 25.0% |
| !!! | CTTTTAAGTATAATAAGCAG+TGG | - | chr2_2:11656671-11656690 | Msa0238250:CDS | 25.0% |
| ! | TGATGAATTAAACTGACTAA+TGG | - | chr2_2:11656860-11656879 | Msa0238250:intron | 25.0% |
| !! | TCAAGGATGTTTTGTAATTT+TGG | - | chr2_2:11656954-11656973 | Msa0238250:CDS | 25.0% |
| !! | CAAGGATGTTTTGTAATTTT+GGG | - | chr2_2:11656955-11656974 | Msa0238250:CDS | 25.0% |
| ! | TGAAACATTAGTAGGTAAAT+GGG | + | chr2_2:11657037-11657056 | None:intergenic | 25.0% |
| ! | ATGAAACATTAGTAGGTAAA+TGG | + | chr2_2:11657038-11657057 | None:intergenic | 25.0% |
| !!! | TTCATATGTTAACTTTTTCC+TGG | - | chr2_2:11657053-11657072 | Msa0238250:intron | 25.0% |
| ! | AAATTTAGATTTGAAGGACT+CGG | + | chr2_2:11657158-11657177 | None:intergenic | 25.0% |
| ! | AGCAGAAAATTTAGATTTGA+AGG | + | chr2_2:11657164-11657183 | None:intergenic | 25.0% |
| ! | TAATTCTTGCAACAGATATA+AGG | - | chr2_2:11657263-11657282 | Msa0238250:CDS | 25.0% |
| ! | ATGTTGTCAACTAAAAAATC+TGG | - | chr2_2:11657925-11657944 | Msa0238250:intron | 25.0% |
| !! | TGATAGAATAAGTTTGTTTG+CGG | - | chr2_2:11657956-11657975 | Msa0238250:intron | 25.0% |
| ! | AAAGAAAAGAAAAAAACGCT+TGG | - | chr2_2:11658036-11658055 | Msa0238250:intron | 25.0% |
| ! | TAAATTCCTACTACAAATCA+TGG | + | chr2_2:11658349-11658368 | None:intergenic | 25.0% |
| ! | AATTTATTTAGGCCAATTTC+AGG | - | chr2_2:11658531-11658550 | Msa0238250:five_prime_UTR | 25.0% |
| GAATAAGAAGAAAGAGAGAA+GGG | + | chr2_2:11654551-11654570 | None:intergenic | 30.0% | |
| TGAATAAGAAGAAAGAGAGA+AGG | + | chr2_2:11654552-11654571 | None:intergenic | 30.0% | |
| AGATGAAACATACAGTTGAT+GGG | + | chr2_2:11654756-11654775 | None:intergenic | 30.0% | |
| AAGATGAAACATACAGTTGA+TGG | + | chr2_2:11654757-11654776 | None:intergenic | 30.0% | |
| TTTGTTGAGAAATGTGAGTT+TGG | - | chr2_2:11654951-11654970 | Msa0238250:intron | 30.0% | |
| AACTCAAACCACAAAAATCA+AGG | + | chr2_2:11655008-11655027 | None:intergenic | 30.0% | |
| ATCATAAGGATTAAGGAATC+AGG | - | chr2_2:11655188-11655207 | Msa0238250:intron | 30.0% | |
| TCATAAGGATTAAGGAATCA+GGG | - | chr2_2:11655189-11655208 | Msa0238250:intron | 30.0% | |
| ! | AAGCTATTCTAAAGAGCTTA+TGG | + | chr2_2:11655328-11655347 | None:intergenic | 30.0% |
| TAGATAAATATATCGTTGCG+GGG | + | chr2_2:11655672-11655691 | None:intergenic | 30.0% | |
| ! | GTTTAATTATGCCTTTTGTG+AGG | - | chr2_2:11655701-11655720 | Msa0238250:CDS | 30.0% |
| TTGTAACTAATCCTCACAAA+AGG | + | chr2_2:11655715-11655734 | None:intergenic | 30.0% | |
| ATAGCTTGATGAATTAGTCA+TGG | - | chr2_2:11655896-11655915 | Msa0238250:intron | 30.0% | |
| AAAGTGATTGCCAACATATT+GGG | + | chr2_2:11655988-11656007 | None:intergenic | 30.0% | |
