AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47877


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47877.t1 MTR_8g088560 96.460 452 16 0 1 452 9 460 0.0 908
MS.gene47877.t1 MTR_6g038240 49.220 449 222 3 2 449 11 454 1.47e-159 459
MS.gene47877.t1 MTR_6g038200 49.002 451 224 3 2 451 11 456 1.15e-158 457
MS.gene47877.t1 MTR_6g038220 48.780 451 224 3 2 451 11 455 2.45e-154 446
MS.gene47877.t1 MTR_6g038230 48.559 451 226 3 2 451 11 456 2.85e-154 446
MS.gene47877.t1 MTR_5g035580 46.578 453 233 3 1 452 12 456 1.05e-150 437
MS.gene47877.t1 MTR_6g038300 47.661 449 230 3 2 449 11 455 4.47e-150 435
MS.gene47877.t1 MTR_7g080950 46.000 450 235 3 1 449 5 447 8.60e-148 429
MS.gene47877.t1 MTR_7g080940 46.667 450 232 3 1 449 10 452 7.91e-147 426
MS.gene47877.t1 MTR_5g035560 46.358 453 228 5 1 449 10 451 1.27e-146 427
MS.gene47877.t1 MTR_7g080935 46.444 450 233 3 1 449 10 452 3.69e-146 425
MS.gene47877.t1 MTR_7g080900 44.812 453 238 7 1 449 11 455 7.77e-132 388
MS.gene47877.t1 MTR_8g083290 40.987 466 247 15 2 447 4 461 5.87e-105 320
MS.gene47877.t1 MTR_3g084520 38.947 475 255 13 2 449 6 472 1.53e-102 314
MS.gene47877.t1 MTR_3g049970 37.553 474 261 12 1 450 8 470 6.17e-100 307
MS.gene47877.t1 MTR_3g084530 38.136 472 263 11 2 449 6 472 8.65e-99 304
MS.gene47877.t1 MTR_1g107380 37.259 467 269 8 1 449 12 472 1.01e-98 304
MS.gene47877.t1 MTR_4g095008 36.989 465 267 9 1 449 10 464 2.75e-98 305
MS.gene47877.t1 MTR_3g084540 38.055 473 263 13 2 449 6 473 7.14e-97 300
MS.gene47877.t1 MTR_8g083280 38.559 472 249 13 2 449 7 461 1.17e-95 296
MS.gene47877.t1 MTR_1g107350 35.745 470 277 10 1 451 7 470 2.25e-95 296
MS.gene47877.t1 MTR_1g107315 36.864 472 265 11 2 450 8 469 1.45e-94 294
MS.gene47877.t1 MTR_4g094920 35.914 465 272 9 1 449 25 479 4.37e-89 280
MS.gene47877.t1 MTR_8g064870 34.746 472 279 11 1 450 10 474 1.98e-88 278
MS.gene47877.t1 MTR_1g107360 34.764 466 279 10 1 451 8 463 2.00e-87 275
MS.gene47877.t1 MTR_1g107365 33.405 464 282 7 1 451 44 493 3.09e-87 275
MS.gene47877.t1 MTR_1g107375 34.125 463 279 9 1 451 7 455 4.47e-87 273
MS.gene47877.t1 MTR_1g032490 35.745 470 277 10 1 451 9 472 5.50e-87 274
MS.gene47877.t1 MTR_8g064880 35.368 475 276 12 1 450 8 476 2.59e-86 272
MS.gene47877.t1 MTR_7g080960 34.286 490 251 9 1 449 11 470 1.40e-85 270
MS.gene47877.t1 MTR_5g016480 34.737 475 273 15 1 449 7 470 7.53e-84 266
MS.gene47877.t1 MTR_1g107285 32.484 471 286 12 1 451 7 465 2.09e-80 257
MS.gene47877.t1 MTR_0036s0220 34.238 479 272 15 2 449 12 478 1.64e-74 241
MS.gene47877.t1 MTR_5g464810 33.191 467 269 14 2 437 12 466 1.18e-71 234
MS.gene47877.t1 MTR_5g064240 33.191 467 269 14 2 437 12 466 1.18e-71 234
MS.gene47877.t1 MTR_6g014290 31.866 477 287 15 2 449 10 477 1.11e-68 226
MS.gene47877.t1 MTR_2g008210 31.667 480 282 14 2 449 11 476 1.12e-67 224
MS.gene47877.t1 MTR_5g464760 31.042 480 287 15 2 449 12 479 1.90e-66 221
MS.gene47877.t1 MTR_7g011470 32.473 465 288 13 2 449 10 465 6.02e-66 219
MS.gene47877.t1 MTR_3g008010 31.601 481 283 18 2 449 10 477 8.37e-66 219
MS.gene47877.t1 MTR_4g094220 32.716 486 277 13 2 450 7 479 1.63e-65 218
MS.gene47877.t1 MTR_5g031840 32.627 472 285 15 2 452 5 464 2.09e-65 217
MS.gene47877.t1 MTR_7g013180 30.851 470 277 11 2 451 5 446 2.04e-64 214
MS.gene47877.t1 MTR_6g014250 30.271 479 292 13 2 449 10 477 2.20e-64 215
MS.gene47877.t1 MTR_6g014220 30.398 477 294 13 2 449 10 477 4.12e-64 214
MS.gene47877.t1 MTR_7g011470 32.473 465 284 14 2 449 10 461 4.28e-64 214
MS.gene47877.t1 MTR_3g069690 33.906 466 260 20 2 446 8 446 5.96e-64 213
MS.gene47877.t1 MTR_6g014040 30.913 482 288 15 2 449 10 480 1.14e-63 213
MS.gene47877.t1 MTR_8g059425 30.042 476 297 12 2 449 10 477 1.60e-63 213
MS.gene47877.t1 MTR_5g031860 34.100 478 271 19 2 452 12 472 1.71e-62 210
MS.gene47877.t1 MTR_3g479490 29.278 485 295 14 1 451 5 475 9.08e-62 208
MS.gene47877.t1 MTR_6g014270 29.485 485 292 14 2 449 7 478 1.78e-61 207
MS.gene47877.t1 MTR_5g031830 33.753 477 275 17 2 452 12 473 2.39e-61 207
MS.gene47877.t1 MTR_5g072860 30.769 468 284 14 2 449 18 465 3.36e-61 206
MS.gene47877.t1 MTR_3g031450 32.059 471 266 15 2 452 18 454 3.46e-61 206
MS.gene47877.t1 MTR_3g031400 31.983 469 267 14 2 452 18 452 9.84e-61 205
MS.gene47877.t1 MTR_3g479520 29.314 481 294 15 2 449 15 482 5.80e-60 204
MS.gene47877.t1 MTR_3g079480 28.898 481 296 15 2 449 21 488 1.10e-59 203
MS.gene47877.t1 MTR_5g075440 28.936 470 288 12 2 449 10 455 3.09e-59 201
MS.gene47877.t1 MTR_6g013960 29.796 490 282 16 2 449 10 479 4.89e-59 201
MS.gene47877.t1 MTR_6g013450 30.165 484 289 16 2 449 10 480 3.05e-58 199
MS.gene47877.t1 MTR_0288s0020 29.218 486 271 15 2 449 10 460 3.60e-58 198
MS.gene47877.t1 MTR_7g013240 30.108 465 273 13 2 447 6 437 7.87e-58 197
MS.gene47877.t1 MTR_6g011340 30.123 488 283 13 2 449 10 479 1.32e-57 197
MS.gene47877.t1 MTR_7g013200 28.947 456 291 8 2 447 5 437 2.44e-57 195
MS.gene47877.t1 MTR_6g014310 29.124 491 284 16 2 449 11 480 2.44e-57 196
MS.gene47877.t1 MTR_6g013990 30.328 488 280 19 2 449 10 477 2.62e-57 196
MS.gene47877.t1 MTR_6g014150 29.814 483 291 15 2 449 7 476 4.81e-57 196
MS.gene47877.t1 MTR_3g069710 31.749 463 276 15 3 449 13 451 5.28e-57 195
MS.gene47877.t1 MTR_6g014200 30.228 483 289 15 2 449 7 476 1.03e-56 195
MS.gene47877.t1 MTR_6g014050 30.021 483 290 14 2 449 11 480 1.11e-56 195
MS.gene47877.t1 MTR_6g014020 29.012 486 291 14 2 449 10 479 1.17e-56 195
MS.gene47877.t1 MTR_7g070610 30.943 488 287 15 1 450 12 487 1.35e-56 195
MS.gene47877.t1 MTR_6g014170 29.072 485 274 13 2 449 10 461 3.64e-56 193
MS.gene47877.t1 MTR_5g072810 27.837 467 293 11 2 449 12 453 6.44e-56 192
MS.gene47877.t1 MTR_7g070780 30.101 495 281 15 1 450 10 484 4.56e-55 191
MS.gene47877.t1 MTR_3g479470 28.302 477 301 15 2 448 13 478 4.67e-55 191
MS.gene47877.t1 MTR_7g070660 29.899 495 278 18 1 450 10 480 7.37e-55 190
MS.gene47877.t1 MTR_7g013260 30.501 459 278 13 2 446 6 437 8.36e-55 189
MS.gene47877.t1 MTR_6g014187 28.395 486 294 14 2 449 10 479 1.24e-54 189
MS.gene47877.t1 MTR_4g064987 31.435 474 261 17 2 446 8 446 1.61e-54 188
MS.gene47877.t1 MTR_7g013220 28.753 473 287 13 2 450 5 451 3.61e-54 187
MS.gene47877.t1 MTR_6g013440 28.067 481 302 15 2 449 11 480 4.90e-54 188
MS.gene47877.t1 MTR_4g064987 31.343 469 262 17 2 446 8 440 5.70e-54 187
MS.gene47877.t1 MTR_6g013920 29.545 484 290 18 2 449 10 478 1.27e-53 187
MS.gene47877.t1 MTR_5g058320 29.106 481 282 16 2 449 10 464 1.34e-53 186
