Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671740 | XP_003605064.2 | 96.154 | 286 | 11 | 0 | 10 | 295 | 1 | 286 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671740 | sp|P54168|YPGQ_BACSU | 35.945 | 217 | 104 | 7 | 79 | 287 | 4 | 193 | 3.11e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671740 | G7JDD3 | 96.154 | 286 | 11 | 0 | 10 | 295 | 1 | 286 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa0671740 | 0.812003 | 5.274711e-51 | -8.615850e-47 |
| Msa0013050 | Msa0671740 | -0.845321 | 4.367891e-59 | -8.615850e-47 |
| Msa0023000 | Msa0671740 | 0.801804 | 7.575996e-49 | -8.615850e-47 |
| Msa0030380 | Msa0671740 | 0.826574 | 2.517138e-54 | -8.615850e-47 |
| Msa0032580 | Msa0671740 | 0.804568 | 2.029729e-49 | -8.615850e-47 |
| Msa0032610 | Msa0671740 | 0.833606 | 4.843440e-56 | -8.615850e-47 |
| Msa0036160 | Msa0671740 | 0.817333 | 3.481360e-52 | -8.615850e-47 |
| Msa0044710 | Msa0671740 | 0.829966 | 3.828964e-55 | -8.615850e-47 |
| Msa0052770 | Msa0671740 | 0.803306 | 3.713169e-49 | -8.615850e-47 |
| Msa0067150 | Msa0671740 | 0.804441 | 2.157170e-49 | -8.615850e-47 |
| Msa0071240 | Msa0671740 | 0.801322 | 9.510966e-49 | -8.615850e-47 |
| Msa0091010 | Msa0671740 | 0.814500 | 1.492378e-51 | -8.615850e-47 |
| Msa0119850 | Msa0671740 | 0.844122 | 9.189998e-59 | -8.615850e-47 |
| Msa0605170 | Msa0671740 | 0.804386 | 2.214455e-49 | -8.615850e-47 |
| Msa0607340 | Msa0671740 | -0.843233 | 1.589088e-58 | -8.615850e-47 |
| Msa0618010 | Msa0671740 | 0.830256 | 3.253975e-55 | -8.615850e-47 |
| Msa0621120 | Msa0671740 | 0.804966 | 1.676104e-49 | -8.615850e-47 |
| Msa0632870 | Msa0671740 | 0.902258 | 1.164536e-78 | -8.615850e-47 |
| Msa0638280 | Msa0671740 | 0.807596 | 4.680087e-50 | -8.615850e-47 |
| Msa0647450 | Msa0671740 | -0.816156 | 6.395740e-52 | -8.615850e-47 |
| Msa0660490 | Msa0671740 | 0.824863 | 6.410647e-54 | -8.615850e-47 |
| Msa0661190 | Msa0671740 | -0.805319 | 1.413806e-49 | -8.615850e-47 |
| Msa0671740 | Msa0672120 | 0.820014 | 8.579845e-53 | -8.615850e-47 |
| Msa0671740 | Msa0684180 | -0.804579 | 2.018831e-49 | -8.615850e-47 |
| Msa0671740 | Msa0688960 | 0.804223 | 2.395071e-49 | -8.615850e-47 |
| Msa0671740 | Msa0705420 | 0.830761 | 2.448028e-55 | -8.615850e-47 |
| Msa0671740 | Msa0715650 | 0.815407 | 9.392876e-52 | -8.615850e-47 |
| Msa0671740 | Msa0772480 | 0.812870 | 3.410810e-51 | -8.615850e-47 |
| Msa0671740 | Msa0784860 | 0.857426 | 1.645661e-62 | -8.615850e-47 |
| Msa0671740 | Msa0795920 | 0.842867 | 1.988873e-58 | -8.615850e-47 |
| Msa0671740 | Msa0798440 | 0.831819 | 1.344333e-55 | -8.615850e-47 |
| Msa0671740 | Msa0813720 | 0.810100 | 1.363311e-50 | -8.615850e-47 |
| Msa0671740 | Msa0817730 | 0.803552 | 3.301846e-49 | -8.615850e-47 |
| Msa0671740 | Msa0842210 | 0.824665 | 7.137327e-54 | -8.615850e-47 |
| Msa0671740 | Msa0858180 | 0.805460 | 1.320566e-49 | -8.615850e-47 |
| Msa0671740 | Msa0869120 | 0.801675 | 8.052275e-49 | -8.615850e-47 |
| Msa0671740 | Msa0870150 | 0.847077 | 1.452213e-59 | -8.615850e-47 |
| Msa0671740 | Msa0926850 | 0.801419 | 9.086621e-49 | -8.615850e-47 |
| Msa0671740 | Msa0933290 | 0.836250 | 1.044619e-56 | -8.615850e-47 |
| Msa0671740 | Msa0935850 | 0.813615 | 2.339635e-51 | -8.615850e-47 |
| Msa0671740 | Msa0949600 | 0.819326 | 1.231498e-52 | -8.615850e-47 |
| Msa0671740 | Msa1012830 | 0.828154 | 1.052461e-54 | -8.615850e-47 |
| Msa0671740 | Msa1051200 | 0.837054 | 6.518191e-57 | -8.615850e-47 |
| Msa0671740 | Msa1072460 | -0.817591 | 3.045169e-52 | -8.615850e-47 |
| Msa0671740 | Msa1084470 | 0.802850 | 4.612886e-49 | -8.615850e-47 |
| Msa0671740 | Msa1132890 | 0.813009 | 3.179137e-51 | -8.615850e-47 |
| Msa0671740 | Msa1137700 | 0.823848 | 1.110383e-53 | -8.615850e-47 |
| Msa0671740 | Msa1143930 | -0.830602 | 2.676827e-55 | -8.615850e-47 |
| Msa0671740 | Msa1171870 | 0.818488 | 1.910076e-52 | -8.615850e-47 |
| Msa0671740 | Msa1173140 | 0.800614 | 1.327017e-48 | -8.615850e-47 |
| Msa0671740 | Msa1211890 | 0.804736 | 1.871811e-49 | -8.615850e-47 |
| Msa0671740 | Msa1212760 | 0.842669 | 2.245698e-58 | -8.615850e-47 |
| Msa0671740 | Msa1212980 | 0.808190 | 3.497739e-50 | -8.615850e-47 |
| Msa0671740 | Msa1217430 | -0.805685 | 1.184532e-49 | -8.615850e-47 |
| Msa0671740 | Msa1234690 | 0.801878 | 7.313219e-49 | -8.615850e-47 |
| Msa0671740 | Msa1234730 | 0.804262 | 2.350377e-49 | -8.615850e-47 |
| Msa0671740 | Msa1260130 | 0.883284 | 5.110918e-71 | -8.615850e-47 |
