Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83095.t1 | XP_003589664.1 | 95.6 | 68 | 3 | 0 | 1 | 68 | 76 | 143 | 1.50E-28 | 135.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83095.t1 | G7IA04 | 95.6 | 68 | 3 | 0 | 1 | 68 | 76 | 143 | 1.1e-28 | 135.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene83095 | 0.860151 | 2.52E-63 | -1.69E-46 |
| MS.gene049171 | MS.gene83095 | 0.904174 | 1.62E-79 | -1.69E-46 |
| MS.gene049173 | MS.gene83095 | 0.823089 | 1.67E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene83095 | 0.853052 | 3.08E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene83095 | 0.891105 | 5.38E-74 | -1.69E-46 |
| MS.gene049285 | MS.gene83095 | 0.886533 | 3.15E-72 | -1.69E-46 |
| MS.gene049320 | MS.gene83095 | 0.867077 | 1.79E-65 | -1.69E-46 |
| MS.gene04939 | MS.gene83095 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene83095 | 0.84021 | 9.97E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene83095 | 0.869479 | 3.00E-66 | -1.69E-46 |
| MS.gene049627 | MS.gene83095 | 0.816131 | 6.48E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene83095 | 0.860851 | 1.55E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene83095 | 0.852979 | 3.24E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene83095 | 0.814047 | 1.88E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene83095 | 0.871247 | 7.90E-67 | -1.69E-46 |
| MS.gene050165 | MS.gene83095 | 0.85678 | 2.55E-62 | -1.69E-46 |
| MS.gene050170 | MS.gene83095 | 0.828686 | 7.83E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene83095 | 0.824771 | 6.74E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene83095 | 0.828936 | 6.81E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene83095 | 0.815091 | 1.10E-51 | -1.69E-46 |
| MS.gene050479 | MS.gene83095 | -0.811248 | 7.70E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene83095 | 0.872642 | 2.72E-67 | -1.69E-46 |
| MS.gene050507 | MS.gene83095 | 0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene050518 | MS.gene83095 | 0.858071 | 1.06E-62 | -1.69E-46 |
| MS.gene050538 | MS.gene83095 | 0.876462 | 1.37E-68 | -1.69E-46 |
| MS.gene050547 | MS.gene83095 | -0.816448 | 5.50E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene83095 | 0.888789 | 4.32E-73 | -1.69E-46 |
| MS.gene050593 | MS.gene83095 | 0.836253 | 1.04E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene83095 | 0.869794 | 2.37E-66 | -1.69E-46 |
| MS.gene050675 | MS.gene83095 | 0.831243 | 1.86E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene83095 | 0.882141 | 1.34E-70 | -1.69E-46 |
| MS.gene050747 | MS.gene83095 | 0.889421 | 2.46E-73 | -1.69E-46 |
| MS.gene050772 | MS.gene83095 | 0.864009 | 1.65E-64 | -1.69E-46 |
| MS.gene050781 | MS.gene83095 | 0.829682 | 4.49E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene83095 | 0.865478 | 5.74E-65 | -1.69E-46 |
| MS.gene050812 | MS.gene83095 | 0.807058 | 6.08E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene83095 | 0.867261 | 1.56E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene83095 | 0.852232 | 5.29E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene83095 | 0.848991 | 4.31E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene83095 | 0.817352 | 3.45E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene83095 | 0.891301 | 4.50E-74 | -1.69E-46 |
