Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0976250 | KEH25123.1 | 97.143 | 105 | 3 | 0 | 1 | 105 | 2 | 106 | 3.46e-68 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0976250 | A0A072U7M0 | 97.143 | 105 | 3 | 0 | 1 | 105 | 2 | 106 | 1.65e-68 | 209 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011720 | Msa0976250 | 0.818599 | 1.802507e-52 | -8.615850e-47 |
| Msa0032610 | Msa0976250 | 0.804342 | 2.261905e-49 | -8.615850e-47 |
| Msa0039330 | Msa0976250 | 0.820812 | 5.629494e-53 | -8.615850e-47 |
| Msa0044710 | Msa0976250 | 0.804433 | 2.165157e-49 | -8.615850e-47 |
| Msa0050730 | Msa0976250 | 0.831093 | 2.029558e-55 | -8.615850e-47 |
| Msa0050760 | Msa0976250 | 0.836016 | 1.197524e-56 | -8.615850e-47 |
| Msa0061150 | Msa0976250 | 0.805018 | 1.634320e-49 | -8.615850e-47 |
| Msa0069260 | Msa0976250 | 0.821074 | 4.899085e-53 | -8.615850e-47 |
| Msa0069280 | Msa0976250 | 0.802340 | 5.876628e-49 | -8.615850e-47 |
| Msa0069310 | Msa0976250 | 0.831756 | 1.393742e-55 | -8.615850e-47 |
| Msa0092990 | Msa0976250 | 0.826806 | 2.215755e-54 | -8.615850e-47 |
| Msa0094100 | Msa0976250 | 0.808828 | 2.556284e-50 | -8.615850e-47 |
| Msa0094920 | Msa0976250 | 0.823334 | 1.464601e-53 | -8.615850e-47 |
| Msa0095380 | Msa0976250 | 0.814797 | 1.282997e-51 | -8.615850e-47 |
| Msa0096940 | Msa0976250 | -0.800175 | 1.629961e-48 | -8.615850e-47 |
| Msa0105700 | Msa0976250 | 0.832517 | 9.038015e-56 | -8.615850e-47 |
| Msa0114540 | Msa0976250 | -0.804557 | 2.040641e-49 | -8.615850e-47 |
| Msa0607200 | Msa0976250 | 0.805160 | 1.526078e-49 | -8.615850e-47 |
| Msa0621590 | Msa0976250 | 0.813287 | 2.762336e-51 | -8.615850e-47 |
| Msa0623080 | Msa0976250 | 0.801584 | 8.405682e-49 | -8.615850e-47 |
| Msa0624730 | Msa0976250 | 0.810268 | 1.254378e-50 | -8.615850e-47 |
| Msa0638280 | Msa0976250 | 0.829985 | 3.788624e-55 | -8.615850e-47 |
| Msa0638320 | Msa0976250 | 0.821876 | 3.197097e-53 | -8.615850e-47 |
| Msa0647450 | Msa0976250 | -0.817739 | 2.820552e-52 | -8.615850e-47 |
| Msa0654010 | Msa0976250 | 0.804730 | 1.877513e-49 | -8.615850e-47 |
| Msa0660300 | Msa0976250 | 0.806602 | 7.597739e-50 | -8.615850e-47 |
| Msa0662650 | Msa0976250 | 0.829178 | 5.953058e-55 | -8.615850e-47 |
| Msa0663710 | Msa0976250 | 0.800995 | 1.109206e-48 | -8.615850e-47 |
| Msa0669850 | Msa0976250 | 0.819753 | 9.844560e-53 | -8.615850e-47 |
| Msa0677270 | Msa0976250 | 0.821529 | 3.846807e-53 | -8.615850e-47 |
| Msa0689010 | Msa0976250 | 0.800254 | 1.571353e-48 | -8.615850e-47 |
| Msa0692110 | Msa0976250 | 0.807671 | 4.511390e-50 | -8.615850e-47 |