MS.gene47877.t1 MTR_5g072830 27.451 459 302 10 2 449 10 448 2.59e-53 185
MS.gene47877.t1 MTR_5g098960 29.742 427 272 11 3 417 8 418 4.03e-53 185
MS.gene47877.t1 MTR_6g014300 29.508 488 270 20 2 449 12 465 4.26e-53 185
MS.gene47877.t1 MTR_7g071040 30.000 490 289 14 1 450 16 491 9.85e-53 185
MS.gene47877.t1 MTR_0184s0030 29.167 480 294 14 1 450 5 468 2.24e-52 183
MS.gene47877.t1 MTR_6g013900 27.629 485 298 14 2 449 10 478 5.17e-52 182
MS.gene47877.t1 MTR_7g117170 29.979 487 262 14 3 443 16 469 1.26e-51 181
MS.gene47877.t1 MTR_4g485630 28.986 483 294 16 1 450 8 474 1.26e-51 181
MS.gene47877.t1 MTR_8g066610 28.926 484 297 17 1 450 8 478 1.57e-51 181
MS.gene47877.t1 MTR_8g027885 30.126 478 273 13 3 446 19 469 3.59e-51 180
MS.gene47877.t1 MTR_7g070800 29.880 502 270 19 1 450 5 476 1.09e-50 179
MS.gene47877.t1 MTR_7g070740 29.065 492 290 16 1 450 10 484 3.00e-50 178
MS.gene47877.t1 MTR_7g102550 31.062 499 269 17 2 448 9 484 6.10e-50 177
MS.gene47877.t1 MTR_7g070940 30.101 495 272 19 1 450 8 473 8.13e-50 176
MS.gene47877.t1 MTR_4g108250 28.571 497 290 18 1 450 10 488 8.43e-50 177
MS.gene47877.t1 MTR_5g072820 25.974 462 305 10 2 449 10 448 3.88e-49 174
MS.gene47877.t1 MTR_5g045970 29.899 495 284 19 1 449 15 492 5.11e-49 175
MS.gene47877.t1 MTR_7g070930 30.279 502 272 19 1 450 13 488 8.69e-49 174
MS.gene47877.t1 MTR_6g005600 30.085 472 274 14 2 438 6 456 9.12e-49 173
MS.gene47877.t1 MTR_5g072840 27.015 459 304 11 2 449 10 448 9.84e-49 173
MS.gene47877.t1 MTR_5g016660 30.103 485 289 15 4 450 12 484 5.05e-48 172
MS.gene47877.t1 MTR_8g027870 28.690 481 276 13 3 446 19 469 3.29e-47 169
MS.gene47877.t1 MTR_0184s0040 27.615 478 298 12 1 448 20 479 3.55e-47 169
MS.gene47877.t1 MTR_0078s0190 27.615 478 298 12 1 448 20 479 3.55e-47 169
MS.gene47877.t1 MTR_7g047030 28.024 496 278 13 2 451 6 468 3.77e-47 169
MS.gene47877.t1 MTR_7g047270 28.024 496 278 13 2 451 6 468 3.77e-47 169
MS.gene47877.t1 MTR_7g070860 29.817 493 268 19 1 450 6 463 4.48e-47 169
MS.gene47877.t1 MTR_8g008990 30.000 480 283 14 1 446 5 465 6.43e-47 168
MS.gene47877.t1 MTR_8g009055 28.719 484 282 13 1 446 5 463 8.00e-47 168
MS.gene47877.t1 MTR_8g006260 28.875 471 283 12 2 438 6 458 1.01e-46 168
MS.gene47877.t1 MTR_4g031800 28.953 487 286 19 1 449 8 472 1.45e-46 168
MS.gene47877.t1 MTR_4g117960 28.543 494 289 20 1 451 10 482 1.70e-46 167
MS.gene47877.t1 MTR_8g465670 29.652 489 270 18 3 446 8 467 1.72e-46 167
MS.gene47877.t1 MTR_7g055710 29.485 485 293 18 1 448 10 482 1.87e-46 167
MS.gene47877.t1 MTR_8g009050 29.339 484 279 15 1 446 5 463 2.50e-46 167
MS.gene47877.t1 MTR_7g102490 29.124 491 298 17 1 451 8 488 3.12e-46 167
MS.gene47877.t1 MTR_7g070910 28.831 496 287 18 1 450 10 485 1.08e-45 166
MS.gene47877.t1 MTR_6g033675 35.764 288 169 8 159 438 174 453 1.12e-45 165
MS.gene47877.t1 MTR_5g040030 27.950 483 308 15 1 450 13 488 5.00e-45 164
MS.gene47877.t1 MTR_0536s0020 27.049 488 290 16 3 450 19 480 6.16e-45 163
MS.gene47877.t1 MTR_0078s0010 27.216 485 294 13 2 450 6 467 7.77e-45 163
MS.gene47877.t1 MTR_6g014240 27.521 476 283 16 1 449 6 446 8.61e-45 162
MS.gene47877.t1 MTR_8g012635 28.659 492 273 16 2 445 6 467 9.53e-45 162
MS.gene47877.t1 MTR_7g070810 29.006 493 283 19 1 450 8 476 1.14e-44 162
MS.gene47877.t1 MTR_5g072850 30.617 454 227 18 2 449 10 381 1.23e-44 160
MS.gene47877.t1 MTR_4g128720 26.840 462 299 11 1 446 14 452 1.80e-44 161
MS.gene47877.t1 MTR_7g102460 28.942 501 284 22 1 451 8 486 2.43e-44 162
MS.gene47877.t1 MTR_5g070090 29.607 483 279 17 2 452 11 464 2.46e-44 161
MS.gene47877.t1 MTR_8g009073 28.571 483 282 14 1 446 5 461 3.05e-44 161
MS.gene47877.t1 MTR_2g035020 27.835 485 307 16 1 452 10 484 4.10e-44 161
MS.gene47877.t1 MTR_6g033725 27.234 470 284 17 3 438 5 450 4.41e-44 161
MS.gene47877.t1 MTR_4g485640 28.998 469 277 15 12 447 219 664 5.68e-44 164
MS.gene47877.t1 MTR_4g117890 26.337 486 298 13 3 451 14 476 6.26e-44 160
MS.gene47877.t1 MTR_8g077590 29.158 487 271 17 2 446 9 463 6.32e-44 160
MS.gene47877.t1 MTR_4g128690 26.949 449 296 11 1 438 14 441 6.79e-44 160
MS.gene47877.t1 MTR_4g117950 27.386 482 297 17 1 451 5 464 8.16e-44 160
MS.gene47877.t1 MTR_4g485620 29.764 467 280 18 16 449 3 454 1.07e-43 159
MS.gene47877.t1 MTR_8g009063 27.859 481 288 14 1 445 12 469 1.08e-43 160
MS.gene47877.t1 MTR_3g009510 27.310 487 294 14 3 447 6 474 1.60e-43 159
MS.gene47877.t1 MTR_6g035295 28.306 484 304 14 1 450 11 485 1.69e-43 159
MS.gene47877.t1 MTR_8g009067 28.690 481 284 13 1 446 5 461 1.89e-43 159
MS.gene47877.t1 MTR_3g479610 30.464 302 189 8 159 449 21 312 2.06e-43 155
MS.gene47877.t1 MTR_1g019510 26.514 479 296 12 1 446 5 460 2.72e-43 159
MS.gene47877.t1 MTR_8g012650 28.337 487 289 16 2 449 6 471 3.62e-43 158
MS.gene47877.t1 MTR_5g070040 37.586 290 139 12 178 447 197 464 4.96e-43 158
MS.gene47877.t1 MTR_8g012745 27.403 489 290 15 2 450 6 469 6.32e-43 157
MS.gene47877.t1 MTR_8g006710 28.041 485 287 16 3 450 7 466 1.47e-42 156
MS.gene47877.t1 MTR_1g062380 27.976 504 283 19 1 449 15 493 1.89e-42 157
MS.gene47877.t1 MTR_8g006220 29.234 496 272 18 3 446 7 475 4.28e-42 155
MS.gene47877.t1 MTR_5g039900 28.247 485 301 17 1 450 12 484 4.87e-42 155
MS.gene47877.t1 MTR_8g008970 28.008 482 286 14 1 446 5 461 6.43e-42 159
MS.gene47877.t1 MTR_8g008970 31.599 269 164 5 184 446 531 785 6.91e-31 126
MS.gene47877.t1 MTR_6g014190 31.142 289 185 7 167 449 6 286 7.44e-42 150
MS.gene47877.t1 MTR_7g117405 29.545 484 290 19 2 449 12 480 9.08e-42 155
MS.gene47877.t1 MTR_6g488280 28.511 470 278 17 3 437 7 453 9.51e-42 154
MS.gene47877.t1 MTR_0428s0010 28.511 470 278 17 3 437 7 453 9.51e-42 154
MS.gene47877.t1 MTR_6g033625 27.557 479 302 14 3 452 5 467 1.40e-41 154
MS.gene47877.t1 MTR_4g117980 28.106 491 288 16 5 451 14 483 1.66e-41 154
MS.gene47877.t1 MTR_0891s0010 29.492 295 189 7 165 449 4 289 2.03e-41 149
MS.gene47877.t1 MTR_7g102450 28.660 485 285 18 2 449 11 471 2.11e-41 154
MS.gene47877.t1 MTR_8g006730 26.971 482 297 16 2 449 6 466 2.95e-41 153
MS.gene47877.t1 MTR_5g045960 28.049 492 297 22 1 449 8 485 3.18e-41 153
MS.gene47877.t1 MTR_7g071050 26.638 473 260 15 1 445 12 425 3.74e-41 152
MS.gene47877.t1 MTR_6g035185 26.008 496 293 18 5 451 14 484 3.87e-41 153
MS.gene47877.t1 MTR_1g029540 26.623 462 303 12 7 451 19 461 4.33e-41 152
MS.gene47877.t1 MTR_2g034990 26.694 487 308 17 1 451 10 483 4.69e-41 153
MS.gene47877.t1 MTR_5g067170 27.824 478 304 16 5 451 14 481 2.50e-40 151
MS.gene47877.t1 MTR_0078s0060 26.572 493 288 16 1 450 5 466 2.55e-40 150