| MS.gene050986 | MS.gene83095 | 0.832272 | 1.04E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene83095 | 0.839466 | 1.56E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene83095 | 0.80452 | 2.08E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene83095 | 0.855119 | 7.81E-62 | -1.69E-46 |
| MS.gene051387 | MS.gene83095 | 0.826951 | 2.05E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene83095 | 0.825804 | 3.84E-54 | -1.69E-46 |
| MS.gene051617 | MS.gene83095 | 0.801639 | 8.19E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene83095 | 0.869343 | 3.33E-66 | -1.69E-46 |
| MS.gene051694 | MS.gene83095 | 0.858035 | 1.09E-62 | -1.69E-46 |
| MS.gene051734 | MS.gene83095 | 0.817224 | 3.69E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene83095 | 0.838128 | 3.46E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene83095 | 0.870874 | 1.05E-66 | -1.69E-46 |
| MS.gene051858 | MS.gene83095 | 0.846124 | 2.65E-59 | -1.69E-46 |
| MS.gene051949 | MS.gene83095 | 0.801653 | 8.14E-49 | -1.69E-46 |
| MS.gene052015 | MS.gene83095 | -0.801956 | 7.05E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene83095 | 0.852514 | 4.39E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene83095 | 0.806854 | 6.72E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene83095 | 0.842411 | 2.63E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene83095 | 0.804646 | 1.95E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene83095 | 0.820722 | 5.90E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene83095 | 0.846682 | 1.86E-59 | -1.69E-46 |
| MS.gene052484 | MS.gene83095 | 0.818946 | 1.50E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene83095 | 0.850685 | 1.45E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene83095 | 0.855338 | 6.75E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene83095 | 0.869536 | 2.88E-66 | -1.69E-46 |
| MS.gene052505 | MS.gene83095 | 0.850799 | 1.34E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene83095 | 0.817034 | 4.06E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene83095 | -0.807381 | 5.20E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene83095 | 0.882011 | 1.49E-70 | -1.69E-46 |
| MS.gene052822 | MS.gene83095 | 0.814883 | 1.23E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene83095 | 0.869823 | 2.32E-66 | -1.69E-46 |
| MS.gene052825 | MS.gene83095 | 0.871321 | 7.47E-67 | -1.69E-46 |
| MS.gene052870 | MS.gene83095 | 0.84584 | 3.16E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene83095 | 0.851882 | 6.64E-61 | -1.69E-46 |
| MS.gene052966 | MS.gene83095 | 0.829344 | 5.43E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene83095 | 0.819206 | 1.31E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene83095 | 0.822907 | 1.84E-53 | -1.69E-46 |
| MS.gene053107 | MS.gene83095 | 0.835204 | 1.92E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene83095 | 0.876206 | 1.68E-68 | -1.69E-46 |
| MS.gene053207 | MS.gene83095 | 0.864128 | 1.52E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene83095 | 0.876003 | 1.97E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene83095 | 0.869405 | 3.17E-66 | -1.69E-46 |
| MS.gene053322 | MS.gene83095 | 0.831699 | 1.44E-55 | -1.69E-46 |
| MS.gene053421 | MS.gene83095 | -0.804389 | 2.21E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene83095 | 0.828422 | 9.07E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene83095 | 0.847688 | 9.87E-60 | -1.69E-46 |
| MS.gene053480 | MS.gene83095 | 0.842299 | 2.81E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene83095 | 0.857034 | 2.15E-62 | -1.69E-46 |