| Msa0693380 | Msa0976250 | 0.820698 | 5.977404e-53 | -8.615850e-47 |
| Msa0708860 | Msa0976250 | 0.821328 | 4.279638e-53 | -8.615850e-47 |
| Msa0711490 | Msa0976250 | 0.831152 | 1.962428e-55 | -8.615850e-47 |
| Msa0715110 | Msa0976250 | 0.817820 | 2.704156e-52 | -8.615850e-47 |
| Msa0743260 | Msa0976250 | 0.843681 | 1.206818e-58 | -8.615850e-47 |
| Msa0790390 | Msa0976250 | -0.800260 | 1.566718e-48 | -8.615850e-47 |
| Msa0791820 | Msa0976250 | 0.806987 | 6.299268e-50 | -8.615850e-47 |
| Msa0791910 | Msa0976250 | 0.816889 | 4.380937e-52 | -8.615850e-47 |
| Msa0798070 | Msa0976250 | 0.800528 | 1.381329e-48 | -8.615850e-47 |
| Msa0813720 | Msa0976250 | 0.810579 | 1.074786e-50 | -8.615850e-47 |
| Msa0831870 | Msa0976250 | 0.800318 | 1.524708e-48 | -8.615850e-47 |
| Msa0126380 | Msa0976250 | 0.813900 | 2.025198e-51 | -8.615850e-47 |
| Msa0148120 | Msa0976250 | 0.807975 | 3.887424e-50 | -8.615850e-47 |
| Msa0152170 | Msa0976250 | 0.830029 | 3.696290e-55 | -8.615850e-47 |
| Msa0172350 | Msa0976250 | 0.805787 | 1.127686e-49 | -8.615850e-47 |
| Msa0172780 | Msa0976250 | 0.825288 | 5.086776e-54 | -8.615850e-47 |
| Msa0188630 | Msa0976250 | 0.804797 | 1.817623e-49 | -8.615850e-47 |
| Msa0188680 | Msa0976250 | -0.801125 | 1.043636e-48 | -8.615850e-47 |
| Msa0217400 | Msa0976250 | 0.811326 | 7.404089e-51 | -8.615850e-47 |
| Msa0223100 | Msa0976250 | 0.810228 | 1.279599e-50 | -8.615850e-47 |
| Msa0223290 | Msa0976250 | 0.832206 | 1.078810e-55 | -8.615850e-47 |
| Msa0223380 | Msa0976250 | 0.857474 | 1.592288e-62 | -8.615850e-47 |
| Msa0365490 | Msa0976250 | 0.804964 | 1.677542e-49 | -8.615850e-47 |
| Msa0377530 | Msa0976250 | 0.839385 | 1.635559e-57 | -8.615850e-47 |
| Msa0380040 | Msa0976250 | 0.852498 | 4.437690e-61 | -8.615850e-47 |
| Msa0389810 | Msa0976250 | 0.815838 | 7.529984e-52 | -8.615850e-47 |
| Msa0392070 | Msa0976250 | 0.801495 | 8.763234e-49 | -8.615850e-47 |
| Msa0404030 | Msa0976250 | 0.809793 | 1.587488e-50 | -8.615850e-47 |
| Msa0414950 | Msa0976250 | -0.821331 | 4.273909e-53 | -8.615850e-47 |
| Msa0421780 | Msa0976250 | -0.822724 | 2.032396e-53 | -8.615850e-47 |
| Msa0427200 | Msa0976250 | 0.802369 | 5.795675e-49 | -8.615850e-47 |
| Msa0429290 | Msa0976250 | 0.844323 | 8.115789e-59 | -8.615850e-47 |
| Msa0431670 | Msa0976250 | 0.827379 | 1.616276e-54 | -8.615850e-47 |
| Msa0433530 | Msa0976250 | 0.807297 | 5.413632e-50 | -8.615850e-47 |
| Msa0437710 | Msa0976250 | 0.825383 | 4.829668e-54 | -8.615850e-47 |
| Msa0442850 | Msa0976250 | 0.850901 | 1.258114e-60 | -8.615850e-47 |
