Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33972.t1 | XP_013469505.1 | 95 | 338 | 13 | 1 | 1 | 338 | 3 | 336 | 2.40E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33972.t1 | B9DHG0 | 59.5 | 306 | 113 | 4 | 35 | 338 | 4 | 300 | 2.3e-86 | 320.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33972.t1 | A0A072VQ51 | 95.0 | 338 | 13 | 1 | 1 | 338 | 3 | 336 | 1.8e-172 | 614.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene33972 | 0.817831 | 2.69E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene33972 | 0.855654 | 5.46E-62 | -1.69E-46 |
| MS.gene049356 | MS.gene33972 | 0.829169 | 5.98E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene33972 | 0.873238 | 1.72E-67 | -1.69E-46 |
| MS.gene049491 | MS.gene33972 | 0.83646 | 9.24E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene33972 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene33972 | 0.810704 | 1.01E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene33972 | 0.822899 | 1.85E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene33972 | 0.813902 | 2.02E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene33972 | 0.833788 | 4.36E-56 | -1.69E-46 |
| MS.gene050099 | MS.gene33972 | 0.82497 | 6.05E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene33972 | 0.881569 | 2.15E-70 | -1.69E-46 |
| MS.gene050397 | MS.gene33972 | 0.823376 | 1.43E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene33972 | 0.866506 | 2.71E-65 | -1.69E-46 |
| MS.gene050464 | MS.gene33972 | 0.80312 | 4.06E-49 | -1.69E-46 |
| MS.gene050507 | MS.gene33972 | 0.803817 | 2.91E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene33972 | 0.835703 | 1.44E-56 | -1.69E-46 |
| MS.gene050538 | MS.gene33972 | 0.800677 | 1.29E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene33972 | 0.838726 | 2.42E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene33972 | 0.889927 | 1.56E-73 | -1.69E-46 |
| MS.gene050770 | MS.gene33972 | 0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene050783 | MS.gene33972 | 0.850503 | 1.63E-60 | -1.69E-46 |
| MS.gene050812 | MS.gene33972 | 0.899931 | 1.21E-77 | -1.69E-46 |
| MS.gene05101 | MS.gene33972 | 0.850706 | 1.43E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene33972 | 0.866723 | 2.31E-65 | -1.69E-46 |
| MS.gene051360 | MS.gene33972 | 0.823149 | 1.62E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene33972 | 0.847952 | 8.35E-60 | -1.69E-46 |
| MS.gene051471 | MS.gene33972 | 0.817606 | 3.02E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene33972 | 0.829272 | 5.65E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene33972 | 0.866441 | 2.85E-65 | -1.69E-46 |
| MS.gene051666 | MS.gene33972 | 0.84694 | 1.58E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene33972 | 0.810122 | 1.35E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene33972 | -0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene33972 | 0.840715 | 7.36E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene33972 | 0.905612 | 3.57E-80 | -1.69E-46 |
| MS.gene052253 | MS.gene33972 | 0.836424 | 9.43E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene33972 | 0.875953 | 2.05E-68 | -1.69E-46 |
| MS.gene052322 | MS.gene33972 | 0.815881 | 7.37E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene33972 | 0.847254 | 1.30E-59 | -1.69E-46 |
| MS.gene052340 | MS.gene33972 | 0.852376 | 4.81E-61 | -1.69E-46 |
| MS.gene052379 | MS.gene33972 | 0.804265 | 2.35E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene33972 | 0.810594 | 1.07E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene33972 | 0.829118 | 6.16E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene33972 | 0.831767 | 1.38E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene33972 | 0.826586 | 2.50E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene33972 | 0.876063 | 1.88E-68 | -1.69E-46 |
| MS.gene052982 | MS.gene33972 | 0.807733 | 4.38E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene33972 | 0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene053107 | MS.gene33972 | 0.860355 | 2.19E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene33972 | 0.82337 | 1.44E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene33972 | 0.855758 | 5.09E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene33972 | 0.826229 | 3.04E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene33972 | 0.816998 | 4.14E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene33972 | 0.800278 | 1.55E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene33972 | 0.846142 | 2.62E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene33972 | 0.825215 | 5.29E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene33972 | 0.857122 | 2.02E-62 | -1.69E-46 |
| MS.gene054349 | MS.gene33972 | 0.823837 | 1.12E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene33972 | 0.812562 | 3.98E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene33972 | 0.806737 | 7.11E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene33972 | 0.839632 | 1.41E-57 | -1.69E-46 |