| AAATAAACATATACCAGGCA+GGG | + | chr2_2:11656021-11656040 | None:intergenic | 30.0% | |
| ! | CAAGCTTTTTATGGTATGAT+TGG | - | chr2_2:11656070-11656089 | Msa0238250:intron | 30.0% |
| TCACCATTAGAATATCCAAA+GGG | + | chr2_2:11656214-11656233 | None:intergenic | 30.0% | |
| ATCACCATTAGAATATCCAA+AGG | + | chr2_2:11656215-11656234 | None:intergenic | 30.0% | |
| AAGGAAAATTACTCTCTTTC+AGG | - | chr2_2:11656339-11656358 | Msa0238250:intron | 30.0% | |
| TTGAAAACAAGAATCTCTGA+TGG | + | chr2_2:11656481-11656500 | None:intergenic | 30.0% | |
| !!! | ATTCTTGTTTTCAACTCTTC+TGG | - | chr2_2:11656487-11656506 | Msa0238250:CDS | 30.0% |
| !!! | TTCTTGTTTTCAACTCTTCT+GGG | - | chr2_2:11656488-11656507 | Msa0238250:CDS | 30.0% |
| TACTCGTAAGTAAACAATCA+GGG | + | chr2_2:11656730-11656749 | None:intergenic | 30.0% | |
| TTACTCGTAAGTAAACAATC+AGG | + | chr2_2:11656731-11656750 | None:intergenic | 30.0% | |
| TGAATAACAAGAGACATTCA+AGG | - | chr2_2:11656937-11656956 | Msa0238250:CDS | 30.0% | |
| AATTTAGATTTGAAGGACTC+GGG | + | chr2_2:11657157-11657176 | None:intergenic | 30.0% | |
| TAAGATAAGTTAGCAGTGAA+GGG | + | chr2_2:11657239-11657258 | None:intergenic | 30.0% | |
| TTAAGATAAGTTAGCAGTGA+AGG | + | chr2_2:11657240-11657259 | None:intergenic | 30.0% | |
| !! | TCAATTTCTAAAAGTACTCG+TGG | - | chr2_2:11657288-11657307 | Msa0238250:intron | 30.0% |
| !! | AATTCTAAAACTGAAGCAAG+TGG | - | chr2_2:11657525-11657544 | Msa0238250:intron | 30.0% |
| !! | GTTTTAGATAAAGAGAGGAA+AGG | + | chr2_2:11657802-11657821 | None:intergenic | 30.0% |
| !!! | ATAGGGTTTTAGATAAAGAG+AGG | + | chr2_2:11657807-11657826 | None:intergenic | 30.0% |
| ACATGATTTGAATTCCTTCA+CGG | + | chr2_2:11657909-11657928 | None:intergenic | 30.0% | |
| ! | ATAAGTTTGTTTGCGGAATT+TGG | - | chr2_2:11657963-11657982 | Msa0238250:intron | 30.0% |
| ! | TAAGTTTGTTTGCGGAATTT+GGG | - | chr2_2:11657964-11657983 | Msa0238250:intron | 30.0% |
| AAAGAAAAAAACGCTTGGAT+TGG | - | chr2_2:11658041-11658060 | Msa0238250:intron | 30.0% | |
| AATACATTCATCACTTCGAA+AGG | + | chr2_2:11658122-11658141 | None:intergenic | 30.0% | |
| !!! | TTACTATTTTGATTCCAGAG+AGG | - | chr2_2:11658195-11658214 | Msa0238250:intron | 30.0% |
| GTACTAAATCCTTACAAAGT+AGG | + | chr2_2:11658626-11658645 | None:intergenic | 30.0% | |
| ATCATCAAAAGCTGAAGAAG+AGG | + | chr2_2:11654680-11654699 | None:intergenic | 35.0% | |
| !!! | ATGTGAGTTTGGTGTGATTT+TGG | - | chr2_2:11654962-11654981 | Msa0238250:intron | 35.0% |
| ! | GCTTATTTGAGTTTATCTGC+TGG | - | chr2_2:11655224-11655243 | Msa0238250:intron | 35.0% |
| CACCTTATGACATGATCATA+AGG | - | chr2_2:11655286-11655305 | Msa0238250:intron | 35.0% | |
| CACCTTATGATCATGTCATA+AGG | + | chr2_2:11655291-11655310 | None:intergenic | 35.0% | |