MS.gene47877.t1 MTR_8g009067 29.330 358 210 9 115 446 3 343 2.69e-40 148
MS.gene47877.t1 MTR_4g118000 26.598 485 287 17 5 451 15 468 3.04e-40 150
MS.gene47877.t1 MTR_5g004940 38.208 212 106 3 246 451 187 379 4.28e-40 148
MS.gene47877.t1 MTR_5g004940 32.203 177 103 5 2 166 17 188 1.38e-24 105
MS.gene47877.t1 MTR_7g046490 27.140 479 291 12 2 446 6 460 4.68e-40 150
MS.gene47877.t1 MTR_5g087620 26.844 488 313 14 2 449 10 493 1.00e-39 149
MS.gene47877.t1 MTR_6g035265 27.216 485 292 16 5 451 14 475 1.21e-39 149
MS.gene47877.t1 MTR_6g023665 27.331 472 281 17 3 437 14 460 2.48e-39 148
MS.gene47877.t1 MTR_0477s0010 36.715 207 121 4 247 449 116 316 2.66e-39 144
MS.gene47877.t1 MTR_4g008630 26.582 474 299 15 3 451 15 464 4.17e-39 147
MS.gene47877.t1 MTR_8g007585 36.715 207 121 4 247 449 191 391 4.35e-39 145
MS.gene47877.t1 MTR_6g033615 31.546 317 177 8 138 438 147 439 6.28e-39 146
MS.gene47877.t1 MTR_8g032950 26.749 486 309 15 1 452 11 483 1.62e-38 146
MS.gene47877.t1 MTR_5g029800 26.337 486 307 15 1 451 10 479 1.99e-38 145
MS.gene47877.t1 MTR_4g024020 27.565 497 295 17 1 449 8 487 2.89e-38 145
MS.gene47877.t1 MTR_4g485590 28.702 439 250 14 2 415 9 409 2.91e-38 144
MS.gene47877.t1 MTR_6g033660 30.625 320 184 10 138 438 152 452 4.14e-38 144
MS.gene47877.t1 MTR_8g090095 24.742 485 292 15 7 451 30 481 9.69e-38 144
MS.gene47877.t1 MTR_2g035040 28.571 378 228 13 104 451 23 388 1.20e-37 142
MS.gene47877.t1 MTR_8g006270 30.133 375 211 10 105 448 108 462 1.55e-37 143
MS.gene47877.t1 MTR_0009s0240 26.653 484 291 15 2 451 7 460 2.62e-37 142
MS.gene47877.t1 MTR_6g014186 25.156 481 278 16 2 449 7 438 3.08e-37 141
MS.gene47877.t1 MTR_8g466240 25.482 467 308 15 2 449 8 453 6.59e-37 141
MS.gene47877.t1 MTR_4g082820 27.551 490 284 22 1 450 6 464 8.45e-37 140
MS.gene47877.t1 MTR_5g090660 25.873 487 299 13 2 447 5 470 1.69e-36 141
MS.gene47877.t1 MTR_7g102560 27.459 488 303 18 1 449 8 483 1.75e-36 140
MS.gene47877.t1 MTR_0536s0010 24.580 476 317 13 1 451 20 478 4.81e-36 139
MS.gene47877.t1 MTR_5g019580 27.801 482 292 14 1 442 6 471 5.82e-36 139
MS.gene47877.t1 MTR_5g090700 26.166 493 276 17 2 438 5 465 9.05e-36 138
MS.gene47877.t1 MTR_8g043470 27.174 368 203 9 103 449 54 377 1.27e-35 136
MS.gene47877.t1 MTR_8g009073 29.773 309 186 8 156 446 37 332 2.35e-35 134
MS.gene47877.t1 MTR_8g074550 24.851 503 289 15 2 443 8 482 5.67e-35 136
MS.gene47877.t1 MTR_7g102520 27.565 497 299 16 1 452 11 491 1.62e-34 135
MS.gene47877.t1 MTR_5g090620 24.746 493 300 14 2 447 5 473 2.22e-34 134
MS.gene47877.t1 MTR_1g040310 26.423 492 299 19 1 450 14 484 6.19e-34 133
MS.gene47877.t1 MTR_5g090630 26.008 496 280 15 2 447 5 463 6.76e-34 132
MS.gene47877.t1 MTR_7g012120 24.597 496 304 17 1 451 15 485 6.91e-34 133
MS.gene47877.t1 MTR_7g067330 26.742 445 251 18 1 421 8 401 8.91e-34 132
MS.gene47877.t1 MTR_5g090600 25.641 468 305 14 2 447 5 451 9.14e-34 132
MS.gene47877.t1 MTR_8g044140 28.010 382 231 13 100 450 81 449 1.01e-33 132
MS.gene47877.t1 MTR_8g012730 30.868 311 160 7 157 445 27 304 2.25e-33 128
MS.gene47877.t1 MTR_2g059240 26.042 480 299 16 2 449 13 468 2.42e-33 131
MS.gene47877.t1 MTR_5g090580 25.400 500 287 16 2 447 5 472 2.75e-33 131
MS.gene47877.t1 MTR_7g067120 26.915 457 279 16 1 443 8 423 2.79e-33 130
MS.gene47877.t1 MTR_7g039550 33.585 265 154 8 204 450 2 262 4.40e-33 126
MS.gene47877.t1 MTR_2g098430 27.033 492 301 18 3 452 7 482 4.80e-33 130
MS.gene47877.t1 MTR_8g071070 24.797 492 300 15 2 451 7 470 5.52e-33 130
MS.gene47877.t1 MTR_5g098930 25.000 488 281 16 1 438 4 456 5.66e-33 130
MS.gene47877.t1 MTR_5g019580 31.646 316 173 8 156 442 194 495 6.05e-33 130
MS.gene47877.t1 MTR_1g107325 41.844 141 80 1 313 451 214 354 1.63e-32 127
MS.gene47877.t1 MTR_7g070870 26.875 480 283 20 1 450 18 459 2.51e-32 128
MS.gene47877.t1 MTR_2g040530 24.583 480 314 14 2 451 5 466 3.79e-32 127
MS.gene47877.t1 MTR_5g090670 24.847 491 303 15 2 447 5 474 8.20e-32 127
MS.gene47877.t1 MTR_1g019520 33.810 210 124 3 256 450 4 213 8.47e-32 121
MS.gene47877.t1 MTR_8g007565 27.959 490 281 19 1 450 6 463 2.68e-31 125
MS.gene47877.t1 MTR_8g012630 35.096 208 117 4 256 445 204 411 3.95e-31 124
MS.gene47877.t1 MTR_8g007650 27.959 490 281 19 1 450 6 463 5.00e-31 124
MS.gene47877.t1 MTR_7g470610 36.585 246 140 9 167 401 44 284 1.35e-30 120
MS.gene47877.t1 MTR_7g070583 36.585 246 140 9 167 401 44 284 1.35e-30 120
MS.gene47877.t1 MTR_5g066410 27.549 461 297 12 5 450 1 439 1.43e-30 123
MS.gene47877.t1 MTR_4g082810 34.855 241 121 10 159 379 172 396 5.43e-30 120
MS.gene47877.t1 MTR_5g027210 25.417 480 270 16 3 422 5 456 5.98e-30 122
MS.gene47877.t1 MTR_2086s0010 34.104 173 103 3 282 449 5 171 1.01e-29 114
MS.gene47877.t1 MTR_1996s0010 34.104 173 103 3 282 449 5 171 1.01e-29 114
MS.gene47877.t1 MTR_6g013680 27.793 367 186 14 102 449 68 374 1.09e-28 116
MS.gene47877.t1 MTR_5g090610 25.462 487 295 17 2 450 5 461 3.10e-28 116
MS.gene47877.t1 MTR_2g046750 24.494 494 300 17 1 451 4 467 5.26e-28 116
MS.gene47877.t1 MTR_2g046820 25.000 488 302 17 1 451 4 464 7.14e-28 115
MS.gene47877.t1 MTR_6g078320 23.589 496 306 18 2 450 11 480 1.84e-27 114
MS.gene47877.t1 MTR_8g068330 25.720 486 300 17 1 451 7 466 2.03e-27 114
MS.gene47877.t1 MTR_3g009490 34.783 184 102 4 282 447 3 186 3.99e-27 107
MS.gene47877.t1 MTR_8g068360 24.033 491 299 20 1 450 11 468 1.30e-26 112
MS.gene47877.t1 MTR_6g014185 31.048 248 132 9 194 438 121 332 4.58e-26 108
MS.gene47877.t1 MTR_8g009840 34.021 194 104 5 273 446 333 522 9.11e-26 110
MS.gene47877.t1 MTR_8g068340 26.724 464 279 20 1 429 11 448 1.37e-25 109
MS.gene47877.t1 MTR_5g066390 36.306 157 90 4 297 449 64 214 2.39e-25 103
MS.gene47877.t1 MTR_4g079270 25.223 448 300 15 1 429 7 438 1.24e-24 106
MS.gene47877.t1 MTR_2g046620 24.053 449 286 14 1 422 15 435 6.44e-24 104
MS.gene47877.t1 MTR_4g123553 23.465 456 280 14 1 422 14 434 1.04e-23 103
MS.gene47877.t1 MTR_2g008225 22.637 455 292 13 1 423 14 440 1.17e-23 103
MS.gene47877.t1 MTR_6g042310 24.086 465 320 14 1 451 17 462 5.02e-23 101
MS.gene47877.t1 MTR_1g107340 25.926 243 166 4 1 232 7 246 1.06e-22 97.4
MS.gene47877.t1 MTR_2g008226 23.632 457 294 14 1 423 9 444 1.62e-22 100
MS.gene47877.t1 MTR_2g008220 23.026 456 289 15 1 423 13 439 4.64e-22 99.0
MS.gene47877.t1 MTR_4g079250 24.781 456 292 15 1 429 7 438 5.55e-22 98.6
MS.gene47877.t1 MTR_1g090270 24.094 469 281 18 1 430 14 446 6.45e-22 98.2
MS.gene47877.t1 MTR_6g014160 27.368 285 164 6 102 372 103 358 1.75e-21 96.3
