Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389780 | XP_003592185.2 | 97.024 | 336 | 10 | 0 | 1 | 336 | 61 | 396 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389780 | sp|Q9FLY0|SARD4_ARATH | 63.158 | 323 | 117 | 1 | 11 | 333 | 1 | 321 | 2.51e-142 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389780 | A0A396K131 | 97.024 | 336 | 10 | 0 | 1 | 336 | 61 | 396 | 0.0 | 671 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1389780 | -0.805668 | 1.194320e-49 | -8.615850e-47 |
| Msa0005350 | Msa1389780 | 0.811982 | 5.330967e-51 | -8.615850e-47 |
| Msa0023830 | Msa1389780 | -0.809177 | 2.152919e-50 | -8.615850e-47 |
| Msa0069260 | Msa1389780 | 0.822638 | 2.127968e-53 | -8.615850e-47 |
| Msa0069280 | Msa1389780 | 0.821883 | 3.185514e-53 | -8.615850e-47 |
| Msa0069310 | Msa1389780 | 0.825147 | 5.492771e-54 | -8.615850e-47 |
| Msa0099730 | Msa1389780 | 0.802991 | 4.314338e-49 | -8.615850e-47 |
| Msa1389780 | Msa1403930 | -0.810019 | 1.419560e-50 | -8.615850e-47 |
| Msa1389780 | Msa1412080 | 0.800735 | 1.253352e-48 | -8.615850e-47 |
| Msa1389780 | Msa1417830 | -0.802418 | 5.664486e-49 | -8.615850e-47 |
| Msa1389780 | Msa1419110 | 0.811130 | 8.165666e-51 | -8.615850e-47 |
| Msa1389780 | Msa1427830 | 0.800291 | 1.543941e-48 | -8.615850e-47 |
| Msa1389780 | Msa1432640 | 0.818080 | 2.362515e-52 | -8.615850e-47 |
| Msa1389780 | Msa1439230 | 0.819287 | 1.257248e-52 | -8.615850e-47 |
| Msa1389780 | Msa1445420 | -0.803904 | 2.789503e-49 | -8.615850e-47 |
| Msa1389780 | Msa1454110 | 0.806817 | 6.842007e-50 | -8.615850e-47 |
| Msa1389780 | Msa1459760 | -0.818643 | 1.761484e-52 | -8.615850e-47 |
| Msa0607290 | Msa1389780 | -0.812046 | 5.163558e-51 | -8.615850e-47 |
| Msa0618010 | Msa1389780 | 0.810940 | 8.977640e-51 | -8.615850e-47 |
| Msa0622340 | Msa1389780 | 0.809143 | 2.189344e-50 | -8.615850e-47 |
| Msa0647450 | Msa1389780 | -0.822425 | 2.385551e-53 | -8.615850e-47 |
| Msa0669850 | Msa1389780 | 0.835625 | 1.504684e-56 | -8.615850e-47 |
| Msa0743260 | Msa1389780 | 0.812064 | 5.115786e-51 | -8.615850e-47 |
| Msa0791820 | Msa1389780 | 0.813065 | 3.090460e-51 | -8.615850e-47 |
| Msa0145950 | Msa1389780 | 0.807547 | 4.792901e-50 | -8.615850e-47 |
| Msa0148120 | Msa1389780 | 0.838466 | 2.827900e-57 | -8.615850e-47 |
| Msa0156650 | Msa1389780 | -0.826769 | 2.261393e-54 | -8.615850e-47 |
| Msa0162770 | Msa1389780 | -0.815709 | 8.046338e-52 | -8.615850e-47 |
| Msa0168640 | Msa1389780 | -0.809270 | 2.055488e-50 | -8.615850e-47 |
| Msa0172350 | Msa1389780 | 0.809373 | 1.953888e-50 | -8.615850e-47 |
| Msa0194970 | Msa1389780 | 0.824256 | 8.906984e-54 | -8.615850e-47 |
| Msa0200950 | Msa1389780 | -0.809440 | 1.890497e-50 | -8.615850e-47 |
| Msa0223100 | Msa1389780 | 0.828397 | 9.199761e-55 | -8.615850e-47 |
| Msa0223290 | Msa1389780 | 0.834963 | 2.210898e-56 | -8.615850e-47 |
| Msa0223380 | Msa1389780 | 0.839198 | 1.828524e-57 | -8.615850e-47 |
| Msa1236070 | Msa1389780 | -0.830277 | 3.215343e-55 | -8.615850e-47 |
| Msa1267260 | Msa1389780 | 0.825529 | 4.461102e-54 | -8.615850e-47 |
| Msa1282920 | Msa1389780 | 0.809794 | 1.586460e-50 | -8.615850e-47 |
| Msa1303160 | Msa1389780 | 0.830987 | 2.154809e-55 | -8.615850e-47 |
| Msa1316560 | Msa1389780 | -0.806645 | 7.438637e-50 | -8.615850e-47 |
| Msa0377530 | Msa1389780 | 0.819017 | 1.447993e-52 | -8.615850e-47 |
| Msa0380040 | Msa1389780 | 0.806447 | 8.191247e-50 | -8.615850e-47 |
| Msa0419640 | Msa1389780 | -0.804146 | 2.484522e-49 | -8.615850e-47 |
| Msa0421780 | Msa1389780 | -0.803684 | 3.099543e-49 | -8.615850e-47 |
| Msa0426810 | Msa1389780 | 0.810343 | 1.208487e-50 | -8.615850e-47 |
| Msa0429290 | Msa1389780 | 0.811380 | 7.206974e-51 | -8.615850e-47 |
| Msa0440130 | Msa1389780 | -0.803256 | 3.802397e-49 | -8.615850e-47 |
| Msa0441800 | Msa1389780 | 0.806510 | 7.941314e-50 | -8.615850e-47 |
| Msa0467900 | Msa1389780 | -0.815265 | 1.009860e-51 | -8.615850e-47 |
| Msa0467960 | Msa1389780 | -0.814820 | 1.267879e-51 | -8.615850e-47 |
| Msa0473240 | Msa1389780 | 0.808218 | 3.450868e-50 | -8.615850e-47 |
| Msa0475580 | Msa1389780 | 0.812854 | 3.437713e-51 | -8.615850e-47 |
| Msa1015060 | Msa1389780 | 0.813891 | 2.034141e-51 | -8.615850e-47 |
| Msa1039880 | Msa1389780 | 0.800136 | 1.660215e-48 | -8.615850e-47 |