| AATGTGTATAAGGTCCTGTT+TGG | + | chr2_2:11655476-11655495 | None:intergenic | 35.0% | |
| TATCTCACTCAGTGTATAAC+AGG | - | chr2_2:11655610-11655629 | Msa0238250:CDS | 35.0% | |
| ATCTCACTCAGTGTATAACA+GGG | - | chr2_2:11655611-11655630 | Msa0238250:CDS | 35.0% | |
| TACAACCTGTAGATTACCAA+AGG | - | chr2_2:11655737-11655756 | Msa0238250:CDS | 35.0% | |
| ACAACCTGTAGATTACCAAA+GGG | - | chr2_2:11655738-11655757 | Msa0238250:CDS | 35.0% | |
| !! | TTTTCCCTTTGGTAATCTAC+AGG | + | chr2_2:11655745-11655764 | None:intergenic | 35.0% |
| TAACACACGGTTCAACATTT+AGG | + | chr2_2:11655796-11655815 | None:intergenic | 35.0% | |
| ! | GAATTAGTCATGGATTGTTG+TGG | - | chr2_2:11655906-11655925 | Msa0238250:intron | 35.0% |
| GAAAGTGATTGCCAACATAT+TGG | + | chr2_2:11655989-11656008 | None:intergenic | 35.0% | |
| CAAATAAACATATACCAGGC+AGG | + | chr2_2:11656022-11656041 | None:intergenic | 35.0% | |
| CATCTTCACTCACTAATTCT+CGG | - | chr2_2:11656185-11656204 | Msa0238250:intron | 35.0% | |
| ATCTTCACTCACTAATTCTC+GGG | - | chr2_2:11656186-11656205 | Msa0238250:intron | 35.0% | |
| ACCATTAGAATATCCAAAGG+GGG | + | chr2_2:11656212-11656231 | None:intergenic | 35.0% | |
| CACCATTAGAATATCCAAAG+GGG | + | chr2_2:11656213-11656232 | None:intergenic | 35.0% | |
| GTTATACACAATCAGTACCT+TGG | + | chr2_2:11656652-11656671 | None:intergenic | 35.0% | |
| ! | TTTTGGTCCCTAAATATACG+AGG | - | chr2_2:11656758-11656777 | Msa0238250:intron | 35.0% |
| ! | CTAGAATGTATTAGCCTATC+AGG | + | chr2_2:11656996-11657015 | None:intergenic | 35.0% |
| CTGATAGGCTAATACATTCT+AGG | - | chr2_2:11656994-11657013 | Msa0238250:intron | 35.0% | |
| ! | AAATGGGTGAACAGTCATTT+TGG | + | chr2_2:11657021-11657040 | None:intergenic | 35.0% |
| ACAGTAAAAGAGCTGAGTAA+AGG | - | chr2_2:11657342-11657361 | Msa0238250:intron | 35.0% | |
| AAGAGTTTGATAGATGGAGA+TGG | + | chr2_2:11657627-11657646 | None:intergenic | 35.0% | |
| AACAATGATGAGACAGTTCA+TGG | + | chr2_2:11657870-11657889 | None:intergenic | 35.0% | |
| !! | CTATGCTGACTTGTTCAAAA+AGG | - | chr2_2:11658259-11658278 | Msa0238250:intron | 35.0% |
| ! | AATGCTCCATGATTTGTAGT+AGG | - | chr2_2:11658340-11658359 | Msa0238250:intron | 35.0% |
| GATCAATTTATAGAGCTCAG+TGG | - | chr2_2:11658379-11658398 | Msa0238250:CDS | 35.0% | |
| !!! | TCAGTGGATTTTTTCATCCA+TGG | - | chr2_2:11658395-11658414 | Msa0238250:CDS | 35.0% |
| CTAAAACAGTAGCCTGAAAT+TGG | + | chr2_2:11658546-11658565 | None:intergenic | 35.0% | |
| AAATCCTTACAAAGTAGGTG+AGG | + | chr2_2:11658621-11658640 | None:intergenic | 35.0% | |
| ATCTCATCACACGTCTGAAT+CGG | - | chr2_2:11654507-11654526 | Msa0238250:three_prime_UTR | 40.0% | |
| GAGAGAAGGGAGAAAGAAAA+GGG | + | chr2_2:11654538-11654557 | None:intergenic | 40.0% | |