| Msa0449760 | Msa0976250 | 0.800377 | 1.482934e-48 | -8.615850e-47 |
| Msa0458440 | Msa0976250 | 0.810339 | 1.210932e-50 | -8.615850e-47 |
| Msa0464900 | Msa0976250 | 0.812967 | 3.247392e-51 | -8.615850e-47 |
| Msa0467900 | Msa0976250 | -0.842744 | 2.145169e-58 | -8.615850e-47 |
| Msa0467960 | Msa0976250 | -0.837341 | 5.502870e-57 | -8.615850e-47 |
| Msa0468130 | Msa0976250 | 0.815512 | 8.902627e-52 | -8.615850e-47 |
| Msa0473240 | Msa0976250 | 0.848386 | 6.333992e-60 | -8.615850e-47 |
| Msa0475580 | Msa0976250 | 0.847238 | 1.312035e-59 | -8.615850e-47 |
| Msa0477260 | Msa0976250 | 0.802843 | 4.627898e-49 | -8.615850e-47 |
| Msa0480320 | Msa0976250 | 0.846101 | 2.682695e-59 | -8.615850e-47 |
| Msa0480600 | Msa0976250 | 0.836524 | 8.897796e-57 | -8.615850e-47 |
| Msa0244270 | Msa0976250 | 0.813114 | 3.015273e-51 | -8.615850e-47 |
| Msa0258760 | Msa0976250 | 0.813160 | 2.945518e-51 | -8.615850e-47 |
| Msa0260210 | Msa0976250 | 0.821602 | 3.700286e-53 | -8.615850e-47 |
| Msa0265820 | Msa0976250 | 0.805429 | 1.340668e-49 | -8.615850e-47 |
| Msa0267760 | Msa0976250 | 0.801638 | 8.193229e-49 | -8.615850e-47 |
| Msa0269450 | Msa0976250 | 0.827187 | 1.796670e-54 | -8.615850e-47 |
| Msa0275030 | Msa0976250 | 0.804535 | 2.061508e-49 | -8.615850e-47 |
| Msa0280570 | Msa0976250 | 0.814209 | 1.731419e-51 | -8.615850e-47 |
| Msa0288730 | Msa0976250 | 0.805075 | 1.590460e-49 | -8.615850e-47 |
| Msa0296760 | Msa0976250 | 0.812696 | 3.723908e-51 | -8.615850e-47 |
| Msa0302650 | Msa0976250 | 0.807387 | 5.182796e-50 | -8.615850e-47 |
| Msa0304290 | Msa0976250 | 0.824562 | 7.545876e-54 | -8.615850e-47 |
| Msa0304330 | Msa0976250 | 0.821194 | 4.597444e-53 | -8.615850e-47 |
| Msa0305890 | Msa0976250 | 0.831710 | 1.430982e-55 | -8.615850e-47 |
| Msa0307830 | Msa0976250 | -0.812090 | 5.050827e-51 | -8.615850e-47 |
| Msa0320100 | Msa0976250 | 0.806115 | 9.621876e-50 | -8.615850e-47 |
| Msa0323080 | Msa0976250 | 0.837263 | 5.763783e-57 | -8.615850e-47 |
| Msa0326670 | Msa0976250 | 0.811691 | 6.167719e-51 | -8.615850e-47 |
| Msa0328210 | Msa0976250 | 0.807508 | 4.884100e-50 | -8.615850e-47 |
| Msa0335040 | Msa0976250 | 0.826928 | 2.072234e-54 | -8.615850e-47 |
| Msa0340810 | Msa0976250 | 0.827626 | 1.410162e-54 | -8.615850e-47 |
| Msa0344830 | Msa0976250 | 0.855248 | 7.165080e-62 | -8.615850e-47 |
| Msa0344870 | Msa0976250 | 0.833429 | 5.360082e-56 | -8.615850e-47 |
| Msa0347360 | Msa0976250 | 0.818186 | 2.235435e-52 | -8.615850e-47 |
| Msa0351030 | Msa0976250 | 0.800226 | 1.591543e-48 | -8.615850e-47 |