| Msa0671740 | Msa1262920 | 0.849278 | 3.583226e-60 | -8.615850e-47 |
| Msa0671740 | Msa1300050 | 0.873888 | 1.036607e-67 | -8.615850e-47 |
| Msa0671740 | Msa1302100 | 0.858716 | 6.807220e-63 | -8.615850e-47 |
| Msa0671740 | Msa1302190 | -0.839106 | 1.931649e-57 | -8.615850e-47 |
| Msa0671740 | Msa1306430 | 0.811025 | 8.606592e-51 | -8.615850e-47 |
| Msa0671740 | Msa1315110 | 0.808302 | 3.310661e-50 | -8.615850e-47 |
| Msa0671740 | Msa1328700 | 0.803874 | 2.831018e-49 | -8.615850e-47 |
| Msa0671740 | Msa1336950 | 0.801931 | 7.133321e-49 | -8.615850e-47 |
| Msa0671740 | Msa1342640 | -0.807148 | 5.823675e-50 | -8.615850e-47 |
| Msa0671740 | Msa1359630 | 0.805246 | 1.464133e-49 | -8.615850e-47 |
| Msa0671740 | Msa1387200 | 0.800575 | 1.351605e-48 | -8.615850e-47 |
| Msa0671740 | Msa1390180 | 0.812263 | 4.629758e-51 | -8.615850e-47 |
| Msa0671740 | Msa1391490 | 0.827907 | 1.206772e-54 | -8.615850e-47 |
| Msa0671740 | Msa1398800 | 0.830792 | 2.405653e-55 | -8.615850e-47 |
| Msa0671740 | Msa1419800 | -0.816531 | 5.269969e-52 | -8.615850e-47 |
| Msa0671740 | Msa1427830 | 0.811501 | 6.784894e-51 | -8.615850e-47 |
| Msa0671740 | Msa1432400 | 0.824809 | 6.599349e-54 | -8.615850e-47 |
| Msa0671740 | Msa1439530 | 0.817425 | 3.320349e-52 | -8.615850e-47 |
| Msa0671740 | Msa1440000 | 0.812128 | 4.954370e-51 | -8.615850e-47 |
| Msa0671740 | Msa1453620 | 0.844404 | 7.722587e-59 | -8.615850e-47 |
| Msa0671740 | Msa1453780 | -0.811948 | 5.422599e-51 | -8.615850e-47 |
| Msa0671740 | Msa1454110 | 0.811928 | 5.477970e-51 | -8.615850e-47 |
| Msa0671740 | Msa1465960 | 0.856801 | 2.515454e-62 | -8.615850e-47 |
| Msa0142420 | Msa0671740 | 0.831510 | 1.602946e-55 | -8.615850e-47 |
| Msa0156650 | Msa0671740 | -0.805208 | 1.491542e-49 | -8.615850e-47 |
| Msa0160550 | Msa0671740 | 0.835660 | 1.474326e-56 | -8.615850e-47 |
| Msa0162770 | Msa0671740 | -0.808393 | 3.166897e-50 | -8.615850e-47 |
| Msa0172780 | Msa0671740 | 0.814432 | 1.545095e-51 | -8.615850e-47 |
| Msa0172970 | Msa0671740 | 0.800416 | 1.456397e-48 | -8.615850e-47 |
| Msa0173740 | Msa0671740 | 0.830644 | 2.615535e-55 | -8.615850e-47 |
| Msa0173820 | Msa0671740 | 0.830990 | 2.151299e-55 | -8.615850e-47 |
| Msa0173830 | Msa0671740 | 0.814719 | 1.335390e-51 | -8.615850e-47 |
| Msa0200950 | Msa0671740 | -0.806131 | 9.548842e-50 | -8.615850e-47 |
| Msa0238250 | Msa0671740 | -0.824840 | 6.490711e-54 | -8.615850e-47 |
| Msa0369220 | Msa0671740 | 0.819751 | 9.853811e-53 | -8.615850e-47 |
| Msa0372340 | Msa0671740 | 0.829310 | 5.530072e-55 | -8.615850e-47 |
| Msa0379410 | Msa0671740 | 0.876051 | 1.898827e-68 | -8.615850e-47 |
| Msa0380040 | Msa0671740 | 0.824091 | 9.737163e-54 | -8.615850e-47 |
| Msa0388050 | Msa0671740 | 0.827620 | 1.414967e-54 | -8.615850e-47 |
| Msa0397540 | Msa0671740 | 0.813294 | 2.753658e-51 | -8.615850e-47 |
| Msa0399340 | Msa0671740 | 0.833972 | 3.922700e-56 | -8.615850e-47 |
| Msa0421780 | Msa0671740 | -0.819086 | 1.396813e-52 | -8.615850e-47 |
| Msa0429290 | Msa0671740 | 0.829827 | 4.140212e-55 | -8.615850e-47 |
| Msa0442200 | Msa0671740 | 0.813359 | 2.664289e-51 | -8.615850e-47 |
| Msa0465790 | Msa0671740 | 0.803345 | 3.643286e-49 | -8.615850e-47 |
| Msa0467900 | Msa0671740 | -0.823097 | 1.663453e-53 | -8.615850e-47 |
| Msa0475580 | Msa0671740 | 0.825300 | 5.054745e-54 | -8.615850e-47 |
| Msa0244270 | Msa0671740 | 0.803016 | 4.261980e-49 | -8.615850e-47 |
| Msa0258670 | Msa0671740 | -0.803034 | 4.227051e-49 | -8.615850e-47 |
| Msa0267310 | Msa0671740 | 0.825774 | 3.903002e-54 | -8.615850e-47 |
| Msa0338700 | Msa0671740 | -0.811117 | 8.219174e-51 | -8.615850e-47 |
| Msa0358170 | Msa0671740 | 0.846763 | 1.770059e-59 | -8.615850e-47 |
| Msa0504020 | Msa0671740 | 0.820116 | 8.128378e-53 | -8.615850e-47 |
| Msa0504450 | Msa0671740 | 0.817070 | 3.989584e-52 | -8.615850e-47 |
| Msa0508870 | Msa0671740 | 0.804955 | 1.684776e-49 | -8.615850e-47 |
| Msa0519220 | Msa0671740 | 0.845613 | 3.642085e-59 | -8.615850e-47 |
| Msa0536650 | Msa0671740 | 0.957051 | 6.885091e-115 | -8.615850e-47 |
| Msa0553220 | Msa0671740 | -0.841087 | 5.878783e-58 | -8.615850e-47 |
| Msa0580420 | Msa0671740 | 0.848357 | 6.452745e-60 | -8.615850e-47 |
| Msa0592720 | Msa0671740 | 0.938922 | 3.011965e-99 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671740 | MtrunA17_Chr4g0010791 | 96.154 | 286 | 11 | 0 | 10 | 295 | 1 | 286 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671740 | AT1G17330.1 | 77.523 | 218 | 49 | 0 | 78 | 295 | 5 | 222 | 2.70e-120 | 344 |