| Msa1072460 | Msa1389780 | -0.824895 | 6.300429e-54 | -8.615850e-47 |
| Msa1077670 | Msa1389780 | 0.808098 | 3.658674e-50 | -8.615850e-47 |
| Msa1092820 | Msa1389780 | 0.812578 | 3.950345e-51 | -8.615850e-47 |
| Msa1095480 | Msa1389780 | 0.806146 | 9.477564e-50 | -8.615850e-47 |
| Msa0267760 | Msa1389780 | 0.805171 | 1.518017e-49 | -8.615850e-47 |
| Msa0269450 | Msa1389780 | 0.804051 | 2.601090e-49 | -8.615850e-47 |
| Msa0275030 | Msa1389780 | 0.806394 | 8.404890e-50 | -8.615850e-47 |
| Msa0279210 | Msa1389780 | -0.804372 | 2.229976e-49 | -8.615850e-47 |
| Msa0288240 | Msa1389780 | 0.822393 | 2.426881e-53 | -8.615850e-47 |
| Msa0302650 | Msa1389780 | 0.814600 | 1.418439e-51 | -8.615850e-47 |
| Msa0326670 | Msa1389780 | 0.824950 | 6.113534e-54 | -8.615850e-47 |
| Msa0328210 | Msa1389780 | 0.805206 | 1.492701e-49 | -8.615850e-47 |
| Msa1126120 | Msa1389780 | -0.812647 | 3.816119e-51 | -8.615850e-47 |
| Msa1218650 | Msa1389780 | 0.815339 | 9.724842e-52 | -8.615850e-47 |
| Msa0517490 | Msa1389780 | 0.825336 | 4.954545e-54 | -8.615850e-47 |
| Msa0519220 | Msa1389780 | 0.812641 | 3.827029e-51 | -8.615850e-47 |
| Msa0526710 | Msa1389780 | 0.806017 | 1.009113e-49 | -8.615850e-47 |
| Msa0531990 | Msa1389780 | -0.815003 | 1.154615e-51 | -8.615850e-47 |
| Msa0532100 | Msa1389780 | -0.819332 | 1.227697e-52 | -8.615850e-47 |
| Msa0535030 | Msa1389780 | 0.828507 | 8.649632e-55 | -8.615850e-47 |
| Msa0535060 | Msa1389780 | 0.832438 | 9.453070e-56 | -8.615850e-47 |
| Msa0553220 | Msa1389780 | -0.833043 | 6.687702e-56 | -8.615850e-47 |
| Msa0583790 | Msa1389780 | 0.801406 | 9.139401e-49 | -8.615850e-47 |
| Msa0591060 | Msa1389780 | 0.802910 | 4.483484e-49 | -8.615850e-47 |
| Msa0591770 | Msa1389780 | 0.820301 | 7.373869e-53 | -8.615850e-47 |
| Msa0874500 | Msa1389780 | 0.841889 | 3.613946e-58 | -8.615850e-47 |
| Msa0976250 | Msa1389780 | 0.808365 | 3.210611e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389780 | MtrunA17_Chr1g0202471 | 97.024 | 336 | 10 | 0 | 1 | 336 | 61 | 396 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1389780 | AT5G52810.1 | 63.158 | 323 | 117 | 1 | 11 | 333 | 1 | 321 | 2.55e-143 | 408 |
Find 88 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGAACCTCTTGTGTTTC+TGG | 0.038368 | tig0021300:+57970 | Msa1389780:CDS |
| TTGGATGAGGTTGTTGGATT+TGG | 0.201511 | tig0021300:+58219 | Msa1389780:CDS |
| TGGATGAGGTTGTTGGATTT+GGG | 0.215659 | tig0021300:+58220 | Msa1389780:CDS |
| GCAGAAAGGTTGAAACTTTA+GGG | 0.248099 | tig0021300:-57723 | None:intergenic |
| GTGATCAAGGAAGATGAAAT+TGG | 0.263380 | tig0021300:+58450 | Msa1389780:CDS |
| TGCAGAAAGGTTGAAACTTT+AGG | 0.282765 | tig0021300:-57724 | None:intergenic |
| CTCTCCTCCTCATGCCATCT+TGG | 0.286730 | tig0021300:+57788 | Msa1389780:CDS |
| GATTGTAGTGTTGGCGAATT+GGG | 0.290280 | tig0021300:-57750 | None:intergenic |
| TGGTCAAACCCTAGCTTCTA+TGG | 0.293021 | tig0021300:+57927 | Msa1389780:CDS |
| GTTGAAGGTTGGAGCTCATT+TGG | 0.304474 | tig0021300:+58296 | Msa1389780:CDS |
| AGTTGGGAGAAGCAGTTTAG+AGG | 0.305193 | tig0021300:+58506 | Msa1389780:CDS |
| GGTTGAAACTTTAGGGAGAT+TGG | 0.308036 | tig0021300:-57716 | None:intergenic |
| CTTATTAGAGGTGATAAAGT+TGG | 0.314713 | tig0021300:+58489 | Msa1389780:CDS |
| AACCTCTTGTGTTTCTGGTT+TGG | 0.324737 | tig0021300:+57975 | Msa1389780:CDS |
| GGATAGTGAGATTCTTGTTA+TGG | 0.338333 | tig0021300:+58020 | Msa1389780:CDS |
| ATTCTTGTTATGGTTGGTGC+TGG | 0.339331 | tig0021300:+58030 | Msa1389780:CDS |
| AAACACAAGAGGTTCTATAA+AGG | 0.342979 | tig0021300:-57966 | None:intergenic |
| TTCTTGTTATGGTTGGTGCT+GGG | 0.346295 | tig0021300:+58031 | Msa1389780:CDS |
| AGATTGTAGTGTTGGCGAAT+TGG | 0.347884 | tig0021300:-57751 | None:intergenic |
| GGATTGGATGTGATTGATTA+GGG | 0.349889 | tig0021300:-57695 | None:intergenic |
| TATGGTTGGTGCTGGGGCTC+TGG | 0.359468 | tig0021300:+58038 | Msa1389780:CDS |
| CAAGGTTATTTCATCTTTGT+TGG | 0.364089 | tig0021300:-57614 | None:intergenic |
| TGGATTGGATGTGATTGATT+AGG | 0.366687 | tig0021300:-57696 | None:intergenic |
| GGTTGGAGCTCATTTGGATT+TGG | 0.375125 | tig0021300:+58302 | Msa1389780:CDS |
| TTCTGCTGTTGTTGATATGC+TGG | 0.375347 | tig0021300:+58554 | Msa1389780:CDS |
| AACTTGTTGGAGCTTATTAG+AGG | 0.376708 | tig0021300:+58477 | Msa1389780:CDS |
| TGTGATTGATTAGGGTTTGA+TGG | 0.384399 | tig0021300:-57687 | None:intergenic |
