Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074109.t1 | XP_024642417.1 | 98.4 | 501 | 8 | 0 | 1 | 501 | 1 | 501 | 5.30E-264 | 919.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074109.t1 | P94026 | 23.3 | 391 | 249 | 13 | 102 | 470 | 87 | 448 | 2.7e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074109.t1 | G7KNL1 | 98.4 | 501 | 8 | 0 | 1 | 501 | 1 | 501 | 3.8e-264 | 919.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene074109 | 0.819861 | 9.30E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene074109 | 0.878495 | 2.68E-69 | -1.69E-46 |
| MS.gene049217 | MS.gene074109 | 0.814879 | 1.23E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene074109 | 0.862399 | 5.21E-64 | -1.69E-46 |
| MS.gene049257 | MS.gene074109 | 0.82821 | 1.02E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene074109 | 0.851922 | 6.47E-61 | -1.69E-46 |
| MS.gene049320 | MS.gene074109 | 0.833865 | 4.17E-56 | -1.69E-46 |
| MS.gene04939 | MS.gene074109 | 0.8085 | 3.00E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene074109 | 0.837219 | 5.91E-57 | -1.69E-46 |
| MS.gene049627 | MS.gene074109 | 0.850816 | 1.33E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene074109 | 0.848783 | 4.92E-60 | -1.69E-46 |
| MS.gene049865 | MS.gene074109 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene074109 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene074109 | 0.858179 | 9.84E-63 | -1.69E-46 |
| MS.gene050165 | MS.gene074109 | 0.854628 | 1.08E-61 | -1.69E-46 |
| MS.gene050170 | MS.gene074109 | 0.843103 | 1.72E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene074109 | 0.808605 | 2.85E-50 | -1.69E-46 |
| MS.gene050403 | MS.gene074109 | 0.833221 | 6.04E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene074109 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene074109 | 0.862757 | 4.04E-64 | -1.69E-46 |
| MS.gene050507 | MS.gene074109 | 0.832044 | 1.18E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene074109 | 0.835716 | 1.43E-56 | -1.69E-46 |
| MS.gene050538 | MS.gene074109 | 0.815967 | 7.05E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene074109 | 0.888192 | 7.34E-73 | -1.69E-46 |
| MS.gene050612 | MS.gene074109 | 0.848801 | 4.86E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene074109 | 0.830032 | 3.69E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene074109 | 0.87101 | 9.46E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene074109 | 0.847358 | 1.22E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene074109 | 0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene050781 | MS.gene074109 | 0.85099 | 1.19E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene074109 | 0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene05081 | MS.gene074109 | 0.829187 | 5.92E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene074109 | 0.808828 | 2.56E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene074109 | 0.805925 | 1.05E-49 | -1.69E-46 |
| MS.gene050876 | MS.gene074109 | 0.809405 | 1.92E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene074109 | 0.881966 | 1.55E-70 | -1.69E-46 |
| MS.gene050950 | MS.gene074109 | 0.847769 | 9.37E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene074109 | 0.854329 | 1.32E-61 | -1.69E-46 |
| MS.gene05100 | MS.gene074109 | 0.822708 | 2.05E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene074109 | 0.866887 | 2.05E-65 | -1.69E-46 |
| MS.gene051694 | MS.gene074109 | 0.80629 | 8.84E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene074109 | 0.810224 | 1.28E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene074109 | 0.843592 | 1.27E-58 | -1.69E-46 |
| MS.gene051973 | MS.gene074109 | -0.819955 | 8.85E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene074109 | 0.846335 | 2.32E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene074109 | 0.84648 | 2.12E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene074109 | 0.862417 | 5.14E-64 | -1.69E-46 |
| MS.gene052501 | MS.gene074109 | 0.81114 | 8.12E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene074109 | 0.844165 | 8.95E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene074109 | 0.820081 | 8.28E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene074109 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene074109 | 0.842448 | 2.57E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene074109 | 0.844129 | 9.15E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene074109 | 0.827247 | 1.74E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene074109 | 0.857475 | 1.59E-62 | -1.69E-46 |
| MS.gene053207 | MS.gene074109 | 0.829697 | 4.45E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene074109 | 0.833084 | 6.53E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene074109 | 0.833394 | 5.47E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene074109 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene074109 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene053480 | MS.gene074109 | 0.858976 | 5.69E-63 | -1.69E-46 |
| MS.gene053574 | MS.gene074109 | 0.807505 | 4.89E-50 | -1.69E-46 |
| MS.gene053579 | MS.gene074109 | 0.808604 | 2.85E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene074109 | 0.821764 | 3.39E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene074109 | 0.839168 | 1.86E-57 | -1.69E-46 |
| MS.gene054344 | MS.gene074109 | 0.831525 | 1.59E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene074109 | 0.826871 | 2.14E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene074109 | 0.806941 | 6.44E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene074109 | 0.862651 | 4.36E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene074109 | 0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene074109 | 0.896054 | 5.33E-76 | -1.69E-46 |
| MS.gene054884 | MS.gene074109 | -0.809898 | 1.51E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene074109 | 0.845265 | 4.52E-59 | -1.69E-46 |
| MS.gene054954 | MS.gene074109 | 0.83715 | 6.16E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene074109 | 0.826038 | 3.38E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene074109 | 0.864761 | 9.64E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene074109 | 0.862931 | 3.57E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene074109 | 0.865384 | 6.14E-65 | -1.69E-46 |
| MS.gene055748 | MS.gene074109 | 0.865636 | 5.11E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene074109 | 0.83119 | 1.92E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene074109 | 0.854985 | 8.55E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene074109 | 0.872954 | 2.14E-67 | -1.69E-46 |
| MS.gene055941 | MS.gene074109 | 0.821048 | 4.97E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene074109 | 0.816986 | 4.17E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene074109 | 0.805389 | 1.37E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene074109 | 0.829944 | 3.88E-55 | -1.69E-46 |
| MS.gene056449 | MS.gene074109 | 0.818693 | 1.72E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene074109 | 0.830432 | 2.95E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene074109 | 0.845097 | 5.02E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene074109 | 0.827354 | 1.64E-54 | -1.69E-46 |
| MS.gene056550 | MS.gene074109 | -0.83715 | 6.16E-57 | -1.69E-46 |
| MS.gene056610 | MS.gene074109 | 0.844397 | 7.76E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene074109 | 0.827927 | 1.19E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene074109 | 0.883583 | 3.97E-71 | -1.69E-46 |