| Msa0351080 | Msa0976250 | 0.816685 | 4.868826e-52 | -8.615850e-47 |
| Msa0356890 | Msa0976250 | -0.807869 | 4.094901e-50 | -8.615850e-47 |
| Msa0484780 | Msa0976250 | 0.810782 | 9.711730e-51 | -8.615850e-47 |
| Msa0488270 | Msa0976250 | 0.817713 | 2.859615e-52 | -8.615850e-47 |
| Msa0489610 | Msa0976250 | 0.818546 | 1.852772e-52 | -8.615850e-47 |
| Msa0490350 | Msa0976250 | 0.834930 | 2.254545e-56 | -8.615850e-47 |
| Msa0500720 | Msa0976250 | 0.819955 | 8.847223e-53 | -8.615850e-47 |
| Msa0505060 | Msa0976250 | 0.817610 | 3.016041e-52 | -8.615850e-47 |
| Msa0508200 | Msa0976250 | 0.845113 | 4.972713e-59 | -8.615850e-47 |
| Msa0509970 | Msa0976250 | 0.821819 | 3.296163e-53 | -8.615850e-47 |
| Msa0517490 | Msa0976250 | 0.861910 | 7.359529e-64 | -8.615850e-47 |
| Msa0519220 | Msa0976250 | 0.847291 | 1.268868e-59 | -8.615850e-47 |
| Msa0526710 | Msa0976250 | 0.805854 | 1.091813e-49 | -8.615850e-47 |
| Msa0526890 | Msa0976250 | 0.800392 | 1.472451e-48 | -8.615850e-47 |
| Msa0530850 | Msa0976250 | 0.802067 | 6.689252e-49 | -8.615850e-47 |
| Msa0531990 | Msa0976250 | -0.806528 | 7.872558e-50 | -8.615850e-47 |
| Msa0532100 | Msa0976250 | -0.808891 | 2.478338e-50 | -8.615850e-47 |
| Msa0535030 | Msa0976250 | 0.842992 | 1.842742e-58 | -8.615850e-47 |
| Msa0535060 | Msa0976250 | 0.843726 | 1.173768e-58 | -8.615850e-47 |
| Msa0540070 | Msa0976250 | 0.815107 | 1.095336e-51 | -8.615850e-47 |
| Msa0553220 | Msa0976250 | -0.827453 | 1.551383e-54 | -8.615850e-47 |
| Msa0558690 | Msa0976250 | 0.811349 | 7.318896e-51 | -8.615850e-47 |
| Msa0562440 | Msa0976250 | 0.824166 | 9.349349e-54 | -8.615850e-47 |
| Msa0579290 | Msa0976250 | 0.823566 | 1.292766e-53 | -8.615850e-47 |
| Msa0579390 | Msa0976250 | 0.834810 | 2.417167e-56 | -8.615850e-47 |
| Msa0585900 | Msa0976250 | 0.811745 | 6.002477e-51 | -8.615850e-47 |
| Msa0587690 | Msa0976250 | 0.825965 | 3.514284e-54 | -8.615850e-47 |
| Msa0591060 | Msa0976250 | 0.809284 | 2.041385e-50 | -8.615850e-47 |
| Msa0591770 | Msa0976250 | 0.812928 | 3.312277e-51 | -8.615850e-47 |
| Msa0850960 | Msa0976250 | 0.816128 | 6.487291e-52 | -8.615850e-47 |
| Msa0855430 | Msa0976250 | 0.838972 | 2.092335e-57 | -8.615850e-47 |
| Msa0860410 | Msa0976250 | 0.816055 | 6.733907e-52 | -8.615850e-47 |
| Msa0860900 | Msa0976250 | -0.806991 | 6.285801e-50 | -8.615850e-47 |
| Msa0874500 | Msa0976250 | 0.852361 | 4.856384e-61 | -8.615850e-47 |
| Msa0874570 | Msa0976250 | 0.837569 | 4.810068e-57 | -8.615850e-47 |