MS.gene47877.t1 MTR_2g014900 23.395 483 298 17 2 449 7 452 3.24e-21 96.3
MS.gene47877.t1 MTR_6g036650 23.673 452 293 15 1 423 17 445 1.72e-20 94.0
MS.gene47877.t1 MTR_2g083430 24.689 482 282 20 1 440 7 449 3.99e-20 92.8
MS.gene47877.t1 MTR_8g056740 29.779 272 147 9 155 388 36 301 5.08e-20 92.0
MS.gene47877.t1 MTR_2g083490 25.439 456 289 17 1 429 7 438 5.90e-20 92.4
MS.gene47877.t1 MTR_8g083300 37.681 138 77 4 3 136 8 140 7.69e-20 86.7
MS.gene47877.t1 MTR_7g070995 36.552 145 81 3 317 450 1 145 7.91e-20 86.7
MS.gene47877.t1 MTR_6g014000 33.333 126 80 1 320 445 30 151 8.48e-20 92.0
MS.gene47877.t1 MTR_4g059370 27.490 251 155 6 193 430 137 373 1.75e-19 90.5
MS.gene47877.t1 MTR_7g070760 30.841 214 121 4 182 393 18 206 2.23e-19 86.7
MS.gene47877.t1 MTR_2g083480 24.893 466 279 19 1 429 7 438 1.26e-18 88.2
MS.gene47877.t1 MTR_0536s0030 31.210 157 97 3 305 450 196 352 2.00e-18 87.0
MS.gene47877.t1 MTR_6g013435 23.986 296 170 9 159 449 61 306 3.76e-18 85.5
MS.gene47877.t1 MTR_2g083380 25.702 463 279 19 1 429 24 455 1.26e-17 85.5
MS.gene47877.t1 MTR_4g077960 26.957 230 157 6 197 422 189 411 2.74e-17 84.3
MS.gene47877.t1 MTR_3g435310 28.962 183 123 4 242 422 216 393 4.15e-17 83.6
MS.gene47877.t1 MTR_0078s0200 24.522 314 210 9 1 301 5 304 5.45e-16 79.0
MS.gene47877.t1 MTR_3g479620 32.051 156 95 5 2 149 6 158 1.06e-14 72.4
MS.gene47877.t1 MTR_5g090690 26.857 175 90 3 256 412 191 345 1.35e-13 72.4
MS.gene47877.t1 MTR_0199s0010 26.141 241 146 10 2 216 10 244 2.07e-13 70.9
MS.gene47877.t1 MTR_1g090280 26.263 198 124 6 254 430 100 296 1.97e-12 68.2
MS.gene47877.t1 MTR_8g006230 31.081 222 95 10 106 301 55 244 9.69e-12 65.9
MS.gene47877.t1 MTR_0184s0010 32.222 90 61 0 359 448 4 93 9.58e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47877.t1 AT2G43840 52.643 454 197 7 2 450 7 447 1.01e-170 487
MS.gene47877.t1 AT2G43840 52.423 454 198 7 2 450 7 447 9.63e-170 484
MS.gene47877.t1 AT2G43820 51.542 454 202 7 2 450 7 447 9.18e-166 474
MS.gene47877.t1 AT2G31790 44.371 453 237 6 2 446 8 453 4.42e-135 397
MS.gene47877.t1 AT1G05675 44.346 451 240 5 2 447 6 450 2.87e-133 392
MS.gene47877.t1 AT1G05680 44.105 458 231 7 2 447 6 450 2.26e-132 390
MS.gene47877.t1 AT2G31750 44.348 460 237 9 2 452 8 457 7.49e-123 367
MS.gene47877.t1 AT2G31750 44.227 459 237 9 2 451 8 456 7.59e-123 365
MS.gene47877.t1 AT1G24100 40.564 461 252 10 2 451 11 460 8.11e-112 337
MS.gene47877.t1 AT4G15480 34.188 468 282 8 1 449 18 478 2.91e-104 319
MS.gene47877.t1 AT3G21560 36.285 463 278 8 2 449 12 472 2.37e-102 314
MS.gene47877.t1 AT4G15490 35.805 472 266 14 2 449 8 466 1.33e-100 309
MS.gene47877.t1 AT4G15550 35.802 486 247 13 2 448 13 472 2.04e-94 293
MS.gene47877.t1 AT1G05560 35.470 468 261 10 2 449 5 451 3.91e-93 290
MS.gene47877.t1 AT1G05560 35.470 468 261 10 2 449 55 501 7.81e-93 290
MS.gene47877.t1 AT4G15500 34.205 459 286 9 2 449 9 462 8.35e-92 286
MS.gene47877.t1 AT1G05530 36.364 462 268 9 2 449 5 454 9.47e-92 285
MS.gene47877.t1 AT4G14090 37.093 461 257 12 2 448 13 454 7.29e-89 278
MS.gene47877.t1 AT2G23260 34.211 456 280 10 2 449 10 453 1.17e-85 270
MS.gene47877.t1 AT2G23250 34.146 451 275 9 5 449 1 435 4.62e-83 263
MS.gene47877.t1 AT1G22360 33.613 476 280 14 2 449 10 477 1.33e-78 252
MS.gene47877.t1 AT1G22400 32.985 479 280 16 2 449 13 481 2.83e-76 246
MS.gene47877.t1 AT1G22380 32.917 480 278 17 2 449 13 480 1.35e-71 234
MS.gene47877.t1 AT1G22360 32.353 476 274 14 2 449 10 465 8.87e-71 231
MS.gene47877.t1 AT1G22340 32.008 478 286 12 2 449 13 481 3.64e-70 230
MS.gene47877.t1 AT1G22370 32.773 476 279 16 2 449 13 475 8.23e-65 216
MS.gene47877.t1 AT1G78270 31.042 480 287 13 2 449 13 480 1.18e-64 216
MS.gene47877.t1 AT2G36970 28.632 475 300 12 2 450 10 471 4.14e-62 209
MS.gene47877.t1 AT5G59590 29.851 469 279 13 2 449 10 449 4.40e-60 203
MS.gene47877.t1 AT3G02100 29.522 481 274 14 2 450 13 460 2.08e-59 201
MS.gene47877.t1 AT5G59580 30.704 469 276 14 2 450 9 448 9.54e-59 199
MS.gene47877.t1 AT2G30140 30.769 468 274 16 2 449 13 450 1.69e-58 199
MS.gene47877.t1 AT2G28080 28.139 462 302 10 6 449 22 471 2.99e-58 199
MS.gene47877.t1 AT2G30140 30.490 469 275 16 2 449 13 451 4.48e-58 198
MS.gene47877.t1 AT3G46670 32.000 475 263 15 2 450 9 449 1.13e-57 197
MS.gene47877.t1 AT5G38010 29.892 465 288 13 2 449 10 453 4.72e-57 195
MS.gene47877.t1 AT3G46660 30.258 466 283 12 3 450 15 456 7.53e-57 194
MS.gene47877.t1 AT2G15480 28.041 485 300 14 1 449 9 480 1.05e-56 195
MS.gene47877.t1 AT2G15490 28.099 484 301 14 1 449 6 477 2.84e-56 194
MS.gene47877.t1 AT2G30150 27.505 469 294 12 2 451 13 454 3.71e-55 190
MS.gene47877.t1 AT2G15490 28.131 487 300 14 1 449 6 480 4.41e-55 191
MS.gene47877.t1 AT2G15480 27.677 495 299 16 1 449 9 490 5.73e-54 188
MS.gene47877.t1 AT2G30150 27.115 461 298 11 6 451 1 438 1.64e-53 185
MS.gene47877.t1 AT5G38040 30.702 456 276 14 10 449 18 449 8.79e-53 184
MS.gene47877.t1 AT5G05870 29.724 471 284 14 2 449 8 454 1.89e-52 183
MS.gene47877.t1 AT5G17050 28.238 471 289 12 2 449 12 456 2.28e-52 183
MS.gene47877.t1 AT5G14860 28.745 494 286 16 2 452 8 478 1.54e-50 179
MS.gene47877.t1 AT1G10400 27.368 475 301 13 1 449 6 462 1.77e-50 178
MS.gene47877.t1 AT5G05880 30.407 467 278 16 1 447 7 446 2.75e-50 177
MS.gene47877.t1 AT1G01420 30.233 473 281 15 2 444 8 461 3.46e-50 177
MS.gene47877.t1 AT1G01420 30.233 473 281 15 2 444 11 464 3.49e-50 177
MS.gene47877.t1 AT3G46650 28.953 449 284 14 2 445 10 428 4.41e-50 176
MS.gene47877.t1 AT4G34138 31.084 489 277 21 1 449 10 478 3.49e-49 175
MS.gene47877.t1 AT4G34131 29.630 486 290 18 1 449 9 479 5.91e-49 174
MS.gene47877.t1 AT3G46700 28.942 463 289 12 2 450 9 445 1.05e-48 172
MS.gene47877.t1 AT5G17040 26.386 451 317 5 2 451 5 441 1.32e-48 172
MS.gene47877.t1 AT3G46680 28.387 465 288 16 2 447 9 447 2.87e-48 172
MS.gene47877.t1 AT2G16890 29.019 479 295 13 2 452 9 470 4.65e-48 172
MS.gene47877.t1 AT3G46690 28.112 466 288 14 2 447 9 447 1.28e-47 170
MS.gene47877.t1 AT5G05860 28.033 478 277 14 1 449 8 447 1.46e-47 170
MS.gene47877.t1 AT2G26480 27.802 464 293 13 2 449 8 445 2.01e-47 169
MS.gene47877.t1 AT3G11340 27.133 457 295 13 3 446 10 441 2.70e-47 169
MS.gene47877.t1 AT1G30530 27.912 455 292 11 8 449 19 450 3.45e-46 166
MS.gene47877.t1 AT4G01070 26.471 476 294 12 2 443 8 461 7.75e-46 166
MS.gene47877.t1 AT2G36750 28.776 490 293 19 1 449 9 483 7.39e-45 163
MS.gene47877.t1 AT1G22370 34.983 303 174 9 159 449 14 305 1.05e-44 158
MS.gene47877.t1 AT5G05900 28.875 471 279 16 1 447 7 445 1.90e-44 161