| MS.gene053579 | MS.gene83095 | 0.868355 | 6.95E-66 | -1.69E-46 |
| MS.gene053626 | MS.gene83095 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene83095 | 0.863272 | 2.80E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene83095 | 0.882069 | 1.42E-70 | -1.69E-46 |
| MS.gene053915 | MS.gene83095 | 0.802047 | 6.75E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene83095 | 0.811371 | 7.24E-51 | -1.69E-46 |
| MS.gene054343 | MS.gene83095 | 0.821293 | 4.36E-53 | -1.69E-46 |
| MS.gene054344 | MS.gene83095 | 0.80709 | 5.99E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene83095 | 0.867766 | 1.07E-65 | -1.69E-46 |
| MS.gene054595 | MS.gene83095 | 0.832393 | 9.70E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene83095 | 0.862559 | 4.65E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene83095 | 0.873514 | 1.39E-67 | -1.69E-46 |
| MS.gene054706 | MS.gene83095 | -0.832417 | 9.57E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene83095 | 0.874891 | 4.74E-68 | -1.69E-46 |
| MS.gene054884 | MS.gene83095 | -0.845371 | 4.23E-59 | -1.69E-46 |
| MS.gene054927 | MS.gene83095 | 0.849929 | 2.36E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene83095 | 0.862074 | 6.55E-64 | -1.69E-46 |
| MS.gene054959 | MS.gene83095 | -0.804614 | 1.99E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene83095 | 0.81499 | 1.16E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene83095 | -0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene83095 | 0.87534 | 3.33E-68 | -1.69E-46 |
| MS.gene055224 | MS.gene83095 | 0.830382 | 3.03E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene83095 | 0.854268 | 1.38E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene83095 | 0.866737 | 2.29E-65 | -1.69E-46 |
| MS.gene055370 | MS.gene83095 | 0.828682 | 7.85E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene83095 | 0.904637 | 9.96E-80 | -1.69E-46 |
| MS.gene055536 | MS.gene83095 | -0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene83095 | 0.903891 | 2.17E-79 | -1.69E-46 |
| MS.gene055722 | MS.gene83095 | 0.815373 | 9.56E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene83095 | 0.863102 | 3.16E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene83095 | 0.842772 | 2.11E-58 | -1.69E-46 |
| MS.gene055751 | MS.gene83095 | 0.848179 | 7.23E-60 | -1.69E-46 |
| MS.gene05589 | MS.gene83095 | 0.856042 | 4.20E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene83095 | 0.856808 | 2.50E-62 | -1.69E-46 |
| MS.gene055956 | MS.gene83095 | -0.802484 | 5.49E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene83095 | 0.808658 | 2.78E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene83095 | 0.835356 | 1.76E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene83095 | 0.80663 | 7.49E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene83095 | 0.830597 | 2.68E-55 | -1.69E-46 |
| MS.gene056409 | MS.gene83095 | 0.814582 | 1.43E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene83095 | 0.849406 | 3.30E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene83095 | 0.848156 | 7.34E-60 | -1.69E-46 |
| MS.gene056550 | MS.gene83095 | -0.823632 | 1.25E-53 | -1.69E-46 |
| MS.gene056590 | MS.gene83095 | -0.802308 | 5.97E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene83095 | -0.803611 | 3.21E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene83095 | 0.862734 | 4.11E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene83095 | 0.860274 | 2.32E-63 | -1.69E-46 |
