Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065734.t1 | XP_013467963.1 | 94.8 | 191 | 10 | 0 | 1 | 191 | 1 | 191 | 3.60E-96 | 360.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065734.t1 | I3SI25 | 94.8 | 191 | 10 | 0 | 1 | 191 | 1 | 191 | 2.6e-96 | 360.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene065734 | 0.873363 | 1.56E-67 | -1.69E-46 |
| MS.gene049171 | MS.gene065734 | 0.86852 | 6.14E-66 | -1.69E-46 |
| MS.gene049173 | MS.gene065734 | 0.833661 | 4.69E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene065734 | 0.85291 | 3.39E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene065734 | 0.869981 | 2.06E-66 | -1.69E-46 |
| MS.gene049232 | MS.gene065734 | 0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene065734 | 0.872506 | 3.02E-67 | -1.69E-46 |
| MS.gene049320 | MS.gene065734 | 0.880839 | 3.94E-70 | -1.69E-46 |
| MS.gene04939 | MS.gene065734 | 0.832157 | 1.11E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene065734 | 0.831265 | 1.84E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene065734 | 0.864874 | 8.88E-65 | -1.69E-46 |
| MS.gene049615 | MS.gene065734 | 0.835752 | 1.40E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene065734 | 0.821565 | 3.77E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene065734 | 0.873461 | 1.44E-67 | -1.69E-46 |
| MS.gene05010 | MS.gene065734 | 0.819469 | 1.14E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene065734 | 0.874791 | 5.13E-68 | -1.69E-46 |
| MS.gene050165 | MS.gene065734 | 0.864451 | 1.21E-64 | -1.69E-46 |
| MS.gene050323 | MS.gene065734 | 0.807297 | 5.42E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene065734 | 0.847443 | 1.15E-59 | -1.69E-46 |
| MS.gene050444 | MS.gene065734 | 0.817777 | 2.77E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene065734 | 0.863237 | 2.87E-64 | -1.69E-46 |
| MS.gene050507 | MS.gene065734 | 0.807023 | 6.19E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene065734 | 0.859298 | 4.55E-63 | -1.69E-46 |
| MS.gene050538 | MS.gene065734 | 0.834967 | 2.21E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene065734 | 0.860501 | 1.98E-63 | -1.69E-46 |
| MS.gene050593 | MS.gene065734 | 0.806291 | 8.83E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene065734 | 0.864162 | 1.48E-64 | -1.69E-46 |
| MS.gene050675 | MS.gene065734 | 0.833427 | 5.37E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene065734 | 0.870428 | 1.47E-66 | -1.69E-46 |
| MS.gene050747 | MS.gene065734 | 0.850475 | 1.66E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene065734 | 0.866806 | 2.18E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene065734 | 0.839795 | 1.28E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene065734 | 0.802689 | 4.98E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene065734 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene065734 | 0.812177 | 4.83E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene065734 | 0.80119 | 1.01E-48 | -1.69E-46 |
| MS.gene050950 | MS.gene065734 | 0.837402 | 5.31E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene065734 | 0.855541 | 5.89E-62 | -1.69E-46 |
| MS.gene05100 | MS.gene065734 | 0.8572 | 1.92E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene065734 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene065734 | 0.806387 | 8.43E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene065734 | 0.842419 | 2.62E-58 | -1.69E-46 |
| MS.gene051551 | MS.gene065734 | 0.846476 | 2.12E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene065734 | 0.879087 | 1.66E-69 | -1.69E-46 |
| MS.gene051692 | MS.gene065734 | 0.822616 | 2.15E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene065734 | 0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene065734 | 0.849999 | 2.25E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene065734 | 0.826076 | 3.31E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene065734 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene065734 | 0.866722 | 2.32E-65 | -1.69E-46 |
| MS.gene052271 | MS.gene065734 | 0.814697 | 1.35E-51 | -1.69E-46 |
| MS.gene052322 | MS.gene065734 | 0.811771 | 5.93E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene065734 | 0.824037 | 1.00E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene065734 | 0.809399 | 1.93E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene065734 | 0.81096 | 8.89E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene065734 | 0.809226 | 2.10E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene065734 | 0.823481 | 1.35E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene065734 | 0.815007 | 1.15E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene065734 | 0.827946 | 1.18E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene065734 | 0.85055 | 1.58E-60 | -1.69E-46 |
| MS.gene052505 | MS.gene065734 | 0.816778 | 4.64E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene065734 | 0.803326 | 3.68E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene065734 | 0.864234 | 1.41E-64 | -1.69E-46 |