MS.gene47877.t1 AT2G36770 28.138 494 292 17 1 449 13 488 5.50e-44 161
MS.gene47877.t1 AT2G36800 28.834 489 296 18 1 449 11 487 1.07e-43 160
MS.gene47877.t1 AT5G17030 25.216 464 311 11 2 449 12 455 1.89e-43 159
MS.gene47877.t1 AT3G16520 31.339 351 214 11 103 438 113 451 2.21e-43 159
MS.gene47877.t1 AT3G16520 31.871 342 206 11 103 429 113 442 2.54e-43 158
MS.gene47877.t1 AT3G16520 31.871 342 206 11 103 429 113 442 2.99e-43 158
MS.gene47877.t1 AT3G46720 28.571 469 279 14 2 450 9 441 5.19e-43 157
MS.gene47877.t1 AT4G34135 27.743 483 304 13 1 449 10 481 2.17e-42 156
MS.gene47877.t1 AT3G50740 29.218 486 285 16 2 448 7 472 2.69e-42 156
MS.gene47877.t1 AT1G01390 28.390 472 292 14 2 444 8 462 5.80e-42 155
MS.gene47877.t1 AT1G01390 28.390 472 292 14 2 444 25 479 8.33e-42 155
MS.gene47877.t1 AT5G26310 27.950 483 295 19 2 451 7 469 1.05e-41 154
MS.gene47877.t1 AT3G22250 27.376 442 279 12 3 418 9 434 1.16e-41 154
MS.gene47877.t1 AT2G36760 26.569 478 306 12 1 442 13 481 2.34e-41 154
MS.gene47877.t1 AT2G36790 29.774 487 293 18 1 449 12 487 3.74e-41 153
MS.gene47877.t1 AT5G17040 30.479 292 189 4 161 451 61 339 4.72e-41 149
MS.gene47877.t1 AT5G05890 27.368 475 286 13 1 447 7 450 8.33e-41 151
MS.gene47877.t1 AT3G55700 28.051 467 293 13 2 449 8 450 8.70e-41 152
MS.gene47877.t1 AT2G29740 29.303 488 284 19 2 449 8 474 1.14e-40 151
MS.gene47877.t1 AT5G66690 28.482 481 295 16 2 451 7 469 1.33e-40 151
MS.gene47877.t1 AT3G21790 27.416 507 285 18 1 452 3 481 2.16e-40 151
MS.gene47877.t1 AT3G55710 29.747 474 280 21 2 449 8 454 3.04e-40 150
MS.gene47877.t1 AT2G16890 28.868 433 264 12 2 407 9 424 5.57e-40 149
MS.gene47877.t1 AT5G03490 27.941 476 287 19 2 451 19 464 7.82e-40 149
MS.gene47877.t1 AT3G53160 28.803 493 290 21 1 449 7 482 1.05e-39 149
MS.gene47877.t1 AT1G73880 25.265 471 311 15 2 449 14 466 1.14e-39 149
MS.gene47877.t1 AT2G36780 27.767 497 290 18 1 449 13 488 1.17e-39 149
MS.gene47877.t1 AT3G53150 27.219 507 293 17 1 449 21 509 1.53e-38 146
MS.gene47877.t1 AT3G21800 26.978 493 295 14 3 451 6 477 6.91e-38 144
MS.gene47877.t1 AT1G07250 28.454 485 292 17 2 449 6 472 1.52e-37 143
MS.gene47877.t1 AT3G21750 25.971 489 299 13 1 449 3 468 2.12e-37 142
MS.gene47877.t1 AT4G15280 27.000 500 285 20 1 449 3 473 2.86e-37 142
MS.gene47877.t1 AT4G15280 27.000 500 285 20 1 449 35 505 4.40e-37 142
MS.gene47877.t1 AT4G36770 26.415 477 275 13 1 433 3 447 4.96e-37 141
MS.gene47877.t1 AT1G07260 28.099 484 294 17 2 449 6 471 8.34e-37 141
MS.gene47877.t1 AT3G21760 26.400 500 301 15 1 452 3 483 3.84e-36 139
MS.gene47877.t1 AT2G29730 26.105 475 309 14 1 449 4 462 2.81e-35 136
MS.gene47877.t1 AT4G15260 34.155 284 149 10 190 449 85 354 4.60e-34 131
MS.gene47877.t1 AT3G21780 26.804 485 300 19 1 449 3 468 5.37e-34 133
MS.gene47877.t1 AT4G27570 26.509 464 300 16 2 450 7 444 5.29e-33 130
MS.gene47877.t1 AT2G18570 26.946 501 272 20 2 448 5 465 8.26e-33 130
MS.gene47877.t1 AT2G29710 27.615 478 296 18 2 449 5 462 1.60e-32 129
MS.gene47877.t1 AT4G27560 25.957 470 297 16 1 450 6 444 2.38e-32 128
MS.gene47877.t1 AT2G18560 30.961 281 153 9 193 448 111 375 2.47e-32 127
MS.gene47877.t1 AT1G06000 26.483 472 275 18 2 449 10 433 7.24e-32 126
MS.gene47877.t1 AT5G49690 26.809 470 296 18 1 451 9 449 4.90e-31 124
MS.gene47877.t1 AT3G29630 24.516 465 308 18 1 450 5 441 1.93e-30 122
MS.gene47877.t1 AT1G51210 27.438 441 272 20 2 423 20 431 5.47e-30 121
MS.gene47877.t1 AT1G07240 29.195 298 179 8 171 449 191 475 8.77e-30 121
MS.gene47877.t1 AT2G29750 27.000 500 279 22 2 449 8 473 1.68e-29 120
MS.gene47877.t1 AT5G54010 26.582 474 292 21 1 451 5 445 4.56e-29 119
MS.gene47877.t1 AT2G23210 30.769 273 167 9 2 266 10 268 1.73e-28 114
MS.gene47877.t1 AT5G12890 24.898 490 308 16 1 448 9 480 2.33e-28 117
MS.gene47877.t1 AT5G65550 24.561 456 280 18 1 421 8 434 7.07e-28 115
MS.gene47877.t1 AT3G29630 25.813 461 281 19 1 450 5 415 1.45e-27 114
MS.gene47877.t1 AT2G22590 26.477 457 276 18 1 423 14 444 1.52e-27 115
MS.gene47877.t1 AT5G53990 24.678 466 303 15 1 450 5 438 1.90e-27 114
MS.gene47877.t1 AT5G37950 28.532 361 230 10 17 365 1 345 3.43e-27 112
MS.gene47877.t1 AT5G37950 28.412 359 227 10 17 365 1 339 4.10e-27 111
MS.gene47877.t1 AT1G50580 23.965 459 306 15 1 443 5 436 4.11e-27 113
MS.gene47877.t1 AT1G64910 23.983 467 314 17 1 451 5 446 1.32e-26 112
MS.gene47877.t1 AT2G22930 22.511 462 320 13 1 451 5 439 4.67e-26 110
MS.gene47877.t1 AT5G54060 24.736 473 310 19 1 449 12 462 2.24e-25 108
MS.gene47877.t1 AT1G64920 23.820 466 309 17 1 447 5 443 1.01e-24 106
MS.gene47877.t1 AT4G09500 22.414 464 320 14 1 452 5 440 8.79e-23 100
MS.gene47877.t1 AT4G01070 26.646 319 193 10 2 301 8 304 1.89e-20 92.8
MS.gene47877.t1 AT4G09500 22.343 461 299 15 1 452 5 415 4.85e-19 89.4
MS.gene47877.t1 AT4G34135 25.153 326 209 9 1 301 10 325 8.02e-19 87.8

Find 101 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAATGATATCTGCTTTA+TGG 0.101976 4.4:+12525484 None:intergenic
AATGAGTTCCTTCAAATTCT+TGG 0.176613 4.4:+12525809 None:intergenic
GAAATAGCATTAGGATTATT+AGG 0.226331 4.4:-12524521 MS.gene47877:CDS
CTTATGGGTAATCCCTAATA+TGG 0.251252 4.4:-12524483 MS.gene47877:CDS
GAAGTGGTTCAAATTTCTTA+TGG 0.275041 4.4:-12524499 MS.gene47877:CDS
GTTGGCCCAATTGTCAATAT+TGG 0.291942 4.4:+12524713 None:intergenic
TACTCCCTTGTCCAAGTAAA+AGG 0.292888 4.4:+12524682 None:intergenic
CAATAGGTGATGAGTCTAAT+TGG 0.307848 4.4:+12524627 None:intergenic
TCCTAGTAAGTCAAATTCTT+TGG 0.311601 4.4:+12525710 None:intergenic
GGAAGCCCTGGCATAGAAAT+TGG 0.312817 4.4:+12525600 None:intergenic
ACACTTGAAGCATTGTGTTT+AGG 0.320691 4.4:-12524320 MS.gene47877:CDS
AAATCATTGTCTTTGTCATT+TGG 0.332954 4.4:+12524659 None:intergenic
TCAGCTATTTATGTATCATT+TGG 0.358377 4.4:-12524578 MS.gene47877:CDS
TGATTGGAGATGCATGGTTT+TGG 0.361111 4.4:+12525947 None:intergenic
CTTCAAATTCTTGGAGCCTA+TGG 0.363594 4.4:+12525818 None:intergenic
AAGTGGTTCAAATTTCTTAT+GGG 0.377984 4.4:-12524498 MS.gene47877:CDS
TCATATACTACACAATCTAT+AGG 0.379795 4.4:+12525762 None:intergenic
AAGAGATTGAGAGTTGCATT+AGG 0.380560 4.4:-12524178 MS.gene47877:CDS
GTTCTATCTAACAAAGCTAT+TGG 0.386677 4.4:-12524374 MS.gene47877:CDS
GAAATTGGCATTGAAGATAT+AGG 0.387888 4.4:+12525615 None:intergenic
GAAATGAGTTCAAGTGGAAA+AGG 0.388516 4.4:-12524428 MS.gene47877:CDS
GAAAAGGGTTGGTAGTGAAT+TGG 0.401038 4.4:-12524412 MS.gene47877:CDS
TTTGAATTCAGCCAATCAAT+AGG 0.404156 4.4:+12524611 None:intergenic
TCCAAAACCCATTGAAGAAA+AGG 0.404165 4.4:+12525738 None:intergenic
CTATGTCCAATATTGACAAT+TGG 0.407942 4.4:-12524719 MS.gene47877:CDS