| MS.gene056692 | MS.gene83095 | 0.886594 | 2.99E-72 | -1.69E-46 |
| MS.gene056877 | MS.gene83095 | 0.816119 | 6.52E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene83095 | 0.819882 | 9.20E-53 | -1.69E-46 |
| MS.gene056898 | MS.gene83095 | 0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene83095 | 0.805654 | 1.20E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene83095 | 0.833214 | 6.07E-56 | -1.69E-46 |
| MS.gene057048 | MS.gene83095 | 0.850336 | 1.81E-60 | -1.69E-46 |
| MS.gene057076 | MS.gene83095 | 0.823406 | 1.41E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene83095 | 0.82814 | 1.06E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene83095 | 0.807137 | 5.85E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene83095 | 0.861639 | 8.91E-64 | -1.69E-46 |
| MS.gene057261 | MS.gene83095 | -0.802713 | 4.92E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene83095 | 0.811219 | 7.81E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene83095 | 0.848521 | 5.81E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene83095 | 0.864118 | 1.53E-64 | -1.69E-46 |
| MS.gene057658 | MS.gene83095 | 0.906528 | 1.35E-80 | -1.69E-46 |
| MS.gene057831 | MS.gene83095 | 0.879435 | 1.25E-69 | -1.69E-46 |
| MS.gene057856 | MS.gene83095 | 0.803942 | 2.74E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene83095 | 0.811556 | 6.60E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene83095 | 0.83322 | 6.04E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene83095 | 0.841811 | 3.79E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene83095 | 0.810694 | 1.01E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene83095 | -0.825176 | 5.41E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene83095 | 0.854331 | 1.32E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene83095 | 0.894244 | 2.96E-75 | -1.69E-46 |
| MS.gene058418 | MS.gene83095 | -0.805572 | 1.25E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene83095 | 0.902275 | 1.14E-78 | -1.69E-46 |
| MS.gene058444 | MS.gene83095 | 0.811273 | 7.60E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene83095 | 0.920311 | 1.50E-87 | -1.69E-46 |
| MS.gene058603 | MS.gene83095 | -0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene83095 | 0.827702 | 1.35E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene83095 | 0.857302 | 1.79E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene83095 | 0.890496 | 9.35E-74 | -1.69E-46 |
| MS.gene05883 | MS.gene83095 | 0.84699 | 1.53E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene83095 | 0.862068 | 6.58E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene83095 | 0.918966 | 8.11E-87 | -1.69E-46 |
| MS.gene059029 | MS.gene83095 | 0.821666 | 3.58E-53 | -1.69E-46 |
| MS.gene05912 | MS.gene83095 | 0.816537 | 5.25E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene83095 | 0.800894 | 1.16E-48 | -1.69E-46 |
| MS.gene05914 | MS.gene83095 | 0.895788 | 6.87E-76 | -1.69E-46 |
| MS.gene05934 | MS.gene83095 | 0.883585 | 3.96E-71 | -1.69E-46 |
| MS.gene059526 | MS.gene83095 | -0.821761 | 3.40E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene83095 | 0.841895 | 3.60E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene83095 | 0.829413 | 5.22E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene83095 | 0.890171 | 1.25E-73 | -1.69E-46 |