| AGAGAGAAGGGAGAAAGAAA+AGG | + | chr2_2:11654539-11654558 | None:intergenic | 40.0% | |
| TTCTCACCTAACCCTAACAA+TGG | - | chr2_2:11654588-11654607 | Msa0238250:three_prime_UTR | 40.0% | |
| !! | TGATGATGATGGAGAAGAGA+AGG | + | chr2_2:11654626-11654645 | None:intergenic | 40.0% |
| TCAAAAGCTGAAGAAGAGGA+TGG | + | chr2_2:11654676-11654695 | None:intergenic | 40.0% | |
| CAGCTGCTTCAATGTGTATA+AGG | + | chr2_2:11655486-11655505 | None:intergenic | 40.0% | |
| CTTATACACATTGAAGCAGC+TGG | - | chr2_2:11655484-11655503 | Msa0238250:intron | 40.0% | |
| ! | CAGCTAGCAAATTTTCCCTT+TGG | + | chr2_2:11655756-11655775 | None:intergenic | 40.0% |
| ACCTGCATTGCATTCTTGAA+TGG | - | chr2_2:11655863-11655882 | Msa0238250:intron | 40.0% | |
| ACCATTCAAGAATGCAATGC+AGG | + | chr2_2:11655867-11655886 | None:intergenic | 40.0% | |
| ! | TAGTCATGGATTGTTGTGGT+TGG | - | chr2_2:11655910-11655929 | Msa0238250:intron | 40.0% |
| ACACTTACAACTTCACCAGT+TGG | - | chr2_2:11656532-11656551 | Msa0238250:CDS | 40.0% | |
| GATACCGCCTCGTATATTTA+GGG | + | chr2_2:11656768-11656787 | None:intergenic | 40.0% | |
| TGATACCGCCTCGTATATTT+AGG | + | chr2_2:11656769-11656788 | None:intergenic | 40.0% | |
| GTGTTCTTCGTTCGTTAGTT+TGG | + | chr2_2:11656902-11656921 | None:intergenic | 40.0% | |
| ACGAACGAAGAACACATTCA+AGG | - | chr2_2:11656907-11656926 | Msa0238250:CDS | 40.0% | |
| AAGAACTCTGAACACAAACC+AGG | + | chr2_2:11657074-11657093 | None:intergenic | 40.0% | |
| ! | TTTAGTTTCCTCTCATCCTG+AGG | + | chr2_2:11657112-11657131 | None:intergenic | 40.0% |
| !! | AATTTTCTGCTGCTTCAGCT+AGG | - | chr2_2:11657173-11657192 | Msa0238250:intron | 40.0% |
| ! | TGGCCTTAAAGAGAAGTTAC+TGG | - | chr2_2:11657308-11657327 | Msa0238250:intron | 40.0% |
| GAGCCAGTAACTTCTCTTTA+AGG | + | chr2_2:11657314-11657333 | None:intergenic | 40.0% | |
| !!! | ACCTTTTTGAGGCAAGATCA+AGG | + | chr2_2:11657422-11657441 | None:intergenic | 40.0% |
| TGATCTTGCCTCAAAAAGGT+CGG | - | chr2_2:11657422-11657441 | Msa0238250:intron | 40.0% | |
| CTCTAATTCCTGTCCGTAAT+GGG | - | chr2_2:11657451-11657470 | Msa0238250:intron | 40.0% | |
| TCTAATTCCTGTCCGTAATG+GGG | - | chr2_2:11657452-11657471 | Msa0238250:intron | 40.0% | |
| TCTGTTGAAGAGAAAGACAC+TGG | - | chr2_2:11657501-11657520 | Msa0238250:intron | 40.0% | |
| CTGTTGAAGAGAAAGACACT+GGG | - | chr2_2:11657502-11657521 | Msa0238250:intron | 40.0% | |
| ACAGTGCTAGAAATGTGTGA+GGG | + | chr2_2:11657564-11657583 | None:intergenic | 40.0% | |
| AACAGTGCTAGAAATGTGTG+AGG | + | chr2_2:11657565-11657584 | None:intergenic | 40.0% | |
| GGAAATTCCTCCATATGTTC+AGG | - | chr2_2:11657596-11657615 | Msa0238250:intron | 40.0% | |