TGAAAATTAATGCTAAGAAA+TGG 0.408124 4.4:-12524124 MS.gene47877:CDS
TAGACTCATCACCTATTGAT+TGG 0.418457 4.4:-12524622 MS.gene47877:CDS
TGCTAAGAAATGGAGAGAAT+TGG 0.423410 4.4:-12524114 MS.gene47877:CDS
AGAGTTAAGGTAAATGAGAA+TGG 0.425016 4.4:-12524215 MS.gene47877:CDS
ACATAAATAGCTGACCCTTC+AGG 0.426164 4.4:+12524587 None:intergenic
CAAATGAAGGAAATAGCATT+AGG 0.428452 4.4:-12524530 MS.gene47877:CDS
CATATACTACACAATCTATA+GGG 0.430640 4.4:+12525763 None:intergenic
AGCAAACGTTTGAGCACAAA+AGG 0.432736 4.4:-12526005 MS.gene47877:CDS
TATGTCCAATATTGACAATT+GGG 0.442133 4.4:-12524718 MS.gene47877:CDS
CCTTCCTTTGTTTATGACCC+TGG 0.449807 4.4:-12525555 MS.gene47877:CDS
CGTTTGCTGAATTGAAGCAT+TGG 0.459472 4.4:+12526020 None:intergenic
CAATTTGACTTCATATCTGA+TGG 0.466660 4.4:-12525903 MS.gene47877:CDS
GTTTGCTGAATTGAAGCATT+GGG 0.469700 4.4:+12526021 None:intergenic
TTGAAGGTAAGGATGATGAT+TGG 0.473871 4.4:+12525931 None:intergenic
AAGTCAAATTGAAGGGTTGA+AGG 0.475531 4.4:+12525915 None:intergenic
ATGTGACCTTGACTTGGGTA+TGG 0.475859 4.4:+12526047 None:intergenic
TTATGTATCATTTGGAAGCA+TGG 0.479963 4.4:-12524570 MS.gene47877:CDS
GGGTTTATGTGACCTTGACT+TGG 0.481353 4.4:+12526041 None:intergenic
TCAATGCCAATTTCTATGCC+AGG 0.483097 4.4:-12525606 MS.gene47877:CDS
CAGATATGAAGTCAAATTGA+AGG 0.488866 4.4:+12525907 None:intergenic
AAATTGAAGGGTTGAAGGTA+AGG 0.491787 4.4:+12525920 None:intergenic
ATTGAAGAAATGAGTTCAAG+TGG 0.492000 4.4:-12524434 MS.gene47877:CDS
CTGGTCTTCTAGCTTGTAGA+AGG 0.493156 4.4:+12525455 None:intergenic
CTTCTACAAGCTAGAAGACC+AGG 0.493515 4.4:-12525454 MS.gene47877:intron
GGTTGCTTTCTAACACATAG+TGG 0.494765 4.4:-12524353 MS.gene47877:CDS
GCATTAGGATTATTAGGAAG+TGG 0.500366 4.4:-12524515 MS.gene47877:CDS
CATAGGCTCCAAGAATTTGA+AGG 0.504127 4.4:-12525817 MS.gene47877:CDS
GTTGAGGATGTGTGGAAAGT+GGG 0.506952 4.4:-12524242 MS.gene47877:CDS
GAAAGTGGGAATGAGAGTTA+AGG 0.512272 4.4:-12524228 MS.gene47877:CDS
TAGTAAGCAGGATAGAAGCC+AGG 0.514306 4.4:+12525537 None:intergenic
GCCAAAGAATTTGACTTACT+AGG 0.518520 4.4:-12525711 MS.gene47877:CDS
CTATCCTGCTTACTATGAGA+TGG 0.519933 4.4:-12525529 MS.gene47877:CDS
TGTTGAGGATGTGTGGAAAG+TGG 0.525190 4.4:-12524243 MS.gene47877:CDS
CCAAAACCCATTGAAGAAAA+GGG 0.527692 4.4:+12525739 None:intergenic
AAATGAGTTCAAGTGGAAAA+GGG 0.528479 4.4:-12524427 MS.gene47877:CDS
AAAGTGATGGAAAATGACAT+TGG 0.536596 4.4:-12524155 MS.gene47877:CDS
ATTGTGTTTAGGAGTGCCTA+TGG 0.537967 4.4:-12524309 MS.gene47877:CDS
GAGTTAAGGTAAATGAGAAT+GGG 0.543847 4.4:-12524214 MS.gene47877:CDS
AGATCAAGCAAAGGAAGCCC+TGG 0.546518 4.4:+12525588 None:intergenic
CCAGGGTCATAAACAAAGGA+AGG 0.547762 4.4:+12525555 None:intergenic
ATGTATTATTATGTTTACCA+TGG 0.551919 4.4:-12525651 MS.gene47877:CDS
GGTTTATGTGACCTTGACTT+GGG 0.551938 4.4:+12526042 None:intergenic
ATATCTGATGGCTATGATGA+AGG 0.556777 4.4:-12525891 MS.gene47877:CDS
CCCTTGTCCAAGTAAAAGGA+TGG 0.556992 4.4:+12524686 None:intergenic
CAATGCCAATTTCTATGCCA+GGG 0.557141 4.4:-12525605 MS.gene47877:CDS
CTATCTCACATGAAAACCAT+AGG 0.561539 4.4:-12525834 MS.gene47877:CDS
GCTTTCTAACACATAGTGGA+TGG 0.561712 4.4:-12524349 MS.gene47877:CDS
CAAAATATGTTGAGGATGTG+TGG 0.562683 4.4:-12524250 MS.gene47877:CDS
TAGGAAGCTTTAAAAGTCCA+TGG 0.564480 4.4:+12525634 None:intergenic
ATAACCATCTCATAGTAAGC+AGG 0.564645 4.4:+12525525 None:intergenic
CTTTAGCATAGAGCAAATGA+AGG 0.565909 4.4:-12524543 MS.gene47877:CDS
AATTTGTAAATGAGCTGAAG+AGG 0.570594 4.4:-12524043 MS.gene47877:CDS
AAGTAAAAGGATGGAACTGT+TGG 0.582183 4.4:+12524695 None:intergenic
CAGGGTCATAAACAAAGGAA+GGG 0.583374 4.4:+12525556 None:intergenic
AGTAAGCAGGATAGAAGCCA+GGG 0.586536 4.4:+12525538 None:intergenic
ATGGTTCCATACCCAAGTCA+AGG 0.598862 4.4:-12526053 MS.gene47877:CDS
TGGCTGAATTCAAAGCCTGA+AGG 0.601191 4.4:-12524602 MS.gene47877:CDS
CACTGTGGTATTGCAACCAT+AGG 0.601959 4.4:+12524293 None:intergenic
AGTGAATTGGATACCACAGT+TGG 0.602235 4.4:-12524399 MS.gene47877:CDS
GAAGGTGGCTTTGCTCAAGT+TGG 0.608792 4.4:-12525873 MS.gene47877:CDS
AGATATGAAGTCAAATTGAA+GGG 0.612280 4.4:+12525908 None:intergenic
GGATGATGATTGGAGATGCA+TGG 0.615276 4.4:+12525941 None:intergenic
AGGGTCATAAACAAAGGAAG+GGG 0.619189 4.4:+12525557 None:intergenic
GCTATAGAAGCAGTAAGTCA+TGG 0.620556 4.4:-12524092 MS.gene47877:CDS
GAGTTCAAGTGGAAAAGGGT+TGG 0.622029 4.4:-12524423 MS.gene47877:CDS
GGCTGAATTCAAAGCCTGAA+GGG 0.623236 4.4:-12524601 MS.gene47877:CDS
TTAGATAGAACTTCCAACTG+TGG 0.627701 4.4:+12524386 None:intergenic
GAAGCCAGGGTCATAAACAA+AGG 0.633076 4.4:+12525551 None:intergenic
GAGTTGCATTAGGAAAGTGA+TGG 0.636211 4.4:-12524168 MS.gene47877:CDS
TTTGAATGCAAAATATGTTG+AGG 0.643170 4.4:-12524258 MS.gene47877:CDS
TCTGATGGCTATGATGAAGG+TGG 0.677720 4.4:-12525888 MS.gene47877:CDS
AAAAGGAGTTAACGTCACAA+TGG 0.689260 4.4:-12525988 MS.gene47877:CDS
GTATCTTTGAGATCAAGCAA+AGG 0.699284 4.4:+12525579 None:intergenic
ATAGAAGCAGTAAGTCATGG+TGG 0.738041 4.4:-12524089 MS.gene47877:CDS
AAAGGTTGATCAGTCCACTG+TGG 0.777400 4.4:+12524278 None:intergenic
CTATGGTTGCAATACCACAG+TGG 0.814711 4.4:-12524292 MS.gene47877:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAACAATAAATAGA+GGG - chr4.4:12524826-12524845 MS.gene47877:intron 10.0%
!! CTAAATTTAAATTTATTTCA+TGG - chr4.4:12524974-12524993 MS.gene47877:intron 10.0%
!! TAAAAATAAACAATAAATAG+AGG - chr4.4:12524825-12524844 MS.gene47877:intron 10.0%
!! AAATAACTTCAAACATAATA+AGG + chr4.4:12524703-12524722 None:intergenic 15.0%
!! AATTAAGAGTAATTAATACA+GGG + chr4.4:12525003-12525022 None:intergenic 15.0%
!!! ATAAAAGTGTCAAATATTTT+TGG + chr4.4:12525119-12525138 None:intergenic 15.0%
!!! TATTGATATAAACTGAATTT+TGG - chr4.4:12525281-12525300 MS.gene47877:intron 15.0%
!! ACATAATAAGGAATATAAAG+AGG + chr4.4:12524691-12524710 None:intergenic 20.0%
!! ACCACATTAATTAAAATATG+AGG + chr4.4:12525234-12525253 None:intergenic 20.0%
!! AGAGATCATATACATATAAA+TGG + chr4.4:12525164-12525183 None:intergenic 20.0%
!! ATGTATTATTATGTTTACCA+TGG - chr4.4:12524451-12524470 MS.gene47877:CDS 20.0%
!! ATTAAAAGAAAGTAAGTTAG+TGG + chr4.4:12525026-12525045 None:intergenic 20.0%
!! GAATTAAGAGTAATTAATAC+AGG + chr4.4:12525004-12525023 None:intergenic 20.0%
!! TGAAAATTAATGCTAAGAAA+TGG - chr4.4:12525978-12525997 MS.gene47877:CDS 20.0%
!! TTCCATATGAATGATATATA+AGG - chr4.4:12525340-12525359 MS.gene47877:intron 20.0%
!!! ACCTCATATTTTAATTAATG+TGG - chr4.4:12525230-12525249 MS.gene47877:intron 20.0%
!!! ATATTCTTTTTCTCCATATT+AGG + chr4.4:12525635-12525654 None:intergenic 20.0%
!!! TATTCTTTTTCTCCATATTA+GGG + chr4.4:12525634-12525653 None:intergenic 20.0%