| GGGAATTTGGATGAGGTTGT+TGG | 0.406725 | tig0021300:+58213 | Msa1389780:CDS |
| TGATCAAGGAAGATGAAATT+GGG | 0.408514 | tig0021300:+58451 | Msa1389780:CDS |
| AAAATGAGCTTTAATCAAAT+GGG | 0.414889 | tig0021300:-58064 | None:intergenic |
| TGTGAGCTGTGCTACTAATT+CGG | 0.423913 | tig0021300:+58248 | Msa1389780:CDS |
| GTTGAAGCAGGGGAGCTTGT+GGG | 0.429786 | tig0021300:+58411 | Msa1389780:CDS |
| TAGGGTTTGATGGGTGAGGA+TGG | 0.429813 | tig0021300:-57677 | None:intergenic |
| TTATTAGAGGTGATAAAGTT+GGG | 0.439432 | tig0021300:+58490 | Msa1389780:CDS |
| GGAGCTCATTTGGATTTGGT+TGG | 0.440193 | tig0021300:+58306 | Msa1389780:CDS |
| AACACAAGAGGTTCTATAAA+GGG | 0.442179 | tig0021300:-57965 | None:intergenic |
| AAACTTTAGGGAGATTGGAT+TGG | 0.446377 | tig0021300:-57711 | None:intergenic |
| AAGGAGAGAGATTGTAGTGT+TGG | 0.449638 | tig0021300:-57759 | None:intergenic |
| CAGAATTTACCAGGTGTTCA+AGG | 0.463641 | tig0021300:+57877 | Msa1389780:CDS |
| CGATGATGAGGCTTTGAAAA+GGG | 0.466108 | tig0021300:+58356 | Msa1389780:CDS |
| ACCCCTTCTTTCCCTTACAT+TGG | 0.466323 | tig0021300:+57817 | Msa1389780:CDS |
| GCGAATTGGGGTTTGCAGAA+AGG | 0.466530 | tig0021300:-57737 | None:intergenic |
| GGATGAGGTTGTTGGATTTG+GGG | 0.471029 | tig0021300:+58221 | Msa1389780:CDS |
| TGATTAGGGTTTGATGGGTG+AGG | 0.472118 | tig0021300:-57681 | None:intergenic |
| GGGTTGTGGGAATTTGGATG+AGG | 0.472644 | tig0021300:+58206 | Msa1389780:CDS |
| TGTTGACAATGAGGCTGCAT+TGG | 0.473667 | tig0021300:+58389 | Msa1389780:CDS |
| TTGGAATAGGACAGTTGAAA+AGG | 0.474625 | tig0021300:+58119 | Msa1389780:CDS |
| AGTTGAAAAGGCGAAAACTT+TGG | 0.477139 | tig0021300:+58131 | Msa1389780:CDS |
| GCGATGATGAGGCTTTGAAA+AGG | 0.487737 | tig0021300:+58355 | Msa1389780:CDS |
| GAGGCTGCATTGGTTGAAGC+AGG | 0.488309 | tig0021300:+58399 | Msa1389780:CDS |
| ACGCCAATGTAAGGGAAAGA+AGG | 0.489748 | tig0021300:-57820 | None:intergenic |
| AGTGAGATTCTTGTTATGGT+TGG | 0.493863 | tig0021300:+58024 | Msa1389780:CDS |
| CAGTGGAATCCATAGAAGCT+AGG | 0.498004 | tig0021300:-57936 | None:intergenic |
| CGCCAATGTAAGGGAAAGAA+GGG | 0.501170 | tig0021300:-57819 | None:intergenic |
| GGTTGAAGCAGGGGAGCTTG+TGG | 0.506759 | tig0021300:+58410 | Msa1389780:CDS |
| GTGATTGATTAGGGTTTGAT+GGG | 0.510607 | tig0021300:-57686 | None:intergenic |
| TCTTGTTATGGTTGGTGCTG+GGG | 0.518068 | tig0021300:+58032 | Msa1389780:CDS |
| ATGAGGAGGAGAGAAGAAGA+AGG | 0.525500 | tig0021300:-57778 | None:intergenic |
| GGTTATTTCATCTTTGTTGG+TGG | 0.525572 | tig0021300:-57611 | None:intergenic |
| TTCGGAGACAGCGCTTGTGA+AGG | 0.531883 | tig0021300:+58266 | Msa1389780:CDS |
| AACTCTTCACAGAATTTACC+AGG | 0.535091 | tig0021300:+57868 | Msa1389780:CDS |
| AAGGGTGAGAGGTTGAAGGT+TGG | 0.535869 | tig0021300:+58285 | Msa1389780:CDS |
| TCGGAGACAGCGCTTGTGAA+GGG | 0.542077 | tig0021300:+58267 | Msa1389780:CDS |
| ATTGTAGTGTTGGCGAATTG+GGG | 0.548453 | tig0021300:-57749 | None:intergenic |
| AGTGGAATCCATAGAAGCTA+GGG | 0.550169 | tig0021300:-57935 | None:intergenic |
| TGTGAAGGGTGAGAGGTTGA+AGG | 0.554444 | tig0021300:+58281 | Msa1389780:CDS |
| TTCTAAGTATTTATCTAGAG+AGG | 0.559027 | tig0021300:+57999 | Msa1389780:CDS |
| GGCTGCATTGGTTGAAGCAG+GGG | 0.573870 | tig0021300:+58401 | Msa1389780:CDS |
| CAGCGCTTGTGAAGGGTGAG+AGG | 0.592375 | tig0021300:+58274 | Msa1389780:CDS |
| TCTATAAAGGGTAAGTTCAG+TGG | 0.595025 | tig0021300:-57953 | None:intergenic |
| AGGCTGCATTGGTTGAAGCA+GGG | 0.600932 | tig0021300:+58400 | Msa1389780:CDS |
| GATGAAGGAATGCGATGATG+AGG | 0.601681 | tig0021300:+58344 | Msa1389780:CDS |
| ACATAGCTACCTTGAACACC+TGG | 0.601923 | tig0021300:-57886 | None:intergenic |
| TGAGACATACACAAGGACAT+AGG | 0.603141 | tig0021300:+58593 | Msa1389780:CDS |
| GATCAAGGAAGATGAAATTG+GGG | 0.606167 | tig0021300:+58452 | Msa1389780:CDS |
| GATGATGAGGCTTTGAAAAG+GGG | 0.611939 | tig0021300:+58357 | Msa1389780:CDS |
| TGGAAGACCAAGATGGCATG+AGG | 0.616337 | tig0021300:-57795 | None:intergenic |
| GAAGATTGGAGAAGAAGACA+AGG | 0.629073 | tig0021300:-57632 | None:intergenic |
| AAATGAGCTTTAATCAAATG+GGG | 0.636157 | tig0021300:-58063 | None:intergenic |
| GAAGGGGTGGAAGACCAAGA+TGG | 0.648922 | tig0021300:-57802 | None:intergenic |
| AAGACCAAGATGGCATGAGG+AGG | 0.652328 | tig0021300:-57792 | None:intergenic |
| ATGATGAGGCTTTGAAAAGG+GGG | 0.653133 | tig0021300:+58358 | Msa1389780:CDS |