| MS.gene052822 | MS.gene065734 | 0.810455 | 1.14E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene065734 | 0.846725 | 1.81E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene065734 | 0.844263 | 8.42E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene065734 | 0.825034 | 5.84E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene065734 | 0.827648 | 1.39E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene065734 | 0.829774 | 4.26E-55 | -1.69E-46 |
| MS.gene053117 | MS.gene065734 | 0.808938 | 2.42E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene065734 | 0.823412 | 1.40E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene065734 | 0.855982 | 4.38E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene065734 | 0.878502 | 2.67E-69 | -1.69E-46 |
| MS.gene053286 | MS.gene065734 | 0.873891 | 1.03E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene065734 | 0.81407 | 1.86E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene065734 | 0.837262 | 5.76E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene065734 | 0.821198 | 4.59E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene065734 | 0.841382 | 4.91E-58 | -1.69E-46 |
| MS.gene053579 | MS.gene065734 | 0.808605 | 2.85E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene065734 | 0.891578 | 3.50E-74 | -1.69E-46 |
| MS.gene053824 | MS.gene065734 | 0.833062 | 6.62E-56 | -1.69E-46 |
| MS.gene053915 | MS.gene065734 | 0.821451 | 4.01E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene065734 | 0.863841 | 1.87E-64 | -1.69E-46 |
| MS.gene054408 | MS.gene065734 | 0.825247 | 5.20E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene065734 | 0.835643 | 1.49E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene065734 | 0.878253 | 3.26E-69 | -1.69E-46 |
| MS.gene054642 | MS.gene065734 | 0.881763 | 1.83E-70 | -1.69E-46 |
| MS.gene05470 | MS.gene065734 | 0.856015 | 4.28E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene065734 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene065734 | 0.856283 | 3.57E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene065734 | 0.824374 | 8.36E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene065734 | 0.834193 | 3.45E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene065734 | 0.812628 | 3.85E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene065734 | 0.840216 | 9.94E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene065734 | 0.878002 | 3.99E-69 | -1.69E-46 |
| MS.gene055397 | MS.gene065734 | 0.814512 | 1.48E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene065734 | 0.823211 | 1.57E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene065734 | 0.866767 | 2.24E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene065734 | 0.86302 | 3.35E-64 | -1.69E-46 |
| MS.gene055722 | MS.gene065734 | 0.816807 | 4.57E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene065734 | 0.850605 | 1.52E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene065734 | 0.819302 | 1.25E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene065734 | 0.836497 | 9.04E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene065734 | 0.834338 | 3.18E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene065734 | 0.82046 | 6.78E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene065734 | 0.855247 | 7.17E-62 | -1.69E-46 |
| MS.gene056083 | MS.gene065734 | 0.801826 | 7.50E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene065734 | 0.85486 | 9.29E-62 | -1.69E-46 |
| MS.gene056487 | MS.gene065734 | 0.825725 | 4.01E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene065734 | 0.849263 | 3.62E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene065734 | 0.825331 | 4.97E-54 | -1.69E-46 |
| MS.gene05664 | MS.gene065734 | 0.838294 | 3.13E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene065734 | 0.875653 | 2.60E-68 | -1.69E-46 |
| MS.gene05666 | MS.gene065734 | 0.808833 | 2.55E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene065734 | 0.833959 | 3.95E-56 | -1.69E-46 |
| MS.gene057048 | MS.gene065734 | 0.826495 | 2.63E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene065734 | 0.813483 | 2.50E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene065734 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene065734 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene065734 | 0.870896 | 1.03E-66 | -1.69E-46 |
| MS.gene057295 | MS.gene065734 | 0.818567 | 1.83E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene065734 | 0.80757 | 4.74E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene065734 | 0.804256 | 2.36E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene065734 | 0.857958 | 1.14E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene065734 | 0.857993 | 1.12E-62 | -1.69E-46 |
| MS.gene057734 | MS.gene065734 | 0.815768 | 7.81E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene065734 | 0.850239 | 1.93E-60 | -1.69E-46 |
| MS.gene057926 | MS.gene065734 | 0.806128 | 9.56E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene065734 | 0.866239 | 3.30E-65 | -1.69E-46 |