| Msa0876200 | Msa0976250 | 0.802254 | 6.120921e-49 | -8.615850e-47 |
| Msa0891040 | Msa0976250 | 0.819677 | 1.024395e-52 | -8.615850e-47 |
| Msa0907070 | Msa0976250 | 0.812577 | 3.953343e-51 | -8.615850e-47 |
| Msa0908170 | Msa0976250 | 0.831895 | 1.287721e-55 | -8.615850e-47 |
| Msa0910980 | Msa0976250 | -0.814517 | 1.480206e-51 | -8.615850e-47 |
| Msa0933440 | Msa0976250 | 0.802635 | 5.109357e-49 | -8.615850e-47 |
| Msa0935850 | Msa0976250 | 0.825914 | 3.615055e-54 | -8.615850e-47 |
| Msa0936270 | Msa0976250 | 0.802369 | 5.797178e-49 | -8.615850e-47 |
| Msa0976250 | Msa0982270 | 0.817958 | 2.516662e-52 | -8.615850e-47 |
| Msa0976250 | Msa0990960 | 0.809106 | 2.229446e-50 | -8.615850e-47 |
| Msa0976250 | Msa0991670 | 0.820206 | 7.751595e-53 | -8.615850e-47 |
| Msa0976250 | Msa0992490 | -0.815475 | 9.072258e-52 | -8.615850e-47 |
| Msa0976250 | Msa1006850 | 0.808739 | 2.671067e-50 | -8.615850e-47 |
| Msa0976250 | Msa1010800 | 0.805060 | 1.602093e-49 | -8.615850e-47 |
| Msa0976250 | Msa1012830 | 0.818244 | 2.168388e-52 | -8.615850e-47 |
| Msa0976250 | Msa1015060 | 0.814257 | 1.689420e-51 | -8.615850e-47 |
| Msa0976250 | Msa1021340 | 0.810147 | 1.331707e-50 | -8.615850e-47 |
| Msa0976250 | Msa1026760 | 0.810135 | 1.339581e-50 | -8.615850e-47 |
| Msa0976250 | Msa1026790 | 0.808053 | 3.741794e-50 | -8.615850e-47 |
| Msa0976250 | Msa1027290 | 0.815992 | 6.957172e-52 | -8.615850e-47 |
| Msa0976250 | Msa1037650 | -0.807880 | 4.072212e-50 | -8.615850e-47 |
| Msa0976250 | Msa1039880 | 0.830482 | 2.865614e-55 | -8.615850e-47 |
| Msa0976250 | Msa1046300 | 0.822291 | 2.562995e-53 | -8.615850e-47 |
| Msa0976250 | Msa1047720 | 0.812451 | 4.211485e-51 | -8.615850e-47 |
| Msa0976250 | Msa1053260 | 0.813925 | 1.999401e-51 | -8.615850e-47 |
| Msa0976250 | Msa1072460 | -0.831885 | 1.295377e-55 | -8.615850e-47 |
| Msa0976250 | Msa1073070 | -0.807983 | 3.871134e-50 | -8.615850e-47 |
| Msa0976250 | Msa1082500 | 0.812236 | 4.693494e-51 | -8.615850e-47 |
| Msa0976250 | Msa1085300 | 0.800508 | 1.394857e-48 | -8.615850e-47 |
| Msa0976250 | Msa1085920 | 0.805614 | 1.225901e-49 | -8.615850e-47 |
| Msa0976250 | Msa1087470 | 0.825537 | 4.441530e-54 | -8.615850e-47 |
| Msa0976250 | Msa1092090 | 0.808162 | 3.547144e-50 | -8.615850e-47 |
| Msa0976250 | Msa1092820 | 0.832109 | 1.140129e-55 | -8.615850e-47 |
| Msa0976250 | Msa1095480 | 0.833274 | 5.858812e-56 | -8.615850e-47 |
| Msa0976250 | Msa1097430 | 0.801122 | 1.045138e-48 | -8.615850e-47 |
| Msa0976250 | Msa1111700 | 0.818665 | 1.741027e-52 | -8.615850e-47 |