| AGCCAAACCAGAAACACAAG+AGG | 0.653819 | tig0021300:-57977 | None:intergenic |
| AATGTAAGGGAAAGAAGGGG+TGG | 0.662449 | tig0021300:-57815 | None:intergenic |
| ATCAAGGAAGATGAAATTGG+GGG | 0.695243 | tig0021300:+58453 | Msa1389780:CDS |
| TCAAGGAAGATGAAATTGGG+GGG | 0.718689 | tig0021300:+58454 | Msa1389780:CDS |
| TTGTTTATGAGACATACACA+AGG | 0.727977 | tig0021300:+58586 | Msa1389780:CDS |
| GCCAATGTAAGGGAAAGAAG+GGG | 0.729180 | tig0021300:-57818 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATACTTTTTTCAAACT+GGG | - | tig0021300:58099-58118 | None:intergenic | 15.0% |
| !!! | AATTAATACTTTTTTCAAAC+TGG | - | tig0021300:58100-58119 | None:intergenic | 15.0% |
| !!! | GTTTGAAAAAAGTATTAATT+TGG | + | tig0021300:58100-58119 | Msa1389780:CDS | 15.0% |
| !!! | AAAAAGTATTAATTTGGAAT+AGG | + | tig0021300:58106-58125 | Msa1389780:CDS | 15.0% |
| !!! | ATTAATACTTTTTTCAAACT+GGG | - | tig0021300:58099-58118 | None:intergenic | 15.0% |
| !!! | AATTAATACTTTTTTCAAAC+TGG | - | tig0021300:58100-58119 | None:intergenic | 15.0% |
| !!! | GTTTGAAAAAAGTATTAATT+TGG | + | tig0021300:58100-58119 | Msa1389780:CDS | 15.0% |
| !!! | AAAAAGTATTAATTTGGAAT+AGG | + | tig0021300:58106-58125 | Msa1389780:CDS | 15.0% |
| !!! | AAAATGAGCTTTAATCAAAT+GGG | - | tig0021300:58067-58086 | None:intergenic | 20.0% |
| !!! | AAAAATGAGCTTTAATCAAA+TGG | - | tig0021300:58068-58087 | None:intergenic | 20.0% |
| !!! | AAAATGAGCTTTAATCAAAT+GGG | - | tig0021300:58067-58086 | None:intergenic | 20.0% |
| !!! | AAAAATGAGCTTTAATCAAA+TGG | - | tig0021300:58068-58087 | None:intergenic | 20.0% |
| ! | TTCTAAGTATTTATCTAGAG+AGG | + | tig0021300:57999-58018 | Msa1389780:CDS | 25.0% |
| !! | AAATGAGCTTTAATCAAATG+GGG | - | tig0021300:58066-58085 | None:intergenic | 25.0% |
| ! | TTATTAGAGGTGATAAAGTT+GGG | + | tig0021300:58490-58509 | Msa1389780:CDS | 25.0% |
| ! | TTCTAAGTATTTATCTAGAG+AGG | + | tig0021300:57999-58018 | Msa1389780:CDS | 25.0% |
| !! | AAATGAGCTTTAATCAAATG+GGG | - | tig0021300:58066-58085 | None:intergenic | 25.0% |
| ! | TTATTAGAGGTGATAAAGTT+GGG | + | tig0021300:58490-58509 | Msa1389780:CDS | 25.0% |
| ! | CAAGGTTATTTCATCTTTGT+TGG | - | tig0021300:57617-57636 | None:intergenic | 30.0% |
| ! | TTTTCAGTGGATATGAAGAT+TGG | - | tig0021300:57649-57668 | None:intergenic | 30.0% |
| ! | AATTCTGTGAAGAGTTTTCA+GGG | - | tig0021300:57864-57883 | None:intergenic | 30.0% |
| ! | AAATTCTGTGAAGAGTTTTC+AGG | - | tig0021300:57865-57884 | None:intergenic | 30.0% |
| ! | GTTCTTTTCAATTCAACAAC+TGG | + | tig0021300:57907-57926 | Msa1389780:CDS | 30.0% |
| AACACAAGAGGTTCTATAAA+GGG | - | tig0021300:57968-57987 | None:intergenic | 30.0% | |
| AAACACAAGAGGTTCTATAA+AGG | - | tig0021300:57969-57988 | None:intergenic | 30.0% | |
| !! | TTAAAGCTCATTTTTCAGCT+AGG | + | tig0021300:58073-58092 | Msa1389780:CDS | 30.0% |
| ! | TTCTTTTAAGCATTCGATGA+AGG | + | tig0021300:58329-58348 | Msa1389780:CDS | 30.0% |
| ! | GAAAGTTTTTGTTGACAATG+AGG | + | tig0021300:58380-58399 | Msa1389780:CDS | 30.0% |
| TGATCAAGGAAGATGAAATT+GGG | + | tig0021300:58451-58470 | Msa1389780:CDS | 30.0% | |
| CTTATTAGAGGTGATAAAGT+TGG | + | tig0021300:58489-58508 | Msa1389780:CDS | 30.0% | |
| !!! | ATTACTGTTTTCAAGTCTGT+TGG | + | tig0021300:58531-58550 | Msa1389780:CDS | 30.0% |
| TTGTTTATGAGACATACACA+AGG | + | tig0021300:58586-58605 | Msa1389780:CDS | 30.0% | |
| ! | CAAGGTTATTTCATCTTTGT+TGG | - | tig0021300:57617-57636 | None:intergenic | 30.0% |
| ! | TTTTCAGTGGATATGAAGAT+TGG | - | tig0021300:57649-57668 | None:intergenic | 30.0% |
| ! | AATTCTGTGAAGAGTTTTCA+GGG | - | tig0021300:57864-57883 | None:intergenic | 30.0% |
| ! | AAATTCTGTGAAGAGTTTTC+AGG | - | tig0021300:57865-57884 | None:intergenic | 30.0% |
| ! | GTTCTTTTCAATTCAACAAC+TGG | + | tig0021300:57907-57926 | Msa1389780:CDS | 30.0% |
| AACACAAGAGGTTCTATAAA+GGG | - | tig0021300:57968-57987 | None:intergenic | 30.0% | |
| AAACACAAGAGGTTCTATAA+AGG | - | tig0021300:57969-57988 | None:intergenic | 30.0% | |
| !! | TTAAAGCTCATTTTTCAGCT+AGG | + | tig0021300:58073-58092 | Msa1389780:CDS | 30.0% |
| ! | TTCTTTTAAGCATTCGATGA+AGG | + | tig0021300:58329-58348 | Msa1389780:CDS | 30.0% |
| ! | GAAAGTTTTTGTTGACAATG+AGG | + | tig0021300:58380-58399 | Msa1389780:CDS | 30.0% |
| TGATCAAGGAAGATGAAATT+GGG | + | tig0021300:58451-58470 | Msa1389780:CDS | 30.0% | |