| MS.gene054719 | MS.gene33972 | 0.824641 | 7.23E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene33972 | 0.817034 | 4.07E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene33972 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene054804 | MS.gene33972 | 0.817055 | 4.02E-52 | -1.69E-46 |
| MS.gene054955 | MS.gene33972 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene33972 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene33972 | 0.865715 | 4.83E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene33972 | 0.85996 | 2.88E-63 | -1.69E-46 |
| MS.gene055369 | MS.gene33972 | 0.823474 | 1.36E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene33972 | 0.864632 | 1.06E-64 | -1.69E-46 |
| MS.gene055397 | MS.gene33972 | 0.809612 | 1.74E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene33972 | 0.831202 | 1.91E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene33972 | 0.835042 | 2.11E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene33972 | 0.834069 | 3.71E-56 | -1.69E-46 |
| MS.gene055539 | MS.gene33972 | 0.83829 | 3.14E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene33972 | 0.856047 | 4.19E-62 | -1.69E-46 |
| MS.gene055564 | MS.gene33972 | 0.826063 | 3.33E-54 | -1.69E-46 |
| MS.gene055604 | MS.gene33972 | 0.819845 | 9.38E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene33972 | 0.807186 | 5.72E-50 | -1.69E-46 |
| MS.gene055896 | MS.gene33972 | 0.807452 | 5.02E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene33972 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene33972 | 0.802559 | 5.30E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene33972 | 0.805136 | 1.54E-49 | -1.69E-46 |
| MS.gene05602 | MS.gene33972 | 0.838802 | 2.32E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene33972 | 0.833524 | 5.08E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene33972 | 0.897758 | 1.03E-76 | -1.69E-46 |
| MS.gene056410 | MS.gene33972 | 0.856674 | 2.74E-62 | -1.69E-46 |
| MS.gene056511 | MS.gene33972 | 0.820968 | 5.18E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene33972 | 0.846473 | 2.12E-59 | -1.69E-46 |
| MS.gene056612 | MS.gene33972 | 0.843043 | 1.79E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene33972 | 0.84836 | 6.44E-60 | -1.69E-46 |
| MS.gene056723 | MS.gene33972 | 0.835267 | 1.85E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene33972 | 0.85807 | 1.06E-62 | -1.69E-46 |
| MS.gene056897 | MS.gene33972 | 0.817145 | 3.84E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene33972 | 0.845687 | 3.48E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene33972 | 0.826688 | 2.36E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene33972 | 0.833965 | 3.94E-56 | -1.69E-46 |
| MS.gene057124 | MS.gene33972 | 0.857759 | 1.31E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene33972 | 0.816375 | 5.71E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene33972 | 0.840242 | 9.79E-58 | -1.69E-46 |
| MS.gene057331 | MS.gene33972 | 0.804727 | 1.88E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene33972 | 0.815581 | 8.59E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene33972 | 0.8063 | 8.79E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene33972 | 0.859049 | 5.41E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene33972 | 0.850101 | 2.11E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene33972 | 0.858934 | 5.86E-63 | -1.69E-46 |
| MS.gene057749 | MS.gene33972 | 0.846313 | 2.35E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene33972 | 0.847925 | 8.49E-60 | -1.69E-46 |
| MS.gene057927 | MS.gene33972 | 0.812374 | 4.38E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene33972 | 0.89079 | 7.16E-74 | -1.69E-46 |
| MS.gene058007 | MS.gene33972 | 0.821067 | 4.92E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene33972 | 0.851928 | 6.44E-61 | -1.69E-46 |
| MS.gene058082 | MS.gene33972 | 0.842047 | 3.28E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene33972 | 0.869426 | 3.12E-66 | -1.69E-46 |
| MS.gene058142 | MS.gene33972 | 0.82831 | 9.65E-55 | -1.69E-46 |
| MS.gene058233 | MS.gene33972 | 0.874361 | 7.17E-68 | -1.69E-46 |
| MS.gene058276 | MS.gene33972 | 0.823564 | 1.29E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene33972 | 0.890295 | 1.12E-73 | -1.69E-46 |
| MS.gene058365 | MS.gene33972 | 0.902887 | 6.12E-79 | -1.69E-46 |
| MS.gene05842 | MS.gene33972 | 0.802495 | 5.46E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene33972 | 0.810275 | 1.25E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene33972 | 0.898178 | 6.84E-77 | -1.69E-46 |
| MS.gene058700 | MS.gene33972 | 0.831441 | 1.67E-55 | -1.69E-46 |
| MS.gene058787 | MS.gene33972 | 0.833442 | 5.32E-56 | -1.69E-46 |