| MS.gene056877 | MS.gene074109 | 0.807613 | 4.64E-50 | -1.69E-46 |
| MS.gene056988 | MS.gene074109 | -0.809057 | 2.28E-50 | -1.69E-46 |
| MS.gene057048 | MS.gene074109 | 0.817827 | 2.69E-52 | -1.69E-46 |
| MS.gene057196 | MS.gene074109 | 0.837651 | 4.58E-57 | -1.69E-46 |
| MS.gene057332 | MS.gene074109 | 0.859106 | 5.20E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene074109 | 0.801263 | 9.78E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene074109 | 0.901326 | 3.00E-78 | -1.69E-46 |
| MS.gene057831 | MS.gene074109 | 0.882811 | 7.61E-71 | -1.69E-46 |
| MS.gene058334 | MS.gene074109 | -0.809651 | 1.70E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene074109 | 0.822908 | 1.84E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene074109 | 0.854715 | 1.02E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene074109 | 0.852915 | 3.37E-61 | -1.69E-46 |
| MS.gene058544 | MS.gene074109 | 0.876251 | 1.62E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene074109 | 0.840883 | 6.65E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene074109 | 0.873054 | 1.98E-67 | -1.69E-46 |
| MS.gene05883 | MS.gene074109 | 0.802979 | 4.34E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene074109 | 0.858763 | 6.59E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene074109 | 0.904047 | 1.84E-79 | -1.69E-46 |
| MS.gene059103 | MS.gene074109 | -0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene05912 | MS.gene074109 | 0.838805 | 2.31E-57 | -1.69E-46 |
| MS.gene05914 | MS.gene074109 | 0.871757 | 5.36E-67 | -1.69E-46 |
| MS.gene059181 | MS.gene074109 | 0.81042 | 1.16E-50 | -1.69E-46 |
| MS.gene059303 | MS.gene074109 | 0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene074109 | 0.812948 | 3.28E-51 | -1.69E-46 |
| MS.gene059480 | MS.gene074109 | -0.813894 | 2.03E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene074109 | 0.81244 | 4.23E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene074109 | 0.87913 | 1.60E-69 | -1.69E-46 |
| MS.gene059718 | MS.gene074109 | 0.860511 | 1.96E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene074109 | 0.882896 | 7.09E-71 | -1.69E-46 |
| MS.gene059801 | MS.gene074109 | 0.828582 | 8.30E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene074109 | 0.803308 | 3.71E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene074109 | 0.806271 | 8.92E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene074109 | 0.839119 | 1.92E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene074109 | 0.80562 | 1.22E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene074109 | 0.874379 | 7.07E-68 | -1.69E-46 |
| MS.gene06077 | MS.gene074109 | 0.897277 | 1.64E-76 | -1.69E-46 |
| MS.gene06092 | MS.gene074109 | 0.866085 | 3.69E-65 | -1.69E-46 |
| MS.gene060982 | MS.gene074109 | 0.838523 | 2.73E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene074109 | 0.874029 | 9.29E-68 | -1.69E-46 |
| MS.gene061231 | MS.gene074109 | 0.838791 | 2.33E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074109.t1 | MTR_6g023320 | 98.603 | 501 | 7 | 0 | 1 | 501 | 1 | 501 | 0.0 | 1027 |
| MS.gene074109.t1 | MTR_3g082690 | 29.167 | 312 | 194 | 9 | 65 | 371 | 65 | 354 | 4.40e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074109.t1 | AT5G14260 | 76.618 | 479 | 100 | 2 | 34 | 501 | 37 | 514 | 0.0 | 762 |
| MS.gene074109.t1 | AT5G14260 | 76.618 | 479 | 100 | 2 | 34 | 501 | 37 | 514 | 0.0 | 762 |
| MS.gene074109.t1 | AT5G14260 | 76.618 | 479 | 100 | 2 | 34 | 501 | 37 | 514 | 0.0 | 762 |
| MS.gene074109.t1 | AT5G14260 | 78.571 | 392 | 72 | 2 | 34 | 414 | 37 | 427 | 0.0 | 638 |
| MS.gene074109.t1 | AT3G07670 | 28.505 | 428 | 258 | 15 | 65 | 471 | 72 | 472 | 7.05e-30 | 122 |
| MS.gene074109.t1 | AT3G07670 | 29.360 | 344 | 201 | 13 | 149 | 471 | 12 | 334 | 8.36e-21 | 94.4 |
| MS.gene074109.t1 | AT3G55080 | 25.703 | 249 | 163 | 6 | 104 | 351 | 75 | 302 | 9.66e-15 | 77.0 |
| MS.gene074109.t1 | AT1G14030 | 23.797 | 395 | 259 | 14 | 102 | 479 | 79 | 448 | 1.77e-14 | 76.3 |
| MS.gene074109.t1 | AT3G55080 | 24.686 | 239 | 161 | 5 | 137 | 374 | 21 | 241 | 3.51e-14 | 74.7 |
| MS.gene074109.t1 | AT3G55080 | 24.686 | 239 | 161 | 5 | 137 | 374 | 21 | 241 | 3.51e-14 | 74.7 |
| MS.gene074109.t1 | AT3G55080 | 26.794 | 209 | 129 | 5 | 149 | 351 | 2 | 192 | 1.28e-12 | 69.7 |
Find 138 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTCTGGTTCTCTCTTTC+AGG | 0.134547 | 6.1:-6897683 | MS.gene074109:intron |
| AATTGGGTCCCCAGCTTTAT+AGG | 0.204769 | 6.1:+6896770 | None:intergenic |
| CCTTGAAGGAAGTCCGTTAA+AGG | 0.228930 | 6.1:-6897906 | MS.gene074109:intron |
| CTTTCTGGTATCCATACATT+AGG | 0.259833 | 6.1:-6898006 | MS.gene074109:CDS |
| CTCATCACGCTTCTTCTTAC+CGG | 0.277714 | 6.1:+6901938 | None:intergenic |
| AACAGGGAAAGAAATCTTTC+TGG | 0.279284 | 6.1:-6898021 | MS.gene074109:CDS |
| GTCATGTGTCGTGCATTTAC+AGG | 0.279302 | 6.1:-6897499 | MS.gene074109:intron |
| ACATAGCCTAAACGCATATA+TGG | 0.296655 | 6.1:+6896268 | None:intergenic |
| TGAGTAGCAACTCGCCTCTT+TGG | 0.296848 | 6.1:+6895679 | None:intergenic |
| TGCTGCTAGTGAAGATCTTC+AGG | 0.305187 | 6.1:-6901805 | MS.gene074109:intron |
| ACAAAGTTACTTACAAACTA+TGG | 0.310162 | 6.1:-6896619 | MS.gene074109:CDS |
| TCTTCGCCGGCGACGGTGAT+TGG | 0.325371 | 6.1:+6902004 | None:intergenic |
| TTTAGGATGAAATTGTTAAA+AGG | 0.332675 | 6.1:-6897753 | MS.gene074109:intron |
| ATTGGGTCCCCAGCTTTATA+GGG | 0.333639 | 6.1:+6896771 | None:intergenic |
| GAGATTTGCGCTGGTTCCAC+TGG | 0.336651 | 6.1:-6896877 | MS.gene074109:CDS |
| TTGTATGGAGCGGGCCGTGC+TGG | 0.337227 | 6.1:-6895867 | MS.gene074109:CDS |
| GAATTATACCAGACAACAAT+TGG | 0.338259 | 6.1:+6896753 | None:intergenic |
| TCCACTGGGACCTCCTTTGT+TGG | 0.338557 | 6.1:-6896862 | MS.gene074109:CDS |
| AACTTGATCGGCAACGAGGC+AGG | 0.340595 | 6.1:-6897982 | MS.gene074109:CDS |
| TTTGTAAGTAACTTTGTGTT+AGG | 0.341323 | 6.1:+6896625 | None:intergenic |
| AGAATAGTTGCTCAAAGAAA+TGG | 0.361210 | 6.1:-6896439 | MS.gene074109:CDS |
| AGAGTGACAACCAAGGAGTT+TGG | 0.364035 | 6.1:+6899380 | None:intergenic |
| GCCTCGGTAGGAAGGTCATA+TGG | 0.364413 | 6.1:+6897564 | None:intergenic |
| AATGCTTCATGCATGCTTGC+AGG | 0.371246 | 6.1:-6895635 | MS.gene074109:CDS |
| CTTGGCTGAAGATGAATCTA+TGG | 0.379159 | 6.1:-6895795 | MS.gene074109:intron |
| CAAGGCCAAGCACGCCAATT+CGG | 0.391381 | 6.1:+6898063 | None:intergenic |
| GTGGAGAGTGAGAGAAATGC+GGG | 0.398625 | 6.1:+6902026 | None:intergenic |
| TCATCTTCAGCCAAGGTAGT+AGG | 0.399117 | 6.1:+6895803 | None:intergenic |
| GCAACGAGGCAGGGGTCAAC+TGG | 0.400117 | 6.1:-6897972 | MS.gene074109:CDS |
| CTCAACTATGAGTCGGTCAT+TGG | 0.401678 | 6.1:+6896576 | None:intergenic |
| CAGTGGAATCACCTCTTCTA+TGG | 0.403764 | 6.1:-6897949 | MS.gene074109:CDS |
| TTTCTGGTATCCATACATTA+GGG | 0.404362 | 6.1:-6898005 | MS.gene074109:CDS |
| CCTTTAACGGACTTCCTTCA+AGG | 0.406337 | 6.1:+6897906 | None:intergenic |
| CTAGCAGCAACATAATGAAT+AGG | 0.415893 | 6.1:+6901819 | None:intergenic |
| AGCACGGCCCGCTCCATACA+AGG | 0.421155 | 6.1:+6895869 | None:intergenic |
| AACGAAGGTGCATAGGGAGC+AGG | 0.425799 | 6.1:+6895562 | None:intergenic |
| GACAAACTTACAGGACAAAC+TGG | 0.432900 | 6.1:+6896202 | None:intergenic |
| GAGTTGCTACTCAACTTGTT+AGG | 0.436655 | 6.1:-6895669 | MS.gene074109:CDS |
| TGCATGCTTGCAGGCAATCA+TGG | 0.440668 | 6.1:-6895626 | MS.gene074109:CDS |
| GTCGATCGCCCCTATAAAGC+TGG | 0.441415 | 6.1:-6896780 | MS.gene074109:CDS |
| GCTTGTTTGAAAATCTCAAA+TGG | 0.441814 | 6.1:+6897537 | None:intergenic |
| ATTCTCAGTTCCAAACTCCT+TGG | 0.446759 | 6.1:-6899390 | MS.gene074109:CDS |
| GGCTGCCTACCCTACTACCT+TGG | 0.447220 | 6.1:-6895813 | MS.gene074109:CDS |
| ATCTTGGTGCAGGTGTATGC+TGG | 0.447730 | 6.1:-6896322 | MS.gene074109:intron |