| MS.gene058334 | MS.gene065734 | -0.81379 | 2.14E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene065734 | 0.889822 | 1.72E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene065734 | 0.861624 | 9.00E-64 | -1.69E-46 |
| MS.gene058723 | MS.gene065734 | 0.846554 | 2.02E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene065734 | 0.845553 | 3.78E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene065734 | 0.882602 | 9.08E-71 | -1.69E-46 |
| MS.gene059022 | MS.gene065734 | 0.856755 | 2.60E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene065734 | 0.863665 | 2.12E-64 | -1.69E-46 |
| MS.gene05914 | MS.gene065734 | 0.806857 | 6.71E-50 | -1.69E-46 |
| MS.gene059229 | MS.gene065734 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene065734 | 0.838056 | 3.61E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene065734 | 0.813972 | 1.95E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene065734 | 0.823622 | 1.25E-53 | -1.69E-46 |
| MS.gene059526 | MS.gene065734 | -0.801156 | 1.03E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene065734 | 0.800915 | 1.15E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene065734 | 0.816245 | 6.11E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene065734 | 0.890613 | 8.41E-74 | -1.69E-46 |
| MS.gene059718 | MS.gene065734 | 0.875293 | 3.45E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene065734 | 0.829661 | 4.54E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene065734 | 0.805218 | 1.48E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene065734 | 0.840057 | 1.09E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene065734 | 0.812957 | 3.26E-51 | -1.69E-46 |
| MS.gene060341 | MS.gene065734 | 0.802888 | 4.53E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene065734 | 0.802671 | 5.02E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene065734 | 0.822522 | 2.27E-53 | -1.69E-46 |
| MS.gene060728 | MS.gene065734 | 0.808781 | 2.62E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene065734 | 0.869096 | 4.00E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene065734 | 0.847795 | 9.22E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene065734 | 0.806372 | 8.49E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene065734 | 0.846831 | 1.70E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene065734 | 0.867628 | 1.19E-65 | -1.69E-46 |
| MS.gene060982 | MS.gene065734 | 0.84637 | 2.27E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene065734 | 0.807557 | 4.77E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene065734 | 0.868917 | 4.57E-66 | -1.69E-46 |
| MS.gene061200 | MS.gene065734 | 0.828826 | 7.24E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065734.t1 | MTR_1g059660 | 94.764 | 191 | 10 | 0 | 1 | 191 | 1 | 191 | 5.77e-133 | 370 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065734.t1 | AT2G36145 | 62.838 | 148 | 49 | 3 | 47 | 191 | 41 | 185 | 3.23e-57 | 178 |
Find 74 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGATTCCCTGCTCTTTC+AGG | 0.177129 | 1.2:+46040088 | MS.gene065734:CDS |
| CATAAGGCTCCTCATGATTC+TGG | 0.186944 | 1.2:-46042661 | None:intergenic |
| GTAGCTTCCCGCGGAAGCTT+TGG | 0.275230 | 1.2:-46039997 | None:intergenic |
| TAGCTTCCCGCGGAAGCTTT+GGG | 0.303187 | 1.2:-46039996 | None:intergenic |
| TGTCTGGTCGCTTGGAAAAC+TGG | 0.306117 | 1.2:-46042603 | None:intergenic |
| ATCTTTCATGCGCCCATGTC+TGG | 0.333077 | 1.2:-46042619 | None:intergenic |
| TACCCGGTGGAGCAAGATTA+GGG | 0.365827 | 1.2:+46042505 | MS.gene065734:CDS |
| CAGAATCATGAGGAGCCTTA+TGG | 0.369861 | 1.2:+46042662 | MS.gene065734:CDS |
| GATTAGGGTTTATAGACATT+GGG | 0.375229 | 1.2:+46042520 | MS.gene065734:CDS |
| TCTTGTGTATATTGACTGTT+TGG | 0.377674 | 1.2:+46042554 | MS.gene065734:CDS |
| CAATGGTAAGTGGTAGTATA+AGG | 0.379604 | 1.2:+46039820 | MS.gene065734:CDS |
| TGCGCCCATGTCTGGTCGCT+TGG | 0.407246 | 1.2:-46042611 | None:intergenic |
| CGACGACGATGGAGTCTCTC+TGG | 0.408665 | 1.2:+46040028 | MS.gene065734:CDS |
| ATACCCGGTGGAGCAAGATT+AGG | 0.409412 | 1.2:+46042504 | MS.gene065734:CDS |
| GTGGGCAAACAGCCTTTGCC+AGG | 0.419823 | 1.2:+46040321 | MS.gene065734:intron |
| AGTGTGCAGCTGAGAGGAAC+AGG | 0.423390 | 1.2:+46039861 | MS.gene065734:CDS |
| ATAAGGCTCCTCATGATTCT+GGG | 0.426970 | 1.2:-46042660 | None:intergenic |
| TATGTTGACAGGCAGCTTCA+TGG | 0.433103 | 1.2:-46040054 | None:intergenic |
| AGGAAGCGGCTGCGAAGCAC+GGG | 0.455528 | 1.2:-46039957 | None:intergenic |
| AGATTAGGGTTTATAGACAT+TGG | 0.474730 | 1.2:+46042519 | MS.gene065734:CDS |
| CTCTGAAGGTCTATGTTGAC+AGG | 0.491476 | 1.2:-46040065 | None:intergenic |
| GAGAATGGTGGGTGGTATTG+TGG | 0.491715 | 1.2:-46039935 | None:intergenic |
| AAACCCTAATCTTGCTCCAC+CGG | 0.495626 | 1.2:-46042508 | None:intergenic |
| GGCTGCGAAGCACGGGAGAA+TGG | 0.496064 | 1.2:-46039950 | None:intergenic |
| ATATATATACCTGAAAGAGC+AGG | 0.507742 | 1.2:-46040097 | None:intergenic |
| TATTGTGGTAATTAGAAATG+AGG | 0.516080 | 1.2:-46039920 | None:intergenic |
| CTCATGATTCTGGGCTCACC+CGG | 0.516530 | 1.2:-46042651 | None:intergenic |