| CTTATTAGAGGTGATAAAGT+TGG | + | tig0021300:58489-58508 | Msa1389780:CDS | 30.0% | |
| !!! | ATTACTGTTTTCAAGTCTGT+TGG | + | tig0021300:58531-58550 | Msa1389780:CDS | 30.0% |
| TTGTTTATGAGACATACACA+AGG | + | tig0021300:58586-58605 | Msa1389780:CDS | 30.0% | |
| ! | GGTTATTTCATCTTTGTTGG+TGG | - | tig0021300:57614-57633 | None:intergenic | 35.0% |
| GTGATTGATTAGGGTTTGAT+GGG | - | tig0021300:57689-57708 | None:intergenic | 35.0% | |
| TGTGATTGATTAGGGTTTGA+TGG | - | tig0021300:57690-57709 | None:intergenic | 35.0% | |
| GGATTGGATGTGATTGATTA+GGG | - | tig0021300:57698-57717 | None:intergenic | 35.0% | |
| ! | TGGATTGGATGTGATTGATT+AGG | - | tig0021300:57699-57718 | None:intergenic | 35.0% |
| ! | AAACTTTAGGGAGATTGGAT+TGG | - | tig0021300:57714-57733 | None:intergenic | 35.0% |
| GCAGAAAGGTTGAAACTTTA+GGG | - | tig0021300:57726-57745 | None:intergenic | 35.0% | |
| TGCAGAAAGGTTGAAACTTT+AGG | - | tig0021300:57727-57746 | None:intergenic | 35.0% | |
| !! | TGAAGAGTTTTCAGGGAAAT+GGG | - | tig0021300:57857-57876 | None:intergenic | 35.0% |
| AACTCTTCACAGAATTTACC+AGG | + | tig0021300:57868-57887 | Msa1389780:CDS | 35.0% | |
| TCTATAAAGGGTAAGTTCAG+TGG | - | tig0021300:57956-57975 | None:intergenic | 35.0% | |
| TATAGAACCTCTTGTGTTTC+TGG | + | tig0021300:57970-57989 | Msa1389780:CDS | 35.0% | |
| GGATAGTGAGATTCTTGTTA+TGG | + | tig0021300:58020-58039 | Msa1389780:CDS | 35.0% | |
| ! | AGTGAGATTCTTGTTATGGT+TGG | + | tig0021300:58024-58043 | Msa1389780:CDS | 35.0% |
| TTGGAATAGGACAGTTGAAA+AGG | + | tig0021300:58119-58138 | Msa1389780:CDS | 35.0% | |
| AGTTGAAAAGGCGAAAACTT+TGG | + | tig0021300:58131-58150 | Msa1389780:CDS | 35.0% | |
| GTGATCAAGGAAGATGAAAT+TGG | + | tig0021300:58450-58469 | Msa1389780:CDS | 35.0% | |
| GATCAAGGAAGATGAAATTG+GGG | + | tig0021300:58452-58471 | Msa1389780:CDS | 35.0% | |
| ATCAAGGAAGATGAAATTGG+GGG | + | tig0021300:58453-58472 | Msa1389780:CDS | 35.0% | |
| !! | AACTTGTTGGAGCTTATTAG+AGG | + | tig0021300:58477-58496 | Msa1389780:CDS | 35.0% |
| ! | GGTTATTTCATCTTTGTTGG+TGG | - | tig0021300:57614-57633 | None:intergenic | 35.0% |
| GTGATTGATTAGGGTTTGAT+GGG | - | tig0021300:57689-57708 | None:intergenic | 35.0% | |
| TGTGATTGATTAGGGTTTGA+TGG | - | tig0021300:57690-57709 | None:intergenic | 35.0% | |
| GGATTGGATGTGATTGATTA+GGG | - | tig0021300:57698-57717 | None:intergenic | 35.0% | |
| ! | TGGATTGGATGTGATTGATT+AGG | - | tig0021300:57699-57718 | None:intergenic | 35.0% |
| ! | AAACTTTAGGGAGATTGGAT+TGG | - | tig0021300:57714-57733 | None:intergenic | 35.0% |
| GCAGAAAGGTTGAAACTTTA+GGG | - | tig0021300:57726-57745 | None:intergenic | 35.0% | |
| TGCAGAAAGGTTGAAACTTT+AGG | - | tig0021300:57727-57746 | None:intergenic | 35.0% | |
| !! | TGAAGAGTTTTCAGGGAAAT+GGG | - | tig0021300:57857-57876 | None:intergenic | 35.0% |
| AACTCTTCACAGAATTTACC+AGG | + | tig0021300:57868-57887 | Msa1389780:CDS | 35.0% | |
| TCTATAAAGGGTAAGTTCAG+TGG | - | tig0021300:57956-57975 | None:intergenic | 35.0% | |
| TATAGAACCTCTTGTGTTTC+TGG | + | tig0021300:57970-57989 | Msa1389780:CDS | 35.0% | |
| GGATAGTGAGATTCTTGTTA+TGG | + | tig0021300:58020-58039 | Msa1389780:CDS | 35.0% | |
| ! | AGTGAGATTCTTGTTATGGT+TGG | + | tig0021300:58024-58043 | Msa1389780:CDS | 35.0% |
| TTGGAATAGGACAGTTGAAA+AGG | + | tig0021300:58119-58138 | Msa1389780:CDS | 35.0% | |
| AGTTGAAAAGGCGAAAACTT+TGG | + | tig0021300:58131-58150 | Msa1389780:CDS | 35.0% | |
| GTGATCAAGGAAGATGAAAT+TGG | + | tig0021300:58450-58469 | Msa1389780:CDS | 35.0% | |
| GATCAAGGAAGATGAAATTG+GGG | + | tig0021300:58452-58471 | Msa1389780:CDS | 35.0% | |
| ATCAAGGAAGATGAAATTGG+GGG | + | tig0021300:58453-58472 | Msa1389780:CDS | 35.0% | |
| !! | AACTTGTTGGAGCTTATTAG+AGG | + | tig0021300:58477-58496 | Msa1389780:CDS | 35.0% |
| GAAGATTGGAGAAGAAGACA+AGG | - | tig0021300:57635-57654 | None:intergenic | 40.0% | |
| ! | GATGGTTCGTAGATTTTCAG+TGG | - | tig0021300:57662-57681 | None:intergenic | 40.0% |
| ! | GGTTGAAACTTTAGGGAGAT+TGG | - | tig0021300:57719-57738 | None:intergenic | 40.0% |
| !! | ATTGTAGTGTTGGCGAATTG+GGG | - | tig0021300:57752-57771 | None:intergenic | 40.0% |
| !! | GATTGTAGTGTTGGCGAATT+GGG | - | tig0021300:57753-57772 | None:intergenic | 40.0% |
| !! | AGATTGTAGTGTTGGCGAAT+TGG | - | tig0021300:57754-57773 | None:intergenic | 40.0% |