| MS.gene05886 | MS.gene33972 | 0.81089 | 9.21E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene33972 | 0.813272 | 2.78E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene33972 | 0.819806 | 9.57E-53 | -1.69E-46 |
| MS.gene058949 | MS.gene33972 | 0.808919 | 2.44E-50 | -1.69E-46 |
| MS.gene058993 | MS.gene33972 | 0.824954 | 6.10E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene33972 | 0.883511 | 4.22E-71 | -1.69E-46 |
| MS.gene059141 | MS.gene33972 | 0.810578 | 1.08E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene33972 | 0.827846 | 1.25E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene33972 | 0.818359 | 2.04E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene33972 | 0.853573 | 2.19E-61 | -1.69E-46 |
| MS.gene059518 | MS.gene33972 | 0.805858 | 1.09E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene33972 | 0.831295 | 1.81E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene33972 | 0.849481 | 3.14E-60 | -1.69E-46 |
| MS.gene05959 | MS.gene33972 | 0.826792 | 2.23E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene33972 | 0.897262 | 1.67E-76 | -1.69E-46 |
| MS.gene059688 | MS.gene33972 | 0.886886 | 2.31E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene33972 | 0.891862 | 2.70E-74 | -1.69E-46 |
| MS.gene059695 | MS.gene33972 | 0.894543 | 2.23E-75 | -1.69E-46 |
| MS.gene059708 | MS.gene33972 | 0.826512 | 2.61E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene33972 | 0.822986 | 1.77E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene33972 | 0.834093 | 3.66E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene33972 | 0.850193 | 1.99E-60 | -1.69E-46 |
| MS.gene060193 | MS.gene33972 | 0.823821 | 1.13E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene33972 | 0.818589 | 1.81E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene33972 | 0.840429 | 8.74E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene33972 | 0.857864 | 1.22E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene33972 | 0.853467 | 2.34E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene33972 | 0.819555 | 1.09E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene33972 | 0.824057 | 9.92E-54 | -1.69E-46 |
| MS.gene06090 | MS.gene33972 | 0.826654 | 2.41E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene33972 | 0.818738 | 1.68E-52 | -1.69E-46 |
| MS.gene060971 | MS.gene33972 | 0.819948 | 8.88E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene33972 | 0.850781 | 1.36E-60 | -1.69E-46 |
| MS.gene061051 | MS.gene33972 | -0.859888 | 3.03E-63 | -1.69E-46 |
| MS.gene061154 | MS.gene33972 | 0.84578 | 3.28E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene33972 | 0.846515 | 2.07E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33972.t1 | MTR_1g096230 | 94.970 | 338 | 13 | 1 | 1 | 338 | 3 | 336 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33972.t1 | AT1G22700 | 59.609 | 307 | 112 | 5 | 35 | 338 | 4 | 301 | 1.59e-108 | 319 |
| MS.gene33972.t1 | AT1G22700 | 60.131 | 306 | 107 | 5 | 35 | 338 | 4 | 296 | 2.13e-108 | 318 |
| MS.gene33972.t1 | AT1G22700 | 79.397 | 199 | 41 | 0 | 133 | 331 | 6 | 204 | 1.31e-104 | 305 |
Find 87 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTGGGTTTGCTCGGGGC+TGG | 0.202462 | 1.4:-74797277 | MS.gene33972:CDS |
| CGCGATGGGAAGCTTGAAAA+AGG | 0.299030 | 1.4:-74796173 | MS.gene33972:CDS |
| TGTTGGGTTTGCTCGGGGCT+GGG | 0.317976 | 1.4:-74797276 | MS.gene33972:CDS |
| TGCTTCAAGCTATTGAGAAA+TGG | 0.326316 | 1.4:-74796694 | MS.gene33972:CDS |
| CAAGAATGCCGAAGCCCATT+TGG | 0.335864 | 1.4:+74797426 | None:intergenic |
| AAGAGGTTGAAAGGTGGATT+TGG | 0.348100 | 1.4:+74799025 | None:intergenic |
| GGCCGTGCAATCTTGTTGTT+AGG | 0.361482 | 1.4:+74796014 | None:intergenic |
| GAAAGAGAAGGAGAAGAGTA+AGG | 0.371916 | 1.4:+74799062 | None:intergenic |
| GCAGTAGCAAGTATATTAGT+TGG | 0.384763 | 1.4:+74797299 | None:intergenic |
| CTACTGCTGTTGGGTTTGCT+CGG | 0.387033 | 1.4:-74797283 | MS.gene33972:CDS |
| GCCTTGGGAATTCAGCAAAC+AGG | 0.388920 | 1.4:-74798663 | MS.gene33972:CDS |
| CAGTGGAAAATCTTCAAGAT+TGG | 0.395260 | 1.4:-74797459 | MS.gene33972:CDS |
| TTACAGAAAGATTAAAGCCT+TGG | 0.400133 | 1.4:-74798679 | MS.gene33972:intron |
| TACTGCTGTTGGGTTTGCTC+GGG | 0.408318 | 1.4:-74797282 | MS.gene33972:CDS |
| GCTTCAAGCTATTGAGAAAT+GGG | 0.415882 | 1.4:-74796693 | MS.gene33972:CDS |
| AAGGTGTTACTGTCAGATAT+AGG | 0.419915 | 1.4:-74795953 | MS.gene33972:CDS |
| AGGTGTTACTGTCAGATATA+GGG | 0.420068 | 1.4:-74795952 | MS.gene33972:CDS |
| CCCTGTTTGCTGAATTCCCA+AGG | 0.422052 | 1.4:+74798662 | None:intergenic |
| AATATACTTGCTACTGCTGT+TGG | 0.422402 | 1.4:-74797293 | MS.gene33972:CDS |
| TACAGAAAGATTAAAGCCTT+GGG | 0.422829 | 1.4:-74798678 | MS.gene33972:intron |
| GTAAGGGAAATGAGTGAAAG+TGG | 0.427395 | 1.4:+74799079 | None:intergenic |
| GAAGATAAATGAGATGTATC+AGG | 0.428820 | 1.4:-74797347 | MS.gene33972:CDS |
| TAAATGAGATGTATCAGGTT+GGG | 0.429785 | 1.4:-74797342 | MS.gene33972:CDS |