!!! TTTGTTTCTTACGAAAAAAT+CGG + chr4.4:12524897-12524916 None:intergenic 20.0%
! AAATCATTGTCTTTGTCATT+TGG + chr4.4:12525446-12525465 None:intergenic 25.0%
! AAGTGGTTCAAATTTCTTAT+GGG - chr4.4:12525604-12525623 MS.gene47877:CDS 25.0%
! AATAAACAATAAATAGAGGG+TGG - chr4.4:12524829-12524848 MS.gene47877:intron 25.0%
! AGATATGAAGTCAAATTGAA+GGG + chr4.4:12524197-12524216 None:intergenic 25.0%
! CACCTTATATATCATTCATA+TGG + chr4.4:12525345-12525364 None:intergenic 25.0%
! CATATACATATAAATGGTCA+CGG + chr4.4:12525158-12525177 None:intergenic 25.0%
! CATATACTACACAATCTATA+GGG + chr4.4:12524342-12524361 None:intergenic 25.0%
! CATATGAATGATATATAAGG+TGG - chr4.4:12525343-12525362 MS.gene47877:intron 25.0%
! GAAATAGCATTAGGATTATT+AGG - chr4.4:12525581-12525600 MS.gene47877:CDS 25.0%
! TAATAAGGAATATAAAGAGG+AGG + chr4.4:12524688-12524707 None:intergenic 25.0%
! TATGTCCAATATTGACAATT+GGG - chr4.4:12525384-12525403 MS.gene47877:intron 25.0%
! TCAGCTATTTATGTATCATT+TGG - chr4.4:12525524-12525543 MS.gene47877:CDS 25.0%
! TCATATACTACACAATCTAT+AGG + chr4.4:12524343-12524362 None:intergenic 25.0%
! TTTGAATGCAAAATATGTTG+AGG - chr4.4:12525844-12525863 MS.gene47877:CDS 25.0%
!! TCAACATATTTTGCATTCAA+AGG + chr4.4:12525845-12525864 None:intergenic 25.0%
!!! GGTCATTTTTATAAGAAACA+TGG + chr4.4:12525098-12525117 None:intergenic 25.0%
!!! GTGAAAGCAATTTTAATAAG+TGG + chr4.4:12524778-12524797 None:intergenic 25.0%
AAATGAGTTCAAGTGGAAAA+GGG - chr4.4:12525675-12525694 MS.gene47877:CDS 30.0%
AATGAGTTCCTTCAAATTCT+TGG + chr4.4:12524296-12524315 None:intergenic 30.0%
AATTTGTAAATGAGCTGAAG+AGG - chr4.4:12526059-12526078 MS.gene47877:CDS 30.0%
AGAGTTAAGGTAAATGAGAA+TGG - chr4.4:12525887-12525906 MS.gene47877:CDS 30.0%
ATGAATGATATATAAGGTGG+TGG - chr4.4:12525346-12525365 MS.gene47877:intron 30.0%
ATTGAAGAAATGAGTTCAAG+TGG - chr4.4:12525668-12525687 MS.gene47877:CDS 30.0%
CAAATGAAGGAAATAGCATT+AGG - chr4.4:12525572-12525591 MS.gene47877:CDS 30.0%
CAAGAATGATATCTGCTTTA+TGG + chr4.4:12524621-12524640 None:intergenic 30.0%
CAGATATGAAGTCAAATTGA+AGG + chr4.4:12524198-12524217 None:intergenic 30.0%
CTATGTCCAATATTGACAAT+TGG - chr4.4:12525383-12525402 MS.gene47877:intron 30.0%
GAAGTGGTTCAAATTTCTTA+TGG - chr4.4:12525603-12525622 MS.gene47877:CDS 30.0%
GAGTTAAGGTAAATGAGAAT+GGG - chr4.4:12525888-12525907 MS.gene47877:CDS 30.0%
GTTCTATCTAACAAAGCTAT+TGG - chr4.4:12525728-12525747 MS.gene47877:CDS 30.0%
TACATGATTCTGTTATGTGA+TGG + chr4.4:12525200-12525219 None:intergenic 30.0%
TCCTAGTAAGTCAAATTCTT+TGG + chr4.4:12524395-12524414 None:intergenic 30.0%
TTATGTATCATTTGGAAGCA+TGG - chr4.4:12525532-12525551 MS.gene47877:CDS 30.0%
TTTGAATTCAGCCAATCAAT+AGG + chr4.4:12525494-12525513 None:intergenic 30.0%
! AAAGTGATGGAAAATGACAT+TGG - chr4.4:12525947-12525966 MS.gene47877:CDS 30.0%
! ATATGACCCTTTTCTTCAAT+GGG - chr4.4:12524357-12524376 MS.gene47877:CDS 30.0%
! CAATTTGACTTCATATCTGA+TGG - chr4.4:12524199-12524218 MS.gene47877:CDS 30.0%
! GAAATTGGCATTGAAGATAT+AGG + chr4.4:12524490-12524509 None:intergenic 30.0%
! TATATGACCCTTTTCTTCAA+TGG - chr4.4:12524356-12524375 MS.gene47877:CDS 30.0%
! TTGTTTTCAATGTGTGTCAA+TGG + chr4.4:12524938-12524957 None:intergenic 30.0%
!! ACTGAATTTTGGTAGAGATT+TGG - chr4.4:12525292-12525311 MS.gene47877:intron 30.0%
AAAAGGAGTTAACGTCACAA+TGG - chr4.4:12524114-12524133 MS.gene47877:CDS 35.0%
AAATTGAAGGGTTGAAGGTA+AGG + chr4.4:12524185-12524204 None:intergenic 35.0%
AAGAGATTGAGAGTTGCATT+AGG - chr4.4:12525924-12525943 MS.gene47877:CDS 35.0%
AAGTAAAAGGATGGAACTGT+TGG + chr4.4:12525410-12525429 None:intergenic 35.0%
AAGTCAAATTGAAGGGTTGA+AGG + chr4.4:12524190-12524209 None:intergenic 35.0%
ACTAATCTTCCATAGGTCTA+TGG + chr4.4:12524737-12524756 None:intergenic 35.0%
ATAACCATCTCATAGTAAGC+AGG + chr4.4:12524580-12524599 None:intergenic 35.0%
ATAGACCTATGGAAGATTAG+TGG - chr4.4:12524736-12524755 MS.gene47877:CDS 35.0%
ATATCTGATGGCTATGATGA+AGG - chr4.4:12524211-12524230 MS.gene47877:CDS 35.0%
CAAAATATGTTGAGGATGTG+TGG - chr4.4:12525852-12525871 MS.gene47877:CDS 35.0%
CAATAGGTGATGAGTCTAAT+TGG + chr4.4:12525478-12525497 None:intergenic 35.0%
CCAAAACCCATTGAAGAAAA+GGG + chr4.4:12524366-12524385 None:intergenic 35.0%
CTATCTCACATGAAAACCAT+AGG - chr4.4:12524268-12524287 MS.gene47877:CDS 35.0%
CTTATGGGTAATCCCTAATA+TGG - chr4.4:12525619-12525638 MS.gene47877:CDS 35.0%
CTTTAGCATAGAGCAAATGA+AGG - chr4.4:12525559-12525578 MS.gene47877:CDS 35.0%
GAAATGAGTTCAAGTGGAAA+AGG - chr4.4:12525674-12525693 MS.gene47877:CDS 35.0%
GCATTAGGATTATTAGGAAG+TGG - chr4.4:12525587-12525606 MS.gene47877:CDS 35.0%
GTTTCTTACGAAAAAATCGG+AGG + chr4.4:12524894-12524913 None:intergenic 35.0%
TAAGGAATATAAAGAGGAGG+AGG + chr4.4:12524685-12524704 None:intergenic 35.0%
TAGACCTATGGAAGATTAGT+GGG - chr4.4:12524737-12524756 MS.gene47877:CDS 35.0%
TAGACTCATCACCTATTGAT+TGG - chr4.4:12525480-12525499 MS.gene47877:CDS 35.0%
TCATCAATTCCATAGACCTA+TGG - chr4.4:12524725-12524744 MS.gene47877:CDS 35.0%
TCCAAAACCCATTGAAGAAA+AGG + chr4.4:12524367-12524386 None:intergenic 35.0%
TGCTAAGAAATGGAGAGAAT+TGG - chr4.4:12525988-12526007 MS.gene47877:CDS 35.0%
TTAGATAGAACTTCCAACTG+TGG + chr4.4:12525719-12525738 None:intergenic 35.0%
TTGAAGGTAAGGATGATGAT+TGG + chr4.4:12524174-12524193 None:intergenic 35.0%
! AACAGTTCCATCCTTTTACT+TGG - chr4.4:12525409-12525428 MS.gene47877:intron 35.0%
! GCCAAAGAATTTGACTTACT+AGG - chr4.4:12524391-12524410 MS.gene47877:CDS 35.0%
! GGTTTTCATGTGAGATAGAT+AGG + chr4.4:12524266-12524285 None:intergenic 35.0%
! GTTTGCTGAATTGAAGCATT+GGG + chr4.4:12524084-12524103 None:intergenic 35.0%
!! ACACTTGAAGCATTGTGTTT+AGG - chr4.4:12525782-12525801 MS.gene47877:CDS 35.0%
!! GTATCTTTGAGATCAAGCAA+AGG + chr4.4:12524526-12524545 None:intergenic 35.0%
!! TAGGAAGCTTTAAAAGTCCA+TGG + chr4.4:12524471-12524490 None:intergenic 35.0%
!!! CATGGTTTTGGAGATGAAAA+TGG + chr4.4:12524146-12524165 None:intergenic 35.0%
ACATAAATAGCTGACCCTTC+AGG + chr4.4:12525518-12525537 None:intergenic 40.0%
AGCAAACGTTTGAGCACAAA+AGG - chr4.4:12524097-12524116 MS.gene47877:CDS 40.0%
AGGGTCATAAACAAAGGAAG+GGG + chr4.4:12524548-12524567 None:intergenic 40.0%
AGTGAATTGGATACCACAGT+TGG - chr4.4:12525703-12525722 MS.gene47877:CDS 40.0%
ATAGAAGCAGTAAGTCATGG+TGG - chr4.4:12526013-12526032 MS.gene47877:CDS 40.0%
CAATGCCAATTTCTATGCCA+GGG - chr4.4:12524497-12524516 MS.gene47877:CDS 40.0%
CAGGGTCATAAACAAAGGAA+GGG + chr4.4:12524549-12524568 None:intergenic 40.0%
CATAGGCTCCAAGAATTTGA+AGG - chr4.4:12524285-12524304 MS.gene47877:CDS 40.0%