Find 74 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGCGAGGTGTGCAGTTTC+AGG | 0.216109 | 4_4:-15512511 | Msa0671740:CDS |
| TGAGGAGCTTCTCATGAAAA+TGG | 0.305518 | 4_4:+15510727 | None:intergenic |
| TTTGAAGATCATCAAAGAAA+TGG | 0.317424 | 4_4:-15511774 | Msa0671740:CDS |
| GCCAAGATCTGATCTATCTA+AGG | 0.320518 | 4_4:-15510787 | Msa0671740:CDS |
| GTTCACATCTTGTAAGTTGC+AGG | 0.325616 | 4_4:-15510301 | Msa0671740:three_prime_UTR |
| ACTGAACGGAGTCCAGAATT+TGG | 0.354191 | 4_4:-15511074 | Msa0671740:CDS |
| CTCATGATGCGGCACATGTT+TGG | 0.359860 | 4_4:-15512399 | Msa0671740:CDS |
| TCTTGGACAACACCAAATTC+TGG | 0.364335 | 4_4:+15511062 | None:intergenic |
| CTTGATGCTATTGGTGCTAT+AGG | 0.384019 | 4_4:-15511029 | Msa0671740:intron |
| TTCTATGCTTTCTGTCTGTA+AGG | 0.386317 | 4_4:-15513466 | Msa0671740:intron |
| GCTGCACTGCTCCATGATAT+AGG | 0.400352 | 4_4:-15512207 | Msa0671740:intron |
| TCCTTAGATAGATCAGATCT+TGG | 0.401064 | 4_4:+15510786 | None:intergenic |
| TTGGAGCATGAAGCATGAAT+TGG | 0.401195 | 4_4:+15510269 | None:intergenic |
| CTCTCCCTTGCCACCGAGGA+AGG | 0.423845 | 4_4:-15512358 | Msa0671740:CDS |
| TTGAAGATCATCAAAGAAAT+GGG | 0.433662 | 4_4:-15511773 | Msa0671740:intron |
| AAAGAGGAGGTGACGGGAAA+AGG | 0.434863 | 4_4:-15511101 | Msa0671740:CDS |
| AATTCAAATCATATATAGTC+TGG | 0.451175 | 4_4:+15510204 | None:intergenic |
| CATCAAGCCTATCAGCATCT+TGG | 0.454662 | 4_4:+15511045 | None:intergenic |
| ATTGCACGTTGCTTCACATT+CGG | 0.458789 | 4_4:-15510849 | Msa0671740:CDS |
| GGAGAGAAGGCACAAGTTCA+TGG | 0.459970 | 4_4:-15510481 | Msa0671740:CDS |
| GGCAAAGGAGGGCGGAGAGA+AGG | 0.460292 | 4_4:-15510494 | Msa0671740:CDS |
| CTCTTCTGACCCGCATTCCA+TGG | 0.460854 | 4_4:-15512332 | Msa0671740:CDS |
| GCTGATAGGCTTGATGCTAT+TGG | 0.472702 | 4_4:-15511038 | Msa0671740:CDS |
| GTGTTGTCCAAGATGCTGAT+AGG | 0.474522 | 4_4:-15511052 | Msa0671740:CDS |
| TCAGATCTTGGCAAAATAGC+AGG | 0.474774 | 4_4:+15510798 | None:intergenic |
| TCTTGAGGAAGAGGGAGTTG+AGG | 0.475838 | 4_4:-15511816 | Msa0671740:CDS |
| TCATCATATCTTTAAGCTTG+AGG | 0.493256 | 4_4:+15510709 | None:intergenic |
| TACGATAGTTACAATTTCCA+TGG | 0.496172 | 4_4:+15512315 | None:intergenic |
| ATGAATAATGAAAATATCTC+AGG | 0.497746 | 4_4:+15513567 | None:intergenic |
| ATGATGCGGCACATGTTTGG+AGG | 0.501839 | 4_4:-15512396 | Msa0671740:CDS |
| CACGTTGCTTCACATTCGGC+GGG | 0.506510 | 4_4:-15510845 | Msa0671740:CDS |
| ATAGCTGCTTACCTATATCA+TGG | 0.507019 | 4_4:+15512196 | None:intergenic |
| CATTAGTTTCTCTCAGTCAA+AGG | 0.514420 | 4_4:-15513531 | Msa0671740:five_prime_UTR |
| GTCAGAAGAGAGGCCTTCCT+CGG | 0.523559 | 4_4:+15512345 | None:intergenic |
| CATTTCAGGCTGGGCAAAGG+AGG | 0.525095 | 4_4:-15510506 | Msa0671740:intron |
| TCAAAGAGTTCTACGACGAA+TGG | 0.526682 | 4_4:-15510449 | Msa0671740:CDS |
| AATAAGAAAGGCTGAGGCGT+TGG | 0.532558 | 4_4:-15512452 | Msa0671740:CDS |
| AGAGGCCTTCCTCGGTGGCA+AGG | 0.535275 | 4_4:+15512353 | None:intergenic |
| ATTTCAGGCTGGGCAAAGGA+GGG | 0.541101 | 4_4:-15510505 | Msa0671740:intron |
| TTACAATTTCCATGGAATGC+GGG | 0.542408 | 4_4:+15512323 | None:intergenic |
| GAGGCCTTCCTCGGTGGCAA+GGG | 0.544423 | 4_4:+15512354 | None:intergenic |
| ATCCATTTCAGGCTGGGCAA+AGG | 0.545547 | 4_4:-15510509 | Msa0671740:intron |
| CATTGTAACAAGAGAGAGGA+TGG | 0.546483 | 4_4:-15512488 | Msa0671740:CDS |
| TCAAAACCAAGGACATTGCA+TGG | 0.551067 | 4_4:+15510230 | None:intergenic |
| TGGTTGAGAAAGCGATGAAA+GGG | 0.553284 | 4_4:-15512432 | Msa0671740:CDS |
| TTGGTTGAGAAAGCGATGAA+AGG | 0.561138 | 4_4:-15512433 | Msa0671740:CDS |
| CAAAACCAAGGACATTGCAT+GGG | 0.568978 | 4_4:+15510231 | None:intergenic |
| CGGTGGCAAGGGAGAGAGCA+AGG | 0.570258 | 4_4:+15512365 | None:intergenic |
| TCAGGCTGGGCAAAGGAGGG+CGG | 0.579737 | 4_4:-15510502 | Msa0671740:intron |
| GATCATATATTTCGCGAGCG+AGG | 0.585289 | 4_4:-15512525 | Msa0671740:CDS |
| TGATGCGGCACATGTTTGGA+GGG | 0.590520 | 4_4:-15512395 | Msa0671740:CDS |
| AAAGACGGACACAATAAGAA+AGG | 0.590777 | 4_4:-15512464 | Msa0671740:CDS |
| AAGAGAGAGGATGGAAAAGA+CGG | 0.591781 | 4_4:-15512479 | Msa0671740:CDS |
| ACAGACAGAAAGCATAGAAG+TGG | 0.592793 | 4_4:+15513470 | None:intergenic |
| GTTACAATTTCCATGGAATG+CGG | 0.593875 | 4_4:+15512322 | None:intergenic |
| TGCTCTCTCCCTTGCCACCG+AGG | 0.611184 | 4_4:-15512362 | Msa0671740:CDS |
| TGGAATGCGGGTCAGAAGAG+AGG | 0.617247 | 4_4:+15512335 | None:intergenic |
| CAGGCATTGTAACAAGAGAG+AGG | 0.619895 | 4_4:-15512492 | Msa0671740:CDS |
| AATAATGAAAATATCTCAGG+AGG | 0.622199 | 4_4:+15513570 | None:intergenic |