| GATTCTTTGAAGGAACTTGT+TGG | 0.432188 | 1.4:-74795984 | MS.gene33972:CDS |
| AGCAAGAACTTGGTAGCAGC+TGG | 0.444627 | 1.4:+74796713 | None:intergenic |
| GAGATAAGAGTAGAGGGAAG+AGG | 0.453027 | 1.4:+74799008 | None:intergenic |
| ATATACTTGCTACTGCTGTT+GGG | 0.457513 | 1.4:-74797292 | MS.gene33972:CDS |
| GAAATGGGATGGAGAAAGTC+AGG | 0.462836 | 1.4:-74796678 | MS.gene33972:CDS |
| GTCACAGCATGGAACAATCT+TGG | 0.463501 | 1.4:-74796107 | MS.gene33972:CDS |
| CAAGAGTAGGATTCTACTCC+AGG | 0.474183 | 1.4:-74798607 | MS.gene33972:intron |
| CTTGCAACTCTTTAGCAGAA+AGG | 0.474641 | 1.4:+74797209 | None:intergenic |
| TTCCATGCTGTGACATAGCC+TGG | 0.480857 | 1.4:+74796116 | None:intergenic |
| GTTGGGGAGTTGTTTGACTT+AGG | 0.481415 | 1.4:-74797325 | MS.gene33972:CDS |
| GCTCTCTGCGGACAAGAACT+TGG | 0.483373 | 1.4:+74797236 | None:intergenic |
| GCGACTGAGCTGTTTGAACT+TGG | 0.485378 | 1.4:-74796764 | MS.gene33972:CDS |
| TTAGAAGAGATAAGAGTAGA+GGG | 0.495285 | 1.4:+74799002 | None:intergenic |
| AATAGCTTGAAGCAAGAACT+TGG | 0.496680 | 1.4:+74796703 | None:intergenic |
| ATATAGGTTTACAACGCTCT+TGG | 0.496693 | 1.4:-74796209 | MS.gene33972:intron |
| AAAGTCATCCAAATGGGCTT+CGG | 0.497663 | 1.4:-74797434 | MS.gene33972:CDS |
| ATTGGAGAAAGTCATCCAAA+TGG | 0.504065 | 1.4:-74797441 | MS.gene33972:CDS |
| AGTAGAGGGAAGAGGTTGAA+AGG | 0.504073 | 1.4:+74799016 | None:intergenic |
| ATGGTTATAAGGGGTTCCAT+TGG | 0.504983 | 1.4:+74798253 | None:intergenic |
| GGATTTGGAAGGGAAGATAG+AGG | 0.511583 | 1.4:+74799040 | None:intergenic |
| AAAGAGAAGGAGAAGAGTAA+GGG | 0.517442 | 1.4:+74799063 | None:intergenic |
| AAATGAGATGTATCAGGTTG+GGG | 0.518043 | 1.4:-74797341 | MS.gene33972:CDS |
| AGAATATCCGTCTGCACTGA+AGG | 0.520074 | 1.4:-74796063 | MS.gene33972:CDS |
| TTCCTTCAAAGAATCTCTCC+TGG | 0.520808 | 1.4:+74795992 | None:intergenic |
| TCACTTGCATATGAAACATC+AGG | 0.526055 | 1.4:+74797376 | None:intergenic |
| AGAGGGAAGAGGTTGAAAGG+TGG | 0.526471 | 1.4:+74799019 | None:intergenic |
| GGTGTCAGTTATGTTCGCGA+TGG | 0.530417 | 1.4:-74796188 | MS.gene33972:CDS |
| TTTAGAAGAGATAAGAGTAG+AGG | 0.532380 | 1.4:+74799001 | None:intergenic |
| TTGGAGAAAGTCATCCAAAT+GGG | 0.533339 | 1.4:-74797440 | MS.gene33972:CDS |
| ACAACAAGATTGCACGGCCC+AGG | 0.538823 | 1.4:-74796010 | MS.gene33972:CDS |
| GGTAATTACTTGAATGAGCA+TGG | 0.544574 | 1.4:+74798963 | None:intergenic |
| GGTTGAAAGGTGGATTTGGA+AGG | 0.545078 | 1.4:+74799029 | None:intergenic |
| GTGTCAGTTATGTTCGCGAT+GGG | 0.546218 | 1.4:-74796187 | MS.gene33972:CDS |
| TCCTTCAAAGAATCTCTCCT+GGG | 0.546723 | 1.4:+74795993 | None:intergenic |
| TCCTACTCTTGACTGTATCA+AGG | 0.546925 | 1.4:+74798619 | None:intergenic |
| GCCCAGGAGAGATTCTTTGA+AGG | 0.556482 | 1.4:-74795994 | MS.gene33972:CDS |
| GACGAAGACAGATGTTTCAA+AGG | 0.556964 | 1.4:-74798282 | MS.gene33972:intron |
| GTTGAAAGGTGGATTTGGAA+GGG | 0.560338 | 1.4:+74799030 | None:intergenic |
| ATAAATGAGATGTATCAGGT+TGG | 0.560724 | 1.4:-74797343 | MS.gene33972:CDS |
| ATCCTAACAACAAGATTGCA+CGG | 0.562865 | 1.4:-74796016 | MS.gene33972:CDS |
| AACTTGGTGCAGTGATGTTG+CGG | 0.566153 | 1.4:-74796748 | MS.gene33972:CDS |
| CCTTGGGAATTCAGCAAACA+GGG | 0.575011 | 1.4:-74798662 | MS.gene33972:CDS |
| TCAAATGCCTTCAGTGCAGA+CGG | 0.577765 | 1.4:+74796056 | None:intergenic |
| ACTGCTGTTGGGTTTGCTCG+GGG | 0.578511 | 1.4:-74797281 | MS.gene33972:CDS |
| GGGAAGATAGAGGAAAGAGA+AGG | 0.581551 | 1.4:+74799050 | None:intergenic |
| TTTGTGAAAATGGTTATAAG+GGG | 0.582953 | 1.4:+74798244 | None:intergenic |
| CAAACAGGGTCCACTCCACA+TGG | 0.587054 | 1.4:-74798648 | MS.gene33972:CDS |
| GCAAGAACTTGGTAGCAGCT+GGG | 0.602600 | 1.4:+74796714 | None:intergenic |
| CAAGCTATTGAGAAATGGGA+TGG | 0.608067 | 1.4:-74796689 | MS.gene33972:CDS |
| GTTTCAAAGGACAATGCCAA+TGG | 0.609689 | 1.4:-74798269 | MS.gene33972:CDS |
| AAGGTTGTCTCCATGTGGAG+TGG | 0.617242 | 1.4:+74798638 | None:intergenic |
| AGAAAGTCAGGATCTTGCAC+AGG | 0.618105 | 1.4:-74796666 | MS.gene33972:intron |
| TCTCAGGAGCAAGTCAGAAG+TGG | 0.630125 | 1.4:-74796797 | MS.gene33972:intron |
| AACCAGGCTATGTCACAGCA+TGG | 0.630192 | 1.4:-74796118 | MS.gene33972:CDS |
| GAATCGAAGATGAAGATGAG+TGG | 0.647123 | 1.4:-74799110 | None:intergenic |
| GAATGAGCATGGTGATGAAG+TGG | 0.647716 | 1.4:+74798974 | None:intergenic |
| GAACTTGTTGGAATGACGAA+AGG | 0.650620 | 1.4:-74795972 | MS.gene33972:CDS |
| CTCAGGGAATGACTTTACAG+TGG | 0.658371 | 1.4:-74797476 | MS.gene33972:intron |
| GTATCAAGGTTGTCTCCATG+TGG | 0.667949 | 1.4:+74798633 | None:intergenic |
| ACCTTGATACAGTCAAGAGT+AGG | 0.669920 | 1.4:-74798620 | MS.gene33972:CDS |
| AAAGCTGTGAATATTCAACC+AGG | 0.675945 | 1.4:-74796134 | MS.gene33972:CDS |
| TTGGTGCAGTGATGTTGCGG+AGG | 0.713741 | 1.4:-74796745 | MS.gene33972:CDS |
| CAGAAAGGTCAAGCTCTCTG+CGG | 0.715909 | 1.4:+74797224 | None:intergenic |
| TGTTTCATATGCAAGTGACT+CGG | 0.725351 | 1.4:-74797371 | MS.gene33972:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAGTAAAATAAGTTATATA+TGG | - | chr1.4:74798419-74798438 | MS.gene33972:intron | 15.0% |