| ATGATTCCATATATGCGTTT+AGG | 0.447991 | 6.1:-6896274 | MS.gene074109:CDS |
| GAAATTGTTAAAAGGATTGA+AGG | 0.453798 | 6.1:-6897745 | MS.gene074109:CDS |
| ACTTGATCGGCAACGAGGCA+GGG | 0.464265 | 6.1:-6897981 | MS.gene074109:CDS |
| CGGTGTGATAAGGAAGAAGA+GGG | 0.467515 | 6.1:+6902053 | None:intergenic |
| GACACGGTCTGGTTTATGTC+TGG | 0.469437 | 6.1:-6897697 | MS.gene074109:CDS |
| AGTAACTTTGTGTTAGGCTG+TGG | 0.469997 | 6.1:+6896631 | None:intergenic |
| ATACACTGTGGTCTGGTAGC+TGG | 0.476237 | 6.1:+6895593 | None:intergenic |
| TGCGGGGAGACGGTGTGATA+AGG | 0.476262 | 6.1:+6902043 | None:intergenic |
| GAGAGGTGGAAAACCTTTAA+CGG | 0.479137 | 6.1:+6897893 | None:intergenic |
| CGATCAAGTTCCCTAATGTA+TGG | 0.481038 | 6.1:+6897995 | None:intergenic |
| GTCACTCTAGAACGTGTCTT+GGG | 0.482990 | 6.1:-6899365 | MS.gene074109:CDS |
| CTTAGCTCGGAGATTTGCGC+TGG | 0.483753 | 6.1:-6896886 | MS.gene074109:CDS |
| TCTGAGCTGACATACCTTGA+AGG | 0.486909 | 6.1:-6897920 | MS.gene074109:CDS |
| CTGGGGACCCAATTGTTGTC+TGG | 0.487242 | 6.1:-6896761 | MS.gene074109:intron |
| TTGCTGATTATTTCAATACT+CGG | 0.488231 | 6.1:-6895838 | MS.gene074109:CDS |
| AGGCAGGGGTCAACTGGCAG+TGG | 0.495241 | 6.1:-6897966 | MS.gene074109:CDS |
| GGTGAGCCCTTGTATGGAGC+GGG | 0.495741 | 6.1:-6895876 | MS.gene074109:CDS |
| GATACGTTAGTTGCCGCAAC+CGG | 0.498618 | 6.1:-6901957 | MS.gene074109:CDS |
| ACGCTTCTTCTTACCGGTTG+CGG | 0.498984 | 6.1:+6901944 | None:intergenic |
| TGATTATTTCAATACTCGGC+TGG | 0.503172 | 6.1:-6895834 | MS.gene074109:CDS |
| ATAATGAACTAGACACGGTC+TGG | 0.508550 | 6.1:-6897708 | MS.gene074109:CDS |
| TCGCCGGCGACGGTGATTGG+TGG | 0.509320 | 6.1:+6902007 | None:intergenic |
| CCTCGGTAGGAAGGTCATAT+GGG | 0.514764 | 6.1:+6897565 | None:intergenic |
| ACGGTGTGATAAGGAAGAAG+AGG | 0.517764 | 6.1:+6902052 | None:intergenic |
| CAATTCGGAAAACTTGTTTG+TGG | 0.518190 | 6.1:+6898078 | None:intergenic |
| CTTGATCGGCAACGAGGCAG+GGG | 0.523191 | 6.1:-6897980 | MS.gene074109:CDS |
| AACTAACGTATCGGAATTCG+AGG | 0.529425 | 6.1:+6901968 | None:intergenic |
| GCGATGTTAACTGCTGTTGA+TGG | 0.531972 | 6.1:-6896819 | MS.gene074109:CDS |
| AGATTTGCGCTGGTTCCACT+GGG | 0.533174 | 6.1:-6896876 | MS.gene074109:CDS |
| GGTGCATAGGGAGCAGGGCA+TGG | 0.533514 | 6.1:+6895568 | None:intergenic |
| GTGAGAGAAATGCGGGGAGA+CGG | 0.534248 | 6.1:+6902033 | None:intergenic |
| CATCTTCAGCCAAGGTAGTA+GGG | 0.534848 | 6.1:+6895804 | None:intergenic |
| CTTGTTTGTGGTCAATAGCT+CGG | 0.535200 | 6.1:+6898090 | None:intergenic |
| GTCTTGGGAAACGAGACTAT+TGG | 0.536024 | 6.1:-6899350 | MS.gene074109:intron |
| AATTATACCAGACAACAATT+GGG | 0.539165 | 6.1:+6896754 | None:intergenic |
| TCTTTCAAAACAACTTTGCA+CGG | 0.539201 | 6.1:+6901870 | None:intergenic |
| CATGGCGATACACTGTGGTC+TGG | 0.540057 | 6.1:+6895586 | None:intergenic |
| ATCAGAATGTTAGCTTAGCT+CGG | 0.542340 | 6.1:-6896899 | MS.gene074109:intron |
| AGGTGTATGCTGGGAAGGAA+AGG | 0.544050 | 6.1:-6896312 | MS.gene074109:CDS |
| TGTCACTCTAGAACGTGTCT+TGG | 0.546896 | 6.1:-6899366 | MS.gene074109:CDS |
| GTAACTTTGTGTTAGGCTGT+GGG | 0.552531 | 6.1:+6896632 | None:intergenic |
| ATGGAAAAGCCTCGGTAGGA+AGG | 0.552629 | 6.1:+6897556 | None:intergenic |
| GGTGTATGCTGGGAAGGAAA+GGG | 0.552682 | 6.1:-6896311 | MS.gene074109:CDS |
| CGGAACAGAAACTTCTTCGC+CGG | 0.553850 | 6.1:+6901991 | None:intergenic |
| TTTCTCATACATCAGATACA+AGG | 0.555037 | 6.1:+6898045 | None:intergenic |
| TGATGGTGCTGTTCAGCTTG+TGG | 0.555187 | 6.1:-6896802 | MS.gene074109:CDS |
| CAATCTGTCATCTCCTCTCA+AGG | 0.555385 | 6.1:-6896226 | MS.gene074109:CDS |
| TATGCACCTTCGTTAAAATG+AGG | 0.557153 | 6.1:-6895553 | None:intergenic |
| TCGATCGCCCCTATAAAGCT+GGG | 0.559697 | 6.1:-6896779 | MS.gene074109:CDS |
| AAGACGTGGATGCATAAGAA+TGG | 0.560806 | 6.1:-6901900 | MS.gene074109:CDS |
| AGAAACTTCTTCGCCGGCGA+CGG | 0.562443 | 6.1:+6901997 | None:intergenic |
| TATTGAAATAATCAGCAAGC+TGG | 0.569014 | 6.1:+6895843 | None:intergenic |
| TTCAGCCAAGGTAGTAGGGT+AGG | 0.574842 | 6.1:+6895808 | None:intergenic |
| TTAAGACTATCATCAAGAGA+AGG | 0.580886 | 6.1:+6901843 | None:intergenic |
| GTATCATCTTAGTTGACAGA+TGG | 0.581818 | 6.1:-6895712 | MS.gene074109:intron |
| AATCTCAAATGGAAAAGCCT+CGG | 0.583381 | 6.1:+6897548 | None:intergenic |
| TCTCCACCAATCACCGTCGC+CGG | 0.587265 | 6.1:-6902010 | MS.gene074109:CDS |
| ACGAAGGTGCATAGGGAGCA+GGG | 0.590886 | 6.1:+6895563 | None:intergenic |
| ATGACAGATTGCATCTCAGA+AGG | 0.592263 | 6.1:+6896238 | None:intergenic |
| AGGACAAACTGGACCTTGAG+AGG | 0.592723 | 6.1:+6896213 | None:intergenic |
| TTGGGTCCCCAGCTTTATAG+GGG | 0.594409 | 6.1:+6896772 | None:intergenic |
| GGTGGAGAGTGAGAGAAATG+CGG | 0.597082 | 6.1:+6902025 | None:intergenic |
| GGCCTACTGTAGCAACTGCA+AGG | 0.600477 | 6.1:-6896841 | MS.gene074109:CDS |
| CATACATTAGGGAACTTGAT+CGG | 0.603091 | 6.1:-6897994 | MS.gene074109:CDS |
| CATAGATTCATCTTCAGCCA+AGG | 0.604077 | 6.1:+6895796 | None:intergenic |
| AGGTGAGCCCTTGTATGGAG+CGG | 0.605446 | 6.1:-6895877 | MS.gene074109:CDS |
| CGCCTTGCAGTTGCTACAGT+AGG | 0.606441 | 6.1:+6896839 | None:intergenic |
| ATTATACCTCAACTATGAGT+CGG | 0.607205 | 6.1:+6896569 | None:intergenic |
| TCTTGGTGCAGGTGTATGCT+GGG | 0.610217 | 6.1:-6896321 | MS.gene074109:intron |
| GCACGGCCCGCTCCATACAA+GGG | 0.611326 | 6.1:+6895870 | None:intergenic |
| AAGAAGCGTGATGAGGATGA+TGG | 0.615931 | 6.1:-6901930 | MS.gene074109:CDS |
| GGTGCAGGTGTATGCTGGGA+AGG | 0.617505 | 6.1:-6896317 | MS.gene074109:intron |
| ATCAGCAAGCTGGTCCAGCA+CGG | 0.617570 | 6.1:+6895853 | None:intergenic |
| TCAAATGGAAAAGCCTCGGT+AGG | 0.619277 | 6.1:+6897552 | None:intergenic |
| CTACAGTAGGCCAACAAAGG+AGG | 0.629292 | 6.1:+6896852 | None:intergenic |
| TCAGACTCTGACCATAGAAG+AGG | 0.635719 | 6.1:+6897938 | None:intergenic |
| TTGCTACAGTAGGCCAACAA+AGG | 0.639295 | 6.1:+6896849 | None:intergenic |
| GGTTGCGGCAACTAACGTAT+CGG | 0.642096 | 6.1:+6901959 | None:intergenic |
| GTGTGATAAGGAAGAAGAGG+GGG | 0.642889 | 6.1:+6902055 | None:intergenic |
| CGGTAAGAAGAAGCGTGATG+AGG | 0.645376 | 6.1:-6901937 | MS.gene074109:CDS |
| CCCATATGACCTTCCTACCG+AGG | 0.652073 | 6.1:-6897565 | MS.gene074109:CDS |
| GGTGTGATAAGGAAGAAGAG+GGG | 0.652134 | 6.1:+6902054 | None:intergenic |
| CAATGACCGACTCATAGTTG+AGG | 0.654098 | 6.1:-6896575 | MS.gene074109:intron |
| GCCAACAAAGGAGGTCCCAG+TGG | 0.657204 | 6.1:+6896861 | None:intergenic |
| CGATCGCCCCTATAAAGCTG+GGG | 0.666794 | 6.1:-6896778 | MS.gene074109:CDS |
| TGGAGAGTGAGAGAAATGCG+GGG | 0.668520 | 6.1:+6902027 | None:intergenic |
| AGAGTATAATGAACTAGACA+CGG | 0.678509 | 6.1:-6897713 | MS.gene074109:CDS |
| ATGGCAGTTTGAATCCAAAG+AGG | 0.690838 | 6.1:-6895693 | MS.gene074109:CDS |
| ATGATGGTGATTTGAAGACG+TGG | 0.695049 | 6.1:-6901914 | MS.gene074109:CDS |
| TTCAAAACAACTTTGCACGG+AGG | 0.701498 | 6.1:+6901873 | None:intergenic |
| CAGGGCATGGCGATACACTG+TGG | 0.732803 | 6.1:+6895581 | None:intergenic |
| AGGGAACTTGATCGGCAACG+AGG | 0.736804 | 6.1:-6897986 | MS.gene074109:CDS |
| TAACGTATCGGAATTCGAGG+CGG | 0.739588 | 6.1:+6901971 | None:intergenic |
| ACGTTCTAGAGTGACAACCA+AGG | 0.742745 | 6.1:+6899373 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATTTAATTGATTGT+TGG | - | chr6.1:6900421-6900440 | MS.gene074109:intron | 10.0% |
| !! | AAATTAGAATGAATAAATTT+AGG | + | chr6.1:6900399-6900418 | None:intergenic | 10.0% |
| !! | CTAATATAATATAATTAAAC+GGG | - | chr6.1:6901720-6901739 | MS.gene074109:intron | 10.0% |
| !! | TAATATAATATAATTAAACG+GGG | - | chr6.1:6901721-6901740 | MS.gene074109:intron | 10.0% |
| !!! | TTAGATAAAAAATATTTTGA+TGG | - | chr6.1:6899246-6899265 | MS.gene074109:intron | 10.0% |
| !! | AAAATCAATTATACTATAGA+GGG | - | chr6.1:6896447-6896466 | MS.gene074109:CDS | 15.0% |