| GCACGTTGCTTCACATTCGG+CGG | 0.624085 | 4_4:-15510846 | Msa0671740:CDS |
| CATTCGGCGGGAGTAAGAAG+AGG | 0.625922 | 4_4:-15510833 | Msa0671740:CDS |
| GAGTTCTACGACGAATGGAA+CGG | 0.628121 | 4_4:-15510444 | Msa0671740:CDS |
| AAAACCAAGGACATTGCATG+GGG | 0.628488 | 4_4:+15510232 | None:intergenic |
| GGACACAATAAGAAAGGCTG+AGG | 0.631192 | 4_4:-15512458 | Msa0671740:CDS |
| GAATGACGCTTCTCATGATG+CGG | 0.637516 | 4_4:-15512410 | Msa0671740:CDS |
| ATTCGGCGGGAGTAAGAAGA+GGG | 0.649996 | 4_4:-15510832 | Msa0671740:CDS |
| TAAAGATATGATGAAAACCA+AGG | 0.666397 | 4_4:-15510700 | Msa0671740:intron |
| AGAAGAGAGGCCTTCCTCGG+TGG | 0.681062 | 4_4:+15512348 | None:intergenic |
| TAGTCTGGCCTTCAAAACCA+AGG | 0.683192 | 4_4:+15510219 | None:intergenic |
| CGGGAAAAGGAACTACTGAA+CGG | 0.693020 | 4_4:-15511088 | Msa0671740:CDS |
| TAGCATGCAAAACAAAACGC+AGG | 0.702388 | 4_4:+15513506 | None:intergenic |
| CAGGTGACTACAAATACCTG+AGG | 0.728521 | 4_4:-15512073 | Msa0671740:intron |
| GAGAAGGCACAAGTTCATGG+AGG | 0.729226 | 4_4:-15510478 | Msa0671740:CDS |
| AAACCAAGGACATTGCATGG+GGG | 0.759450 | 4_4:+15510233 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAATAAAGTAATATA+AGG | - | chr4_4:15512039-15512058 | Msa0671740:intron | 10.0% |
| !! | AAATAATAGTATAAAAACAG+AGG | + | chr4_4:15510305-15510324 | None:intergenic | 15.0% |
| !!! | ATAATTTCAAGTACTAATTT+AGG | - | chr4_4:15512156-15512175 | Msa0671740:intron | 15.0% |
| !! | TAATTTCCAATAAATAAACA+AGG | + | chr4_4:15512545-15512564 | None:intergenic | 15.0% |
| !! | ATGAATAATGAAAATATCTC+AGG | + | chr4_4:15510145-15510164 | None:intergenic | 20.0% |
| !!! | CAAAATAATCACTTTTGTTT+AGG | - | chr4_4:15510330-15510349 | Msa0671740:three_prime_UTR | 20.0% |
| !!! | ATTTATACTTTCTTTTCTAC+AGG | - | chr4_4:15510681-15510700 | Msa0671740:intron | 20.0% |
| !!! | ACTTTTCTAAGTTTTAACTA+CGG | - | chr4_4:15510961-15510980 | Msa0671740:intron | 20.0% |
| !!! | GATAATGGTAATATAGAAAT+AGG | + | chr4_4:15511427-15511446 | None:intergenic | 20.0% |
| !! | TATGAAGGTTAAAAAGATAA+TGG | + | chr4_4:15511442-15511461 | None:intergenic | 20.0% |
| !!! | TTATCTTTTTAACCTTCATA+TGG | - | chr4_4:15511442-15511461 | Msa0671740:intron | 20.0% |
| !! | ATTTATTAGCAAACTACAAT+TGG | + | chr4_4:15511598-15511617 | None:intergenic | 20.0% |
| !! | TGAACAAAATGAAAAACAAA+AGG | + | chr4_4:15511796-15511815 | None:intergenic | 20.0% |
| !! | TGATAATATAATCTGTTTCA+TGG | - | chr4_4:15512248-15512267 | Msa0671740:intron | 20.0% |
| !! | TTATACAAAAGATATGAGAA+GGG | + | chr4_4:15512433-15512452 | None:intergenic | 20.0% |
| !! | ATTATACAAAAGATATGAGA+AGG | + | chr4_4:15512434-15512453 | None:intergenic | 20.0% |
| !!! | ACTTATCCTTGTTTATTTAT+TGG | - | chr4_4:15512536-15512555 | Msa0671740:CDS | 20.0% |
| !!! | TTTTGGGTTAAAATTTGATA+GGG | + | chr4_4:15513060-15513079 | None:intergenic | 20.0% |
| !!! | TTTTTGGGTTAAAATTTGAT+AGG | + | chr4_4:15513061-15513080 | None:intergenic | 20.0% |
| !! | ACTTGTAAAAAAGACAAAAA+TGG | - | chr4_4:15513351-15513370 | Msa0671740:intron | 20.0% |
| !! | AATTCAAATCATATATAGTC+TGG | + | chr4_4:15513508-15513527 | None:intergenic | 20.0% |
| !! | ATTTTGTTAGAATGAATGTG+AGG | - | chr4_4:15510378-15510397 | Msa0671740:three_prime_UTR | 25.0% |
| ! | AATCCTAATACATTGAATCA+GGG | + | chr4_4:15510574-15510593 | None:intergenic | 25.0% |
| ! | TAATCCTAATACATTGAATC+AGG | + | chr4_4:15510575-15510594 | None:intergenic | 25.0% |
| ! | TGATTCAATGTATTAGGATT+AGG | - | chr4_4:15510574-15510593 | Msa0671740:intron | 25.0% |
| ! | TTATCATGAAGTTAAGAAGT+GGG | + | chr4_4:15510987-15511006 | None:intergenic | 25.0% |
| ! | TTTATCATGAAGTTAAGAAG+TGG | + | chr4_4:15510988-15511007 | None:intergenic | 25.0% |
| !!! | TGATTACTTTTTGACAAACA+TGG | - | chr4_4:15511063-15511082 | Msa0671740:CDS | 25.0% |
| !!! | GATTACTTTTTGACAAACAT+GGG | - | chr4_4:15511064-15511083 | Msa0671740:CDS | 25.0% |
| ! | GTAATATAGAAATAGGAAGA+AGG | + | chr4_4:15511420-15511439 | None:intergenic | 25.0% |
| ! | AAAATGGAAAAATGAGAATG+AGG | + | chr4_4:15511471-15511490 | None:intergenic | 25.0% |
| !!! | CATTCTCATTTTTCCATTTT+AGG | - | chr4_4:15511471-15511490 | Msa0671740:intron | 25.0% |
| ! | TATTTATACTTACTAACCTC+AGG | + | chr4_4:15511655-15511674 | None:intergenic | 25.0% |
| !! | AACTGTTGAAAATTTTCTTG+AGG | - | chr4_4:15511878-15511897 | Msa0671740:intron | 25.0% |
| ! | TTTGAAGATCATCAAAGAAA+TGG | - | chr4_4:15511935-15511954 | Msa0671740:intron | 25.0% |
| ! | TTGAAGATCATCAAAGAAAT+GGG | - | chr4_4:15511936-15511955 | Msa0671740:intron | 25.0% |