| !! | TAAGTTATATATGGTTAATT+TGG | - | chr1.4:74798428-74798447 | MS.gene33972:intron | 15.0% |
| !!! | AGCTGTAATATTTTAATAAA+AGG | + | chr1.4:74796104-74796123 | None:intergenic | 15.0% |
| !!! | CATTTACTTTTTTGAAATTA+TGG | - | chr1.4:74797452-74797471 | MS.gene33972:CDS | 15.0% |
| !!! | GCTGTAATATTTTAATAAAA+GGG | + | chr1.4:74796103-74796122 | None:intergenic | 15.0% |
| !!! | TCTTTATATTTTCTTAATCT+TGG | + | chr1.4:74797075-74797094 | None:intergenic | 15.0% |
| !! | AAAGAGTTTCGAAAATTAAA+GGG | + | chr1.4:74797313-74797332 | None:intergenic | 20.0% |
| !! | AAATTAGATTTAAACGATCT+CGG | + | chr1.4:74798006-74798025 | None:intergenic | 20.0% |
| !! | AATCCAAATCCATTAAATTT+AGG | + | chr1.4:74797924-74797943 | None:intergenic | 20.0% |
| !! | ACATCAATGATATTATTAAG+TGG | + | chr1.4:74796505-74796524 | None:intergenic | 20.0% |
| !! | ATATATCTCGATCATTATAT+CGG | + | chr1.4:74797029-74797048 | None:intergenic | 20.0% |
| !! | ATCCAAATCCATTAAATTTA+GGG | + | chr1.4:74797923-74797942 | None:intergenic | 20.0% |
| !! | CAGAAAGAGAATATTAAAAA+AGG | + | chr1.4:74797542-74797561 | None:intergenic | 20.0% |
| !! | GTTTATCAAGATAAAACTAA+CGG | + | chr1.4:74796991-74797010 | None:intergenic | 20.0% |
| !! | TAAAGAGTTTCGAAAATTAA+AGG | + | chr1.4:74797314-74797333 | None:intergenic | 20.0% |
| !! | TACAGTAAACATGTAAAATT+TGG | + | chr1.4:74798126-74798145 | None:intergenic | 20.0% |
| !! | TTTATCAAGATAAAACTAAC+GGG | + | chr1.4:74796990-74797009 | None:intergenic | 20.0% |
| !!! | ATTTACTTTTCCAAATTACT+AGG | - | chr1.4:74797156-74797175 | MS.gene33972:intron | 20.0% |
| !!! | CTTTTTTAATATTCTCTTTC+TGG | - | chr1.4:74797540-74797559 | MS.gene33972:intron | 20.0% |
| !!! | TTTTGTGAAAATGGTTATAA+GGG | + | chr1.4:74796802-74796821 | None:intergenic | 20.0% |
| ! | AAAATTGAAAGAACGAAAAC+AGG | + | chr1.4:74796846-74796865 | None:intergenic | 25.0% |
| ! | AAATTGAAAGAACGAAAACA+GGG | + | chr1.4:74796845-74796864 | None:intergenic | 25.0% |
| ! | AGATTAGACCCTAAATTTAA+TGG | - | chr1.4:74797912-74797931 | MS.gene33972:intron | 25.0% |
| ! | ATGTGATTAACCTAGTAATT+TGG | + | chr1.4:74797169-74797188 | None:intergenic | 25.0% |
| ! | CTATTTACCTAACAAAACTA+AGG | - | chr1.4:74796530-74796549 | MS.gene33972:intron | 25.0% |
| ! | GTTCAAGACAAAACTAATAT+TGG | + | chr1.4:74796658-74796677 | None:intergenic | 25.0% |
| ! | TTATGAATGAAGTTCATGTT+TGG | + | chr1.4:74796633-74796652 | None:intergenic | 25.0% |
| ! | TTTGTGAAAATGGTTATAAG+GGG | + | chr1.4:74796801-74796820 | None:intergenic | 25.0% |
| !! | AACCTATATTGATTGATTTC+AGG | + | chr1.4:74798822-74798841 | None:intergenic | 25.0% |
| !! | ATTTACTTTGGATTGGAAAT+AGG | - | chr1.4:74798452-74798471 | MS.gene33972:intron | 25.0% |
| !! | ATTTGGAATTTACTTTGGAT+TGG | - | chr1.4:74798445-74798464 | MS.gene33972:intron | 25.0% |
| !! | CATAAACAATTCTGAACTTT+TGG | + | chr1.4:74797491-74797510 | None:intergenic | 25.0% |
| !! | GGTTAATTTGGAATTTACTT+TGG | - | chr1.4:74798440-74798459 | MS.gene33972:intron | 25.0% |
| !! | GTTTTGTGAAAATGGTTATA+AGG | + | chr1.4:74796803-74796822 | None:intergenic | 25.0% |
| !!! | CATATTTTGGTGATGTATTA+CGG | + | chr1.4:74798483-74798502 | None:intergenic | 25.0% |
| !!! | GAAAAATGAAACTTGTTGTA+AGG | - | chr1.4:74796921-74796940 | MS.gene33972:intron | 25.0% |
| !!! | TGTATGATTCTGTTTTTATC+TGG | - | chr1.4:74798142-74798161 | MS.gene33972:intron | 25.0% |
| AAACATGTAAAATTTGGACC+CGG | + | chr1.4:74798120-74798139 | None:intergenic | 30.0% | |
| AAATTAGTAGCCAGAAATCA+AGG | + | chr1.4:74796716-74796735 | None:intergenic | 30.0% | |
| AACACAAATCACTACTCAAT+TGG | + | chr1.4:74796219-74796238 | None:intergenic | 30.0% | |
| ACAATGGAAGAAAATGAGAA+AGG | + | chr1.4:74798226-74798245 | None:intergenic | 30.0% | |
| ACACAAATCACTACTCAATT+GGG | + | chr1.4:74796218-74796237 | None:intergenic | 30.0% | |
| ACCAAAATATGATACACCAT+AGG | - | chr1.4:74798492-74798511 | MS.gene33972:intron | 30.0% | |
| AGTAATACAAATGACACTAC+AGG | + | chr1.4:74797865-74797884 | None:intergenic | 30.0% | |
| ATAAAACAGCTAATTCCAAG+TGG | + | chr1.4:74798193-74798212 | None:intergenic | 30.0% | |
| ATAAATGAGATGTATCAGGT+TGG | - | chr1.4:74797699-74797718 | MS.gene33972:intron | 30.0% | |
| GAAGATAAATGAGATGTATC+AGG | - | chr1.4:74797695-74797714 | MS.gene33972:intron | 30.0% | |
| TAAATGAGATGTATCAGGTT+GGG | - | chr1.4:74797700-74797719 | MS.gene33972:intron | 30.0% | |
| TAACAAAACTAAGGCATGTT+CGG | - | chr1.4:74796539-74796558 | MS.gene33972:intron | 30.0% | |
| TAATCTGAATTGTCTGATCT+CGG | - | chr1.4:74798036-74798055 | MS.gene33972:intron | 30.0% | |
| TACAACTACTAGTGTTTGAA+CGG | + | chr1.4:74798737-74798756 | None:intergenic | 30.0% | |
| TACAGAAAGATTAAAGCCTT+GGG | - | chr1.4:74796364-74796383 | MS.gene33972:intron | 30.0% | |
| TACTAGGTTAATCACATAAG+TGG | - | chr1.4:74797172-74797191 | MS.gene33972:intron | 30.0% | |
| TATAAAGAAAAGTGATCACG+AGG | - | chr1.4:74797087-74797106 | MS.gene33972:intron | 30.0% | |