| !! | AAAATGAATGTAAACATATA+TGG | + | chr6.1:6898533-6898552 | None:intergenic | 15.0% |
| !! | AATAAATAATCAATCATAGA+AGG | + | chr6.1:6898565-6898584 | None:intergenic | 15.0% |
| !! | TTAAAAAATGATTACAACAT+AGG | - | chr6.1:6897747-6897766 | MS.gene074109:CDS | 15.0% |
| !! | TTAAAATGTTTATATACGTA+AGG | - | chr6.1:6898800-6898819 | MS.gene074109:intron | 15.0% |
| !!! | AAAAGATTTAATACTTTTGA+TGG | - | chr6.1:6898930-6898949 | MS.gene074109:intron | 15.0% |
| !!! | AAAGATTTAATACTTTTGAT+GGG | - | chr6.1:6898931-6898950 | MS.gene074109:intron | 15.0% |
| !!! | AAATTCTAGATTTTGATATT+TGG | + | chr6.1:6901536-6901555 | None:intergenic | 15.0% |
| !!! | AATATGATGAGTTTTTTTTT+TGG | + | chr6.1:6897187-6897206 | None:intergenic | 15.0% |
| !!! | AATGAGACATTTTTATATAT+GGG | - | chr6.1:6897502-6897521 | MS.gene074109:CDS | 15.0% |
| !!! | AATGAGACATTTTTATTATA+TGG | - | chr6.1:6897393-6897412 | MS.gene074109:intron | 15.0% |
| !!! | ACTTGATTTTATTAATATCT+AGG | + | chr6.1:6901561-6901580 | None:intergenic | 15.0% |
| !!! | ATGAGACATTTTTATTATAT+GGG | - | chr6.1:6897394-6897413 | MS.gene074109:intron | 15.0% |
| !!! | CTATTTTTAGAAAAAGATTA+AGG | + | chr6.1:6901687-6901706 | None:intergenic | 15.0% |
| !!! | GTAAATTAGTTTAAGTTTAT+TGG | - | chr6.1:6897123-6897142 | MS.gene074109:intron | 15.0% |
| !!! | TAAATTGATTGATTGTTTTT+TGG | - | chr6.1:6900742-6900761 | MS.gene074109:intron | 15.0% |
| !!! | TAACTTAGTTTTGAATTTAA+TGG | - | chr6.1:6896793-6896812 | MS.gene074109:CDS | 15.0% |
| !!! | TCACATTTTTTTTGTAATAA+TGG | + | chr6.1:6898390-6898409 | None:intergenic | 15.0% |
| !!! | TTCAAAGTATTGTTATATAT+AGG | - | chr6.1:6899149-6899168 | MS.gene074109:intron | 15.0% |
| !! | AAACTCTTAATCTTAATTGA+AGG | - | chr6.1:6901285-6901304 | MS.gene074109:intron | 20.0% |
| !! | AAATAAATATTCCATCCTAA+TGG | + | chr6.1:6899005-6899024 | None:intergenic | 20.0% |
| !! | AATATATTAAGACTAACTTC+TGG | - | chr6.1:6899880-6899899 | MS.gene074109:intron | 20.0% |
| !! | ATATAATTGAGTGTAATCAT+AGG | - | chr6.1:6896540-6896559 | MS.gene074109:intron | 20.0% |
| !! | ATGAAATATAAGTGATTGAA+TGG | - | chr6.1:6897259-6897278 | MS.gene074109:intron | 20.0% |
| !! | ATTTAATTGATTGTTGGATT+GGG | - | chr6.1:6900427-6900446 | MS.gene074109:intron | 20.0% |
| !! | CAAAATCAATTATACTATAG+AGG | - | chr6.1:6896446-6896465 | MS.gene074109:CDS | 20.0% |
| !! | CATGATAGTATGAATTAAAA+TGG | - | chr6.1:6898454-6898473 | MS.gene074109:intron | 20.0% |
| !! | CTAATAATGATTTCATCAAT+TGG | + | chr6.1:6900275-6900294 | None:intergenic | 20.0% |
| !! | TAAATCTTTGTTAATGAGTT+TGG | - | chr6.1:6898223-6898242 | MS.gene074109:intron | 20.0% |
| !! | TAACCTTGAATTCATTTATA+AGG | - | chr6.1:6899396-6899415 | MS.gene074109:CDS | 20.0% |
| !! | TATTTAATTGATTGTTGGAT+TGG | - | chr6.1:6900426-6900445 | MS.gene074109:intron | 20.0% |
| !! | TGATTCTGTAAAATTGATAT+TGG | - | chr6.1:6896312-6896331 | MS.gene074109:CDS | 20.0% |
| !! | TGTATATTACATGAGTTTAA+CGG | + | chr6.1:6897842-6897861 | None:intergenic | 20.0% |
| !! | TTAATTTCTTAGTTCAATCT+TGG | - | chr6.1:6901327-6901346 | MS.gene074109:intron | 20.0% |
| !! | TTATGATACACTTAAACTTT+AGG | - | chr6.1:6900358-6900377 | MS.gene074109:intron | 20.0% |
| !! | TTCAAGTAGAATCAATTATA+GGG | - | chr6.1:6896422-6896441 | MS.gene074109:CDS | 20.0% |
| !!! | ATTCTTTTATCTTGATATTG+TGG | + | chr6.1:6901211-6901230 | None:intergenic | 20.0% |
| !!! | ATTCTTTTCCTTATAAACTT+TGG | - | chr6.1:6900554-6900573 | MS.gene074109:intron | 20.0% |
| !!! | ATTTTCAGTGAATGTAAAAA+TGG | - | chr6.1:6898176-6898195 | MS.gene074109:intron | 20.0% |
| !!! | ATTTTTATATATGGGTCTAA+TGG | - | chr6.1:6897510-6897529 | MS.gene074109:CDS | 20.0% |
| !!! | CATCCTTATTTAAAATTAGA+TGG | + | chr6.1:6900952-6900971 | None:intergenic | 20.0% |
| !!! | GAATGAGACATTTTTATATA+TGG | - | chr6.1:6897501-6897520 | MS.gene074109:CDS | 20.0% |
| !!! | GATAAAAAATATTTTGATGG+TGG | - | chr6.1:6899249-6899268 | MS.gene074109:intron | 20.0% |
| !!! | GCAATATCATGATTTTTTAT+TGG | + | chr6.1:6897612-6897631 | None:intergenic | 20.0% |
| !!! | GTAAATAGTTTTGAGTTTAA+TGG | - | chr6.1:6897550-6897569 | MS.gene074109:CDS | 20.0% |
| !!! | GTATAATTTTGTCATTTACT+TGG | - | chr6.1:6901112-6901131 | MS.gene074109:intron | 20.0% |
| !!! | GTTTAAAACTAAGAGAAAAT+AGG | + | chr6.1:6898068-6898087 | None:intergenic | 20.0% |
| !!! | GTTTACATTCATTTTTAAGT+TGG | - | chr6.1:6898538-6898557 | MS.gene074109:intron | 20.0% |
| !!! | TAAACCTTTTTGAATTTACT+AGG | - | chr6.1:6898897-6898916 | MS.gene074109:intron | 20.0% |
| !!! | TCATTAGTTTTAGAGTTTAA+TGG | - | chr6.1:6897890-6897909 | MS.gene074109:intron | 20.0% |
| !!! | TGTAGTTATTTTTGTATTAG+TGG | - | chr6.1:6900970-6900989 | MS.gene074109:intron | 20.0% |
| !!! | TTACTCTTATCATTCATTTT+AGG | - | chr6.1:6901768-6901787 | MS.gene074109:intron | 20.0% |
| !!! | TTGATTTTATAACACTATGA+TGG | - | chr6.1:6898592-6898611 | MS.gene074109:intron | 20.0% |
| !!! | TTTAGGATGAAATTGTTAAA+AGG | - | chr6.1:6899912-6899931 | MS.gene074109:intron | 20.0% |
| !!! | TTTTTATTATATGGGTCTAA+TGG | - | chr6.1:6897402-6897421 | MS.gene074109:intron | 20.0% |
| !!! | TTTTTGTTATATGTGTCTAA+TGG | - | chr6.1:6897083-6897102 | MS.gene074109:intron | 20.0% |
| ! | AAAATCACCTTAATCTGAAA+CGG | - | chr6.1:6900326-6900345 | MS.gene074109:intron | 25.0% |
| ! | AAGAAAGCAAAATATGACAT+AGG | + | chr6.1:6901606-6901625 | None:intergenic | 25.0% |
| ! | AATTATACCAGACAACAATT+GGG | + | chr6.1:6900914-6900933 | None:intergenic | 25.0% |
| ! | ACAAAGTTACTTACAAACTA+TGG | - | chr6.1:6901046-6901065 | MS.gene074109:intron | 25.0% |
| ! | ACAACTATCCAAAGTTTATA+AGG | + | chr6.1:6900565-6900584 | None:intergenic | 25.0% |
| ! | ACTCATTAACAAAGATTTAG+AGG | + | chr6.1:6898222-6898241 | None:intergenic | 25.0% |
| ! | ATGTTGTATTGAAGTTGTTT+GGG | - | chr6.1:6899321-6899340 | MS.gene074109:intron | 25.0% |
| ! | ATTGAATAAAACCACCAAAA+TGG | - | chr6.1:6896954-6896973 | MS.gene074109:intron | 25.0% |
| ! | ATTTAATGGAGATTCAATGT+CGG | - | chr6.1:6896807-6896826 | MS.gene074109:CDS | 25.0% |
| ! | CATTTATAAGGCAATGTAAA+GGG | - | chr6.1:6899408-6899427 | MS.gene074109:intron | 25.0% |
| ! | CTTCAAGTAGAATCAATTAT+AGG | - | chr6.1:6896421-6896440 | MS.gene074109:CDS | 25.0% |
| ! | GAAAACTCCAAAGTATATAA+TGG | - | chr6.1:6900240-6900259 | MS.gene074109:intron | 25.0% |
| ! | GAAATTGTTAAAAGGATTGA+AGG | - | chr6.1:6899920-6899939 | MS.gene074109:intron | 25.0% |
| ! | GCATTGTAAATAGAGAAAAA+AGG | - | chr6.1:6897654-6897673 | MS.gene074109:intron | 25.0% |
| ! | TCAAGTAGAATCAATTATAG+GGG | - | chr6.1:6896423-6896442 | MS.gene074109:CDS | 25.0% |
| ! | TCATTTATAAGGCAATGTAA+AGG | - | chr6.1:6899407-6899426 | MS.gene074109:CDS | 25.0% |
| ! | TCTCAAATTATTATCTGTGT+CGG | + | chr6.1:6896515-6896534 | None:intergenic | 25.0% |
| ! | TTAACAAAGATTTAGAGGAT+AGG | + | chr6.1:6898217-6898236 | None:intergenic | 25.0% |
| ! | TTCTCCTAGTAAATTCAAAA+AGG | + | chr6.1:6898904-6898923 | None:intergenic | 25.0% |
| ! | TTGAATTAAATAGTGTATCG+CGG | + | chr6.1:6899134-6899153 | None:intergenic | 25.0% |
| ! | TTGCCTTATAAATGAATTCA+AGG | + | chr6.1:6899402-6899421 | None:intergenic | 25.0% |
| ! | TTTACATTAGGAATTGAATG+AGG | - | chr6.1:6896726-6896745 | MS.gene074109:intron | 25.0% |
| ! | TTTGTAAGTAACTTTGTGTT+AGG | + | chr6.1:6901043-6901062 | None:intergenic | 25.0% |
| !! | AATGTTACATGCTTTTACAA+TGG | - | chr6.1:6897364-6897383 | MS.gene074109:intron | 25.0% |
| !! | AGAAAAGAAGAAGTGATTTT+CGG | + | chr6.1:6895583-6895602 | None:intergenic | 25.0% |
| !! | GCACCATCTAATTTTAAATA+AGG | - | chr6.1:6900946-6900965 | MS.gene074109:intron | 25.0% |
| !! | TCTAAAACTAATGAGAAAAG+GGG | + | chr6.1:6897884-6897903 | None:intergenic | 25.0% |