| AAGGAGAGAGATTGTAGTGT+TGG | - | tig0021300:57762-57781 | None:intergenic | 40.0% | |
| ! | CGAGTTTTACGCCAATGTAA+GGG | - | tig0021300:57831-57850 | None:intergenic | 40.0% |
| ! | ACGAGTTTTACGCCAATGTA+AGG | - | tig0021300:57832-57851 | None:intergenic | 40.0% |
| !! | GTGAAGAGTTTTCAGGGAAA+TGG | - | tig0021300:57858-57877 | None:intergenic | 40.0% |
| CAGAATTTACCAGGTGTTCA+AGG | + | tig0021300:57877-57896 | Msa1389780:CDS | 40.0% | |
| AGTGGAATCCATAGAAGCTA+GGG | - | tig0021300:57938-57957 | None:intergenic | 40.0% | |
| !! | AACCTCTTGTGTTTCTGGTT+TGG | + | tig0021300:57975-57994 | Msa1389780:CDS | 40.0% |
| ! | ATTCTTGTTATGGTTGGTGC+TGG | + | tig0021300:58030-58049 | Msa1389780:CDS | 40.0% |
| ! | TTCTTGTTATGGTTGGTGCT+GGG | + | tig0021300:58031-58050 | Msa1389780:CDS | 40.0% |
| ! | AGCGATGAATTTTCGCTTTC+AGG | + | tig0021300:58171-58190 | Msa1389780:CDS | 40.0% |
| ! | GCGATGAATTTTCGCTTTCA+GGG | + | tig0021300:58172-58191 | Msa1389780:CDS | 40.0% |
| !! | CTTTCAGGGTTGAGTTTTGA+GGG | + | tig0021300:58186-58205 | Msa1389780:CDS | 40.0% |
| !! | TTTTGAGGGTTGTGGGAATT+TGG | + | tig0021300:58200-58219 | Msa1389780:CDS | 40.0% |
| TTGGATGAGGTTGTTGGATT+TGG | + | tig0021300:58219-58238 | Msa1389780:CDS | 40.0% | |
| TGGATGAGGTTGTTGGATTT+GGG | + | tig0021300:58220-58239 | Msa1389780:CDS | 40.0% | |
| ! | TGTGAGCTGTGCTACTAATT+CGG | + | tig0021300:58248-58267 | Msa1389780:CDS | 40.0% |
| !! | CGATGATGAGGCTTTGAAAA+GGG | + | tig0021300:58356-58375 | Msa1389780:CDS | 40.0% |
| !! | GATGATGAGGCTTTGAAAAG+GGG | + | tig0021300:58357-58376 | Msa1389780:CDS | 40.0% |
| !! | ATGATGAGGCTTTGAAAAGG+GGG | + | tig0021300:58358-58377 | Msa1389780:CDS | 40.0% |
| !! | TTTTGAAAGGGGTGTGATCA+AGG | + | tig0021300:58437-58456 | Msa1389780:CDS | 40.0% |
| TCAAGGAAGATGAAATTGGG+GGG | + | tig0021300:58454-58473 | Msa1389780:CDS | 40.0% | |
| TTCTGCTGTTGTTGATATGC+TGG | + | tig0021300:58554-58573 | Msa1389780:CDS | 40.0% | |
| GAAGATTGGAGAAGAAGACA+AGG | - | tig0021300:57635-57654 | None:intergenic | 40.0% | |
| ! | GATGGTTCGTAGATTTTCAG+TGG | - | tig0021300:57662-57681 | None:intergenic | 40.0% |
| ! | GGTTGAAACTTTAGGGAGAT+TGG | - | tig0021300:57719-57738 | None:intergenic | 40.0% |
| !! | ATTGTAGTGTTGGCGAATTG+GGG | - | tig0021300:57752-57771 | None:intergenic | 40.0% |
| !! | GATTGTAGTGTTGGCGAATT+GGG | - | tig0021300:57753-57772 | None:intergenic | 40.0% |
| !! | AGATTGTAGTGTTGGCGAAT+TGG | - | tig0021300:57754-57773 | None:intergenic | 40.0% |
| AAGGAGAGAGATTGTAGTGT+TGG | - | tig0021300:57762-57781 | None:intergenic | 40.0% | |
| ! | CGAGTTTTACGCCAATGTAA+GGG | - | tig0021300:57831-57850 | None:intergenic | 40.0% |
| ! | ACGAGTTTTACGCCAATGTA+AGG | - | tig0021300:57832-57851 | None:intergenic | 40.0% |
| !! | GTGAAGAGTTTTCAGGGAAA+TGG | - | tig0021300:57858-57877 | None:intergenic | 40.0% |
| CAGAATTTACCAGGTGTTCA+AGG | + | tig0021300:57877-57896 | Msa1389780:CDS | 40.0% | |
| AGTGGAATCCATAGAAGCTA+GGG | - | tig0021300:57938-57957 | None:intergenic | 40.0% | |
| !! | AACCTCTTGTGTTTCTGGTT+TGG | + | tig0021300:57975-57994 | Msa1389780:CDS | 40.0% |
| ! | ATTCTTGTTATGGTTGGTGC+TGG | + | tig0021300:58030-58049 | Msa1389780:CDS | 40.0% |
| ! | TTCTTGTTATGGTTGGTGCT+GGG | + | tig0021300:58031-58050 | Msa1389780:CDS | 40.0% |
| ! | AGCGATGAATTTTCGCTTTC+AGG | + | tig0021300:58171-58190 | Msa1389780:CDS | 40.0% |
| ! | GCGATGAATTTTCGCTTTCA+GGG | + | tig0021300:58172-58191 | Msa1389780:CDS | 40.0% |
| !! | CTTTCAGGGTTGAGTTTTGA+GGG | + | tig0021300:58186-58205 | Msa1389780:CDS | 40.0% |
| !! | TTTTGAGGGTTGTGGGAATT+TGG | + | tig0021300:58200-58219 | Msa1389780:CDS | 40.0% |
| TTGGATGAGGTTGTTGGATT+TGG | + | tig0021300:58219-58238 | Msa1389780:CDS | 40.0% | |
| TGGATGAGGTTGTTGGATTT+GGG | + | tig0021300:58220-58239 | Msa1389780:CDS | 40.0% | |
| ! | TGTGAGCTGTGCTACTAATT+CGG | + | tig0021300:58248-58267 | Msa1389780:CDS | 40.0% |
| !! | CGATGATGAGGCTTTGAAAA+GGG | + | tig0021300:58356-58375 | Msa1389780:CDS | 40.0% |
| !! | GATGATGAGGCTTTGAAAAG+GGG | + | tig0021300:58357-58376 | Msa1389780:CDS | 40.0% |
| !! | ATGATGAGGCTTTGAAAAGG+GGG | + | tig0021300:58358-58377 | Msa1389780:CDS | 40.0% |
| !! | TTTTGAAAGGGGTGTGATCA+AGG | + | tig0021300:58437-58456 | Msa1389780:CDS | 40.0% |
| TCAAGGAAGATGAAATTGGG+GGG | + | tig0021300:58454-58473 | Msa1389780:CDS | 40.0% | |