| TGCCTGAAATCAATCAATAT+AGG | - | chr1.4:74798817-74798836 | MS.gene33972:intron | 30.0% | |
| TTACAGAAAGATTAAAGCCT+TGG | - | chr1.4:74796363-74796382 | MS.gene33972:intron | 30.0% | |
| TTAGAAGAGATAAGAGTAGA+GGG | + | chr1.4:74796043-74796062 | None:intergenic | 30.0% | |
| TTGTACAATTCTACCATCAT+TGG | - | chr1.4:74798752-74798771 | MS.gene33972:intron | 30.0% | |
| TTTAGAAGAGATAAGAGTAG+AGG | + | chr1.4:74796044-74796063 | None:intergenic | 30.0% | |
| ! | AATTGAGTAGTGATTTGTGT+TGG | - | chr1.4:74796218-74796237 | MS.gene33972:intron | 30.0% |
| ! | ACCTATGGTGTATCATATTT+TGG | + | chr1.4:74798496-74798515 | None:intergenic | 30.0% |
| ! | TGCATGTTGATTGTTTAACT+TGG | - | chr1.4:74796332-74796351 | MS.gene33972:intron | 30.0% |
| !! | GACCCTAAATTTAATGGATT+TGG | - | chr1.4:74797918-74797937 | MS.gene33972:intron | 30.0% |
| !! | GTTTATTATTGACTCCATGA+AGG | + | chr1.4:74797356-74797375 | None:intergenic | 30.0% |
| !!! | AGTTTTGTTACCTTCTTAGA+GGG | - | chr1.4:74796279-74796298 | MS.gene33972:intron | 30.0% |
| !!! | TAGTTTTGTTACCTTCTTAG+AGG | - | chr1.4:74796278-74796297 | MS.gene33972:intron | 30.0% |
| AAAAGGTAATGACTCAAGTG+TGG | + | chr1.4:74797525-74797544 | None:intergenic | 35.0% | |
| AAAGAGAAGGAGAAGAGTAA+GGG | + | chr1.4:74795982-74796001 | None:intergenic | 35.0% | |
| AAAGCTGTGAATATTCAACC+AGG | - | chr1.4:74798908-74798927 | MS.gene33972:intron | 35.0% | |
| AACAGGGAATTACTTACTCT+CGG | + | chr1.4:74796829-74796848 | None:intergenic | 35.0% | |
| AATAGCTTGAAGCAAGAACT+TGG | + | chr1.4:74798342-74798361 | None:intergenic | 35.0% | |
| AATCTTGGCAGAATAGTCAA+TGG | + | chr1.4:74797060-74797079 | None:intergenic | 35.0% | |
| ACAATTCTACCATCATTGGT+CGG | - | chr1.4:74798756-74798775 | MS.gene33972:intron | 35.0% | |
| ATATAGGTTTACAACGCTCT+TGG | - | chr1.4:74798833-74798852 | MS.gene33972:intron | 35.0% | |
| ATATCAAAACCGACCAATGA+TGG | + | chr1.4:74798768-74798787 | None:intergenic | 35.0% | |
| ATATCGGTACATTGTTTCAG+AGG | + | chr1.4:74797013-74797032 | None:intergenic | 35.0% | |
| ATCCTAACAACAAGATTGCA+CGG | - | chr1.4:74799026-74799045 | MS.gene33972:CDS | 35.0% | |
| ATGTTCACAACCTTGATTTC+TGG | - | chr1.4:74796703-74796722 | MS.gene33972:CDS | 35.0% | |
| ATTCTCTTTCTGGATTCTCA+GGG | - | chr1.4:74797550-74797569 | MS.gene33972:intron | 35.0% | |
| ATTGGAGAAAGTCATCCAAA+TGG | - | chr1.4:74797601-74797620 | MS.gene33972:intron | 35.0% | |
| CAGTGGAAAATCTTCAAGAT+TGG | - | chr1.4:74797583-74797602 | MS.gene33972:intron | 35.0% | |
| GACATGAAATGAAAACAACC+TGG | + | chr1.4:74796456-74796475 | None:intergenic | 35.0% | |
| GCAGTAGCAAGTATATTAGT+TGG | + | chr1.4:74797746-74797765 | None:intergenic | 35.0% | |
| GCTTCAAGCTATTGAGAAAT+GGG | - | chr1.4:74798349-74798368 | MS.gene33972:intron | 35.0% | |
| GGTAATTACTTGAATGAGCA+TGG | + | chr1.4:74796082-74796101 | None:intergenic | 35.0% | |
| GTTTCTCTTGAACACATAGA+AGG | - | chr1.4:74797889-74797908 | MS.gene33972:intron | 35.0% | |
| TAATATCAAGATCACGAGTG+AGG | - | chr1.4:74797276-74797295 | MS.gene33972:CDS | 35.0% | |
| TATTCTCTTTCTGGATTCTC+AGG | - | chr1.4:74797549-74797568 | MS.gene33972:intron | 35.0% | |
| TCACTTGCATATGAAACATC+AGG | + | chr1.4:74797669-74797688 | None:intergenic | 35.0% | |
| TGCTTCAAGCTATTGAGAAA+TGG | - | chr1.4:74798348-74798367 | MS.gene33972:intron | 35.0% | |
| TGTTTCATATGCAAGTGACT+CGG | - | chr1.4:74797671-74797690 | MS.gene33972:intron | 35.0% | |
| TTATATTGCCCATTCATCTC+AGG | + | chr1.4:74797394-74797413 | None:intergenic | 35.0% | |
| TTGGAGAAAGTCATCCAAAT+GGG | - | chr1.4:74797602-74797621 | MS.gene33972:intron | 35.0% | |
| TTTGCATACCATGAGTGAAT+TGG | - | chr1.4:74796882-74796901 | MS.gene33972:intron | 35.0% | |
| ! | AAATGAGATGTATCAGGTTG+GGG | - | chr1.4:74797701-74797720 | MS.gene33972:intron | 35.0% |
| ! | AACAAACAAACCCTCTAAGA+AGG | + | chr1.4:74796292-74796311 | None:intergenic | 35.0% |
| ! | AATATACTTGCTACTGCTGT+TGG | - | chr1.4:74797749-74797768 | MS.gene33972:intron | 35.0% |
| ! | ATATACTTGCTACTGCTGTT+GGG | - | chr1.4:74797750-74797769 | MS.gene33972:intron | 35.0% |
| ! | GAAGTTCATGTTTGGAATCA+CGG | + | chr1.4:74796625-74796644 | None:intergenic | 35.0% |
| ! | GATTCTTTGAAGGAACTTGT+TGG | - | chr1.4:74799058-74799077 | MS.gene33972:CDS | 35.0% |
| ! | GTGATTTGTGTTGGAATGTT+TGG | - | chr1.4:74796227-74796246 | MS.gene33972:intron | 35.0% |
| ! | TCATTTTCTTCCATTGTCTC+AGG | - | chr1.4:74798229-74798248 | MS.gene33972:intron | 35.0% |
| ! | TCCTGATATCATGTTTTCCA+GGG | - | chr1.4:74796962-74796981 | MS.gene33972:intron | 35.0% |
| ! | TTCCTGATATCATGTTTTCC+AGG | - | chr1.4:74796961-74796980 | MS.gene33972:intron | 35.0% |
| !! | AAGGTGTTACTGTCAGATAT+AGG | - | chr1.4:74799089-74799108 | MS.gene33972:CDS | 35.0% |
| !! | AGGTGTTACTGTCAGATATA+GGG | - | chr1.4:74799090-74799109 | MS.gene33972:CDS | 35.0% |
| !! | CTCGGATTGTTTTGTGAAAA+TGG | + | chr1.4:74796811-74796830 | None:intergenic | 35.0% |
| !!! | GAACATGCCTTAGTTTTGTT+AGG | + | chr1.4:74796540-74796559 | None:intergenic | 35.0% |