| !! | TTGCTGATTATTTCAATACT+CGG | - | chr6.1:6901827-6901846 | MS.gene074109:CDS | 25.0% |
| !!! | ACTCTAAAACTAATGAGAAA+AGG | + | chr6.1:6897886-6897905 | None:intergenic | 25.0% |
| !!! | CTCTAAAACTAATGAGAAAA+GGG | + | chr6.1:6897885-6897904 | None:intergenic | 25.0% |
| !!! | GATTTTTTTCAATTCCTACT+TGG | - | chr6.1:6899432-6899451 | MS.gene074109:intron | 25.0% |
| !!! | TTCATAGATTTTGACATGTT+TGG | + | chr6.1:6896474-6896493 | None:intergenic | 25.0% |
| !!! | TTTTTGTTATTCGAGTCTAA+TGG | - | chr6.1:6896751-6896770 | MS.gene074109:intron | 25.0% |
| AAATTCCTCAAATTCAGACA+AGG | + | chr6.1:6901505-6901524 | None:intergenic | 30.0% | |
| AACATAACCCCATATTTGTT+AGG | + | chr6.1:6898144-6898163 | None:intergenic | 30.0% | |
| AATGTCAATGTAAAGTGCAA+GGG | - | chr6.1:6898622-6898641 | MS.gene074109:intron | 30.0% | |
| ACACTATTCTTATTGGATGT+TGG | + | chr6.1:6897714-6897733 | None:intergenic | 30.0% | |
| AGAATAGTTGCTCAAAGAAA+TGG | - | chr6.1:6901226-6901245 | MS.gene074109:intron | 30.0% | |
| AGAGTATAATGAACTAGACA+CGG | - | chr6.1:6899952-6899971 | MS.gene074109:intron | 30.0% | |
| ATATTAAGACTAACTTCTGG+TGG | - | chr6.1:6899883-6899902 | MS.gene074109:intron | 30.0% | |
| ATGATTCCATATATGCGTTT+AGG | - | chr6.1:6901391-6901410 | MS.gene074109:intron | 30.0% | |
| ATGTCAAAATCTATGAAGCA+CGG | - | chr6.1:6896477-6896496 | MS.gene074109:CDS | 30.0% | |
| ATTATACCTCAACTATGAGT+CGG | + | chr6.1:6901099-6901118 | None:intergenic | 30.0% | |
| CATGTTACATACTTCTACAA+GGG | - | chr6.1:6897473-6897492 | MS.gene074109:intron | 30.0% | |
| CCATCTGCTACATATTTATA+GGG | - | chr6.1:6900199-6900218 | MS.gene074109:intron | 30.0% | |
| CCTATAAATATGTAGCAGAT+GGG | + | chr6.1:6900201-6900220 | None:intergenic | 30.0% | |
| CTAAAACTAATGAGAAAAGG+GGG | + | chr6.1:6897883-6897902 | None:intergenic | 30.0% | |
| CTGATGTATGAGAAAAAACA+GGG | - | chr6.1:6899628-6899647 | MS.gene074109:intron | 30.0% | |
| GAATTATACCAGACAACAAT+TGG | + | chr6.1:6900915-6900934 | None:intergenic | 30.0% | |
| GATGTTGTATTGAAGTTGTT+TGG | - | chr6.1:6899320-6899339 | MS.gene074109:intron | 30.0% | |
| GCTTGTTTGAAAATCTCAAA+TGG | + | chr6.1:6900131-6900150 | None:intergenic | 30.0% | |
| GGTTTGATCATGGAATATAA+TGG | + | chr6.1:6900590-6900609 | None:intergenic | 30.0% | |
| TAAATTATTGCTAGTCAGTG+TGG | + | chr6.1:6897240-6897259 | None:intergenic | 30.0% | |
| TAATGTCAATGTAAAGTGCA+AGG | - | chr6.1:6898621-6898640 | MS.gene074109:intron | 30.0% | |
| TAATGTTGTTCTCTTATCAC+TGG | + | chr6.1:6898783-6898802 | None:intergenic | 30.0% | |
| TATGAATTGTTGTCGAATAG+CGG | - | chr6.1:6899068-6899087 | MS.gene074109:intron | 30.0% | |
| TATGCTTGTGGAAATGAATA+TGG | - | chr6.1:6899365-6899384 | MS.gene074109:CDS | 30.0% | |
| TATTGAAATAATCAGCAAGC+TGG | + | chr6.1:6901825-6901844 | None:intergenic | 30.0% | |
| TCAGAAACCCTAACAAATAT+GGG | - | chr6.1:6898133-6898152 | MS.gene074109:intron | 30.0% | |
| TCTGATGTATGAGAAAAAAC+AGG | - | chr6.1:6899627-6899646 | MS.gene074109:intron | 30.0% | |
| TCTTTCAAAACAACTTTGCA+CGG | + | chr6.1:6895798-6895817 | None:intergenic | 30.0% | |
| TGAATCTTAAGGTTTGATCA+TGG | + | chr6.1:6900600-6900619 | None:intergenic | 30.0% | |
| TGTTTATATACGTAAGGACT+AGG | - | chr6.1:6898806-6898825 | MS.gene074109:intron | 30.0% | |
| TTAAGACTATCATCAAGAGA+AGG | + | chr6.1:6895825-6895844 | None:intergenic | 30.0% | |
| TTCAGAAACCCTAACAAATA+TGG | - | chr6.1:6898132-6898151 | MS.gene074109:intron | 30.0% | |
| TTGGCAAAAAAATGTGTTGA+AGG | - | chr6.1:6896331-6896350 | MS.gene074109:intron | 30.0% | |
| TTTCTCATACATCAGATACA+AGG | + | chr6.1:6899623-6899642 | None:intergenic | 30.0% | |
| ! | ACATAACCCCATATTTGTTA+GGG | + | chr6.1:6898143-6898162 | None:intergenic | 30.0% |
| ! | GGTGTAAAACTAGTTTACAT+TGG | + | chr6.1:6897693-6897712 | None:intergenic | 30.0% |
| ! | GTAAAACTAGTTTACATTGG+CGG | + | chr6.1:6897690-6897709 | None:intergenic | 30.0% |
| ! | TAATTGATTCTACTTGAAGC+TGG | + | chr6.1:6896420-6896439 | None:intergenic | 30.0% |
| ! | TATTTTCCCTATCAGTAACA+TGG | + | chr6.1:6899831-6899850 | None:intergenic | 30.0% |
| ! | TTTCTGGTATCCATACATTA+GGG | - | chr6.1:6899660-6899679 | MS.gene074109:intron | 30.0% |
| !! | AAAGTTGTGTTGATGATAGT+AGG | - | chr6.1:6899495-6899514 | MS.gene074109:intron | 30.0% |
| !! | GCAAGATTTAAAGCTTTTGA+TGG | - | chr6.1:6898963-6898982 | MS.gene074109:intron | 30.0% |
| !! | GTGCTACATAGTTTTACATT+AGG | - | chr6.1:6896714-6896733 | MS.gene074109:intron | 30.0% |
| !! | TACTTTTTGCATGTCACATT+TGG | - | chr6.1:6900298-6900317 | MS.gene074109:intron | 30.0% |
| !! | TTAATACTTTTGATGGGCAT+CGG | - | chr6.1:6898937-6898956 | MS.gene074109:intron | 30.0% |
| !!! | ATTTTTTGCTGACATCCAAT+AGG | - | chr6.1:6897936-6897955 | MS.gene074109:CDS | 30.0% |
| !!! | TCGGTTGTAAACTAGTTTTA+TGG | - | chr6.1:6896826-6896845 | MS.gene074109:CDS | 30.0% |
| AAAATCATACACTTCCCGTT+TGG | - | chr6.1:6896637-6896656 | MS.gene074109:CDS | 35.0% | |
| AAAATGGCGTGAAAACAACA+AGG | - | chr6.1:6898470-6898489 | MS.gene074109:intron | 35.0% | |
| AAAGATTTAGAGGATAGGCA+TGG | + | chr6.1:6898212-6898231 | None:intergenic | 35.0% | |
| AACAGGGAAAGAAATCTTTC+TGG | - | chr6.1:6899644-6899663 | MS.gene074109:intron | 35.0% | |
| AATCTATCAATCACTGACAC+CGG | - | chr6.1:6895926-6895945 | MS.gene074109:intron | 35.0% | |
| AATCTCAAATGGAAAAGCCT+CGG | + | chr6.1:6900120-6900139 | None:intergenic | 35.0% | |
| ACAAGGTGATGAGTTCTTAT+TGG | - | chr6.1:6897778-6897797 | MS.gene074109:intron | 35.0% | |
| ACATAGCCTAAACGCATATA+TGG | + | chr6.1:6901400-6901419 | None:intergenic | 35.0% | |
| ACCATTAAAGTGGGATGATT+TGG | - | chr6.1:6897982-6898001 | MS.gene074109:CDS | 35.0% | |
| AGATTTAACCTTACTGTCAC+AGG | - | chr6.1:6901165-6901184 | MS.gene074109:intron | 35.0% | |
| ATATCCAAGCATACGCAATA+TGG | + | chr6.1:6896259-6896278 | None:intergenic | 35.0% | |
| ATTGAAGTTGTTTGGGTGAT+CGG | - | chr6.1:6899328-6899347 | MS.gene074109:intron | 35.0% | |
| ATTGAATGGAACCATCGTAA+TGG | - | chr6.1:6897273-6897292 | MS.gene074109:intron | 35.0% | |
| CACACACACACTATTCTTAT+TGG | + | chr6.1:6897721-6897740 | None:intergenic | 35.0% | |
| CACTAAACATGATTAACCAC+AGG | + | chr6.1:6899286-6899305 | None:intergenic | 35.0% | |
| CAGAAACCCTAACAAATATG+GGG | - | chr6.1:6898134-6898153 | MS.gene074109:intron | 35.0% | |
| CATACATTAGGGAACTTGAT+CGG | - | chr6.1:6899671-6899690 | MS.gene074109:intron | 35.0% | |
| CATTGATGAACATGTCCATT+AGG | - | chr6.1:6898987-6899006 | MS.gene074109:intron | 35.0% | |
| CCACGTAATACCATTAAAGT+GGG | - | chr6.1:6897973-6897992 | MS.gene074109:CDS | 35.0% | |
| CCATGTTACATACTTCTACA+AGG | - | chr6.1:6897472-6897491 | MS.gene074109:intron | 35.0% | |
| CCCATCTGCTACATATTTAT+AGG | - | chr6.1:6900198-6900217 | MS.gene074109:intron | 35.0% | |
| CCCTATAAATATGTAGCAGA+TGG | + | chr6.1:6900202-6900221 | None:intergenic | 35.0% | |
| CTAGCAGCAACATAATGAAT+AGG | + | chr6.1:6895849-6895868 | None:intergenic | 35.0% | |
| CTGACACTGACATGTAAATA+TGG | - | chr6.1:6896109-6896128 | MS.gene074109:intron | 35.0% | |
| CTTCAAATCAAAGATGTGTC+AGG | + | chr6.1:6896689-6896708 | None:intergenic | 35.0% | |
| GTATCATCTTAGTTGACAGA+TGG | - | chr6.1:6901953-6901972 | MS.gene074109:CDS | 35.0% | |
| GTTTAATGGAGAAGTAGTGT+CGG | - | chr6.1:6897564-6897583 | MS.gene074109:CDS | 35.0% | |
| TAGTATACACACGAGTCATT+TGG | - | chr6.1:6900047-6900066 | MS.gene074109:intron | 35.0% | |
| TATCAGTATCTAAGTGTGTC+AGG | + | chr6.1:6896041-6896060 | None:intergenic | 35.0% | |
| TCCACGTAATACCATTAAAG+TGG | - | chr6.1:6897972-6897991 | MS.gene074109:CDS | 35.0% | |
| TGATTATTTCAATACTCGGC+TGG | - | chr6.1:6901831-6901850 | MS.gene074109:CDS | 35.0% | |
| TTACAATGCAGTTGCAAAGT+GGG | + | chr6.1:6897643-6897662 | None:intergenic | 35.0% | |