| GCGAAGCACGGGAGAATGGT+GGG | 0.526904 | 1.2:-46039946 | None:intergenic |
| AAGGAAGCGGCTGCGAAGCA+CGG | 0.528983 | 1.2:-46039958 | None:intergenic |
| AAAGTGGTAGACTGGCTCCC+TGG | 0.531601 | 1.2:-46040339 | None:intergenic |
| ACTTCTGAAGAGCTTCCATA+AGG | 0.531730 | 1.2:-46042677 | None:intergenic |
| GCTGAGAAGGCAGCGGAACA+TGG | 0.532009 | 1.2:-46039893 | None:intergenic |
| GAGACTCCATCGTCGTCGGT+GGG | 0.532066 | 1.2:-46040023 | None:intergenic |
| CATGAAAGATAAGGTGCCGC+CGG | 0.533196 | 1.2:+46042632 | MS.gene065734:CDS |
| AGGCGTGGAAAGTGGTAGAC+TGG | 0.536072 | 1.2:-46040347 | None:intergenic |
| GAAATGAGGGAGTGCTGAGA+AGG | 0.539560 | 1.2:-46039906 | None:intergenic |
| GTAGACTGGCTCCCTGGCAA+AGG | 0.542128 | 1.2:-46040333 | None:intergenic |
| ATTGTGGTAATTAGAAATGA+GGG | 0.543828 | 1.2:-46039919 | None:intergenic |
| AGAGACTCCATCGTCGTCGG+TGG | 0.551810 | 1.2:-46040024 | None:intergenic |
| GGCGGCACCCAAAGCTTCCG+CGG | 0.552892 | 1.2:+46039989 | MS.gene065734:CDS |
| GTTCAGATTGCCTCATTGTG+AGG | 0.553621 | 1.2:+46042702 | MS.gene065734:CDS |
| ACCACTTTCCACGCCTCTCA+AGG | 0.558258 | 1.2:+46040354 | MS.gene065734:CDS |
| CCGCCACTGTGAGAAGGAAG+CGG | 0.559280 | 1.2:-46039971 | None:intergenic |
| AACCCTAATCTTGCTCCACC+GGG | 0.559641 | 1.2:-46042507 | None:intergenic |
| ATGAAAGATAAGGTGCCGCC+GGG | 0.567047 | 1.2:+46042633 | MS.gene065734:CDS |
| ACCTTGAGAGGCGTGGAAAG+TGG | 0.572117 | 1.2:-46040355 | None:intergenic |
| AAAGGCATGGCAATGGTAAG+TGG | 0.575949 | 1.2:+46039810 | None:intergenic |
| CTGAGAAGGCAGCGGAACAT+GGG | 0.578627 | 1.2:-46039892 | None:intergenic |
| TGCGAAGCACGGGAGAATGG+TGG | 0.579170 | 1.2:-46039947 | None:intergenic |
| GCGGCACCCAAAGCTTCCGC+GGG | 0.584984 | 1.2:+46039990 | MS.gene065734:CDS |
| ACATGGGCGCATGAAAGATA+AGG | 0.585008 | 1.2:+46042623 | MS.gene065734:CDS |
| ATTAGGGTTTATAGACATTG+GGG | 0.590232 | 1.2:+46042521 | MS.gene065734:CDS |
| TTATATATGTGTACCTTGAG+AGG | 0.592519 | 1.2:-46040367 | None:intergenic |
| GACGACGATGGAGTCTCTCT+GGG | 0.598218 | 1.2:+46040029 | MS.gene065734:CDS |
| TGGGTGCCGCCACTGTGAGA+AGG | 0.603138 | 1.2:-46039977 | None:intergenic |
| TGGGCAAACAGCCTTTGCCA+GGG | 0.603588 | 1.2:+46040322 | MS.gene065734:CDS |
| AGACTCCATCGTCGTCGGTG+GGG | 0.604451 | 1.2:-46040022 | None:intergenic |
| TATATATACCTGAAAGAGCA+GGG | 0.607634 | 1.2:-46040096 | None:intergenic |
| AGGGAGTGCTGAGAAGGCAG+CGG | 0.608254 | 1.2:-46039900 | None:intergenic |
| CAGAGAGACTCCATCGTCGT+CGG | 0.615294 | 1.2:-46040027 | None:intergenic |
| AAACAGGTTGACAAAATACC+CGG | 0.616364 | 1.2:+46042489 | MS.gene065734:intron |
| GCAGGGAATCGAATCTCTGA+AGG | 0.624992 | 1.2:-46040079 | None:intergenic |
| AGAAGGGAAAGGCATGGCAA+TGG | 0.626726 | 1.2:+46039803 | None:intergenic |
| TACAGCCCCACCGACGACGA+TGG | 0.636039 | 1.2:+46040017 | MS.gene065734:CDS |
| CCGCTTCCTTCTCACAGTGG+CGG | 0.641992 | 1.2:+46039971 | MS.gene065734:CDS |
| GGTGGGGCTGTAGCTTCCCG+CGG | 0.664372 | 1.2:-46040006 | None:intergenic |
| CTGGTCGCTTGGAAAACTGG+AGG | 0.670468 | 1.2:-46042600 | None:intergenic |
| CAGCCGCTTCCTTCTCACAG+TGG | 0.684846 | 1.2:+46039968 | MS.gene065734:CDS |
| TATGTGTACCTTGAGAGGCG+TGG | 0.685226 | 1.2:-46040362 | None:intergenic |
| ATGATTCTGGGCTCACCCGG+CGG | 0.687233 | 1.2:-46042648 | None:intergenic |
| TGCTTGAGTGTGCAGCTGAG+AGG | 0.688346 | 1.2:+46039855 | MS.gene065734:CDS |
| CGGGTGAGCCCAGAATCATG+AGG | 0.694987 | 1.2:+46042652 | MS.gene065734:CDS |
| CAGGTTGACAAAATACCCGG+TGG | 0.732626 | 1.2:+46042492 | MS.gene065734:intron |
| AAGCACGGGAGAATGGTGGG+TGG | 0.747034 | 1.2:-46039943 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCCAAAAATAAGTTAA+GGG | - | chr1.2:46040562-46040581 | None:intergenic | 15.0% |
| !! | GTTAAATATAAGAATAATGT+TGG | - | chr1.2:46040231-46040250 | None:intergenic | 15.0% |
| !! | TAAAATCCAAAAATAAGTTA+AGG | - | chr1.2:46040563-46040582 | None:intergenic | 15.0% |
| !! | TATAATTTGAATTTCTAACT+AGG | - | chr1.2:46042134-46042153 | None:intergenic | 15.0% |
| !! | TATATTATACTACTATGTTT+AGG | + | chr1.2:46040115-46040134 | MS.gene065734:intron | 15.0% |
| !! | TCATTTCAATTTAATAAAAC+AGG | + | chr1.2:46042473-46042492 | MS.gene065734:intron | 15.0% |
| !! | TTAGAAATTCAAATTATAGA+TGG | + | chr1.2:46042136-46042155 | MS.gene065734:intron | 15.0% |
| !!! | AAATTTCAAGTTAAACTAAT+AGG | - | chr1.2:46040435-46040454 | None:intergenic | 15.0% |
| !!! | AATTTCTTTTAAGAATGTTA+AGG | + | chr1.2:46041639-46041658 | MS.gene065734:intron | 15.0% |
| !!! | CTTATTTTTGGATTTTAATT+TGG | + | chr1.2:46040566-46040585 | MS.gene065734:intron | 15.0% |
| !! | ATATAAGAATAATGTTGGTA+AGG | - | chr1.2:46040226-46040245 | None:intergenic | 20.0% |
| !! | CACTAAAATCTCAAATTAAT+TGG | + | chr1.2:46041043-46041062 | MS.gene065734:intron | 20.0% |
| !! | GAAATCCAAAAATAAGTTAA+GGG | + | chr1.2:46042000-46042019 | MS.gene065734:intron | 20.0% |
| !! | TGAAATCCAAAAATAAGTTA+AGG | + | chr1.2:46041999-46042018 | MS.gene065734:intron | 20.0% |
| !! | TTTAGGCTTAATTAATACTT+TGG | + | chr1.2:46040535-46040554 | MS.gene065734:intron | 20.0% |
| !!! | AGTTTTTTGACAAAAACTAA+CGG | - | chr1.2:46041922-46041903 | None:intergenic | 20.0% |