| ! | ACATGAAAAAGTAAGAACTT+AGG | + | chr4_4:15511999-15512018 | None:intergenic | 25.0% |
| ! | CTTTAATTAGAGAACAGAAA+AGG | + | chr4_4:15512097-15512116 | None:intergenic | 25.0% |
| !!! | TTAATTTTGATGCATGATCT+CGG | - | chr4_4:15512221-15512240 | Msa0671740:intron | 25.0% |
| ! | TATCCTATTGCTAGAAAATT+GGG | - | chr4_4:15512720-15512739 | Msa0671740:intron | 25.0% |
| ! | TAAAGATATGATGAAAACCA+AGG | - | chr4_4:15513009-15513028 | Msa0671740:CDS | 25.0% |
| ! | GGTCAATAAAATTATAGTAG+AGG | + | chr4_4:15513039-15513058 | None:intergenic | 25.0% |
| ! | TAGAATGAATGTGAGGTTTT+AGG | - | chr4_4:15510385-15510404 | Msa0671740:three_prime_UTR | 30.0% |
| ! | AGAATGAATGTGAGGTTTTA+GGG | - | chr4_4:15510386-15510405 | Msa0671740:three_prime_UTR | 30.0% |
| ! | AAAAGTGTGTACTGTGTAAA+AGG | - | chr4_4:15510412-15510431 | Msa0671740:three_prime_UTR | 30.0% |
| TAATGATACAAACATCCTCA+AGG | - | chr4_4:15510652-15510671 | Msa0671740:intron | 30.0% | |
| AGTATAAATCAAAAGCCTTG+AGG | + | chr4_4:15510670-15510689 | None:intergenic | 30.0% | |
| ! | TACTAAAGTTGCGTTTTTGT+TGG | - | chr4_4:15510705-15510724 | Msa0671740:CDS | 30.0% |
| ATAGCGAAATTTGAACAGTA+TGG | + | chr4_4:15510858-15510877 | None:intergenic | 30.0% | |
| ! | AATAATTTGAAACCAGCTTC+TGG | - | chr4_4:15511031-15511050 | Msa0671740:CDS | 30.0% |
| !! | AAGTTGAGTTGAGTTGAATT+AGG | - | chr4_4:15511090-15511109 | Msa0671740:CDS | 30.0% |
| TACGATAGTTACAATTTCCA+TGG | + | chr4_4:15511397-15511416 | None:intergenic | 30.0% | |
| ATAAAAAACCACACACTACA+CGG | + | chr4_4:15511560-15511579 | None:intergenic | 30.0% | |
| !! | TTTACTTTGTTGATAACTGC+AGG | - | chr4_4:15511617-15511636 | Msa0671740:intron | 30.0% |
| AGTATTAGCTCATATGAGAA+GGG | + | chr4_4:15511829-15511848 | None:intergenic | 30.0% | |
| !! | AGCTAATACTGTGTCATTTA+GGG | - | chr4_4:15511839-15511858 | Msa0671740:CDS | 30.0% |
| !!! | TCAACAGTTTTTTCTTCAGA+TGG | + | chr4_4:15511867-15511886 | None:intergenic | 30.0% |
| ! | TGAAAATTTTCTTGAGGAAG+AGG | - | chr4_4:15511884-15511903 | Msa0671740:intron | 30.0% |
| ! | GAAAATTTTCTTGAGGAAGA+GGG | - | chr4_4:15511885-15511904 | Msa0671740:intron | 30.0% |
| GTATAATTCCTTCCAAAAGT+TGG | - | chr4_4:15512447-15512466 | Msa0671740:CDS | 30.0% | |
| AGGATAAGTTGCAAACAAAA+TGG | + | chr4_4:15512525-15512544 | None:intergenic | 30.0% | |
| !! | CCTCTTTAAAACCTGAATAT+TGG | + | chr4_4:15512595-15512614 | None:intergenic | 30.0% |
| !!! | CCAATATTCAGGTTTTAAAG+AGG | - | chr4_4:15512592-15512611 | Msa0671740:intron | 30.0% |
| !!! | ATATTCAGGTTTTAAAGAGG+AGG | - | chr4_4:15512595-15512614 | Msa0671740:intron | 30.0% |
| GTATCCTATTGCTAGAAAAT+TGG | - | chr4_4:15512719-15512738 | Msa0671740:intron | 30.0% | |
| !! | ATTCCCAATTTTCTAGCAAT+AGG | + | chr4_4:15512726-15512745 | None:intergenic | 30.0% |
| GTCATAATTCTGCATTCAAA+GGG | + | chr4_4:15512753-15512772 | None:intergenic | 30.0% | |
| TGTCATAATTCTGCATTCAA+AGG | + | chr4_4:15512754-15512773 | None:intergenic | 30.0% | |
| ! | CTTTGTTTGCCTTCAATATT+AGG | - | chr4_4:15512836-15512855 | Msa0671740:intron | 30.0% |
| GGAAAAATACATGAACAAAG+AGG | - | chr4_4:15512943-15512962 | Msa0671740:intron | 30.0% | |
| TCATCATATCTTTAAGCTTG+AGG | + | chr4_4:15513003-15513022 | None:intergenic | 30.0% | |
| !!! | TTCACGCTTAGTCTTTTTTT+GGG | + | chr4_4:15513076-15513095 | None:intergenic | 30.0% |
| !!! | TTTCACGCTTAGTCTTTTTT+TGG | + | chr4_4:15513077-15513096 | None:intergenic | 30.0% |
| AAGAATGCAGCAGATAAATT+TGG | + | chr4_4:15513120-15513139 | None:intergenic | 30.0% | |
| TGATTTAAGCTATCCATTTC+AGG | - | chr4_4:15513189-15513208 | Msa0671740:intron | 30.0% | |
| ! | CATTAGTTTCTCTCAGTCAA+AGG | - | chr4_4:15510178-15510197 | Msa0671740:three_prime_UTR | 35.0% |
| TTCTATGCTTTCTGTCTGTA+AGG | - | chr4_4:15510243-15510262 | Msa0671740:three_prime_UTR | 35.0% | |
| TTTAAGGGTCTTGAAAACCT+TGG | - | chr4_4:15510474-15510493 | Msa0671740:CDS | 35.0% | |
| ACAACACTATGTTCAACTTG+TGG | - | chr4_4:15510894-15510913 | Msa0671740:intron | 35.0% | |
| !! | TGAGTTGAGTTGAATTAGGT+TGG | - | chr4_4:15511094-15511113 | Msa0671740:CDS | 35.0% |
| AAAGACGGACACAATAAGAA+AGG | - | chr4_4:15511245-15511264 | Msa0671740:intron | 35.0% | |
| TTACAATTTCCATGGAATGC+GGG | + | chr4_4:15511389-15511408 | None:intergenic | 35.0% | |
| GTTACAATTTCCATGGAATG+CGG | + | chr4_4:15511390-15511409 | None:intergenic | 35.0% | |
| ATAGCTGCTTACCTATATCA+TGG | + | chr4_4:15511516-15511535 | None:intergenic | 35.0% | |