| !! | GATGGACTAACCTGAACATA+TGG | + | chr2_2:11657609-11657628 | None:intergenic | 40.0% |
| GTATCAAAGTATACCCTCCT+GGG | - | chr2_2:11657839-11657858 | Msa0238250:intron | 40.0% | |
| AATGATGAGACAGTTCATGG+AGG | + | chr2_2:11657867-11657886 | None:intergenic | 40.0% | |
| TGATTTGAATTCCTTCACGG+TGG | + | chr2_2:11657906-11657925 | None:intergenic | 40.0% | |
| ATGCTGTGAAGACTTAGCTT+GGG | - | chr2_2:11658223-11658242 | Msa0238250:intron | 40.0% | |
| !! | TGGAGCATTGATAACAATGC+AGG | + | chr2_2:11658329-11658348 | None:intergenic | 40.0% |
| GTAGAGAGGAACAATAACCA+TGG | + | chr2_2:11658415-11658434 | None:intergenic | 40.0% | |
| TCCTCTCTACATGTCAATAC+TGG | - | chr2_2:11658425-11658444 | Msa0238250:CDS | 40.0% | |
| !! | TCCAGTATTGACATGTAGAG+AGG | + | chr2_2:11658429-11658448 | None:intergenic | 40.0% |
| TGAACCTCACCTACTTTGTA+AGG | - | chr2_2:11658614-11658633 | Msa0238250:five_prime_UTR | 40.0% | |
| TTAGGTGAGAACTGAGGAAG+TGG | + | chr2_2:11654579-11654598 | None:intergenic | 45.0% | |
| TTAGGGTTAGGTGAGAACTG+AGG | + | chr2_2:11654585-11654604 | None:intergenic | 45.0% | |
| AAGTGGCCATTGTTAGGGTT+AGG | + | chr2_2:11654597-11654616 | None:intergenic | 45.0% | |
| GGTGAAAGTGGCCATTGTTA+GGG | + | chr2_2:11654602-11654621 | None:intergenic | 45.0% | |
| AGGTGAAAGTGGCCATTGTT+AGG | + | chr2_2:11654603-11654622 | None:intergenic | 45.0% | |
| AGAAGAGAAGGAGGTGAAAG+TGG | + | chr2_2:11654614-11654633 | None:intergenic | 45.0% | |
| !! | TGATGATGGAGAAGAGAAGG+AGG | + | chr2_2:11654623-11654642 | None:intergenic | 45.0% |
| ! | GGAGTGGAAGATGATGATGA+TGG | + | chr2_2:11654637-11654656 | None:intergenic | 45.0% |
| CTCAAATAAGCCATCCAAGC+AGG | + | chr2_2:11655215-11655234 | None:intergenic | 45.0% | |
| GGGTAAATGTTTGGCATCAC+AGG | + | chr2_2:11655652-11655671 | None:intergenic | 45.0% | |
| ATCGTTGCGGGGTAAATGTT+TGG | + | chr2_2:11655661-11655680 | None:intergenic | 45.0% | |
| !! | GCAAAGAGTGCCCAATATGT+TGG | - | chr2_2:11655975-11655994 | Msa0238250:CDS | 45.0% |
| ! | TTTCTTTGAAAGACCCTGCC+TGG | - | chr2_2:11656005-11656024 | Msa0238250:CDS | 45.0% |
| GCCCCCTTTGGATATTCTAA+TGG | - | chr2_2:11656208-11656227 | Msa0238250:intron | 45.0% | |
| AAAACGAGCTCTACTTGCAG+CGG | + | chr2_2:11656419-11656438 | None:intergenic | 45.0% | |
| TGTTCAGAGACAGAGAAGAC+AGG | - | chr2_2:11656438-11656457 | Msa0238250:intron | 45.0% | |
| GTTCAGAGACAGAGAAGACA+GGG | - | chr2_2:11656439-11656458 | Msa0238250:intron | 45.0% | |
| GTTGATTGCATCCCAGATAC+AGG | + | chr2_2:11656514-11656533 | None:intergenic | 45.0% | |
| CTTACAACTTCACCAGTTGG+CGG | - | chr2_2:11656535-11656554 | Msa0238250:CDS | 45.0% | |
| !! | GTTGATGGTAGATCAGTGGT+CGG | + | chr2_2:11656568-11656587 | None:intergenic | 45.0% |