| !!! | ATGATTATGATTCTTGTTTT+GGG | + | chr1.2:46041612-46041631 | MS.gene065734:intron | 20.0% |
| !!! | CTTATTTTTGGATTTCAATT+TGG | - | chr1.2:46041996-46042015 | None:intergenic | 20.0% |
| !!! | TTAATTTGAGATTTTAGTGA+AGG | - | chr1.2:46041042-46041061 | None:intergenic | 20.0% |
| ! | ACTTAAGGAACTTAAAACAA+AGG | - | chr1.2:46042044-46042063 | None:intergenic | 25.0% |
| ! | AGAATGTTAAGGAAAATGAA+AGG | + | chr1.2:46041650-46041669 | MS.gene065734:intron | 25.0% |
| ! | ATAACAATGAAATGCAAACA+AGG | - | chr1.2:46040407-46040426 | None:intergenic | 25.0% |
| ! | ATTGTGGTAATTAGAAATGA+GGG | - | chr1.2:46039922-46039941 | None:intergenic | 25.0% |
| ! | GAATTTGAATCTCTCTATTA+TGG | + | chr1.2:46041330-46041349 | MS.gene065734:intron | 25.0% |
| ! | TAAGCCTAAAACAAATCAAA+TGG | - | chr1.2:46040525-46040544 | None:intergenic | 25.0% |
| ! | TATTGTGGTAATTAGAAATG+AGG | - | chr1.2:46039923-46039942 | None:intergenic | 25.0% |
| ! | TTATAAGTTAGTTCGTCAAA+TGG | - | chr1.2:46040287-46040306 | None:intergenic | 25.0% |
| ! | TTATTGTAGTGTATAGTCTA+GGG | - | chr1.2:46042300-46042319 | None:intergenic | 25.0% |
| ! | TTGTATTCATCCATCTAAAA+AGG | + | chr1.2:46040931-46040950 | MS.gene065734:intron | 25.0% |
| ! | TTTGACAAAAACTAACAGAA+GGG | + | chr1.2:46041908-46041927 | MS.gene065734:intron | 25.0% |
| !! | ATTGTTGTTGATGAAGAAAT+AGG | - | chr1.2:46040801-46040820 | None:intergenic | 25.0% |
| !! | CTAACTTATAATTTGTGTTG+TGG | + | chr1.2:46040296-46040315 | MS.gene065734:intron | 25.0% |
| !! | TTGTTGTTGATGAAGAAATA+GGG | - | chr1.2:46040800-46040819 | None:intergenic | 25.0% |
| !! | TTTGAGACAGTTTAAAGTTA+GGG | + | chr1.2:46041968-46041987 | MS.gene065734:intron | 25.0% |
| !! | TTTGAGACAGTTTAAAGTTA+GGG | - | chr1.2:46041987-46041968 | None:intergenic | 25.0% |
| !! | TTTTGACAAAAACTAACAGA+AGG | + | chr1.2:46041907-46041926 | MS.gene065734:intron | 25.0% |
| !!! | GATGATTATGATTCTTGTTT+TGG | + | chr1.2:46041611-46041630 | MS.gene065734:intron | 25.0% |
| !!! | TAACACCGTGTTTTAAATAA+CGG | + | chr1.2:46042159-46042178 | MS.gene065734:intron | 25.0% |
| AAAATAAGTTAAGGGACCAA+AGG | + | chr1.2:46042008-46042027 | MS.gene065734:intron | 30.0% | |
| AAAATGGAAATTGGAAATGG+TGG | - | chr1.2:46041249-46041268 | None:intergenic | 30.0% | |
| AACTTTAAACTGTCTCAAAG+TGG | + | chr1.2:46040595-46040614 | MS.gene065734:intron | 30.0% | |
| AACTTTAAACTGTCTCAAAG+TGG | - | chr1.2:46040614-46040595 | None:intergenic | 30.0% | |
| AAGAGAGTCAAAGAGAAAAA+GGG | + | chr1.2:46041305-46041324 | MS.gene065734:intron | 30.0% | |
| AAGGTTAAAGGTTGAAACTT+TGG | - | chr1.2:46041188-46041207 | None:intergenic | 30.0% | |
| AATGAAATGCAAACAAGGAA+CGG | - | chr1.2:46040402-46040421 | None:intergenic | 30.0% | |
| AGATTAGGGTTTATAGACAT+TGG | + | chr1.2:46042519-46042538 | MS.gene065734:CDS | 30.0% | |
| AGTAAACGGATGTATACTTA+AGG | - | chr1.2:46040623-46040642 | None:intergenic | 30.0% | |
| ATATATATACCTGAAAGAGC+AGG | - | chr1.2:46040100-46040119 | None:intergenic | 30.0% | |
| ATCCGAATTCAAAGAGAAAA+AGG | + | chr1.2:46041278-46041297 | MS.gene065734:intron | 30.0% | |
| ATGTTGAAGAAACGCAATTT+AGG | - | chr1.2:46040156-46040175 | None:intergenic | 30.0% | |
| ATTAGCATGAATTGGGAAAT+GGG | - | chr1.2:46041221-46041240 | None:intergenic | 30.0% | |
| ATTAGGGTTTATAGACATTG+GGG | + | chr1.2:46042521-46042540 | MS.gene065734:CDS | 30.0% | |
| CAAAGGCTTAATTAAACCTT+TGG | - | chr1.2:46042027-46042046 | None:intergenic | 30.0% | |
| CTGAAGAAAATATGGATGTT+CGG | + | chr1.2:46041471-46041490 | MS.gene065734:intron | 30.0% | |
| CTTATTGTAGTGTATAGTCT+AGG | - | chr1.2:46042301-46042320 | None:intergenic | 30.0% | |
| GACTATACACTACAATAAGA+TGG | + | chr1.2:46042302-46042321 | MS.gene065734:intron | 30.0% | |
| GATGAAGAAATAGTTGTTGA+TGG | - | chr1.2:46040831-46040850 | None:intergenic | 30.0% | |
| GATTAGGGTTTATAGACATT+GGG | + | chr1.2:46042520-46042539 | MS.gene065734:CDS | 30.0% | |
| GGATTTGATTAGCATGAATT+GGG | - | chr1.2:46041228-46041247 | None:intergenic | 30.0% | |
| GTAAACGGATGTATACTTAA+GGG | - | chr1.2:46040622-46040641 | None:intergenic | 30.0% | |
| TAAGGAAAATGAAAGGAAGA+TGG | + | chr1.2:46041657-46041676 | MS.gene065734:intron | 30.0% | |
| TAAGTTCCTTAAGTTTATGC+TGG | + | chr1.2:46042050-46042069 | MS.gene065734:intron | 30.0% | |
| TATACATCCGTTTACTATAG+TGG | + | chr1.2:46040627-46040646 | MS.gene065734:intron | 30.0% | |
| TATATATACCTGAAAGAGCA+GGG | - | chr1.2:46040099-46040118 | None:intergenic | 30.0% | |
| TCAAAATCGTGAAGAAGAAA+AGG | + | chr1.2:46040993-46041012 | MS.gene065734:intron | 30.0% | |
| TCCATCTAAAAAGGAAGAAA+AGG | + | chr1.2:46040940-46040959 | MS.gene065734:intron | 30.0% | |
| TCCGAATTCAAAGAGAAAAA+GGG | + | chr1.2:46041279-46041298 | MS.gene065734:intron | 30.0% | |
| TGGAAAATGGAAATTGGAAA+TGG | - | chr1.2:46041252-46041271 | None:intergenic | 30.0% | |
| TGGATTTGATTAGCATGAAT+TGG | - | chr1.2:46041229-46041248 | None:intergenic | 30.0% | |
| TGTCATTCTCAAACTTTGTT+TGG | + | chr1.2:46041547-46041566 | MS.gene065734:intron | 30.0% | |