| AGGTAAGCAGCTATAATTGT+AGG | - | chr4_4:15511522-15511541 | Msa0671740:intron | 35.0% | |
| GTATTAGCTCATATGAGAAG+GGG | + | chr4_4:15511828-15511847 | None:intergenic | 35.0% | |
| CAGTATTAGCTCATATGAGA+AGG | + | chr4_4:15511830-15511849 | None:intergenic | 35.0% | |
| !! | GAGCTAATACTGTGTCATTT+AGG | - | chr4_4:15511838-15511857 | Msa0671740:CDS | 35.0% |
| CATCAAAGAAATGGGTAAGT+TGG | - | chr4_4:15511944-15511963 | Msa0671740:intron | 35.0% | |
| TAAGAACTTAGGCAAGAAAC+TGG | + | chr4_4:15511988-15512007 | None:intergenic | 35.0% | |
| TTTGACATGACTTTCAAAGC+AGG | - | chr4_4:15512186-15512205 | Msa0671740:intron | 35.0% | |
| ACAAAAGATATGAGAAGGGT+AGG | + | chr4_4:15512429-15512448 | None:intergenic | 35.0% | |
| TAAGTTGCAAACAAAATGGC+AGG | + | chr4_4:15512521-15512540 | None:intergenic | 35.0% | |
| TGATGCTTCTTCCAATATTC+AGG | - | chr4_4:15512581-15512600 | Msa0671740:intron | 35.0% | |
| !! | CACGTTTTCATTTGAAGTGT+TGG | + | chr4_4:15512798-15512817 | None:intergenic | 35.0% |
| CGTGCAATTCCTAATATTGA+AGG | + | chr4_4:15512848-15512867 | None:intergenic | 35.0% | |
| TCCTTAGATAGATCAGATCT+TGG | + | chr4_4:15512926-15512945 | None:intergenic | 35.0% | |
| ! | ATTATAGTAGAGGTGTACCT+TGG | + | chr4_4:15513029-15513048 | None:intergenic | 35.0% |
| TGGGGGAAAAAATCTACATT+TGG | + | chr4_4:15513462-15513481 | None:intergenic | 35.0% | |
| TAGCATGCAAAACAAAACGC+AGG | + | chr4_4:15510206-15510225 | None:intergenic | 40.0% | |
| ! | ACAGACAGAAAGCATAGAAG+TGG | + | chr4_4:15510242-15510261 | None:intergenic | 40.0% |
| !! | AGGCTATGAGTTAGCCTTTA+TGG | - | chr4_4:15510432-15510451 | Msa0671740:exon | 40.0% |
| !! | CTATGAGTTAGCCTTTATGG+TGG | - | chr4_4:15510435-15510454 | Msa0671740:CDS | 40.0% |
| CAGCCCTGATTCAATGTATT+AGG | - | chr4_4:15510568-15510587 | Msa0671740:intron | 40.0% | |
| GCTAACACATGGACATCAAA+TGG | + | chr4_4:15510605-15510624 | None:intergenic | 40.0% | |
| ! | TGACAGTTCTGATTGTTTCG+TGG | - | chr4_4:15511123-15511142 | Msa0671740:intron | 40.0% |
| TTCTGATTGTTTCGTGGACT+AGG | - | chr4_4:15511129-15511148 | Msa0671740:intron | 40.0% | |
| ! | TCTGATTGTTTCGTGGACTA+GGG | - | chr4_4:15511130-15511149 | Msa0671740:intron | 40.0% |
| CATTGTAACAAGAGAGAGGA+TGG | - | chr4_4:15511221-15511240 | Msa0671740:intron | 40.0% | |
| AAGAGAGAGGATGGAAAAGA+CGG | - | chr4_4:15511230-15511249 | Msa0671740:intron | 40.0% | |
| TTGGTTGAGAAAGCGATGAA+AGG | - | chr4_4:15511276-15511295 | Msa0671740:intron | 40.0% | |
| TGGTTGAGAAAGCGATGAAA+GGG | - | chr4_4:15511277-15511296 | Msa0671740:intron | 40.0% | |
| ! | AGTGTTGTTAGCCAACTTCA+AGG | - | chr4_4:15511746-15511765 | Msa0671740:intron | 40.0% |
| AAACAACCAAGCCTTGAAGT+TGG | + | chr4_4:15511760-15511779 | None:intergenic | 40.0% | |
| AGTACTATCCCTGATGATCA+TGG | - | chr4_4:15512397-15512416 | Msa0671740:CDS | 40.0% | |
| AAGATATGAGAAGGGTAGGA+AGG | + | chr4_4:15512425-15512444 | None:intergenic | 40.0% | |
| !!! | AGGTTTTAAAGAGGAGGTGA+CGG | - | chr4_4:15512601-15512620 | Msa0671740:intron | 40.0% |
| TCTTGGACAACACCAAATTC+TGG | + | chr4_4:15512650-15512669 | None:intergenic | 40.0% | |
| !! | CTTGATGCTATTGGTGCTAT+AGG | - | chr4_4:15512680-15512699 | Msa0671740:intron | 40.0% |
| AGAATTATGACAGCTCTTCG+AGG | - | chr4_4:15512762-15512781 | Msa0671740:intron | 40.0% | |
| ATTGCACGTTGCTTCACATT+CGG | - | chr4_4:15512860-15512879 | Msa0671740:intron | 40.0% | |
| TCAGATCTTGGCAAAATAGC+AGG | + | chr4_4:15512914-15512933 | None:intergenic | 40.0% | |
| GCCAAGATCTGATCTATCTA+AGG | - | chr4_4:15512922-15512941 | Msa0671740:intron | 40.0% | |
| TGAGGAGCTTCTCATGAAAA+TGG | + | chr4_4:15512985-15513004 | None:intergenic | 40.0% | |
| TTAAGCTATCCATTTCAGGC+TGG | - | chr4_4:15513193-15513212 | Msa0671740:intron | 40.0% | |
| TAAGCTATCCATTTCAGGCT+GGG | - | chr4_4:15513194-15513213 | Msa0671740:intron | 40.0% | |
| TCAAAGAGTTCTACGACGAA+TGG | - | chr4_4:15513260-15513279 | Msa0671740:intron | 40.0% | |
| GTTCACATCTTGTAAGTTGC+AGG | - | chr4_4:15513408-15513427 | Msa0671740:intron | 40.0% | |
| TTGGAGCATGAAGCATGAAT+TGG | + | chr4_4:15513443-15513462 | None:intergenic | 40.0% | |
| AAAACCAAGGACATTGCATG+GGG | + | chr4_4:15513480-15513499 | None:intergenic | 40.0% | |
| CAAAACCAAGGACATTGCAT+GGG | + | chr4_4:15513481-15513500 | None:intergenic | 40.0% | |
| TCAAAACCAAGGACATTGCA+TGG | + | chr4_4:15513482-15513501 | None:intergenic | 40.0% | |
| !!! | TGCAATGTCCTTGGTTTTGA+AGG | - | chr4_4:15513482-15513501 | Msa0671740:CDS | 40.0% |
| AGCCTTTATGGTGGTCAATC+AGG | - | chr4_4:15510444-15510463 | Msa0671740:CDS | 45.0% | |