| Msa0976250 | Msa1113200 | 0.805951 | 1.041848e-49 | -8.615850e-47 |
| Msa0976250 | Msa1124310 | 0.804592 | 2.006408e-49 | -8.615850e-47 |
| Msa0976250 | Msa1130210 | -0.803498 | 3.388352e-49 | -8.615850e-47 |
| Msa0976250 | Msa1135880 | 0.801941 | 7.100888e-49 | -8.615850e-47 |
| Msa0976250 | Msa1142500 | 0.808349 | 3.235080e-50 | -8.615850e-47 |
| Msa0976250 | Msa1151710 | 0.817476 | 3.233328e-52 | -8.615850e-47 |
| Msa0976250 | Msa1178610 | 0.822915 | 1.834552e-53 | -8.615850e-47 |
| Msa0976250 | Msa1181550 | 0.808300 | 3.314163e-50 | -8.615850e-47 |
| Msa0976250 | Msa1205010 | -0.801963 | 7.025474e-49 | -8.615850e-47 |
| Msa0976250 | Msa1205130 | 0.800398 | 1.468179e-48 | -8.615850e-47 |
| Msa0976250 | Msa1211150 | -0.812444 | 4.227039e-51 | -8.615850e-47 |
| Msa0976250 | Msa1217860 | 0.800942 | 1.137407e-48 | -8.615850e-47 |
| Msa0976250 | Msa1219430 | 0.819959 | 8.829615e-53 | -8.615850e-47 |
| Msa0976250 | Msa1233500 | 0.825835 | 3.773654e-54 | -8.615850e-47 |
| Msa0976250 | Msa1236070 | -0.803390 | 3.566137e-49 | -8.615850e-47 |
| Msa0976250 | Msa1249920 | 0.804904 | 1.726843e-49 | -8.615850e-47 |
| Msa0976250 | Msa1267260 | 0.801745 | 7.788751e-49 | -8.615850e-47 |
| Msa0976250 | Msa1271210 | 0.812561 | 3.984448e-51 | -8.615850e-47 |
| Msa0976250 | Msa1275770 | 0.805190 | 1.504466e-49 | -8.615850e-47 |
| Msa0976250 | Msa1276440 | 0.809798 | 1.583652e-50 | -8.615850e-47 |
| Msa0976250 | Msa1280130 | 0.811862 | 5.661852e-51 | -8.615850e-47 |
| Msa0976250 | Msa1289530 | 0.803856 | 2.855216e-49 | -8.615850e-47 |
| Msa0976250 | Msa1300350 | -0.820663 | 6.090669e-53 | -8.615850e-47 |
| Msa0976250 | Msa1303160 | 0.843196 | 1.626061e-58 | -8.615850e-47 |
| Msa0976250 | Msa1306750 | 0.818765 | 1.652130e-52 | -8.615850e-47 |
| Msa0976250 | Msa1307740 | 0.814640 | 1.389845e-51 | -8.615850e-47 |
| Msa0976250 | Msa1308590 | 0.800109 | 1.681187e-48 | -8.615850e-47 |
| Msa0976250 | Msa1310210 | 0.800130 | 1.664976e-48 | -8.615850e-47 |
| Msa0976250 | Msa1316560 | -0.811584 | 6.507696e-51 | -8.615850e-47 |
| Msa0976250 | Msa1316820 | 0.808752 | 2.653558e-50 | -8.615850e-47 |
| Msa0976250 | Msa1362880 | 0.863516 | 2.354846e-64 | -8.615850e-47 |
| Msa0976250 | Msa1369530 | 0.853510 | 2.278213e-61 | -8.615850e-47 |
| Msa0976250 | Msa1386430 | 0.825827 | 3.791131e-54 | -8.615850e-47 |
| Msa0976250 | Msa1389780 | 0.808365 | 3.210611e-50 | -8.615850e-47 |
| Msa0976250 | Msa1390120 | 0.817608 | 3.018901e-52 | -8.615850e-47 |
| Msa0976250 | Msa1395530 | 0.828439 | 8.984159e-55 | -8.615850e-47 |