| MS.gene059718 | MS.gene83095 | 0.883494 | 4.28E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene83095 | 0.880236 | 6.48E-70 | -1.69E-46 |
| MS.gene059801 | MS.gene83095 | 0.834938 | 2.24E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene83095 | 0.830895 | 2.27E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene83095 | 0.848801 | 4.86E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene83095 | 0.826217 | 3.06E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene83095 | 0.826047 | 3.36E-54 | -1.69E-46 |
| MS.gene06027 | MS.gene83095 | 0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene83095 | 0.821125 | 4.77E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene83095 | 0.875001 | 4.35E-68 | -1.69E-46 |
| MS.gene06077 | MS.gene83095 | 0.888497 | 5.60E-73 | -1.69E-46 |
| MS.gene060804 | MS.gene83095 | 0.808008 | 3.83E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene83095 | 0.83504 | 2.11E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene83095 | 0.918566 | 1.33E-86 | -1.69E-46 |
| MS.gene060982 | MS.gene83095 | 0.853564 | 2.20E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene83095 | 0.904378 | 1.31E-79 | -1.69E-46 |
| MS.gene061200 | MS.gene83095 | 0.809567 | 1.78E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83095.t1 | MTR_1g031740 | 81.928 | 83 | 9 | 1 | 1 | 83 | 76 | 152 | 4.62e-43 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 37 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAGTGGCTGGGTGAAAA+TGG | 0.232098 | 1.2:+16616795 | MS.gene83095:CDS |
| TTGTGTTGGGTGGTTGGCTT+GGG | 0.291830 | 1.2:-16617214 | None:intergenic |
| TCTCGAGATCTACAAGTCTT+TGG | 0.331857 | 1.2:+16617161 | MS.gene83095:CDS |
| ATTGTGTTGGGTGGTTGGCT+TGG | 0.342575 | 1.2:-16617215 | None:intergenic |
| CCTGGATTGTGTTGGGTGGT+TGG | 0.351530 | 1.2:-16617220 | None:intergenic |
| GACCACGATGGATTTGTTCT+TGG | 0.365556 | 1.2:+16616728 | MS.gene83095:CDS |
| CCAACCACCCAACACAATCC+AGG | 0.377108 | 1.2:+16617220 | MS.gene83095:CDS |
| ACCACGATGGATTTGTTCTT+GGG | 0.379690 | 1.2:+16616729 | MS.gene83095:CDS |
| GAGAGTGGCTGGGTGAAAAT+GGG | 0.391269 | 1.2:+16616796 | MS.gene83095:CDS |
| GGTGTTAGTGGAGCGAAATC+TGG | 0.391808 | 1.2:-16616823 | None:intergenic |
| TTGCTACTTACTGGTGTTAG+TGG | 0.404594 | 1.2:-16616835 | None:intergenic |
| TGAAGGCCCTGGATTGTGTT+GGG | 0.448909 | 1.2:-16617227 | None:intergenic |
| GAGGGAAACAGGAGAGTGGC+TGG | 0.452230 | 1.2:+16616785 | MS.gene83095:CDS |
| CTGAAGGCCCTGGATTGTGT+TGG | 0.456207 | 1.2:-16617228 | None:intergenic |
| ATTGTTGAGGGAGAGGCAAT+AGG | 0.476898 | 1.2:-16617255 | None:intergenic |
| TTCTTGGGACAAGTATTTGA+AGG | 0.485835 | 1.2:+16616744 | MS.gene83095:CDS |
| ATTGAACGTGCCCTTGGCGC+TGG | 0.500974 | 1.2:+16616495 | MS.gene83095:CDS |
| AATAGGTCTGCTGAAGGCCC+TGG | 0.505378 | 1.2:-16617238 | None:intergenic |
| GTCTCATATTGTTGAGGGAG+AGG | 0.509046 | 1.2:-16617262 | None:intergenic |
| ATGCAAATTGAACGTGCCCT+TGG | 0.511985 | 1.2:+16616489 | MS.gene83095:CDS |
| GACAGAGCATACTTGAGGTC+AGG | 0.519678 | 1.2:-16616537 | None:intergenic |
| CTCTGAAGCTACCAGCGCCA+AGG | 0.529782 | 1.2:-16616506 | None:intergenic |
| CTAGATGTCTCATATTGTTG+AGG | 0.544710 | 1.2:-16617268 | None:intergenic |
| TAGATGTCTCATATTGTTGA+GGG | 0.546163 | 1.2:-16617267 | None:intergenic |
| CAACCACCCAACACAATCCA+GGG | 0.567075 | 1.2:+16617221 | MS.gene83095:CDS |
| TCTTGGGACAAGTATTTGAA+GGG | 0.567555 | 1.2:+16616745 | MS.gene83095:CDS |
| AGAGTGGCTGGGTGAAAATG+GGG | 0.590303 | 1.2:+16616797 | MS.gene83095:CDS |