| TTAAAGGTTGAAACTTTGGA+GGG | - | chr1.2:46041184-46041203 | None:intergenic | 30.0% | |
| TTATATATGTGTACCTTGAG+AGG | - | chr1.2:46040370-46040389 | None:intergenic | 30.0% | |
| TTCAATCAAATCATCATCAG+TGG | - | chr1.2:46041498-46041517 | None:intergenic | 30.0% | |
| TTTGAATTTCTAACTAGGCT+AGG | - | chr1.2:46042129-46042148 | None:intergenic | 30.0% | |
| TTTGACAAAAACTAACGGAA+GGG | - | chr1.2:46040654-46040673 | None:intergenic | 30.0% | |
| ! | ACCCTTTTTCTCTTTGAATT+CGG | - | chr1.2:46041283-46041302 | None:intergenic | 30.0% |
| ! | CATGACCGTTATTTAAAACA+CGG | - | chr1.2:46042167-46042186 | None:intergenic | 30.0% |
| ! | TCCTTTTCTTCCTTTTTAGA+TGG | - | chr1.2:46040944-46040963 | None:intergenic | 30.0% |
| ! | TCTTGTGTATATTGACTGTT+TGG | + | chr1.2:46042554-46042573 | MS.gene065734:CDS | 30.0% |
| ! | TGTTGTTGATGAAGAAATAG+GGG | - | chr1.2:46040799-46040818 | None:intergenic | 30.0% |
| ! | TTGAGACAGTTTAAAGTTAG+GGG | + | chr1.2:46041969-46041988 | MS.gene065734:intron | 30.0% |
| ! | TTGAGACAGTTTAAAGTTAG+GGG | - | chr1.2:46041988-46041969 | None:intergenic | 30.0% |
| ! | TTGGATTTAAAAAGCACACA+TGG | - | chr1.2:46041841-46041860 | None:intergenic | 30.0% |
| ! | TTTCTTCTTCACGATTTTGA+TGG | - | chr1.2:46040993-46041012 | None:intergenic | 30.0% |
| ! | TTTTGACAAAAACTAACGGA+AGG | - | chr1.2:46040655-46040674 | None:intergenic | 30.0% |
| !! | CTTTGAGACAGTTTAAAGTT+AGG | + | chr1.2:46041967-46041986 | MS.gene065734:intron | 30.0% |
| !! | CTTTGAGACAGTTTAAAGTT+AGG | - | chr1.2:46041986-46041967 | None:intergenic | 30.0% |
| !! | TACAAGTGCTGAAGAAAATA+TGG | + | chr1.2:46041463-46041482 | MS.gene065734:intron | 30.0% |
| !! | TTGGTCCCTTAACTTATTTT+TGG | + | chr1.2:46040554-46040573 | MS.gene065734:intron | 30.0% |
| !! | TTGGTCCCTTAACTTATTTT+TGG | - | chr1.2:46040573-46040554 | None:intergenic | 30.0% |
| !!! | GTAGCCATTTGATTTGTTTT+AGG | + | chr1.2:46040518-46040537 | MS.gene065734:intron | 30.0% |
| AAGAAATAGGGGTGAAGAAA+TGG | - | chr1.2:46040788-46040807 | None:intergenic | 35.0% | |
| AAGCTTGAAACCAATAAGAG+TGG | + | chr1.2:46041380-46041399 | MS.gene065734:intron | 35.0% | |
| AATTGAGATCGAGATGTTTG+TGG | - | chr1.2:46040883-46040902 | None:intergenic | 35.0% | |
| ACAAATCAAATGGCTACCAT+AGG | - | chr1.2:46040515-46040534 | None:intergenic | 35.0% | |
| AGAGAATTGAGATCTGGATA+TGG | - | chr1.2:46041090-46041109 | None:intergenic | 35.0% | |
| AGCTATCCAGCATAAACTTA+AGG | - | chr1.2:46042059-46042078 | None:intergenic | 35.0% | |
| AGCTTGAAACCAATAAGAGT+GGG | + | chr1.2:46041381-46041400 | MS.gene065734:intron | 35.0% | |
| AGTAAACGGATGTATGCTTA+AGG | + | chr1.2:46041939-46041958 | MS.gene065734:intron | 35.0% | |
| AGTGTTTGTGACATTGTTCT+TGG | - | chr1.2:46042369-46042388 | None:intergenic | 35.0% | |
| ATGAAATGCAAACAAGGAAC+GGG | - | chr1.2:46040401-46040420 | None:intergenic | 35.0% | |
| ATTATGGAGAATCAAGGTTG+CGG | + | chr1.2:46042219-46042238 | MS.gene065734:intron | 35.0% | |
| CAATGGTAAGTGGTAGTATA+AGG | + | chr1.2:46039820-46039839 | MS.gene065734:CDS | 35.0% | |
| CATACATCCGTTTACTATAG+TGG | - | chr1.2:46041935-46041954 | None:intergenic | 35.0% | |
| CTTGATTCTCCATAATAGCA+AGG | - | chr1.2:46042215-46042234 | None:intergenic | 35.0% | |
| GAAGAGAGTCAAAGAGAAAA+AGG | + | chr1.2:46041304-46041323 | MS.gene065734:intron | 35.0% | |
| GAGAATTGAGATCTGGATAT+GGG | - | chr1.2:46041089-46041108 | None:intergenic | 35.0% | |
| GATGTTTGTGGTTGTTGAAA+AGG | - | chr1.2:46040871-46040890 | None:intergenic | 35.0% | |
| GATTAGCATGAATTGGGAAA+TGG | - | chr1.2:46041222-46041241 | None:intergenic | 35.0% | |
| GTAAACGGATGTATGCTTAA+GGG | + | chr1.2:46041940-46041959 | MS.gene065734:intron | 35.0% | |
| GTTAAAGGTTGAAACTTTGG+AGG | - | chr1.2:46041185-46041204 | None:intergenic | 35.0% | |
| TCAGACTGGAAAATGGAAAT+TGG | - | chr1.2:46041258-46041277 | None:intergenic | 35.0% | |
| TTAGCATGAATTGGGAAATG+GGG | - | chr1.2:46041220-46041239 | None:intergenic | 35.0% | |
| TTGATACTCTTAGCTTCCTA+TGG | + | chr1.2:46040496-46040515 | MS.gene065734:intron | 35.0% | |
| ! | AAACAGGTTGACAAAATACC+CGG | + | chr1.2:46042489-46042508 | MS.gene065734:intron | 35.0% |
| ! | ACTGGAGGAGAATTTTCATT+TGG | - | chr1.2:46042588-46042607 | None:intergenic | 35.0% |
| ! | ATAATTTGTGTTGTGGCAGT+GGG | + | chr1.2:46040303-46040322 | MS.gene065734:intron | 35.0% |
| ! | GAAAAGGTTGTTGTTGTTGA+TGG | - | chr1.2:46040855-46040874 | None:intergenic | 35.0% |
| ! | GATGGTGTGTAGTAATTTTC+AGG | + | chr1.2:46041681-46041700 | MS.gene065734:intron | 35.0% |
| ! | TAAAAAGCACACATGGCATA+CGG | - | chr1.2:46041834-46041853 | None:intergenic | 35.0% |
| ! | TATAATTTGTGTTGTGGCAG+TGG | + | chr1.2:46040302-46040321 | MS.gene065734:intron | 35.0% |
| ! | TTGGATTTGAAAAGCACACA+TGG | + | chr1.2:46040721-46040740 | MS.gene065734:intron | 35.0% |
| ! | TTTGATTGGTGATCAATGGT+TGG | + | chr1.2:46040702-46040721 | MS.gene065734:intron | 35.0% |
| ! | TTTTCTTCAGCACTTGTAGT+AGG | - | chr1.2:46041461-46041480 | None:intergenic | 35.0% |
| !! | CGTGTTTTAAATAACGGTCA+TGG | + | chr1.2:46042165-46042184 | MS.gene065734:intron | 35.0% |
| !! | CTTGCTATTATGGAGAATCA+AGG | + | chr1.2:46042213-46042232 | MS.gene065734:intron | 35.0% |