| GCCTTTATGGTGGTCAATCA+GGG | - | chr4_4:15510445-15510464 | Msa0671740:CDS | 45.0% | |
| TCCCTGATTGACCACCATAA+AGG | + | chr4_4:15510449-15510468 | None:intergenic | 45.0% | |
| TCAATCAGGGACAGGGTTTA+AGG | - | chr4_4:15510458-15510477 | Msa0671740:CDS | 45.0% | |
| CAATCAGGGACAGGGTTTAA+GGG | - | chr4_4:15510459-15510478 | Msa0671740:CDS | 45.0% | |
| GATGTCCATGTGTTAGCTAC+TGG | - | chr4_4:15510608-15510627 | Msa0671740:intron | 45.0% | |
| CTAAGCCAGTAGCTAACACA+TGG | + | chr4_4:15510616-15510635 | None:intergenic | 45.0% | |
| !! | CATGTGTTAGCTACTGGCTT+AGG | - | chr4_4:15510614-15510633 | Msa0671740:intron | 45.0% |
| TCAAAAGCTAGACCAGAAGC+TGG | + | chr4_4:15511046-15511065 | None:intergenic | 45.0% | |
| GATCATATATTTCGCGAGCG+AGG | - | chr4_4:15511184-15511203 | Msa0671740:intron | 45.0% | |
| ! | CAGGCATTGTAACAAGAGAG+AGG | - | chr4_4:15511217-15511236 | Msa0671740:intron | 45.0% |
| GGACACAATAAGAAAGGCTG+AGG | - | chr4_4:15511251-15511270 | Msa0671740:intron | 45.0% | |
| AATAAGAAAGGCTGAGGCGT+TGG | - | chr4_4:15511257-15511276 | Msa0671740:intron | 45.0% | |
| GAATGACGCTTCTCATGATG+CGG | - | chr4_4:15511299-15511318 | Msa0671740:intron | 45.0% | |
| AGAATGAGGCGACCATATGA+AGG | + | chr4_4:15511457-15511476 | None:intergenic | 45.0% | |
| GCAGCAAGCTCTACCTAAAA+TGG | + | chr4_4:15511487-15511506 | None:intergenic | 45.0% | |
| ATTCTTGTCCGTGTAGTGTG+TGG | - | chr4_4:15511549-15511568 | Msa0671740:intron | 45.0% | |
| CAGGTGACTACAAATACCTG+AGG | - | chr4_4:15511636-15511655 | Msa0671740:intron | 45.0% | |
| TGTTAGCCAACTTCAAGGCT+TGG | - | chr4_4:15511751-15511770 | Msa0671740:intron | 45.0% | |
| GGAAGGAACCATGATCATCA+GGG | + | chr4_4:15512408-15512427 | None:intergenic | 45.0% | |
| AGGAAGGAACCATGATCATC+AGG | + | chr4_4:15512409-15512428 | None:intergenic | 45.0% | |
| ! | TTCAAAGACGCGCCAACTTT+TGG | + | chr4_4:15512462-15512481 | None:intergenic | 45.0% |
| !!! | GGTTTTAAAGAGGAGGTGAC+GGG | - | chr4_4:15512602-15512621 | Msa0671740:intron | 45.0% |
| CGGGAAAAGGAACTACTGAA+CGG | - | chr4_4:15512621-15512640 | Msa0671740:intron | 45.0% | |
| ACTGAACGGAGTCCAGAATT+TGG | - | chr4_4:15512635-15512654 | Msa0671740:intron | 45.0% | |
| GTGTTGTCCAAGATGCTGAT+AGG | - | chr4_4:15512657-15512676 | Msa0671740:intron | 45.0% | |
| CATCAAGCCTATCAGCATCT+TGG | + | chr4_4:15512667-15512686 | None:intergenic | 45.0% | |
| GCTGATAGGCTTGATGCTAT+TGG | - | chr4_4:15512671-15512690 | Msa0671740:intron | 45.0% | |
| GAGTTCTACGACGAATGGAA+CGG | - | chr4_4:15513265-15513284 | Msa0671740:intron | 45.0% | |
| AAACCAAGGACATTGCATGG+GGG | + | chr4_4:15513479-15513498 | None:intergenic | 45.0% | |
| ! | TAGTCTGGCCTTCAAAACCA+AGG | + | chr4_4:15513493-15513512 | None:intergenic | 45.0% |
| TATGGTGGTCAATCAGGGAC+AGG | - | chr4_4:15510450-15510469 | Msa0671740:CDS | 50.0% | |
| ATGGTGGTCAATCAGGGACA+GGG | - | chr4_4:15510451-15510470 | Msa0671740:CDS | 50.0% | |
| GGGTCTTGAAAACCTTGGTC+TGG | - | chr4_4:15510479-15510498 | Msa0671740:CDS | 50.0% | |
| TGGACACTTGTGAGCAGATC+AGG | - | chr4_4:15510499-15510518 | Msa0671740:CDS | 50.0% | |
| GGACACTTGTGAGCAGATCA+GGG | - | chr4_4:15510500-15510519 | Msa0671740:CDS | 50.0% | |
| AGATCAGGGTTGTGCCATCT+AGG | - | chr4_4:15510514-15510533 | Msa0671740:intron | 50.0% | |
| ! | GGGTTGTGCCATCTAGGATT+CGG | - | chr4_4:15510520-15510539 | Msa0671740:intron | 50.0% |
| ! | GTGCCATCTAGGATTCGGAA+TGG | - | chr4_4:15510525-15510544 | Msa0671740:intron | 50.0% |
| CGTCCATTCCGAATCCTAGA+TGG | + | chr4_4:15510531-15510550 | None:intergenic | 50.0% | |
| !!! | TGCGTTTTTGTTGGCTCGAG+TGG | - | chr4_4:15510714-15510733 | Msa0671740:CDS | 50.0% |
| !!! | GCGTTTTTGTTGGCTCGAGT+GGG | - | chr4_4:15510715-15510734 | Msa0671740:CDS | 50.0% |
| CTCATGATGCGGCACATGTT+TGG | - | chr4_4:15511310-15511329 | Msa0671740:intron | 50.0% | |
| ATGATGCGGCACATGTTTGG+AGG | - | chr4_4:15511313-15511332 | Msa0671740:intron | 50.0% | |
| TGATGCGGCACATGTTTGGA+GGG | - | chr4_4:15511314-15511333 | Msa0671740:intron | 50.0% | |
| GCTGCACTGCTCCATGATAT+AGG | - | chr4_4:15511502-15511521 | Msa0671740:intron | 50.0% | |
| TCTTGAGGAAGAGGGAGTTG+AGG | - | chr4_4:15511893-15511912 | Msa0671740:intron | 50.0% | |
| ! | AAGACGCGCCAACTTTTGGA+AGG | + | chr4_4:15512458-15512477 | None:intergenic | 50.0% |
| !! | AAAGAGGAGGTGACGGGAAA+AGG | - | chr4_4:15512608-15512627 | Msa0671740:intron | 50.0% |
| ATTCGGCGGGAGTAAGAAGA+GGG | - | chr4_4:15512877-15512896 | Msa0671740:intron | 50.0% | |