| AAAGTGATCACGAGGTTTGT+AGG | - | chr1.4:74797095-74797114 | MS.gene33972:intron | 40.0% | |
| AAGTGATCACGAGGTTTGTA+GGG | - | chr1.4:74797096-74797115 | MS.gene33972:intron | 40.0% | |
| ACATGACACCAATTCACTCA+TGG | + | chr1.4:74796893-74796912 | None:intergenic | 40.0% | |
| ACCTTGATACAGTCAAGAGT+AGG | - | chr1.4:74796422-74796441 | MS.gene33972:intron | 40.0% | |
| AGTGGATATAGACTATGTGC+AGG | - | chr1.4:74797190-74797209 | MS.gene33972:intron | 40.0% | |
| AGTGTTTGAACGGTTGCAAA+GGG | + | chr1.4:74798727-74798746 | None:intergenic | 40.0% | |
| AGTTATAACTGTAGGCGATC+CGG | - | chr1.4:74798098-74798117 | MS.gene33972:intron | 40.0% | |
| ATGCTTTGATGCAACCTTCA+TGG | - | chr1.4:74797339-74797358 | MS.gene33972:CDS | 40.0% | |
| ATGGTTATAAGGGGTTCCAT+TGG | + | chr1.4:74796792-74796811 | None:intergenic | 40.0% | |
| CAAGCTATTGAGAAATGGGA+TGG | - | chr1.4:74798353-74798372 | MS.gene33972:intron | 40.0% | |
| CATAGGTGCCAAATGTACAT+CGG | - | chr1.4:74798509-74798528 | MS.gene33972:intron | 40.0% | |
| CTGTCTTCGTCAATGATAGA+AGG | + | chr1.4:74796751-74796770 | None:intergenic | 40.0% | |
| CTGTGTGGAGTTATAACTGT+AGG | - | chr1.4:74798090-74798109 | MS.gene33972:intron | 40.0% | |
| CTTGCAACTCTTTAGCAGAA+AGG | + | chr1.4:74797836-74797855 | None:intergenic | 40.0% | |
| GAAAGAGAAGGAGAAGAGTA+AGG | + | chr1.4:74795983-74796002 | None:intergenic | 40.0% | |
| GACGAAGACAGATGTTTCAA+AGG | - | chr1.4:74796760-74796779 | MS.gene33972:CDS | 40.0% | |
| GTAAGGGAAATGAGTGAAAG+TGG | + | chr1.4:74795966-74795985 | None:intergenic | 40.0% | |
| GTGACAAACCGATGTACATT+TGG | + | chr1.4:74798520-74798539 | None:intergenic | 40.0% | |
| GTTTACTGCATGAAACTGTG+TGG | - | chr1.4:74798075-74798094 | MS.gene33972:intron | 40.0% | |
| GTTTCAAAGGACAATGCCAA+TGG | - | chr1.4:74796773-74796792 | MS.gene33972:CDS | 40.0% | |
| TAGTGTTTGAACGGTTGCAA+AGG | + | chr1.4:74798728-74798747 | None:intergenic | 40.0% | |
| TCCCTGGAAAACATGATATC+AGG | + | chr1.4:74796966-74796985 | None:intergenic | 40.0% | |
| TCCTACTCTTGACTGTATCA+AGG | + | chr1.4:74796426-74796445 | None:intergenic | 40.0% | |
| TCCTTCAAAGAATCTCTCCT+GGG | + | chr1.4:74799052-74799071 | None:intergenic | 40.0% | |
| TGACATATACACAAGCCACT+TGG | - | chr1.4:74798175-74798194 | MS.gene33972:intron | 40.0% | |
| TGTTGAGACCTGAGATGAAT+GGG | - | chr1.4:74797383-74797402 | MS.gene33972:CDS | 40.0% | |
| TTCCTTCAAAGAATCTCTCC+TGG | + | chr1.4:74799053-74799072 | None:intergenic | 40.0% | |
| ! | AAAGTCATCCAAATGGGCTT+CGG | - | chr1.4:74797608-74797627 | MS.gene33972:intron | 40.0% |
| ! | AAGAGGTTGAAAGGTGGATT+TGG | + | chr1.4:74796020-74796039 | None:intergenic | 40.0% |
| ! | AGTGGCTTGTGTATATGTCA+TGG | + | chr1.4:74798175-74798194 | None:intergenic | 40.0% |
| ! | GTTGAAAGGTGGATTTGGAA+GGG | + | chr1.4:74796015-74796034 | None:intergenic | 40.0% |
| !! | GAACTTGTTGGAATGACGAA+AGG | - | chr1.4:74799070-74799089 | MS.gene33972:CDS | 40.0% |
| !! | GTGAGTTTTTGGGAGAATCA+TGG | - | chr1.4:74796569-74796588 | MS.gene33972:intron | 40.0% |
| AGAAAGTCAGGATCTTGCAC+AGG | - | chr1.4:74798376-74798395 | MS.gene33972:intron | 45.0% | |
| AGAATATCCGTCTGCACTGA+AGG | - | chr1.4:74798979-74798998 | MS.gene33972:CDS | 45.0% | |
| AGTAGAGGGAAGAGGTTGAA+AGG | + | chr1.4:74796029-74796048 | None:intergenic | 45.0% | |
| CAAGAGTAGGATTCTACTCC+AGG | - | chr1.4:74796435-74796454 | MS.gene33972:intron | 45.0% | |
| CCTTGGGAATTCAGCAAACA+GGG | - | chr1.4:74796380-74796399 | MS.gene33972:intron | 45.0% | |
| CGATGTACATTTGGCACCTA+TGG | + | chr1.4:74798511-74798530 | None:intergenic | 45.0% | |
| CTAAGGCATGTTCGGATTGA+CGG | - | chr1.4:74796547-74796566 | MS.gene33972:intron | 45.0% | |
| CTCAGGGAATGACTTTACAG+TGG | - | chr1.4:74797566-74797585 | MS.gene33972:intron | 45.0% | |
| GAAATGGGATGGAGAAAGTC+AGG | - | chr1.4:74798364-74798383 | MS.gene33972:intron | 45.0% | |
| GAGATAAGAGTAGAGGGAAG+AGG | + | chr1.4:74796037-74796056 | None:intergenic | 45.0% | |
| GGATTTGGAAGGGAAGATAG+AGG | + | chr1.4:74796005-74796024 | None:intergenic | 45.0% | |
| GGGAAGATAGAGGAAAGAGA+AGG | + | chr1.4:74795995-74796014 | None:intergenic | 45.0% | |
| GGTTTGTAGGGATGAACTAC+TGG | - | chr1.4:74797108-74797127 | MS.gene33972:intron | 45.0% | |
| GTATCAAGGTTGTCTCCATG+TGG | + | chr1.4:74796412-74796431 | None:intergenic | 45.0% | |
| GTCACAGCATGGAACAATCT+TGG | - | chr1.4:74798935-74798954 | MS.gene33972:intron | 45.0% | |
| GTGTCAGTTATGTTCGCGAT+GGG | - | chr1.4:74798855-74798874 | MS.gene33972:intron | 45.0% | |
| GTGTTGAGACCTGAGATGAA+TGG | - | chr1.4:74797382-74797401 | MS.gene33972:CDS | 45.0% | |
| GTTATAACTGTAGGCGATCC+GGG | - | chr1.4:74798099-74798118 | MS.gene33972:intron | 45.0% | |
| TCAAATGCCTTCAGTGCAGA+CGG | + | chr1.4:74798989-74799008 | None:intergenic | 45.0% | |
| TTCATCTCAGGTCTCAACAC+AGG | + | chr1.4:74797382-74797401 | None:intergenic | 45.0% | |
| ! | CGGATTGACGGTGAGTTTTT+GGG | - | chr1.4:74796559-74796578 | MS.gene33972:intron | 45.0% |