| Msa0976250 | Msa1396830 | 0.812428 | 4.261421e-51 | -8.615850e-47 |
| Msa0976250 | Msa1403580 | -0.800910 | 1.154396e-48 | -8.615850e-47 |
| Msa0976250 | Msa1403930 | -0.834792 | 2.441831e-56 | -8.615850e-47 |
| Msa0976250 | Msa1404540 | 0.806783 | 6.955739e-50 | -8.615850e-47 |
| Msa0976250 | Msa1404670 | 0.835569 | 1.555048e-56 | -8.615850e-47 |
| Msa0976250 | Msa1408790 | 0.828333 | 9.529112e-55 | -8.615850e-47 |
| Msa0976250 | Msa1427760 | 0.800088 | 1.697726e-48 | -8.615850e-47 |
| Msa0976250 | Msa1427830 | 0.821832 | 3.273402e-53 | -8.615850e-47 |
| Msa0976250 | Msa1431060 | 0.801867 | 7.351230e-49 | -8.615850e-47 |
| Msa0976250 | Msa1436040 | 0.824078 | 9.806748e-54 | -8.615850e-47 |
| Msa0976250 | Msa1438700 | 0.809901 | 1.504785e-50 | -8.615850e-47 |
| Msa0976250 | Msa1439960 | 0.804149 | 2.480885e-49 | -8.615850e-47 |
| Msa0976250 | Msa1440600 | 0.836633 | 8.347223e-57 | -8.615850e-47 |
| Msa0976250 | Msa1443290 | -0.805208 | 1.491259e-49 | -8.615850e-47 |
| Msa0976250 | Msa1447110 | 0.814565 | 1.444349e-51 | -8.615850e-47 |
| Msa0976250 | Msa1454110 | 0.820495 | 6.654931e-53 | -8.615850e-47 |
| Msa0976250 | Msa1455390 | 0.837590 | 4.752730e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0976250 | MtrunA17_Chr6g0455241 | 97.701 | 87 | 2 | 0 | 19 | 105 | 56 | 142 | 2.32e-60 | 181 |
| Msa0976250 | MtrunA17_Chr6g0455271 | 95.833 | 96 | 4 | 0 | 1 | 96 | 2 | 97 | 2.48e-52 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGCTTGCCTTCTCAAAA+TGG | 0.248342 | 6_4:-10141201 | Msa0976250:CDS |
| TCATGCAGCAAGAATGCTTT+TGG | 0.265450 | 6_4:-10141304 | Msa0976250:CDS |
| ACAACATCATTGAAGATAAA+AGG | 0.287321 | 6_4:-10141390 | Msa0976250:CDS |
| TTGTCTGATCAACAATGATT+TGG | 0.352096 | 6_4:-10141352 | Msa0976250:CDS |
| TAAGTACCACACCTATTGTT+AGG | 0.386678 | 6_4:+10141171 | None:intergenic |
| GTACGATAGCCTTGACGTAT+TGG | 0.444086 | 6_4:+10141222 | None:intergenic |
| CAAACACAAACTGGTAGAAC+TGG | 0.449515 | 6_4:-10141273 | Msa0976250:CDS |
| GATTTGAGTCAAACACAAAC+TGG | 0.464256 | 6_4:-10141282 | Msa0976250:CDS |
| ATGGAGGTGGACCTAACAAT+AGG | 0.486497 | 6_4:-10141182 | Msa0976250:CDS |
| GTAATTGGATCAATAAGATA+AGG | 0.536107 | 6_4:+10141424 | None:intergenic |
| TTGCCTTCTCAAAATGGAGG+TGG | 0.550109 | 6_4:-10141195 | Msa0976250:CDS |
| GCCAAAGAAGAAAATGAACA+AGG | 0.614392 | 6_4:-10141463 | None:intergenic |
| TGCTTGCCTTCTCAAAATGG+AGG | 0.620754 | 6_4:-10141198 | Msa0976250:CDS |
| GGTAGAACTGGTAATAACAA+TGG | 0.632835 | 6_4:-10141261 | Msa0976250:CDS |
| GTTAAGTGTCCAATACGTCA+AGG | 0.658926 | 6_4:-10141231 | Msa0976250:CDS |