| TTCTGTTTAACACCATCTGT+TGG | + | chr6.1:6898756-6898775 | None:intergenic | 35.0% | |
| TTTACAATGCAGTTGCAAAG+TGG | + | chr6.1:6897644-6897663 | None:intergenic | 35.0% | |
| ! | AAAGGGGGTATGTAATGTAT+TGG | + | chr6.1:6897868-6897887 | None:intergenic | 35.0% |
| ! | ATCAGAATGTTAGCTTAGCT+CGG | - | chr6.1:6900766-6900785 | MS.gene074109:intron | 35.0% |
| ! | ATTAAAGTGGGATGATTTGG+CGG | - | chr6.1:6897985-6898004 | MS.gene074109:CDS | 35.0% |
| ! | ATTTCATCAATTGGTTAGCC+TGG | + | chr6.1:6900266-6900285 | None:intergenic | 35.0% |
| ! | CAATTCGGAAAACTTGTTTG+TGG | + | chr6.1:6899590-6899609 | None:intergenic | 35.0% |
| ! | CACAAACAAGTTTTCCGAAT+TGG | - | chr6.1:6899588-6899607 | MS.gene074109:intron | 35.0% |
| ! | CCTTGTAGAAGTATGTAACA+TGG | + | chr6.1:6897475-6897494 | None:intergenic | 35.0% |
| ! | CTAATGGACATGTTCATCAA+TGG | + | chr6.1:6898989-6899008 | None:intergenic | 35.0% |
| ! | CTTTCTGGTATCCATACATT+AGG | - | chr6.1:6899659-6899678 | MS.gene074109:intron | 35.0% |
| ! | GTTTAATGGATATGCTCTGT+CGG | - | chr6.1:6897904-6897923 | MS.gene074109:intron | 35.0% |
| !! | CATTTTAACGAAGGTGCATA+GGG | + | chr6.1:6902112-6902131 | None:intergenic | 35.0% |
| !! | GAGAAATAGTGGATTCCTAT+TGG | + | chr6.1:6897954-6897973 | None:intergenic | 35.0% |
| !! | GGTTTCTGAAATTGATGGTA+TGG | + | chr6.1:6898122-6898141 | None:intergenic | 35.0% |
| !! | GTTAGGGTTTCTGAAATTGA+TGG | + | chr6.1:6898127-6898146 | None:intergenic | 35.0% |
| !! | TATTTTGCTTTCTTGACTCG+AGG | - | chr6.1:6901612-6901631 | MS.gene074109:intron | 35.0% |
| !! | TCATTTTAACGAAGGTGCAT+AGG | + | chr6.1:6902113-6902132 | None:intergenic | 35.0% |
| !!! | CAGTGTGTCATTTTGTTGTT+TGG | - | chr6.1:6899464-6899483 | MS.gene074109:intron | 35.0% |
| !!! | GCACGATATTTTAGCACATA+TGG | - | chr6.1:6900507-6900526 | MS.gene074109:intron | 35.0% |
| !!! | GCTATAGTGTTGTTGTTTTG+TGG | - | chr6.1:6899173-6899192 | MS.gene074109:intron | 35.0% |
| AACTAACGTATCGGAATTCG+AGG | + | chr6.1:6895700-6895719 | None:intergenic | 40.0% | |
| AAGACGTGGATGCATAAGAA+TGG | - | chr6.1:6895765-6895784 | MS.gene074109:intron | 40.0% | |
| AAGTGGTGAGACAAACTTAC+AGG | + | chr6.1:6901475-6901494 | None:intergenic | 40.0% | |
| ACACCCATTGTTGAAAGAGA+GGG | + | chr6.1:6900723-6900742 | None:intergenic | 40.0% | |
| ACCAAGTCCATGTTACTGAT+AGG | - | chr6.1:6899821-6899840 | MS.gene074109:intron | 40.0% | |
| ACCTGAAGATGATCAACTAC+AGG | + | chr6.1:6901009-6901028 | None:intergenic | 40.0% | |
| ACCTGTAGTTGATCATCTTC+AGG | - | chr6.1:6901005-6901024 | MS.gene074109:intron | 40.0% | |
| ACTTCTGGTGGTTGTGATTT+AGG | - | chr6.1:6899895-6899914 | MS.gene074109:intron | 40.0% | |
| AGCCTGGCCATTATATACTT+TGG | + | chr6.1:6900250-6900269 | None:intergenic | 40.0% | |
| AGTAACTTTGTGTTAGGCTG+TGG | + | chr6.1:6901037-6901056 | None:intergenic | 40.0% | |
| AGTGTCATATCCGAGTTACA+AGG | + | chr6.1:6896895-6896914 | None:intergenic | 40.0% | |
| AGTGTGGTATCCGAGTTATA+AGG | + | chr6.1:6897224-6897243 | None:intergenic | 40.0% | |
| AGTGTGTCAGGTTTCAGTAT+CGG | + | chr6.1:6896029-6896048 | None:intergenic | 40.0% | |
| ATAATGAACTAGACACGGTC+TGG | - | chr6.1:6899957-6899976 | MS.gene074109:intron | 40.0% | |
| ATCACCATATTGCGTATGCT+TGG | - | chr6.1:6896252-6896271 | MS.gene074109:CDS | 40.0% | |
| ATGACAGATTGCATCTCAGA+AGG | + | chr6.1:6901430-6901449 | None:intergenic | 40.0% | |
| ATGGCAGTTTGAATCCAAAG+AGG | - | chr6.1:6901972-6901991 | MS.gene074109:CDS | 40.0% | |
| ATTCTCAGTTCCAAACTCCT+TGG | - | chr6.1:6898275-6898294 | MS.gene074109:intron | 40.0% | |
| CACTGATCAATTCACCAAGT+AGG | + | chr6.1:6899449-6899468 | None:intergenic | 40.0% | |
| CATAGATTCATCTTCAGCCA+AGG | + | chr6.1:6901872-6901891 | None:intergenic | 40.0% | |
| CCAAGTCCATGTTACTGATA+GGG | - | chr6.1:6899822-6899841 | MS.gene074109:intron | 40.0% | |
| CCCACTTTAATGGTATTACG+TGG | + | chr6.1:6897976-6897995 | None:intergenic | 40.0% | |
| CGATCAAGTTCCCTAATGTA+TGG | + | chr6.1:6899673-6899692 | None:intergenic | 40.0% | |
| CTCCAAAGTATATAATGGCC+AGG | - | chr6.1:6900245-6900264 | MS.gene074109:intron | 40.0% | |
| CTTGGCTGAAGATGAATCTA+TGG | - | chr6.1:6901870-6901889 | MS.gene074109:CDS | 40.0% | |
| CTTGTTTGTGGTCAATAGCT+CGG | + | chr6.1:6899578-6899597 | None:intergenic | 40.0% | |
| CTTTAGATCAAAGACGTGTC+AGG | + | chr6.1:6897340-6897359 | None:intergenic | 40.0% | |
| GAACTACACGTCTTTGATGT+AGG | - | chr6.1:6897295-6897314 | MS.gene074109:intron | 40.0% | |
| GACAAACTTACAGGACAAAC+TGG | + | chr6.1:6901466-6901485 | None:intergenic | 40.0% | |
| GAGAGGTGGAAAACCTTTAA+CGG | + | chr6.1:6899775-6899794 | None:intergenic | 40.0% | |
| GATGAACATGTCCATTAGGA+TGG | - | chr6.1:6898991-6899010 | MS.gene074109:intron | 40.0% | |
| GCATGCATGCATGAATCTTA+AGG | + | chr6.1:6900611-6900630 | None:intergenic | 40.0% | |
| GCCAAATCATCCCACTTTAA+TGG | + | chr6.1:6897986-6898005 | None:intergenic | 40.0% | |
| GCTTTCCTTGTCTGAATTTG+AGG | - | chr6.1:6901497-6901516 | MS.gene074109:intron | 40.0% | |
| GGTATTACGTGGAGAAATAG+TGG | + | chr6.1:6897965-6897984 | None:intergenic | 40.0% | |
| GTAACTTTGTGTTAGGCTGT+GGG | + | chr6.1:6901036-6901055 | None:intergenic | 40.0% | |
| GTTGCAATCCAACATCCAAA+CGG | + | chr6.1:6896655-6896674 | None:intergenic | 40.0% | |
| TACACCCATTGTTGAAAGAG+AGG | + | chr6.1:6900724-6900743 | None:intergenic | 40.0% | |
| TAGTTGATCATCTTCAGGTG+TGG | - | chr6.1:6901010-6901029 | MS.gene074109:intron | 40.0% | |
| TCATATCCGAGTTACAAGGT+GGG | + | chr6.1:6896891-6896910 | None:intergenic | 40.0% | |
| TGGAATCCTACATCAACACA+CGG | + | chr6.1:6896987-6897006 | None:intergenic | 40.0% | |
| TGGTTGTATGCTTTGCAGAA+GGG | - | chr6.1:6898243-6898262 | MS.gene074109:intron | 40.0% | |
| TGTCGAGTGTCTTACACTAT+TGG | + | chr6.1:6897007-6897026 | None:intergenic | 40.0% | |
| TGTTGAAAGAGAAGGAGAGA+AGG | + | chr6.1:6900695-6900714 | None:intergenic | 40.0% | |
| TTCAAAACAACTTTGCACGG+AGG | + | chr6.1:6895795-6895814 | None:intergenic | 40.0% | |
| TTGAAGTTGTTTGGGTGATC+GGG | - | chr6.1:6899329-6899348 | MS.gene074109:intron | 40.0% | |
| TTGCAATCCAACATCCAAAC+GGG | + | chr6.1:6896654-6896673 | None:intergenic | 40.0% | |
| TTGCCCTCTCTTTCAACAAT+GGG | - | chr6.1:6900717-6900736 | MS.gene074109:intron | 40.0% | |
| TTGGTTGTATGCTTTGCAGA+AGG | - | chr6.1:6898242-6898261 | MS.gene074109:intron | 40.0% | |
| TTTAACCTTACTGTCACAGG+TGG | - | chr6.1:6901168-6901187 | MS.gene074109:intron | 40.0% | |
| ! | AGAAGAAGTGATTTTCGGAG+AGG | + | chr6.1:6895578-6895597 | None:intergenic | 40.0% |
| ! | AGTTGCAAAGTGGGTTTAAG+TGG | + | chr6.1:6897634-6897653 | None:intergenic | 40.0% |
| ! | ATGATGGTGATTTGAAGACG+TGG | - | chr6.1:6895751-6895770 | MS.gene074109:intron | 40.0% |
| ! | GAAGAAGTGATTTTCGGAGA+GGG | + | chr6.1:6895577-6895596 | None:intergenic | 40.0% |
| ! | GAGTTGCTACTCAACTTGTT+AGG | - | chr6.1:6901996-6902015 | MS.gene074109:CDS | 40.0% |
| ! | GATCATGCCGTTTCAGATTA+AGG | + | chr6.1:6900336-6900355 | None:intergenic | 40.0% |
| ! | TCTTAGTTCAATCTTGGTGC+AGG | - | chr6.1:6901333-6901352 | MS.gene074109:intron | 40.0% |
| ! | TGTAATCATAGGTGTCGTGT+CGG | - | chr6.1:6896551-6896570 | MS.gene074109:intron | 40.0% |
| !! | ATTTTAGGTGAGCCCTTGTA+TGG | - | chr6.1:6901783-6901802 | MS.gene074109:intron | 40.0% |
| !! | GTCAGTATCGATGTCAGTAA+TGG | + | chr6.1:6896094-6896113 | None:intergenic | 40.0% |
| !! | GTTTATTGGTGATGCAGTGT+TGG | - | chr6.1:6897137-6897156 | MS.gene074109:intron | 40.0% |
| !! | TATGTCTGGTTCTCTCTTTC+AGG | - | chr6.1:6899982-6900001 | MS.gene074109:intron | 40.0% |
| AACTCATCACCTTGTCGTGT+AGG | + | chr6.1:6897773-6897792 | None:intergenic | 45.0% | |
| AATCTATGAAGCACGGACAC+TGG | - | chr6.1:6896484-6896503 | MS.gene074109:intron | 45.0% | |