| TCTGAAGCTACCAGCGCCAA+GGG | 0.590855 | 1.2:-16616505 | None:intergenic |
| CTCGAGACAAGCAATGGACG+AGG | 0.601787 | 1.2:-16617145 | None:intergenic |
| AGGGAAACAGGAGAGTGGCT+GGG | 0.620803 | 1.2:+16616786 | MS.gene83095:CDS |
| GGCGCTGGTAGCTTCAGAGA+CGG | 0.635842 | 1.2:+16616510 | MS.gene83095:CDS |
| AGAGGCAATAGGTCTGCTGA+AGG | 0.636549 | 1.2:-16617244 | None:intergenic |
| AGGCCCTGGATTGTGTTGGG+TGG | 0.642633 | 1.2:-16617224 | None:intergenic |
| GTAGATCTCGAGACAAGCAA+TGG | 0.668961 | 1.2:-16617151 | None:intergenic |
| AGCTGAGGGAAACAGGAGAG+TGG | 0.671817 | 1.2:+16616781 | MS.gene83095:CDS |
| TCCCAAGAACAAATCCATCG+TGG | 0.736351 | 1.2:-16616730 | None:intergenic |
| AGACGTAAAGAAGACCACGA+TGG | 0.745068 | 1.2:+16616716 | MS.gene83095:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAACATTATGATGAAT+AGG | + | chr1.2:16616590-16616609 | MS.gene83095:intron | 15.0% |
| !!! | TTGTTTTTTAAATAAGAAAC+TGG | + | chr1.2:16617024-16617043 | MS.gene83095:intron | 15.0% |
| !! | TGTTAAAGAGACAAAAAATA+CGG | - | chr1.2:16616876-16616895 | None:intergenic | 20.0% |
| !!! | CACTTTTAACATTATGAAAT+TGG | - | chr1.2:16616632-16616651 | None:intergenic | 20.0% |
| !!! | TATTTTTTGTCTCTTTAACA+AGG | + | chr1.2:16616876-16616895 | MS.gene83095:intron | 20.0% |
| !!! | TCTTTTGCTTTGTTATATAT+AGG | + | chr1.2:16616910-16616929 | MS.gene83095:intron | 20.0% |
| ! | AGATTATTACTTCTTACAAC+TGG | - | chr1.2:16617082-16617101 | None:intergenic | 25.0% |
| ! | ATCAAAATCCAGAATGAAAT+TGG | - | chr1.2:16616657-16616676 | None:intergenic | 25.0% |
| ! | GTTGTAAGAAGTAATAATCT+TGG | + | chr1.2:16617082-16617101 | MS.gene83095:intron | 25.0% |
| TAGATGTCTCATATTGTTGA+GGG | - | chr1.2:16617270-16617289 | None:intergenic | 30.0% | |
| TTATATATAGGTGATGAGTG+AGG | + | chr1.2:16616922-16616941 | MS.gene83095:intron | 30.0% | |
| CTAGATGTCTCATATTGTTG+AGG | - | chr1.2:16617271-16617290 | None:intergenic | 35.0% | |
| GTGAGGAAAAACACAAGTTA+TGG | + | chr1.2:16616939-16616958 | MS.gene83095:intron | 35.0% | |
| TCTTGGGACAAGTATTTGAA+GGG | + | chr1.2:16616745-16616764 | MS.gene83095:CDS | 35.0% | |
| TTCTTGGGACAAGTATTTGA+AGG | + | chr1.2:16616744-16616763 | MS.gene83095:CDS | 35.0% | |
| ! | AAAGTGCTCCAATTTCATTC+TGG | + | chr1.2:16616646-16616665 | MS.gene83095:intron | 35.0% |
| AAACAGACAGAGCATACTTG+AGG | - | chr1.2:16616545-16616564 | None:intergenic | 40.0% | |
| TAACACCAGTAAGTAGCAAC+TGG | + | chr1.2:16616839-16616858 | MS.gene83095:intron | 40.0% | |
| TCTCGAGATCTACAAGTCTT+TGG | + | chr1.2:16617161-16617180 | MS.gene83095:CDS | 40.0% | |
| ! | ACCACGATGGATTTGTTCTT+GGG | + | chr1.2:16616729-16616748 | MS.gene83095:CDS | 40.0% |
| ! | TTGCTACTTACTGGTGTTAG+TGG | - | chr1.2:16616838-16616857 | None:intergenic | 40.0% |
| AGACGTAAAGAAGACCACGA+TGG | + | chr1.2:16616716-16616735 | MS.gene83095:CDS | 45.0% | |
| ATGCAAATTGAACGTGCCCT+TGG | + | chr1.2:16616489-16616508 | MS.gene83095:CDS | 45.0% | |
| ATTGTTGAGGGAGAGGCAAT+AGG | - | chr1.2:16617258-16617277 | None:intergenic | 45.0% | |
| CAGAAAAAGCTGAGGGAAAC+AGG | + | chr1.2:16616774-16616793 | MS.gene83095:CDS | 45.0% | |
| GACTGTGCAGAAAAAGCTGA+GGG | + | chr1.2:16616767-16616786 | MS.gene83095:CDS | 45.0% | |
| GTAGATCTCGAGACAAGCAA+TGG | - | chr1.2:16617154-16617173 | None:intergenic | 45.0% | |
| GTCTCATATTGTTGAGGGAG+AGG | - | chr1.2:16617265-16617284 | None:intergenic | 45.0% | |
| TCCCAAGAACAAATCCATCG+TGG | - | chr1.2:16616733-16616752 | None:intergenic | 45.0% | |