| CTAGTGTTTCTTGCAACCTC+AGG | + | chr2_2:11656604-11656623 | None:intergenic | 45.0% | |
| TGCAAGAAACACTAGTCCTG+AGG | - | chr2_2:11656609-11656628 | Msa0238250:CDS | 45.0% | |
| ATCAGTACCTTGGCCTGTAA+GGG | + | chr2_2:11656642-11656661 | None:intergenic | 45.0% | |
| AATCAGTACCTTGGCCTGTA+AGG | + | chr2_2:11656643-11656662 | None:intergenic | 45.0% | |
| TGGTCCCTAAATATACGAGG+CGG | - | chr2_2:11656761-11656780 | Msa0238250:intron | 45.0% | |
| AGATTTGAAGGACTCGGGAA+AGG | + | chr2_2:11657152-11657171 | None:intergenic | 45.0% | |
| GTTCAACGTGAGATGAATGC+TGG | - | chr2_2:11657366-11657385 | Msa0238250:intron | 45.0% | |
| GCCTTGATCTTGCCTCAAAA+AGG | - | chr2_2:11657418-11657437 | Msa0238250:intron | 45.0% | |
| GATCTTGCCTCAAAAAGGTC+GGG | - | chr2_2:11657423-11657442 | Msa0238250:intron | 45.0% | |
| CCATTACGGACAGGAATTAG+AGG | + | chr2_2:11657453-11657472 | None:intergenic | 45.0% | |
| CCTCTAATTCCTGTCCGTAA+TGG | - | chr2_2:11657450-11657469 | Msa0238250:intron | 45.0% | |
| CTAATTCCTGTCCGTAATGG+GGG | - | chr2_2:11657453-11657472 | Msa0238250:intron | 45.0% | |
| ! | GAACTTCAGGCTTTTCCGAA+GGG | - | chr2_2:11657475-11657494 | Msa0238250:intron | 45.0% |
| CTCTTCAACAGACTTCCCTT+CGG | + | chr2_2:11657493-11657512 | None:intergenic | 45.0% | |
| AGTGCTAGAAATGTGTGAGG+GGG | + | chr2_2:11657562-11657581 | None:intergenic | 45.0% | |
| CAGTGCTAGAAATGTGTGAG+GGG | + | chr2_2:11657563-11657582 | None:intergenic | 45.0% | |
| TAGCACTGTTGCTAGTCGAA+TGG | - | chr2_2:11657575-11657594 | Msa0238250:intron | 45.0% | |
| GGACTAACCTGAACATATGG+AGG | + | chr2_2:11657606-11657625 | None:intergenic | 45.0% | |
| GGTATCAAAGTATACCCTCC+TGG | - | chr2_2:11657838-11657857 | Msa0238250:intron | 45.0% | |
| CTGTCTCATCATTGTTCAGC+TGG | - | chr2_2:11657874-11657893 | Msa0238250:intron | 45.0% | |
| GATGCTGTGAAGACTTAGCT+TGG | - | chr2_2:11658222-11658241 | Msa0238250:intron | 45.0% | |
| ! | TGCTGTGAAGACTTAGCTTG+GGG | - | chr2_2:11658224-11658243 | Msa0238250:intron | 45.0% |
| ! | AAAGGTGCAAGAGACGACTT+TGG | - | chr2_2:11658277-11658296 | Msa0238250:intron | 45.0% |
| ! | TTGGTGACCAATGCACATGT+TGG | - | chr2_2:11658296-11658315 | Msa0238250:intron | 45.0% |
| ACGCATACCAACATGTGCAT+TGG | + | chr2_2:11658306-11658325 | None:intergenic | 45.0% | |
| !! | GAAAAATTATTAATTTATTT+AGG | - | chr2_2:11658520-11658539 | Msa0238250:exon | 5.0% |
| GAAGAGGATGGAGCTGAGAA+AGG | + | chr2_2:11654664-11654683 | None:intergenic | 50.0% | |
| TTAAGGAATCAGGGCCTGCT+TGG | - | chr2_2:11655198-11655217 | Msa0238250:intron | 50.0% | |
| CTCTACTTGCAGCGGCATAT+AGG | + | chr2_2:11656411-11656430 | None:intergenic | 50.0% | |
| AACTCTTCTGGGCCTGTATC+TGG | - | chr2_2:11656499-11656518 | Msa0238250:CDS | 50.0% | |