| AATGCTTCATGCATGCTTGC+AGG | - | chr6.1:6902030-6902049 | MS.gene074109:CDS | 45.0% | |
| ACGGTGTGATAAGGAAGAAG+AGG | + | chr6.1:6895616-6895635 | None:intergenic | 45.0% | |
| ACTAAGCCCACCTTGTAACT+CGG | - | chr6.1:6896882-6896901 | MS.gene074109:CDS | 45.0% | |
| AGAGTGACAACCAAGGAGTT+TGG | + | chr6.1:6898288-6898307 | None:intergenic | 45.0% | |
| CAAGTCTAGTCTCCAACAGA+TGG | - | chr6.1:6898741-6898760 | MS.gene074109:intron | 45.0% | |
| CAATCTGTCATCTCCTCTCA+AGG | - | chr6.1:6901439-6901458 | MS.gene074109:intron | 45.0% | |
| CAGTGGAATCACCTCTTCTA+TGG | - | chr6.1:6899716-6899735 | MS.gene074109:intron | 45.0% | |
| CATCTGTTGGAGACTAGACT+TGG | + | chr6.1:6898743-6898762 | None:intergenic | 45.0% | |
| CATCTTCAGCCAAGGTAGTA+GGG | + | chr6.1:6901864-6901883 | None:intergenic | 45.0% | |
| CCCTATCAGTAACATGGACT+TGG | + | chr6.1:6899825-6899844 | None:intergenic | 45.0% | |
| CCTTGAAGGAAGTCCGTTAA+AGG | - | chr6.1:6899759-6899778 | MS.gene074109:intron | 45.0% | |
| CGGTGTGATAAGGAAGAAGA+GGG | + | chr6.1:6895615-6895634 | None:intergenic | 45.0% | |
| CTCAACTATGAGTCGGTCAT+TGG | + | chr6.1:6901092-6901111 | None:intergenic | 45.0% | |
| CTCATCACGCTTCTTCTTAC+CGG | + | chr6.1:6895730-6895749 | None:intergenic | 45.0% | |
| CTTGCCCTCTCTTTCAACAA+TGG | - | chr6.1:6900716-6900735 | MS.gene074109:intron | 45.0% | |
| GAAAGAGAAGGAGAGAAGGA+AGG | + | chr6.1:6900691-6900710 | None:intergenic | 45.0% | |
| GACGTGTAGTTCCATTACGA+TGG | + | chr6.1:6897287-6897306 | None:intergenic | 45.0% | |
| GCGATGTTAACTGCTGTTGA+TGG | - | chr6.1:6900846-6900865 | MS.gene074109:intron | 45.0% | |
| GCGGAATACATGGTTGCTAT+TGG | - | chr6.1:6898004-6898023 | MS.gene074109:CDS | 45.0% | |
| GGACAACATGTGTATGCTTG+TGG | - | chr6.1:6899353-6899372 | MS.gene074109:CDS | 45.0% | |
| GGGCAAGTTGTTGAAAGAGA+AGG | + | chr6.1:6900703-6900722 | None:intergenic | 45.0% | |
| GGTGGTATATCACATTCCTG+TGG | - | chr6.1:6899267-6899286 | MS.gene074109:intron | 45.0% | |
| GGTGTGATAAGGAAGAAGAG+GGG | + | chr6.1:6895614-6895633 | None:intergenic | 45.0% | |
| GGTTGTATGCTTTGCAGAAG+GGG | - | chr6.1:6898244-6898263 | MS.gene074109:intron | 45.0% | |
| GTCATATCCGAGTTACAAGG+TGG | + | chr6.1:6896892-6896911 | None:intergenic | 45.0% | |
| GTCATGTGTCGTGCATTTAC+AGG | - | chr6.1:6900166-6900185 | MS.gene074109:intron | 45.0% | |
| GTCTTGGGAAACGAGACTAT+TGG | - | chr6.1:6898315-6898334 | MS.gene074109:intron | 45.0% | |
| GTGGTATCCGAGTTATAAGG+CGG | + | chr6.1:6897221-6897240 | None:intergenic | 45.0% | |
| GTGTGATAAGGAAGAAGAGG+GGG | + | chr6.1:6895613-6895632 | None:intergenic | 45.0% | |
| GTGTGTCAGGTTTCAGTATC+GGG | + | chr6.1:6896028-6896047 | None:intergenic | 45.0% | |
| GTGTTCAGCGTTAATCAGGA+AGG | + | chr6.1:6899803-6899822 | None:intergenic | 45.0% | |
| GTGTTGTGCAGTGTTGTATC+CGG | + | chr6.1:6895948-6895967 | None:intergenic | 45.0% | |
| GTTGTATGCTTTGCAGAAGG+GGG | - | chr6.1:6898245-6898264 | MS.gene074109:intron | 45.0% | |
| TAACGTATCGGAATTCGAGG+CGG | + | chr6.1:6895697-6895716 | None:intergenic | 45.0% | |
| TACACTTCCCGTTTGGATGT+TGG | - | chr6.1:6896644-6896663 | MS.gene074109:intron | 45.0% | |
| TATGAAGCACAGACACTCCT+CGG | + | chr6.1:6896613-6896632 | None:intergenic | 45.0% | |
| TCAAATGGAAAAGCCTCGGT+AGG | + | chr6.1:6900116-6900135 | None:intergenic | 45.0% | |
| TCAGACTCTGACCATAGAAG+AGG | + | chr6.1:6899730-6899749 | None:intergenic | 45.0% | |
| TCAGCGTTAATCAGGAAGGA+GGG | + | chr6.1:6899799-6899818 | None:intergenic | 45.0% | |
| TCATCTTCAGCCAAGGTAGT+AGG | + | chr6.1:6901865-6901884 | None:intergenic | 45.0% | |
| TCTGAGCTGACATACCTTGA+AGG | - | chr6.1:6899745-6899764 | MS.gene074109:intron | 45.0% | |
| TGAAGTTGTTTGGGTGATCG+GGG | - | chr6.1:6899330-6899349 | MS.gene074109:intron | 45.0% | |
| TGCTGCTAGTGAAGATCTTC+AGG | - | chr6.1:6895860-6895879 | MS.gene074109:CDS | 45.0% | |
| TGGTATCCGAGTTATAAGGC+GGG | + | chr6.1:6897220-6897239 | None:intergenic | 45.0% | |
| TTCAGCGTTAATCAGGAAGG+AGG | + | chr6.1:6899800-6899819 | None:intergenic | 45.0% | |
| TTGCTACAGTAGGCCAACAA+AGG | + | chr6.1:6900819-6900838 | None:intergenic | 45.0% | |
| ! | AAGAAGCGTGATGAGGATGA+TGG | - | chr6.1:6895735-6895754 | MS.gene074109:intron | 45.0% |
| ! | AATTGGGTCCCCAGCTTTAT+AGG | + | chr6.1:6900898-6900917 | None:intergenic | 45.0% |
| ! | ACGGTGTAGTTCCATTTTGG+TGG | + | chr6.1:6896968-6896987 | None:intergenic | 45.0% |
| ! | ACTACACCGTGTGTTGATGT+AGG | - | chr6.1:6896978-6896997 | MS.gene074109:intron | 45.0% |
| ! | ACTTTGCTATAGCACCGCTA+TGG | + | chr6.1:6899094-6899113 | None:intergenic | 45.0% |
| ! | ATTGGGTCCCCAGCTTTATA+GGG | + | chr6.1:6900897-6900916 | None:intergenic | 45.0% |
| ! | CAATGACCGACTCATAGTTG+AGG | - | chr6.1:6901090-6901109 | MS.gene074109:intron | 45.0% |
| ! | CACACGGTGTAGTTCCATTT+TGG | + | chr6.1:6896971-6896990 | None:intergenic | 45.0% |
| ! | GGATGATTTGGCGGAATACA+TGG | - | chr6.1:6897994-6898013 | MS.gene074109:CDS | 45.0% |
| ! | TCAGACAAGGAAAGCACAAG+TGG | + | chr6.1:6901492-6901511 | None:intergenic | 45.0% |
| !! | ACGTTCTAGAGTGACAACCA+AGG | + | chr6.1:6898295-6898314 | None:intergenic | 45.0% |
| !! | ATAGCGGTGCTATAGCAAAG+TGG | - | chr6.1:6899093-6899112 | MS.gene074109:intron | 45.0% |
| !! | CCTTTAACGGACTTCCTTCA+AGG | + | chr6.1:6899762-6899781 | None:intergenic | 45.0% |
| !! | CTTGGTGTTCAGCGTTAATC+AGG | + | chr6.1:6899807-6899826 | None:intergenic | 45.0% |
| !! | GTCACTCTAGAACGTGTCTT+GGG | - | chr6.1:6898300-6898319 | MS.gene074109:intron | 45.0% |
| !! | TGTCACTCTAGAACGTGTCT+TGG | - | chr6.1:6898299-6898318 | MS.gene074109:intron | 45.0% |
| !! | TCTAATATAATATAATTAAA+CGG | - | chr6.1:6901719-6901738 | MS.gene074109:intron | 5.0% |
| AAGTTGTTTGGGTGATCGGG+GGG | - | chr6.1:6899332-6899351 | MS.gene074109:intron | 50.0% | |
| ACTTGAACACGCCTAATCCG+AGG | - | chr6.1:6896593-6896612 | MS.gene074109:CDS | 50.0% | |
| AGGACAAACTGGACCTTGAG+AGG | + | chr6.1:6901455-6901474 | None:intergenic | 50.0% | |
| AGGTGTATGCTGGGAAGGAA+AGG | - | chr6.1:6901353-6901372 | MS.gene074109:intron | 50.0% | |
| ATACACTGTGGTCTGGTAGC+TGG | + | chr6.1:6902075-6902094 | None:intergenic | 50.0% | |
| ATGGAAAAGCCTCGGTAGGA+AGG | + | chr6.1:6900112-6900131 | None:intergenic | 50.0% | |
| CAAAGCCACCTGTGACAGTA+AGG | + | chr6.1:6901176-6901195 | None:intergenic | 50.0% | |
| CAACATAGGCCTACACGACA+AGG | - | chr6.1:6897761-6897780 | MS.gene074109:intron | 50.0% | |
| CCTAAGCCCGCCTTATAACT+CGG | - | chr6.1:6897211-6897230 | MS.gene074109:intron | 50.0% | |
| CCTCGGTAGGAAGGTCATAT+GGG | + | chr6.1:6900103-6900122 | None:intergenic | 50.0% | |
| CGGAACAGAAACTTCTTCGC+CGG | + | chr6.1:6895677-6895696 | None:intergenic | 50.0% | |
| CTACAGTAGGCCAACAAAGG+AGG | + | chr6.1:6900816-6900835 | None:intergenic | 50.0% | |
| GAAGTTGTTTGGGTGATCGG+GGG | - | chr6.1:6899331-6899350 | MS.gene074109:intron | 50.0% | |
| GATAAGGAAGAAGAGGGGGT+GGG | + | chr6.1:6895609-6895628 | None:intergenic | 50.0% | |
| GATACGTTAGTTGCCGCAAC+CGG | - | chr6.1:6895708-6895727 | MS.gene074109:intron | 50.0% | |
| GGTGGAGAGTGAGAGAAATG+CGG | + | chr6.1:6895643-6895662 | None:intergenic | 50.0% | |
| GGTGTATGCTGGGAAGGAAA+GGG | - | chr6.1:6901354-6901373 | MS.gene074109:intron | 50.0% | |
| GGTTGCGGCAACTAACGTAT+CGG | + | chr6.1:6895709-6895728 | None:intergenic | 50.0% | |
| GTGGAGAGTGAGAGAAATGC+GGG | + | chr6.1:6895642-6895661 | None:intergenic | 50.0% | |
| TAATCAGGAAGGAGGGAGAG+AGG | + | chr6.1:6899792-6899811 | None:intergenic | 50.0% | |
| TCAATAGCTCGGCTGCAACA+AGG | + | chr6.1:6899567-6899586 | None:intergenic | 50.0% | |
| TCGATCGCCCCTATAAAGCT+GGG | - | chr6.1:6900886-6900905 | MS.gene074109:intron | 50.0% | |