| ! | CGTTACCAGTTGCTACTTAC+TGG | - | chr1.2:16616847-16616866 | None:intergenic | 45.0% |
| ! | GACCACGATGGATTTGTTCT+TGG | + | chr1.2:16616728-16616747 | MS.gene83095:CDS | 45.0% |
| AGAGGCAATAGGTCTGCTGA+AGG | - | chr1.2:16617247-16617266 | None:intergenic | 50.0% | |
| AGAGTGGCTGGGTGAAAATG+GGG | + | chr1.2:16616797-16616816 | MS.gene83095:CDS | 50.0% | |
| CAACCACCCAACACAATCCA+GGG | + | chr1.2:16617221-16617240 | MS.gene83095:CDS | 50.0% | |
| CGAGGCCTACAATTTAGCGA+AGG | - | chr1.2:16617130-16617149 | None:intergenic | 50.0% | |
| CGAGGCCTTCGCTAAATTGT+AGG | + | chr1.2:16617122-16617141 | MS.gene83095:intron | 50.0% | |
| GACAGAGCATACTTGAGGTC+AGG | - | chr1.2:16616540-16616559 | None:intergenic | 50.0% | |
| GAGAGTGGCTGGGTGAAAAT+GGG | + | chr1.2:16616796-16616815 | MS.gene83095:CDS | 50.0% | |
| GGACTGTGCAGAAAAAGCTG+AGG | + | chr1.2:16616766-16616785 | MS.gene83095:CDS | 50.0% | |
| GGTGTTAGTGGAGCGAAATC+TGG | - | chr1.2:16616826-16616845 | None:intergenic | 50.0% | |
| TGAAGGCCCTGGATTGTGTT+GGG | - | chr1.2:16617230-16617249 | None:intergenic | 50.0% | |
| ! | ATTGTGTTGGGTGGTTGGCT+TGG | - | chr1.2:16617218-16617237 | None:intergenic | 50.0% |
| ! | GAGACTAGCTGATGAAGACG+AGG | + | chr1.2:16617104-16617123 | MS.gene83095:intron | 50.0% |
| !! | TTGTGTTGGGTGGTTGGCTT+GGG | - | chr1.2:16617217-16617236 | None:intergenic | 50.0% |
| AATAGGTCTGCTGAAGGCCC+TGG | - | chr1.2:16617241-16617260 | None:intergenic | 55.0% | |
| AGCTGAGGGAAACAGGAGAG+TGG | + | chr1.2:16616781-16616800 | MS.gene83095:CDS | 55.0% | |
| AGGGAAACAGGAGAGTGGCT+GGG | + | chr1.2:16616786-16616805 | MS.gene83095:CDS | 55.0% | |
| CCAACCACCCAACACAATCC+AGG | + | chr1.2:16617220-16617239 | MS.gene83095:CDS | 55.0% | |
| CCTGGATTGTGTTGGGTGGT+TGG | - | chr1.2:16617223-16617242 | None:intergenic | 55.0% | |
| CTCGAGACAAGCAATGGACG+AGG | - | chr1.2:16617148-16617167 | None:intergenic | 55.0% | |
| CTGAAGGCCCTGGATTGTGT+TGG | - | chr1.2:16617231-16617250 | None:intergenic | 55.0% | |
| GGAGAGTGGCTGGGTGAAAA+TGG | + | chr1.2:16616795-16616814 | MS.gene83095:CDS | 55.0% | |
| ! | TCTGAAGCTACCAGCGCCAA+GGG | - | chr1.2:16616508-16616527 | None:intergenic | 55.0% |
| AGGCCCTGGATTGTGTTGGG+TGG | - | chr1.2:16617227-16617246 | None:intergenic | 60.0% | |
| ATTGAACGTGCCCTTGGCGC+TGG | + | chr1.2:16616495-16616514 | MS.gene83095:CDS | 60.0% | |
| GAGGGAAACAGGAGAGTGGC+TGG | + | chr1.2:16616785-16616804 | MS.gene83095:CDS | 60.0% | |
| !! | CTCTGAAGCTACCAGCGCCA+AGG | - | chr1.2:16616509-16616528 | None:intergenic | 60.0% |
| !! | GGCGCTGGTAGCTTCAGAGA+CGG | + | chr1.2:16616510-16616529 | MS.gene83095:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 16616489 | 16617301 | 16616489 | ID=MS.gene83095 |
| chr1.2 | mRNA | 16616489 | 16617301 | 16616489 | ID=MS.gene83095.t1;Parent=MS.gene83095 |
| chr1.2 | exon | 16616489 | 16616547 | 16616489 | ID=MS.gene83095.t1.exon1;Parent=MS.gene83095.t1 |
| chr1.2 | CDS | 16616489 | 16616547 | 16616489 | ID=cds.MS.gene83095.t1;Parent=MS.gene83095.t1 |
| chr1.2 | exon | 16616701 | 16616846 | 16616701 | ID=MS.gene83095.t1.exon2;Parent=MS.gene83095.t1 |
| chr1.2 | CDS | 16616701 | 16616846 | 16616701 | ID=cds.MS.gene83095.t1;Parent=MS.gene83095.t1 |
| chr1.2 | exon | 16617144 | 16617301 | 16617144 | ID=MS.gene83095.t1.exon3;Parent=MS.gene83095.t1 |
| chr1.2 | CDS | 16617144 | 16617301 | 16617144 | ID=cds.MS.gene83095.t1;Parent=MS.gene83095.t1 |
| Gene Sequence |
| Protein sequence |