| ACTCTTCTGGGCCTGTATCT+GGG | - | chr2_2:11656500-11656519 | Msa0238250:CDS | 50.0% | |
| !! | GGCAGTTGATGGTAGATCAG+TGG | + | chr2_2:11656572-11656591 | None:intergenic | 50.0% |
| CTGTAAGGGACATCAACCTC+AGG | + | chr2_2:11656628-11656647 | None:intergenic | 50.0% | |
| !! | CTGAGGTTGATGTCCCTTAC+AGG | - | chr2_2:11656626-11656645 | Msa0238250:CDS | 50.0% |
| TTGATGTCCCTTACAGGCCA+AGG | - | chr2_2:11656632-11656651 | Msa0238250:CDS | 50.0% | |
| CTATAACGACTGCGCCTGAT+AGG | - | chr2_2:11656979-11656998 | Msa0238250:CDS | 50.0% | |
| TTACAGTCCATCACCACCTC+AGG | - | chr2_2:11657093-11657112 | Msa0238250:intron | 50.0% | |
| AGTTTCCTCTCATCCTGAGG+TGG | + | chr2_2:11657109-11657128 | None:intergenic | 50.0% | |
| GAGATGAATGCTGGCATAGC+TGG | - | chr2_2:11657375-11657394 | Msa0238250:intron | 50.0% | |
| ! | AGGAGAACCCGACCTTTTTG+AGG | + | chr2_2:11657433-11657452 | None:intergenic | 50.0% |
| AGCCTGAAGTTCCCCCATTA+CGG | + | chr2_2:11657467-11657486 | None:intergenic | 50.0% | |
| ! | GGAACTTCAGGCTTTTCCGA+AGG | - | chr2_2:11657474-11657493 | Msa0238250:intron | 50.0% |
| TCACAGCATCATGTCCTCTC+TGG | + | chr2_2:11658212-11658231 | None:intergenic | 50.0% | |
| AGCTGAGAAAGGAGGAGGAG+TGG | + | chr2_2:11654653-11654672 | None:intergenic | 55.0% | |
| GATGGAGCTGAGAAAGGAGG+AGG | + | chr2_2:11654658-11654677 | None:intergenic | 55.0% | |
| GAGGATGGAGCTGAGAAAGG+AGG | + | chr2_2:11654661-11654680 | None:intergenic | 55.0% | |
| CCACAGCGTCAAGAAGCTCT+TGG | + | chr2_2:11656129-11656148 | None:intergenic | 55.0% | |
| CCAAGAGCTTCTTGACGCTG+TGG | - | chr2_2:11656126-11656145 | Msa0238250:intron | 55.0% | |
| AGAGCTTCTTGACGCTGTGG+AGG | - | chr2_2:11656129-11656148 | Msa0238250:intron | 55.0% | |
| ACTAATTCTCGGGCCCCCTT+TGG | - | chr2_2:11656196-11656215 | Msa0238250:intron | 55.0% | |
| CAGAGAAGACAGGGATCGTC+TGG | - | chr2_2:11656448-11656467 | Msa0238250:intron | 55.0% | |
| CTCTCATCCTGAGGTGGTGA+TGG | + | chr2_2:11657103-11657122 | None:intergenic | 55.0% | |
| CATCACCACCTCAGGATGAG+AGG | - | chr2_2:11657101-11657120 | Msa0238250:intron | 55.0% | |
| GAAGTTCCCCCATTACGGAC+AGG | + | chr2_2:11657462-11657481 | None:intergenic | 55.0% | |
| ! | GTCCGTAATGGGGGAACTTC+AGG | - | chr2_2:11657462-11657481 | Msa0238250:intron | 55.0% |
| GTTCATGGAGGATCCCAGGA+GGG | + | chr2_2:11657855-11657874 | None:intergenic | 55.0% | |
| AGTTCATGGAGGATCCCAGG+AGG | + | chr2_2:11657856-11657875 | None:intergenic | 55.0% | |
| GACAGTTCATGGAGGATCCC+AGG | + | chr2_2:11657859-11657878 | None:intergenic | 55.0% | |
| GGAATCAGGGCCTGCTTGGA+TGG | - | chr2_2:11655202-11655221 | Msa0238250:intron | 60.0% | |