| ATCCATTTCAGGCTGGGCAA+AGG | - | chr4_4:15513200-15513219 | Msa0671740:intron | 50.0% | |
| ATTTCAGGCTGGGCAAAGGA+GGG | - | chr4_4:15513204-15513223 | Msa0671740:intron | 50.0% | |
| ! | GGAGAGAAGGCACAAGTTCA+TGG | - | chr4_4:15513228-15513247 | Msa0671740:intron | 50.0% |
| ! | GAGAAGGCACAAGTTCATGG+AGG | - | chr4_4:15513231-15513250 | Msa0671740:intron | 50.0% |
| TTTCCCCCATGCAATGTCCT+TGG | - | chr4_4:15513473-15513492 | Msa0671740:CDS | 50.0% | |
| GCTCACAAGTGTCCAGACCA+AGG | + | chr4_4:15510494-15510513 | None:intergenic | 55.0% | |
| GTCAGAAGAGAGGCCTTCCT+CGG | + | chr4_4:15511367-15511386 | None:intergenic | 55.0% | |
| TGGAATGCGGGTCAGAAGAG+AGG | + | chr4_4:15511377-15511396 | None:intergenic | 55.0% | |
| CTCTTCTGACCCGCATTCCA+TGG | - | chr4_4:15511377-15511396 | Msa0671740:intron | 55.0% | |
| GCACGTTGCTTCACATTCGG+CGG | - | chr4_4:15512863-15512882 | Msa0671740:intron | 55.0% | |
| CACGTTGCTTCACATTCGGC+GGG | - | chr4_4:15512864-15512883 | Msa0671740:intron | 55.0% | |
| CATTCGGCGGGAGTAAGAAG+AGG | - | chr4_4:15512876-15512895 | Msa0671740:intron | 55.0% | |
| CTCCTTTGCCCAGCCTGAAA+TGG | + | chr4_4:15513205-15513224 | None:intergenic | 55.0% | |
| CATTTCAGGCTGGGCAAAGG+AGG | - | chr4_4:15513203-15513222 | Msa0671740:intron | 55.0% | |
| CGAGCGAGGTGTGCAGTTTC+AGG | - | chr4_4:15511198-15511217 | Msa0671740:intron | 60.0% | |
| AGAAGAGAGGCCTTCCTCGG+TGG | + | chr4_4:15511364-15511383 | None:intergenic | 60.0% | |
| CGGTGGCAAGGGAGAGAGCA+AGG | + | chr4_4:15511347-15511366 | None:intergenic | 65.0% | |
| TGCTCTCTCCCTTGCCACCG+AGG | - | chr4_4:15511347-15511366 | Msa0671740:intron | 65.0% | |
| CTCTCCCTTGCCACCGAGGA+AGG | - | chr4_4:15511351-15511370 | Msa0671740:intron | 65.0% | |
| GAGGCCTTCCTCGGTGGCAA+GGG | + | chr4_4:15511358-15511377 | None:intergenic | 65.0% | |
| AGAGGCCTTCCTCGGTGGCA+AGG | + | chr4_4:15511359-15511378 | None:intergenic | 65.0% | |
| TCAGGCTGGGCAAAGGAGGG+CGG | - | chr4_4:15513207-15513226 | Msa0671740:intron | 65.0% | |
| GGCAAAGGAGGGCGGAGAGA+AGG | - | chr4_4:15513215-15513234 | Msa0671740:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 15510142 | 15513589 | 15510142 | ID=Msa0671740;Name=Msa0671740 |
| chr4_4 | mRNA | 15510142 | 15513589 | 15510142 | ID=Msa0671740-mRNA-1;Parent=Msa0671740;Name=Msa0671740-mRNA-1;_AED=0.09;_eAED=0.09;_QI=78|1|1|1|1|1|9|292|295 |
| chr4_4 | exon | 15510142 | 15510520 | 15510142 | ID=Msa0671740-mRNA-1:exon:4744;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15510701 | 15510873 | 15510701 | ID=Msa0671740-mRNA-1:exon:4743;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15511030 | 15511128 | 15511030 | ID=Msa0671740-mRNA-1:exon:4742;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15511774 | 15511871 | 15511774 | ID=Msa0671740-mRNA-1:exon:4741;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15512074 | 15512092 | 15512074 | ID=Msa0671740-mRNA-1:exon:4740;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15512208 | 15512238 | 15512208 | ID=Msa0671740-mRNA-1:exon:4739;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15512327 | 15512580 | 15512327 | ID=Msa0671740-mRNA-1:exon:4738;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15512947 | 15513028 | 15512947 | ID=Msa0671740-mRNA-1:exon:4737;Parent=Msa0671740-mRNA-1 |
| chr4_4 | exon | 15513467 | 15513589 | 15513467 | ID=Msa0671740-mRNA-1:exon:4736;Parent=Msa0671740-mRNA-1 |
| chr4_4 | five_prime_UTR | 15513512 | 15513589 | 15513512 | ID=Msa0671740-mRNA-1:five_prime_utr;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15513467 | 15513511 | 15513467 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15512947 | 15513028 | 15512947 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15512327 | 15512580 | 15512327 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15512208 | 15512238 | 15512208 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15512074 | 15512092 | 15512074 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15511774 | 15511871 | 15511774 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15511030 | 15511128 | 15511030 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15510701 | 15510873 | 15510701 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | CDS | 15510434 | 15510520 | 15510434 | ID=Msa0671740-mRNA-1:cds;Parent=Msa0671740-mRNA-1 |
| chr4_4 | three_prime_UTR | 15510142 | 15510433 | 15510142 | ID=Msa0671740-mRNA-1:three_prime_utr;Parent=Msa0671740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