| !! | TTGGTGATGATTTGAGTGAT+GGG | - | chr1.2:46041141-46041160 | None:intergenic | 35.0% |
| !!! | CAGTTTTGATTGGTGATCAA+TGG | + | chr1.2:46040698-46040717 | MS.gene065734:intron | 35.0% |
| !!! | GGGTTTTGAGAAAAGGTTAA+AGG | - | chr1.2:46041200-46041219 | None:intergenic | 35.0% |
| AAAGAGAAGGATTGTGAGGT+TGG | - | chr1.2:46041160-46041179 | None:intergenic | 40.0% | |
| AAATGAAAGGAAGATGGCGA+TGG | + | chr1.2:46041663-46041682 | MS.gene065734:intron | 40.0% | |
| ATAAGGCTCCTCATGATTCT+GGG | - | chr1.2:46042663-46042682 | None:intergenic | 40.0% | |
| CACCAATCAAAACTGACACA+TGG | - | chr1.2:46040693-46040712 | None:intergenic | 40.0% | |
| CTTTGAATTCGGATTCAGAC+TGG | - | chr1.2:46041272-46041291 | None:intergenic | 40.0% | |
| GAAGGGACCACTATAGTAAA+CGG | + | chr1.2:46041925-46041944 | MS.gene065734:intron | 40.0% | |
| GAAGGGACCACTATAGTAAA+CGG | - | chr1.2:46041944-46041925 | None:intergenic | 40.0% | |
| GGTACATAGTACTTAGCTGT+AGG | - | chr1.2:46042348-46042367 | None:intergenic | 40.0% | |
| TCAAAACTGACACATGGCAA+AGG | - | chr1.2:46040687-46040706 | None:intergenic | 40.0% | |
| TCGGGATGGCATTACAATTT+CGG | + | chr1.2:46042257-46042276 | MS.gene065734:intron | 40.0% | |
| TGGAAGAGAGAATTGAGATC+TGG | - | chr1.2:46041096-46041115 | None:intergenic | 40.0% | |
| TTCGGATTCAGACTGGAAAA+TGG | - | chr1.2:46041265-46041284 | None:intergenic | 40.0% | |
| TTTCTTGAGCCCACTCTTAT+TGG | - | chr1.2:46041393-46041412 | None:intergenic | 40.0% | |
| ! | AACTTTGGAGGGAAAAGAGA+AGG | - | chr1.2:46041173-46041192 | None:intergenic | 40.0% |
| ! | ACTTCTGAAGAGCTTCCATA+AGG | - | chr1.2:46042680-46042699 | None:intergenic | 40.0% |
| ! | TTGAGTGATGGGATTAAACG+TGG | - | chr1.2:46041130-46041149 | None:intergenic | 40.0% |
| ! | TTTGCTTGGTGATCAATGGT+TGG | - | chr1.2:46041860-46041879 | None:intergenic | 40.0% |
| !! | AGTCGTGATCCTTGCTATTA+TGG | + | chr1.2:46042203-46042222 | MS.gene065734:intron | 40.0% |
| !! | CAGTTTTGCTTGGTGATCAA+TGG | - | chr1.2:46041864-46041883 | None:intergenic | 40.0% |
| !! | GTTGGTGATGATTTGAGTGA+TGG | - | chr1.2:46041142-46041161 | None:intergenic | 40.0% |
| !! | TAAACGTGGAGATGGTTTTG+TGG | - | chr1.2:46041116-46041135 | None:intergenic | 40.0% |
| !! | TGCCATGTGTCAGTTTTGAT+TGG | + | chr1.2:46040688-46040707 | MS.gene065734:intron | 40.0% |
| !! | TTATTGGTTTCAAGCTTGCG+TGG | - | chr1.2:46041377-46041396 | None:intergenic | 40.0% |
| !!! | GGAAATGGGGTTTTGAGAAA+AGG | - | chr1.2:46041207-46041226 | None:intergenic | 40.0% |
| AAACCCTAATCTTGCTCCAC+CGG | - | chr1.2:46042511-46042530 | None:intergenic | 45.0% | |
| ACATGGGCGCATGAAAGATA+AGG | + | chr1.2:46042623-46042642 | MS.gene065734:CDS | 45.0% | |
| ATGGGTCGTGAAGATGATGA+TGG | - | chr1.2:46041071-46041090 | None:intergenic | 45.0% | |
| ATTCGATTCCCTGCTCTTTC+AGG | + | chr1.2:46040088-46040107 | MS.gene065734:CDS | 45.0% | |
| CAGAATCATGAGGAGCCTTA+TGG | + | chr1.2:46042662-46042681 | MS.gene065734:CDS | 45.0% | |
| CATAAGGCTCCTCATGATTC+TGG | - | chr1.2:46042664-46042683 | None:intergenic | 45.0% | |
| GATGGGATTAAACGTGGAGA+TGG | - | chr1.2:46041124-46041143 | None:intergenic | 45.0% | |
| GGGAAAAGAGAAGGATTGTG+AGG | - | chr1.2:46041164-46041183 | None:intergenic | 45.0% | |
| TAGGGGTGAAGAAATGGTGA+TGG | - | chr1.2:46040782-46040801 | None:intergenic | 45.0% | |
| TATGTTGACAGGCAGCTTCA+TGG | - | chr1.2:46040057-46040076 | None:intergenic | 45.0% | |
| TTGTAATGCCATCCCGATTG+AGG | - | chr1.2:46042254-46042273 | None:intergenic | 45.0% | |
| ! | AAGAGTGGGCTCAAGAAATG+TGG | + | chr1.2:46041395-46041414 | MS.gene065734:intron | 45.0% |
| ! | CTCTGAAGGTCTATGTTGAC+AGG | - | chr1.2:46040068-46040087 | None:intergenic | 45.0% |
| ! | TGAAAAGCACACATGGCATG+TGG | + | chr1.2:46040728-46040747 | MS.gene065734:intron | 45.0% |
| ! | TTTTCCAAGCGACCAGACAT+GGG | + | chr1.2:46042607-46042626 | MS.gene065734:CDS | 45.0% |
| AAAGCACACATGGCATACGG+TGG | - | chr1.2:46041831-46041850 | None:intergenic | 50.0% | |
| AACCCTAATCTTGCTCCACC+GGG | - | chr1.2:46042510-46042529 | None:intergenic | 50.0% | |
| ATACCCGGTGGAGCAAGATT+AGG | + | chr1.2:46042504-46042523 | MS.gene065734:CDS | 50.0% | |
| ATCTTTCATGCGCCCATGTC+TGG | - | chr1.2:46042622-46042641 | None:intergenic | 50.0% | |
| CACCAAGCAAAACTGACACG+TGG | + | chr1.2:46041869-46041888 | MS.gene065734:intron | 50.0% | |
| GCAAAACTGACACGTGGCAA+AGG | + | chr1.2:46041875-46041894 | MS.gene065734:intron | 50.0% | |
| GCAGGGAATCGAATCTCTGA+AGG | - | chr1.2:46040082-46040101 | None:intergenic | 50.0% | |
| TACCCGGTGGAGCAAGATTA+GGG | + | chr1.2:46042505-46042524 | MS.gene065734:CDS | 50.0% | |
| TATGTGTACCTTGAGAGGCG+TGG | - | chr1.2:46040365-46040384 | None:intergenic | 50.0% | |
| TGTCTGGTCGCTTGGAAAAC+TGG | - | chr1.2:46042606-46042625 | None:intergenic | 50.0% | |
| ! | CAGGTTGACAAAATACCCGG+TGG | + | chr1.2:46042492-46042511 | MS.gene065734:intron | 50.0% |
| ! | GTTTTCCAAGCGACCAGACA+TGG | + | chr1.2:46042606-46042625 | MS.gene065734:CDS | 50.0% |
| ! | TGCCACGTGTCAGTTTTGCT+TGG | - | chr1.2:46041874-46041893 | None:intergenic | 50.0% |