| TGAGTAGCAACTCGCCTCTT+TGG | + | chr6.1:6901989-6902008 | None:intergenic | 50.0% | |
| TGATAAGGAAGAAGAGGGGG+TGG | + | chr6.1:6895610-6895629 | None:intergenic | 50.0% | |
| TGCATGCTTGCAGGCAATCA+TGG | - | chr6.1:6902039-6902058 | MS.gene074109:CDS | 50.0% | |
| TGGAGAGTGAGAGAAATGCG+GGG | + | chr6.1:6895641-6895660 | None:intergenic | 50.0% | |
| TTCAGCCAAGGTAGTAGGGT+AGG | + | chr6.1:6901860-6901879 | None:intergenic | 50.0% | |
| TTGTCGAATAGCGGCCATAG+CGG | - | chr6.1:6899077-6899096 | MS.gene074109:intron | 50.0% | |
| ! | ACGCTTCTTCTTACCGGTTG+CGG | + | chr6.1:6895724-6895743 | None:intergenic | 50.0% |
| ! | AGTTATAAGGCGGGCTTAGG+TGG | + | chr6.1:6897211-6897230 | None:intergenic | 50.0% |
| ! | ATCTTGGTGCAGGTGTATGC+TGG | - | chr6.1:6901343-6901362 | MS.gene074109:intron | 50.0% |
| ! | CGGTAAGAAGAAGCGTGATG+AGG | - | chr6.1:6895728-6895747 | MS.gene074109:intron | 50.0% |
| ! | GACACGGTCTGGTTTATGTC+TGG | - | chr6.1:6899968-6899987 | MS.gene074109:intron | 50.0% |
| ! | GTTTTCCGAATTGGCGTGCT+TGG | - | chr6.1:6899597-6899616 | MS.gene074109:intron | 50.0% |
| ! | TCTTGGTGCAGGTGTATGCT+GGG | - | chr6.1:6901344-6901363 | MS.gene074109:intron | 50.0% |
| ! | TTGGGTCCCCAGCTTTATAG+GGG | + | chr6.1:6900896-6900915 | None:intergenic | 50.0% |
| !! | AGATTTGCGCTGGTTCCACT+GGG | - | chr6.1:6900789-6900808 | MS.gene074109:intron | 50.0% |
| !! | GAGGAGTGTCTGTGCTTCAT+AGG | - | chr6.1:6896612-6896631 | MS.gene074109:CDS | 50.0% |
| !! | TGATGGTGCTGTTCAGCTTG+TGG | - | chr6.1:6900863-6900882 | MS.gene074109:intron | 50.0% |
| AACTTGATCGGCAACGAGGC+AGG | - | chr6.1:6899683-6899702 | MS.gene074109:intron | 55.0% | |
| ACTTGATCGGCAACGAGGCA+GGG | - | chr6.1:6899684-6899703 | MS.gene074109:intron | 55.0% | |
| AGAAACTTCTTCGCCGGCGA+CGG | + | chr6.1:6895671-6895690 | None:intergenic | 55.0% | |
| AGGGAACTTGATCGGCAACG+AGG | - | chr6.1:6899679-6899698 | MS.gene074109:intron | 55.0% | |
| AGGTGAGCCCTTGTATGGAG+CGG | - | chr6.1:6901788-6901807 | MS.gene074109:intron | 55.0% | |
| ATCAGCAAGCTGGTCCAGCA+CGG | + | chr6.1:6901815-6901834 | None:intergenic | 55.0% | |
| CAAGGCCAAGCACGCCAATT+CGG | + | chr6.1:6899605-6899624 | None:intergenic | 55.0% | |
| CATGGCGATACACTGTGGTC+TGG | + | chr6.1:6902082-6902101 | None:intergenic | 55.0% | |
| CCCATATGACCTTCCTACCG+AGG | - | chr6.1:6900100-6900119 | MS.gene074109:intron | 55.0% | |
| CGATCGCCCCTATAAAGCTG+GGG | - | chr6.1:6900887-6900906 | MS.gene074109:intron | 55.0% | |
| CGCCTTGCAGTTGCTACAGT+AGG | + | chr6.1:6900829-6900848 | None:intergenic | 55.0% | |
| CTGGGGACCCAATTGTTGTC+TGG | - | chr6.1:6900904-6900923 | MS.gene074109:intron | 55.0% | |
| CTTAGCTCGGAGATTTGCGC+TGG | - | chr6.1:6900779-6900798 | MS.gene074109:intron | 55.0% | |
| GCACAGACACTCCTCGGATT+AGG | + | chr6.1:6896607-6896626 | None:intergenic | 55.0% | |
| GCCTCGGTAGGAAGGTCATA+TGG | + | chr6.1:6900104-6900123 | None:intergenic | 55.0% | |
| GGCCTACTGTAGCAACTGCA+AGG | - | chr6.1:6900824-6900843 | MS.gene074109:intron | 55.0% | |
| GTCGATCGCCCCTATAAAGC+TGG | - | chr6.1:6900885-6900904 | MS.gene074109:intron | 55.0% | |
| GTGAGAGAAATGCGGGGAGA+CGG | + | chr6.1:6895635-6895654 | None:intergenic | 55.0% | |
| TCCACTGGGACCTCCTTTGT+TGG | - | chr6.1:6900803-6900822 | MS.gene074109:intron | 55.0% | |
| ! | AACGAAGGTGCATAGGGAGC+AGG | + | chr6.1:6902106-6902125 | None:intergenic | 55.0% |
| ! | ACGAAGGTGCATAGGGAGCA+GGG | + | chr6.1:6902105-6902124 | None:intergenic | 55.0% |
| ! | CATAGGTGTCGTGTCGGTGT+CGG | - | chr6.1:6896557-6896576 | MS.gene074109:intron | 55.0% |
| ! | CCGAGTTATAAGGCGGGCTT+AGG | + | chr6.1:6897214-6897233 | None:intergenic | 55.0% |
| !! | GAGATTTGCGCTGGTTCCAC+TGG | - | chr6.1:6900788-6900807 | MS.gene074109:intron | 55.0% |
| CAGGGCATGGCGATACACTG+TGG | + | chr6.1:6902087-6902106 | None:intergenic | 60.0% | |
| CTTGATCGGCAACGAGGCAG+GGG | - | chr6.1:6899685-6899704 | MS.gene074109:intron | 60.0% | |
| GCCAACAAAGGAGGTCCCAG+TGG | + | chr6.1:6900807-6900826 | None:intergenic | 60.0% | |
| GGCTGCCTACCCTACTACCT+TGG | - | chr6.1:6901852-6901871 | MS.gene074109:CDS | 60.0% | |
| GGTGAGCCCTTGTATGGAGC+GGG | - | chr6.1:6901789-6901808 | MS.gene074109:intron | 60.0% | |
| GGTGCAGGTGTATGCTGGGA+AGG | - | chr6.1:6901348-6901367 | MS.gene074109:intron | 60.0% | |
| TCAGGAAGGAGGGAGAGAGG+TGG | + | chr6.1:6899789-6899808 | None:intergenic | 60.0% | |
| TCTCCACCAATCACCGTCGC+CGG | - | chr6.1:6895655-6895674 | MS.gene074109:CDS | 60.0% | |
| TGCGGGGAGACGGTGTGATA+AGG | + | chr6.1:6895625-6895644 | None:intergenic | 60.0% | |
| ! | GGCGTGTTCAAGTGTCGCGT+CGG | + | chr6.1:6896586-6896605 | None:intergenic | 60.0% |
| AGCACGGCCCGCTCCATACA+AGG | + | chr6.1:6901799-6901818 | None:intergenic | 65.0% | |
| AGGCAGGGGTCAACTGGCAG+TGG | - | chr6.1:6899699-6899718 | MS.gene074109:intron | 65.0% | |
| GCAACGAGGCAGGGGTCAAC+TGG | - | chr6.1:6899693-6899712 | MS.gene074109:intron | 65.0% | |
| GCACGGCCCGCTCCATACAA+GGG | + | chr6.1:6901798-6901817 | None:intergenic | 65.0% | |
| GGTGCATAGGGAGCAGGGCA+TGG | + | chr6.1:6902100-6902119 | None:intergenic | 65.0% | |
| TCTTCGCCGGCGACGGTGAT+TGG | + | chr6.1:6895664-6895683 | None:intergenic | 65.0% | |
| TTGTATGGAGCGGGCCGTGC+TGG | - | chr6.1:6901798-6901817 | MS.gene074109:intron | 65.0% | |
| TCGCCGGCGACGGTGATTGG+TGG | + | chr6.1:6895661-6895680 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 6895555 | 6902132 | 6895555 | ID=MS.gene074109 |
| chr6.1 | mRNA | 6895555 | 6902132 | 6895555 | ID=MS.gene074109.t1;Parent=MS.gene074109 |
| chr6.1 | exon | 6901806 | 6902132 | 6901806 | ID=MS.gene074109.t1.exon1;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6901806 | 6902132 | 6901806 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6899351 | 6899426 | 6899351 | ID=MS.gene074109.t1.exon2;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6899351 | 6899426 | 6899351 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6897907 | 6898112 | 6897907 | ID=MS.gene074109.t1.exon3;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6897907 | 6898112 | 6897907 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6897684 | 6897770 | 6897684 | ID=MS.gene074109.t1.exon4;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6897684 | 6897770 | 6897684 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6897500 | 6897592 | 6897500 | ID=MS.gene074109.t1.exon5;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6897500 | 6897592 | 6897500 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6896762 | 6896916 | 6896762 | ID=MS.gene074109.t1.exon6;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6896762 | 6896916 | 6896762 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6896576 | 6896660 | 6896576 | ID=MS.gene074109.t1.exon7;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6896576 | 6896660 | 6896576 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6896414 | 6896500 | 6896414 | ID=MS.gene074109.t1.exon8;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6896414 | 6896500 | 6896414 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6896213 | 6896332 | 6896213 | ID=MS.gene074109.t1.exon9;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6896213 | 6896332 | 6896213 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6895796 | 6895897 | 6895796 | ID=MS.gene074109.t1.exon10;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6895796 | 6895897 | 6895796 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| chr6.1 | exon | 6895555 | 6895722 | 6895555 | ID=MS.gene074109.t1.exon11;Parent=MS.gene074109.t1 |
| chr6.1 | CDS | 6895555 | 6895722 | 6895555 | ID=cds.MS.gene074109.t1;Parent=MS.gene074109.t1 |
| Gene Sequence |
| Protein sequence |