| ! | AGACAGGGATCGTCTGGAGC+AGG | - | chr2_2:11656454-11656473 | Msa0238250:intron | 60.0% |
| !! | GGACGAGCGTTGGCAGTTGA+TGG | + | chr2_2:11656583-11656602 | None:intergenic | 60.0% |
| AACTGCCAACGCTCGTCCTG+AGG | - | chr2_2:11656585-11656604 | Msa0238250:CDS | 60.0% | |
| TGCAACCTCAGGACGAGCGT+TGG | + | chr2_2:11656593-11656612 | None:intergenic | 60.0% | |
| GTCGGTGAGCTACCGCCAAC+TGG | + | chr2_2:11656550-11656569 | None:intergenic | 65.0% | |
| GCTGGCGAGTTCCACCGTGA+AGG | - | chr2_2:11657892-11657911 | Msa0238250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 11654448 | 11658684 | 11654448 | ID=Msa0238250;Name=Msa0238250 |
| chr2_2 | mRNA | 11654448 | 11658684 | 11654448 | ID=Msa0238250-mRNA-1;Parent=Msa0238250;Name=Msa0238250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=159|1|1|1|1|1|8|445|381 |
| chr2_2 | exon | 11654448 | 11654919 | 11654448 | ID=Msa0238250-mRNA-1:exon:5016;Parent=Msa0238250-mRNA-1 |
| chr2_2 | exon | 11655515 | 11655854 | 11655515 | ID=Msa0238250-mRNA-1:exon:5015;Parent=Msa0238250-mRNA-1 |
| chr2_2 | exon | 11655938 | 11656045 | 11655938 | ID=Msa0238250-mRNA-1:exon:5014;Parent=Msa0238250-mRNA-1 |
| chr2_2 | exon | 11656479 | 11656771 | 11656479 | ID=Msa0238250-mRNA-1:exon:5013;Parent=Msa0238250-mRNA-1 |
| chr2_2 | exon | 11656895 | 11657006 | 11656895 | ID=Msa0238250-mRNA-1:exon:5012;Parent=Msa0238250-mRNA-1 |
| chr2_2 | exon | 11657106 | 11657168 | 11657106 | ID=Msa0238250-mRNA-1:exon:5011;Parent=Msa0238250-mRNA-1 |
| chr2_2 | exon | 11657248 | 11657294 | 11657248 | ID=Msa0238250-mRNA-1:exon:5010;Parent=Msa0238250-mRNA-1 |
| chr2_2 | exon | 11658370 | 11658684 | 11658370 | ID=Msa0238250-mRNA-1:exon:5009;Parent=Msa0238250-mRNA-1 |
| chr2_2 | five_prime_UTR | 11658526 | 11658684 | 11658526 | ID=Msa0238250-mRNA-1:five_prime_utr;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11658370 | 11658525 | 11658370 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11657248 | 11657294 | 11657248 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11657106 | 11657168 | 11657106 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11656895 | 11657006 | 11656895 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11656479 | 11656771 | 11656479 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11655938 | 11656045 | 11655938 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11655515 | 11655854 | 11655515 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | CDS | 11654893 | 11654919 | 11654893 | ID=Msa0238250-mRNA-1:cds;Parent=Msa0238250-mRNA-1 |
| chr2_2 | three_prime_UTR | 11654448 | 11654892 | 11654448 | ID=Msa0238250-mRNA-1:three_prime_utr;Parent=Msa0238250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