| TTCTGCTGTTGTTGATATGC+TGG | + | tig0021300:58554-58573 | Msa1389780:CDS | 40.0% | |
| ! | TGATTAGGGTTTGATGGGTG+AGG | - | tig0021300:57684-57703 | None:intergenic | 45.0% |
| ATGAGGAGGAGAGAAGAAGA+AGG | - | tig0021300:57781-57800 | None:intergenic | 45.0% | |
| AATGTAAGGGAAAGAAGGGG+TGG | - | tig0021300:57818-57837 | None:intergenic | 45.0% | |
| ACCCCTTCTTTCCCTTACAT+TGG | + | tig0021300:57817-57836 | Msa1389780:CDS | 45.0% | |
| GCCAATGTAAGGGAAAGAAG+GGG | - | tig0021300:57821-57840 | None:intergenic | 45.0% | |
| CGCCAATGTAAGGGAAAGAA+GGG | - | tig0021300:57822-57841 | None:intergenic | 45.0% | |
| ACGCCAATGTAAGGGAAAGA+AGG | - | tig0021300:57823-57842 | None:intergenic | 45.0% | |
| ACATAGCTACCTTGAACACC+TGG | - | tig0021300:57889-57908 | None:intergenic | 45.0% | |
| TGGTCAAACCCTAGCTTCTA+TGG | + | tig0021300:57927-57946 | Msa1389780:CDS | 45.0% | |
| CAGTGGAATCCATAGAAGCT+AGG | - | tig0021300:57939-57958 | None:intergenic | 45.0% | |
| AGCCAAACCAGAAACACAAG+AGG | - | tig0021300:57980-57999 | None:intergenic | 45.0% | |
| !! | TCTTGTTATGGTTGGTGCTG+GGG | + | tig0021300:58032-58051 | Msa1389780:CDS | 45.0% |
| ! | GCTTTCAGGGTTGAGTTTTG+AGG | + | tig0021300:58185-58204 | Msa1389780:CDS | 45.0% |
| !!! | GGTTGAGTTTTGAGGGTTGT+GGG | + | tig0021300:58193-58212 | Msa1389780:CDS | 45.0% |
| GGGAATTTGGATGAGGTTGT+TGG | + | tig0021300:58213-58232 | Msa1389780:CDS | 45.0% | |
| GGATGAGGTTGTTGGATTTG+GGG | + | tig0021300:58221-58240 | Msa1389780:CDS | 45.0% | |
| GTTGAAGGTTGGAGCTCATT+TGG | + | tig0021300:58296-58315 | Msa1389780:CDS | 45.0% | |
| GGTTGGAGCTCATTTGGATT+TGG | + | tig0021300:58302-58321 | Msa1389780:CDS | 45.0% | |
| ! | GGAGCTCATTTGGATTTGGT+TGG | + | tig0021300:58306-58325 | Msa1389780:CDS | 45.0% |
| GATGAAGGAATGCGATGATG+AGG | + | tig0021300:58344-58363 | Msa1389780:CDS | 45.0% | |
| !! | GCGATGATGAGGCTTTGAAA+AGG | + | tig0021300:58355-58374 | Msa1389780:CDS | 45.0% |
| TGTTGACAATGAGGCTGCAT+TGG | + | tig0021300:58389-58408 | Msa1389780:CDS | 45.0% | |
| ! | AGCTTGTGGGTGCTTTTGAA+AGG | + | tig0021300:58424-58443 | Msa1389780:CDS | 45.0% |
| !! | GCTTGTGGGTGCTTTTGAAA+GGG | + | tig0021300:58425-58444 | Msa1389780:CDS | 45.0% |
| !! | CTTGTGGGTGCTTTTGAAAG+GGG | + | tig0021300:58426-58445 | Msa1389780:CDS | 45.0% |
| TGAAATTGGGGGGAACTTGT+TGG | + | tig0021300:58464-58483 | Msa1389780:CDS | 45.0% | |
| AGTTGGGAGAAGCAGTTTAG+AGG | + | tig0021300:58506-58525 | Msa1389780:CDS | 45.0% | |
| ! | TGATTAGGGTTTGATGGGTG+AGG | - | tig0021300:57684-57703 | None:intergenic | 45.0% |
| ATGAGGAGGAGAGAAGAAGA+AGG | - | tig0021300:57781-57800 | None:intergenic | 45.0% | |
| AATGTAAGGGAAAGAAGGGG+TGG | - | tig0021300:57818-57837 | None:intergenic | 45.0% | |
| ACCCCTTCTTTCCCTTACAT+TGG | + | tig0021300:57817-57836 | Msa1389780:CDS | 45.0% | |
| GCCAATGTAAGGGAAAGAAG+GGG | - | tig0021300:57821-57840 | None:intergenic | 45.0% | |
| CGCCAATGTAAGGGAAAGAA+GGG | - | tig0021300:57822-57841 | None:intergenic | 45.0% | |
| ACGCCAATGTAAGGGAAAGA+AGG | - | tig0021300:57823-57842 | None:intergenic | 45.0% | |
| ACATAGCTACCTTGAACACC+TGG | - | tig0021300:57889-57908 | None:intergenic | 45.0% | |
| TGGTCAAACCCTAGCTTCTA+TGG | + | tig0021300:57927-57946 | Msa1389780:CDS | 45.0% | |
| CAGTGGAATCCATAGAAGCT+AGG | - | tig0021300:57939-57958 | None:intergenic | 45.0% | |
| AGCCAAACCAGAAACACAAG+AGG | - | tig0021300:57980-57999 | None:intergenic | 45.0% | |
| !! | TCTTGTTATGGTTGGTGCTG+GGG | + | tig0021300:58032-58051 | Msa1389780:CDS | 45.0% |
| ! | GCTTTCAGGGTTGAGTTTTG+AGG | + | tig0021300:58185-58204 | Msa1389780:CDS | 45.0% |
| !!! | GGTTGAGTTTTGAGGGTTGT+GGG | + | tig0021300:58193-58212 | Msa1389780:CDS | 45.0% |
| GGGAATTTGGATGAGGTTGT+TGG | + | tig0021300:58213-58232 | Msa1389780:CDS | 45.0% | |
| GGATGAGGTTGTTGGATTTG+GGG | + | tig0021300:58221-58240 | Msa1389780:CDS | 45.0% | |
| GTTGAAGGTTGGAGCTCATT+TGG | + | tig0021300:58296-58315 | Msa1389780:CDS | 45.0% | |
| GGTTGGAGCTCATTTGGATT+TGG | + | tig0021300:58302-58321 | Msa1389780:CDS | 45.0% | |
| ! | GGAGCTCATTTGGATTTGGT+TGG | + | tig0021300:58306-58325 | Msa1389780:CDS | 45.0% |
| GATGAAGGAATGCGATGATG+AGG | + | tig0021300:58344-58363 | Msa1389780:CDS | 45.0% | |
| !! | GCGATGATGAGGCTTTGAAA+AGG | + | tig0021300:58355-58374 | Msa1389780:CDS | 45.0% |
| TGTTGACAATGAGGCTGCAT+TGG | + | tig0021300:58389-58408 | Msa1389780:CDS | 45.0% | |