| !! | ATGAAAGATAAGGTGCCGCC+GGG | + | chr1.2:46042633-46042652 | MS.gene065734:CDS | 50.0% |
| !! | CATGAAAGATAAGGTGCCGC+CGG | + | chr1.2:46042632-46042651 | MS.gene065734:CDS | 50.0% |
| !! | GAAATGAGGGAGTGCTGAGA+AGG | - | chr1.2:46039909-46039928 | None:intergenic | 50.0% |
| !! | GAGAATGGTGGGTGGTATTG+TGG | - | chr1.2:46039938-46039957 | None:intergenic | 50.0% |
| ACCACTTTCCACGCCTCTCA+AGG | + | chr1.2:46040354-46040373 | MS.gene065734:CDS | 55.0% | |
| AGGCGTGGAAAGTGGTAGAC+TGG | - | chr1.2:46040350-46040369 | None:intergenic | 55.0% | |
| AGTGTGCAGCTGAGAGGAAC+AGG | + | chr1.2:46039861-46039880 | MS.gene065734:CDS | 55.0% | |
| CAATGCAGCCTCAATCGGGA+TGG | + | chr1.2:46042243-46042262 | MS.gene065734:intron | 55.0% | |
| CAGAGAGACTCCATCGTCGT+CGG | - | chr1.2:46040030-46040049 | None:intergenic | 55.0% | |
| CATCCCGATTGAGGCTGCAT+TGG | - | chr1.2:46042245-46042264 | None:intergenic | 55.0% | |
| CTCATGATTCTGGGCTCACC+CGG | - | chr1.2:46042654-46042673 | None:intergenic | 55.0% | |
| CTGAGAAGGCAGCGGAACAT+GGG | - | chr1.2:46039895-46039914 | None:intergenic | 55.0% | |
| CTGGTCGCTTGGAAAACTGG+AGG | - | chr1.2:46042603-46042622 | None:intergenic | 55.0% | |
| GACGACGATGGAGTCTCTCT+GGG | + | chr1.2:46040029-46040048 | MS.gene065734:CDS | 55.0% | |
| TAGCTTCCCGCGGAAGCTTT+GGG | - | chr1.2:46039999-46040018 | None:intergenic | 55.0% | |
| TGCTTGAGTGTGCAGCTGAG+AGG | + | chr1.2:46039855-46039874 | MS.gene065734:CDS | 55.0% | |
| TGGGCAAACAGCCTTTGCCA+GGG | + | chr1.2:46040322-46040341 | MS.gene065734:CDS | 55.0% | |
| ! | AAAGTGGTAGACTGGCTCCC+TGG | - | chr1.2:46040342-46040361 | None:intergenic | 55.0% |
| ! | ACCTTGAGAGGCGTGGAAAG+TGG | - | chr1.2:46040358-46040377 | None:intergenic | 55.0% |
| AAGGAAGCGGCTGCGAAGCA+CGG | - | chr1.2:46039961-46039980 | None:intergenic | 60.0% | |
| AGACTCCATCGTCGTCGGTG+GGG | - | chr1.2:46040025-46040044 | None:intergenic | 60.0% | |
| AGAGACTCCATCGTCGTCGG+TGG | - | chr1.2:46040027-46040046 | None:intergenic | 60.0% | |
| ATGATTCTGGGCTCACCCGG+CGG | - | chr1.2:46042651-46042670 | None:intergenic | 60.0% | |
| CAGCCGCTTCCTTCTCACAG+TGG | + | chr1.2:46039968-46039987 | MS.gene065734:CDS | 60.0% | |
| CCGCCACTGTGAGAAGGAAG+CGG | - | chr1.2:46039974-46039993 | None:intergenic | 60.0% | |
| CCGCTTCCTTCTCACAGTGG+CGG | + | chr1.2:46039971-46039990 | MS.gene065734:CDS | 60.0% | |
| CGACGACGATGGAGTCTCTC+TGG | + | chr1.2:46040028-46040047 | MS.gene065734:CDS | 60.0% | |
| CGGCCAATGCAGCCTCAATC+GGG | + | chr1.2:46042239-46042258 | MS.gene065734:intron | 60.0% | |
| CGGGTGAGCCCAGAATCATG+AGG | + | chr1.2:46042652-46042671 | MS.gene065734:CDS | 60.0% | |
| GAGACTCCATCGTCGTCGGT+GGG | - | chr1.2:46040026-46040045 | None:intergenic | 60.0% | |
| GCGAAGCACGGGAGAATGGT+GGG | - | chr1.2:46039949-46039968 | None:intergenic | 60.0% | |
| GCGGCCAATGCAGCCTCAAT+CGG | + | chr1.2:46042238-46042257 | MS.gene065734:intron | 60.0% | |
| GCTGAGAAGGCAGCGGAACA+TGG | - | chr1.2:46039896-46039915 | None:intergenic | 60.0% | |
| GTAGCTTCCCGCGGAAGCTT+TGG | - | chr1.2:46040000-46040019 | None:intergenic | 60.0% | |
| GTGGGCAAACAGCCTTTGCC+AGG | + | chr1.2:46040321-46040340 | MS.gene065734:intron | 60.0% | |
| TGCGAAGCACGGGAGAATGG+TGG | - | chr1.2:46039950-46039969 | None:intergenic | 60.0% | |
| ! | AAGCACGGGAGAATGGTGGG+TGG | - | chr1.2:46039946-46039965 | None:intergenic | 60.0% |
| ! | GTAGACTGGCTCCCTGGCAA+AGG | - | chr1.2:46040336-46040355 | None:intergenic | 60.0% |
| !! | AGGGAGTGCTGAGAAGGCAG+CGG | - | chr1.2:46039903-46039922 | None:intergenic | 60.0% |
| AGGAAGCGGCTGCGAAGCAC+GGG | - | chr1.2:46039960-46039979 | None:intergenic | 65.0% | |
| GGCTGCGAAGCACGGGAGAA+TGG | - | chr1.2:46039953-46039972 | None:intergenic | 65.0% | |
| TACAGCCCCACCGACGACGA+TGG | + | chr1.2:46040017-46040036 | MS.gene065734:CDS | 65.0% | |
| TGCGCCCATGTCTGGTCGCT+TGG | - | chr1.2:46042614-46042633 | None:intergenic | 65.0% | |
| ! | TGGGTGCCGCCACTGTGAGA+AGG | - | chr1.2:46039980-46039999 | None:intergenic | 65.0% |
| GCGGCACCCAAAGCTTCCGC+GGG | + | chr1.2:46039990-46040009 | MS.gene065734:CDS | 70.0% | |
| GGCGGCACCCAAAGCTTCCG+CGG | + | chr1.2:46039989-46040008 | MS.gene065734:CDS | 70.0% | |
| GGTGGGGCTGTAGCTTCCCG+CGG | - | chr1.2:46040009-46040028 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 46039816 | 46042722 | 46039816 | ID=MS.gene065734 |
| chr1.2 | mRNA | 46039816 | 46042722 | 46039816 | ID=MS.gene065734.t1;Parent=MS.gene065734 |
| chr1.2 | exon | 46039816 | 46040109 | 46039816 | ID=MS.gene065734.t1.exon1;Parent=MS.gene065734.t1 |
| chr1.2 | CDS | 46039816 | 46040109 | 46039816 | ID=cds.MS.gene065734.t1;Parent=MS.gene065734.t1 |
| chr1.2 | exon | 46040322 | 46040375 | 46040322 | ID=MS.gene065734.t1.exon2;Parent=MS.gene065734.t1 |
| chr1.2 | CDS | 46040322 | 46040375 | 46040322 | ID=cds.MS.gene065734.t1;Parent=MS.gene065734.t1 |
| chr1.2 | exon | 46042495 | 46042722 | 46042495 | ID=MS.gene065734.t1.exon3;Parent=MS.gene065734.t1 |
| chr1.2 | CDS | 46042495 | 46042722 | 46042495 | ID=cds.MS.gene065734.t1;Parent=MS.gene065734.t1 |
| Gene Sequence |
| Protein sequence |