| GATAAAAGGTTGTACCTCAG+AGG | 0.662136 | 6_4:-10141376 | Msa0976250:CDS |
| CCAAAGAAGAAAATGAACAA+GGG | 0.665121 | 6_4:-10141462 | None:intergenic |
| GGTGGACCTAACAATAGGTG+TGG | 0.694293 | 6_4:-10141177 | Msa0976250:CDS |
| GTTGATCAGACAATCCTCTG+AGG | 0.737752 | 6_4:+10141362 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GTAATTGGATCAATAAGATA+AGG | + | chr6_4:10141184-10141203 | None:intergenic | 25.0% |
| !!! | TTGTTTTGCTTAGATGTAAT+TGG | + | chr6_4:10141199-10141218 | None:intergenic | 25.0% |
| ! | ACAACATCATTGAAGATAAA+AGG | - | chr6_4:10141215-10141234 | Msa0976250:CDS | 25.0% |
| TTGTCTGATCAACAATGATT+TGG | - | chr6_4:10141253-10141272 | Msa0976250:CDS | 30.0% | |
| GATTTGAGTCAAACACAAAC+TGG | - | chr6_4:10141323-10141342 | Msa0976250:CDS | 35.0% | |
| GGTAGAACTGGTAATAACAA+TGG | - | chr6_4:10141344-10141363 | Msa0976250:CDS | 35.0% | |
| TAAGTACCACACCTATTGTT+AGG | + | chr6_4:10141437-10141456 | None:intergenic | 35.0% | |
| GATAAAAGGTTGTACCTCAG+AGG | - | chr6_4:10141229-10141248 | Msa0976250:CDS | 40.0% | |
| ! | TCATGCAGCAAGAATGCTTT+TGG | - | chr6_4:10141301-10141320 | Msa0976250:CDS | 40.0% |
| CAAACACAAACTGGTAGAAC+TGG | - | chr6_4:10141332-10141351 | Msa0976250:CDS | 40.0% | |
| GTTAAGTGTCCAATACGTCA+AGG | - | chr6_4:10141374-10141393 | Msa0976250:CDS | 40.0% | |
| ACTTGCTTGCCTTCTCAAAA+TGG | - | chr6_4:10141404-10141423 | Msa0976250:CDS | 40.0% | |
| GTTGATCAGACAATCCTCTG+AGG | + | chr6_4:10141246-10141265 | None:intergenic | 45.0% | |
| ! | GTACGATAGCCTTGACGTAT+TGG | + | chr6_4:10141386-10141405 | None:intergenic | 45.0% |
| TGCTTGCCTTCTCAAAATGG+AGG | - | chr6_4:10141407-10141426 | Msa0976250:CDS | 45.0% | |
| TTGCCTTCTCAAAATGGAGG+TGG | - | chr6_4:10141410-10141429 | Msa0976250:CDS | 45.0% | |
| ATGGAGGTGGACCTAACAAT+AGG | - | chr6_4:10141423-10141442 | Msa0976250:CDS | 45.0% | |
| !! | GGTCCACCTCCATTTTGAGA+AGG | + | chr6_4:10141416-10141435 | None:intergenic | 50.0% |
| GGTGGACCTAACAATAGGTG+TGG | - | chr6_4:10141428-10141447 | Msa0976250:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 10141155 | 10141472 | 10141155 | ID=Msa0976250;Name=Msa0976250 |
| chr6_4 | mRNA | 10141155 | 10141472 | 10141155 | ID=Msa0976250-mRNA-1;Parent=Msa0976250;Name=Msa0976250-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|105 |
| chr6_4 | exon | 10141155 | 10141472 | 10141155 | ID=Msa0976250-mRNA-1:exon:3732;Parent=Msa0976250-mRNA-1 |
| chr6_4 | CDS | 10141155 | 10141472 | 10141155 | ID=Msa0976250-mRNA-1:cds;Parent=Msa0976250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