| ! | AGCTTGTGGGTGCTTTTGAA+AGG | + | tig0021300:58424-58443 | Msa1389780:CDS | 45.0% |
| !! | GCTTGTGGGTGCTTTTGAAA+GGG | + | tig0021300:58425-58444 | Msa1389780:CDS | 45.0% |
| !! | CTTGTGGGTGCTTTTGAAAG+GGG | + | tig0021300:58426-58445 | Msa1389780:CDS | 45.0% |
| TGAAATTGGGGGGAACTTGT+TGG | + | tig0021300:58464-58483 | Msa1389780:CDS | 45.0% | |
| AGTTGGGAGAAGCAGTTTAG+AGG | + | tig0021300:58506-58525 | Msa1389780:CDS | 45.0% | |
| ! | TAGGGTTTGATGGGTGAGGA+TGG | - | tig0021300:57680-57699 | None:intergenic | 50.0% |
| GCGAATTGGGGTTTGCAGAA+AGG | - | tig0021300:57740-57759 | None:intergenic | 50.0% | |
| AAGACCAAGATGGCATGAGG+AGG | - | tig0021300:57795-57814 | None:intergenic | 50.0% | |
| TGGAAGACCAAGATGGCATG+AGG | - | tig0021300:57798-57817 | None:intergenic | 50.0% | |
| !!! | GGGTTGAGTTTTGAGGGTTG+TGG | + | tig0021300:58192-58211 | Msa1389780:CDS | 50.0% |
| GGGTTGTGGGAATTTGGATG+AGG | + | tig0021300:58206-58225 | Msa1389780:CDS | 50.0% | |
| TGTGAAGGGTGAGAGGTTGA+AGG | + | tig0021300:58281-58300 | Msa1389780:CDS | 50.0% | |
| AAGGGTGAGAGGTTGAAGGT+TGG | + | tig0021300:58285-58304 | Msa1389780:CDS | 50.0% | |
| !! | AGGCTGCATTGGTTGAAGCA+GGG | + | tig0021300:58400-58419 | Msa1389780:CDS | 50.0% |
| ! | TAGGGTTTGATGGGTGAGGA+TGG | - | tig0021300:57680-57699 | None:intergenic | 50.0% |
| GCGAATTGGGGTTTGCAGAA+AGG | - | tig0021300:57740-57759 | None:intergenic | 50.0% | |
| AAGACCAAGATGGCATGAGG+AGG | - | tig0021300:57795-57814 | None:intergenic | 50.0% | |
| TGGAAGACCAAGATGGCATG+AGG | - | tig0021300:57798-57817 | None:intergenic | 50.0% | |
| !!! | GGGTTGAGTTTTGAGGGTTG+TGG | + | tig0021300:58192-58211 | Msa1389780:CDS | 50.0% |
| GGGTTGTGGGAATTTGGATG+AGG | + | tig0021300:58206-58225 | Msa1389780:CDS | 50.0% | |
| TGTGAAGGGTGAGAGGTTGA+AGG | + | tig0021300:58281-58300 | Msa1389780:CDS | 50.0% | |
| AAGGGTGAGAGGTTGAAGGT+TGG | + | tig0021300:58285-58304 | Msa1389780:CDS | 50.0% | |
| !! | AGGCTGCATTGGTTGAAGCA+GGG | + | tig0021300:58400-58419 | Msa1389780:CDS | 50.0% |
| CTCTCCTCCTCATGCCATCT+TGG | + | tig0021300:57788-57807 | Msa1389780:CDS | 55.0% | |
| GAAGGGGTGGAAGACCAAGA+TGG | - | tig0021300:57805-57824 | None:intergenic | 55.0% | |
| TTCGGAGACAGCGCTTGTGA+AGG | + | tig0021300:58266-58285 | Msa1389780:CDS | 55.0% | |
| TCGGAGACAGCGCTTGTGAA+GGG | + | tig0021300:58267-58286 | Msa1389780:CDS | 55.0% | |
| !! | GAGGCTGCATTGGTTGAAGC+AGG | + | tig0021300:58399-58418 | Msa1389780:CDS | 55.0% |
| !! | GGCTGCATTGGTTGAAGCAG+GGG | + | tig0021300:58401-58420 | Msa1389780:CDS | 55.0% |
| GTTGAAGCAGGGGAGCTTGT+GGG | + | tig0021300:58411-58430 | Msa1389780:CDS | 55.0% | |
| CTCTCCTCCTCATGCCATCT+TGG | + | tig0021300:57788-57807 | Msa1389780:CDS | 55.0% | |
| GAAGGGGTGGAAGACCAAGA+TGG | - | tig0021300:57805-57824 | None:intergenic | 55.0% | |
| TTCGGAGACAGCGCTTGTGA+AGG | + | tig0021300:58266-58285 | Msa1389780:CDS | 55.0% | |
| TCGGAGACAGCGCTTGTGAA+GGG | + | tig0021300:58267-58286 | Msa1389780:CDS | 55.0% | |
| !! | GAGGCTGCATTGGTTGAAGC+AGG | + | tig0021300:58399-58418 | Msa1389780:CDS | 55.0% |
| !! | GGCTGCATTGGTTGAAGCAG+GGG | + | tig0021300:58401-58420 | Msa1389780:CDS | 55.0% |
| GTTGAAGCAGGGGAGCTTGT+GGG | + | tig0021300:58411-58430 | Msa1389780:CDS | 55.0% | |
| !! | TATGGTTGGTGCTGGGGCTC+TGG | + | tig0021300:58038-58057 | Msa1389780:CDS | 60.0% |
| CAGCGCTTGTGAAGGGTGAG+AGG | + | tig0021300:58274-58293 | Msa1389780:CDS | 60.0% | |
| GGTTGAAGCAGGGGAGCTTG+TGG | + | tig0021300:58410-58429 | Msa1389780:CDS | 60.0% | |
| !! | TATGGTTGGTGCTGGGGCTC+TGG | + | tig0021300:58038-58057 | Msa1389780:CDS | 60.0% |
| CAGCGCTTGTGAAGGGTGAG+AGG | + | tig0021300:58274-58293 | Msa1389780:CDS | 60.0% | |
| GGTTGAAGCAGGGGAGCTTG+TGG | + | tig0021300:58410-58429 | Msa1389780:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021300 | gene | 57604 | 58614 | 57604 | ID=Msa1389780;Name=Msa1389780 |
| tig0021300 | mRNA | 57604 | 58614 | 57604 | ID=Msa1389780-mRNA-1;Parent=Msa1389780;Name=Msa1389780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|336 |
| tig0021300 | exon | 57604 | 58614 | 57604 | ID=Msa1389780-mRNA-1:exon:11769;Parent=Msa1389780-mRNA-1 |
| tig0021300 | CDS | 57604 | 58614 | 57604 | ID=Msa1389780-mRNA-1:cds;Parent=Msa1389780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