| ! | GAATGAGCATGGTGATGAAG+TGG | + | chr1.4:74796071-74796090 | None:intergenic | 45.0% |
| ! | GGTTGAAAGGTGGATTTGGA+AGG | + | chr1.4:74796016-74796035 | None:intergenic | 45.0% |
| ! | GTTGGGGAGTTGTTTGACTT+AGG | - | chr1.4:74797717-74797736 | MS.gene33972:intron | 45.0% |
| ! | TCGGATTGACGGTGAGTTTT+TGG | - | chr1.4:74796558-74796577 | MS.gene33972:intron | 45.0% |
| !! | AACTTGGTGCAGTGATGTTG+CGG | - | chr1.4:74798294-74798313 | MS.gene33972:intron | 45.0% |
| !!! | AAATTAATTAATATTTTATC+TGG | - | chr1.4:74797223-74797242 | MS.gene33972:CDS | 5.0% |
| AACCAGGCTATGTCACAGCA+TGG | - | chr1.4:74798924-74798943 | MS.gene33972:intron | 50.0% | |
| AAGGTTGTCTCCATGTGGAG+TGG | + | chr1.4:74796407-74796426 | None:intergenic | 50.0% | |
| AGAGGGAAGAGGTTGAAAGG+TGG | + | chr1.4:74796026-74796045 | None:intergenic | 50.0% | |
| CAAGAATGCCGAAGCCCATT+TGG | + | chr1.4:74797619-74797638 | None:intergenic | 50.0% | |
| CAGAAAGGTCAAGCTCTCTG+CGG | + | chr1.4:74797821-74797840 | None:intergenic | 50.0% | |
| CGCGATGGGAAGCTTGAAAA+AGG | - | chr1.4:74798869-74798888 | MS.gene33972:intron | 50.0% | |
| GCCCAGGAGAGATTCTTTGA+AGG | - | chr1.4:74799048-74799067 | MS.gene33972:CDS | 50.0% | |
| GCCTTGGGAATTCAGCAAAC+AGG | - | chr1.4:74796379-74796398 | MS.gene33972:intron | 50.0% | |
| GCGACTGAGCTGTTTGAACT+TGG | - | chr1.4:74798278-74798297 | MS.gene33972:intron | 50.0% | |
| GGTGTCAGTTATGTTCGCGA+TGG | - | chr1.4:74798854-74798873 | MS.gene33972:intron | 50.0% | |
| GTCAGGATCTTGCACAGGTT+AGG | - | chr1.4:74798381-74798400 | MS.gene33972:intron | 50.0% | |
| TCTCAGGAGCAAGTCAGAAG+TGG | - | chr1.4:74798245-74798264 | MS.gene33972:CDS | 50.0% | |
| TTCCATGCTGTGACATAGCC+TGG | + | chr1.4:74798929-74798948 | None:intergenic | 50.0% | |
| ! | ACGGTGAGTTTGACTGACTC+CGG | + | chr1.4:74796606-74796625 | None:intergenic | 50.0% |
| ! | AGCAAGAACTTGGTAGCAGC+TGG | + | chr1.4:74798332-74798351 | None:intergenic | 50.0% |
| ! | CCCTGTTTGCTGAATTCCCA+AGG | + | chr1.4:74796383-74796402 | None:intergenic | 50.0% |
| ! | CTACTGCTGTTGGGTTTGCT+CGG | - | chr1.4:74797759-74797778 | MS.gene33972:intron | 50.0% |
| ! | GCAAGAACTTGGTAGCAGCT+GGG | + | chr1.4:74798331-74798350 | None:intergenic | 50.0% |
| ! | TACTGCTGTTGGGTTTGCTC+GGG | - | chr1.4:74797760-74797779 | MS.gene33972:intron | 50.0% |
| !! | CTGACTTGCTCCTGAGACAA+TGG | + | chr1.4:74798242-74798261 | None:intergenic | 50.0% |
| !! | GATAAAACTAACGGGCTCCC+TGG | + | chr1.4:74796982-74797001 | None:intergenic | 50.0% |
| !! | GGCCGTGCAATCTTGTTGTT+AGG | + | chr1.4:74799031-74799050 | None:intergenic | 50.0% |
| ACAACAAGATTGCACGGCCC+AGG | - | chr1.4:74799032-74799051 | MS.gene33972:CDS | 55.0% | |
| CAAACAGGGTCCACTCCACA+TGG | - | chr1.4:74796394-74796413 | MS.gene33972:intron | 55.0% | |
| GCTCTCTGCGGACAAGAACT+TGG | + | chr1.4:74797809-74797828 | None:intergenic | 55.0% | |
| TTGGTGCAGTGATGTTGCGG+AGG | - | chr1.4:74798297-74798316 | MS.gene33972:intron | 55.0% | |
| ! | ACTGCTGTTGGGTTTGCTCG+GGG | - | chr1.4:74797761-74797780 | MS.gene33972:intron | 55.0% |
| ! | GTGAGTTTGACTGACTCCGG+TGG | + | chr1.4:74796603-74796622 | None:intergenic | 55.0% |
| !! | AATCATGGTGCCACTGCCAC+CGG | - | chr1.4:74796584-74796603 | MS.gene33972:intron | 55.0% |
| ! | TGTTGGGTTTGCTCGGGGCT+GGG | - | chr1.4:74797766-74797785 | MS.gene33972:intron | 60.0% |
| ! | TTGACTGACTCCGGTGGCAG+TGG | + | chr1.4:74796597-74796616 | None:intergenic | 60.0% |
| ! | CTGTTGGGTTTGCTCGGGGC+TGG | - | chr1.4:74797765-74797784 | MS.gene33972:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 74795941 | 74799123 | 74795941 | ID=MS.gene33972 |
| chr1.4 | mRNA | 74795941 | 74799123 | 74795941 | ID=MS.gene33972.t1;Parent=MS.gene33972 |
| chr1.4 | exon | 74798972 | 74799123 | 74798972 | ID=MS.gene33972.t1.exon1;Parent=MS.gene33972.t1 |
| chr1.4 | CDS | 74798972 | 74799123 | 74798972 | ID=cds.MS.gene33972.t1;Parent=MS.gene33972.t1 |
| chr1.4 | exon | 74798608 | 74798695 | 74798608 | ID=MS.gene33972.t1.exon2;Parent=MS.gene33972.t1 |
| chr1.4 | CDS | 74798608 | 74798695 | 74798608 | ID=cds.MS.gene33972.t1;Parent=MS.gene33972.t1 |
| chr1.4 | exon | 74798233 | 74798293 | 74798233 | ID=MS.gene33972.t1.exon3;Parent=MS.gene33972.t1 |
| chr1.4 | CDS | 74798233 | 74798293 | 74798233 | ID=cds.MS.gene33972.t1;Parent=MS.gene33972.t1 |
| chr1.4 | exon | 74797210 | 74797493 | 74797210 | ID=MS.gene33972.t1.exon4;Parent=MS.gene33972.t1 |
| chr1.4 | CDS | 74797210 | 74797493 | 74797210 | ID=cds.MS.gene33972.t1;Parent=MS.gene33972.t1 |
| chr1.4 | exon | 74796667 | 74796813 | 74796667 | ID=MS.gene33972.t1.exon5;Parent=MS.gene33972.t1 |
| chr1.4 | CDS | 74796667 | 74796813 | 74796667 | ID=cds.MS.gene33972.t1;Parent=MS.gene33972.t1 |
| chr1.4 | exon | 74795941 | 74796225 | 74795941 | ID=MS.gene33972.t1.exon6;Parent=MS.gene33972.t1 |
| chr1.4 | CDS | 74795941 | 74796225 | 74795941 | ID=cds.MS.gene33972.t1;Parent=MS.gene33972.t1 |
| Gene Sequence |
| Protein sequence |