CTATCCTGCTTACTATGAGA+TGG - chr4.4:12524573-12524592 MS.gene47877:CDS 40.0%
CTTCAAATTCTTGGAGCCTA+TGG + chr4.4:12524287-12524306 None:intergenic 40.0%
GAAAGTGGGAATGAGAGTTA+AGG - chr4.4:12525874-12525893 MS.gene47877:CDS 40.0%
GAGTTGCATTAGGAAAGTGA+TGG - chr4.4:12525934-12525953 MS.gene47877:CDS 40.0%
GCTATAGAAGCAGTAAGTCA+TGG - chr4.4:12526010-12526029 MS.gene47877:CDS 40.0%
GGTTTATGTGACCTTGACTT+GGG + chr4.4:12524063-12524082 None:intergenic 40.0%
GTTGGCCCAATTGTCAATAT+TGG + chr4.4:12525392-12525411 None:intergenic 40.0%
TACTCCCTTGTCCAAGTAAA+AGG + chr4.4:12525423-12525442 None:intergenic 40.0%
TCAATGCCAATTTCTATGCC+AGG - chr4.4:12524496-12524515 MS.gene47877:CDS 40.0%
! CCATCCTTTTACTTGGACAA+GGG - chr4.4:12525416-12525435 MS.gene47877:intron 40.0%
! CGTTTGCTGAATTGAAGCAT+TGG + chr4.4:12524085-12524104 None:intergenic 40.0%
! GCTTTCTAACACATAGTGGA+TGG - chr4.4:12525753-12525772 MS.gene47877:CDS 40.0%
! GGTTGCTTTCTAACACATAG+TGG - chr4.4:12525749-12525768 MS.gene47877:CDS 40.0%
! TCCATCCTTTTACTTGGACA+AGG - chr4.4:12525415-12525434 MS.gene47877:intron 40.0%
! TGATTGGAGATGCATGGTTT+TGG + chr4.4:12524158-12524177 None:intergenic 40.0%
!! ATTGTGTTTAGGAGTGCCTA+TGG - chr4.4:12525793-12525812 MS.gene47877:CDS 40.0%
!! CCCTTTTCTTCAATGGGTTT+TGG - chr4.4:12524363-12524382 MS.gene47877:CDS 40.0%
!! GAAAAGGGTTGGTAGTGAAT+TGG - chr4.4:12525690-12525709 MS.gene47877:CDS 40.0%
AGTAAGCAGGATAGAAGCCA+GGG + chr4.4:12524567-12524586 None:intergenic 45.0%
ATGGTTCCATACCCAAGTCA+AGG - chr4.4:12524049-12524068 MS.gene47877:CDS 45.0%
CACTGTGGTATTGCAACCAT+AGG + chr4.4:12525812-12525831 None:intergenic 45.0%
CCAGGGTCATAAACAAAGGA+AGG + chr4.4:12524550-12524569 None:intergenic 45.0%
CCCTTGTCCAAGTAAAAGGA+TGG + chr4.4:12525419-12525438 None:intergenic 45.0%
CTATGGTTGCAATACCACAG+TGG - chr4.4:12525810-12525829 MS.gene47877:CDS 45.0%
CTTCTACAAGCTAGAAGACC+AGG - chr4.4:12524648-12524667 MS.gene47877:CDS 45.0%
GAAGCCAGGGTCATAAACAA+AGG + chr4.4:12524554-12524573 None:intergenic 45.0%
GAGGAGGTGAGTAAAAAACC+TGG + chr4.4:12524669-12524688 None:intergenic 45.0%
GAGTTCAAGTGGAAAAGGGT+TGG - chr4.4:12525679-12525698 MS.gene47877:CDS 45.0%
GGATGATGATTGGAGATGCA+TGG + chr4.4:12524164-12524183 None:intergenic 45.0%
GGCTGAATTCAAAGCCTGAA+GGG - chr4.4:12525501-12525520 MS.gene47877:CDS 45.0%
GGGTTTATGTGACCTTGACT+TGG + chr4.4:12524064-12524083 None:intergenic 45.0%
GTGTCCCACTAATCTTCCAT+AGG + chr4.4:12524744-12524763 None:intergenic 45.0%
GTTGAGGATGTGTGGAAAGT+GGG - chr4.4:12525860-12525879 MS.gene47877:CDS 45.0%
TAGTAAGCAGGATAGAAGCC+AGG + chr4.4:12524568-12524587 None:intergenic 45.0%
TCTGATGGCTATGATGAAGG+TGG - chr4.4:12524214-12524233 MS.gene47877:CDS 45.0%
TGGCTGAATTCAAAGCCTGA+AGG - chr4.4:12525500-12525519 MS.gene47877:CDS 45.0%
TGTTGAGGATGTGTGGAAAG+TGG - chr4.4:12525859-12525878 MS.gene47877:CDS 45.0%
! AAAGGTTGATCAGTCCACTG+TGG + chr4.4:12525827-12525846 None:intergenic 45.0%
! CCTTCCTTTGTTTATGACCC+TGG - chr4.4:12524547-12524566 MS.gene47877:CDS 45.0%
!! ATGTGACCTTGACTTGGGTA+TGG + chr4.4:12524058-12524077 None:intergenic 45.0%
!! CTGGTCTTCTAGCTTGTAGA+AGG + chr4.4:12524650-12524669 None:intergenic 45.0%
AGATCAAGCAAAGGAAGCCC+TGG + chr4.4:12524517-12524536 None:intergenic 50.0%
GGAAGCCCTGGCATAGAAAT+TGG + chr4.4:12524505-12524524 None:intergenic 50.0%
! GAAGGTGGCTTTGCTCAAGT+TGG - chr4.4:12524229-12524248 MS.gene47877:CDS 50.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 12524037 12526087 12524037 ID=MS.gene47877
chr4.4 mRNA 12524037 12526087 12524037 ID=MS.gene47877.t1;Parent=MS.gene47877
chr4.4 exon 12525455 12526087 12525455 ID=MS.gene47877.t1.exon1;Parent=MS.gene47877.t1
chr4.4 CDS 12525455 12526087 12525455 ID=cds.MS.gene47877.t1;Parent=MS.gene47877.t1
chr4.4 exon 12524037 12524762 12524037 ID=MS.gene47877.t1.exon2;Parent=MS.gene47877.t1
chr4.4 CDS 12524037 12524762 12524037 ID=cds.MS.gene47877.t1;Parent=MS.gene47877.t1
Gene Sequence

>MS.gene47877

ATGCATGTTTTAATGGTTCCATACCCAAGTCAAGGTCACATAAACCCAATGCTTCAATTCAGCAAACGTTTGAGCACAAAAGGAGTTAACGTCACAATGGTCACAACCATTTTCATCTCCAAAACCATGCATCTCCAATCATCATCCTTACCTTCAACCCTTCAATTTGACTTCATATCTGATGGCTATGATGAAGGTGGCTTTGCTCAAGTTGGCAACATATCAACCTATCTATCTCACATGAAAACCATAGGCTCCAAGAATTTGAAGGAACTCATTCAAAAACATAATGTTTCTGATCACCCTATAGATTGTGTAGTATATGACCCTTTTCTTCAATGGGTTTTGGATGTAGCCAAAGAATTTGACTTACTAGGAGCTGCTTTTTTCACTCAAATGTGTGCTGTCAATTACATGTATTATTATGTTTACCATGGACTTTTAAAGCTTCCTATATCTTCAATGCCAATTTCTATGCCAGGGCTTCCTTTGCTTGATCTCAAAGATACCCCTTCCTTTGTTTATGACCCTGGCTTCTATCCTGCTTACTATGAGATGGTTATGAATCAATATTCTAACATCCATAAAGCAGATATCATTCTTGTCAATTCCTTCTACAAGCTAGAAGACCAGGTTTTTTACTCACCTCCTCCTCTTTATATTCCTTATTATGTTTGAAGTTATTTTATCATCAATTCCATAGACCTATGGAAGATTAGTGGGACACATTAGTGTGATCCACTTATTAAAATTGCTTTCACTAATCTATCACTTATGTCTATCTCTCTTAAAAATAAACAATAAATAGAGGGTGGATAAATGAAGCAAACTTAGACTCATAATATATGATACTTCCTCCGATTTTTTCGTAAGAAACAAAAGACATAAATCATCAAGACCATTGACACACATTGAAAACAATTATTTTCATTTAATACTAAATTTAAATTTATTTCATGGATACCCTGTATTAATTACTCTTAATTCCACTAACTTACTTTCTTTTAATATTCTCTCTCACAAATGAAATTTAGCTTCTAACACATTTAAAAATTTGTCCATGTTTCTTATAAAAATGACCAAAAATATTTGACACTTTTATTTCTTATAAAAAAAAACCGTGACCATTTATATGTATATGATCTCTCATCTTACAATCACCATCACATAACAGAATCATGTATCAGCTATTAACCTCATATTTTAATTAATGTGGTAGAGTAGTAATTGTAACGAAATGTAATTATTGATATAAACTGAATTTTGGTAGAGATTTGGTTGAACAAATTATGATCTCATCATTTTCCATATGAATGATATATAAGGTGGTGGATTCTATGTCAAAGCTATGTCCAATATTGACAATTGGGCCAACAGTTCCATCCTTTTACTTGGACAAGGGAGTACCAAATGACAAAGACAATGATTTGAATCTCTTCCAATTAGACTCATCACCTATTGATTGGCTGAATTCAAAGCCTGAAGGGTCAGCTATTTATGTATCATTTGGAAGCATGGTATGCTTTAGCATAGAGCAAATGAAGGAAATAGCATTAGGATTATTAGGAAGTGGTTCAAATTTCTTATGGGTAATCCCTAATATGGAGAAAAAGAATATCTCAAAAGAGTTGATTGAAGAAATGAGTTCAAGTGGAAAAGGGTTGGTAGTGAATTGGATACCACAGTTGGAAGTTCTATCTAACAAAGCTATTGGTTGCTTTCTAACACATAGTGGATGGAATTCAACACTTGAAGCATTGTGTTTAGGAGTGCCTATGGTTGCAATACCACAGTGGACTGATCAACCTTTGAATGCAAAATATGTTGAGGATGTGTGGAAAGTGGGAATGAGAGTTAAGGTAAATGAGAATGGGATTGTGACAAAAGAAGAGATTGAGAGTTGCATTAGGAAAGTGATGGAAAATGACATTGGAAGAGAAATGAAAATTAATGCTAAGAAATGGAGAGAATTGGCTATAGAAGCAGTAAGTCATGGTGGCACTTCAGATAACAACATCAATGAATTTGTAAATGAGCTGAAGAGGTCCTAA

Protein sequence

>MS.gene47877.t1

MHVLMVPYPSQGHINPMLQFSKRLSTKGVNVTMVTTIFISKTMHLQSSSLPSTLQFDFISDGYDEGGFAQVGNISTYLSHMKTIGSKNLKELIQKHNVSDHPIDCVVYDPFLQWVLDVAKEFDLLGAAFFTQMCAVNYMYYYVYHGLLKLPISSMPISMPGLPLLDLKDTPSFVYDPGFYPAYYEMVMNQYSNIHKADIILVNSFYKLEDQVVDSMSKLCPILTIGPTVPSFYLDKGVPNDKDNDLNLFQLDSSPIDWLNSKPEGSAIYVSFGSMVCFSIEQMKEIALGLLGSGSNFLWVIPNMEKKNISKELIEEMSSSGKGLVVNWIPQLEVLSNKAIGCFLTHSGWNSTLEALCLGVPMVAIPQWTDQPLNAKYVEDVWKVGMRVKVNENGIVTKEEIESCIRKVMENDIGREMKINAKKWRELAIEAVSHGGTSDNNINEFVNELKRS