Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46129.t1 | XP_013448931.1 | 90.5 | 95 | 8 | 1 | 4 | 98 | 5 | 98 | 3.20E-40 | 174.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46129.t1 | O81208 | 54.1 | 85 | 37 | 1 | 16 | 98 | 4 | 88 | 4.0e-15 | 82.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46129.t1 | A0A072TZM6 | 90.5 | 95 | 8 | 1 | 4 | 98 | 5 | 98 | 2.3e-40 | 174.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene46129 | 0.857946 | 1.15E-62 | -1.69E-46 |
| MS.gene049171 | MS.gene46129 | 0.908876 | 1.06E-81 | -1.69E-46 |
| MS.gene049173 | MS.gene46129 | 0.859277 | 4.62E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene46129 | 0.872803 | 2.40E-67 | -1.69E-46 |
| MS.gene049222 | MS.gene46129 | 0.908162 | 2.31E-81 | -1.69E-46 |
| MS.gene049232 | MS.gene46129 | 0.853423 | 2.41E-61 | -1.69E-46 |
| MS.gene049285 | MS.gene46129 | 0.897283 | 1.63E-76 | -1.69E-46 |
| MS.gene049320 | MS.gene46129 | 0.895579 | 8.38E-76 | -1.69E-46 |
| MS.gene049369 | MS.gene46129 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene46129 | 0.819058 | 1.42E-52 | -1.69E-46 |
| MS.gene04939 | MS.gene46129 | 0.839922 | 1.19E-57 | -1.69E-46 |
| MS.gene049427 | MS.gene46129 | 0.835463 | 1.65E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene46129 | 0.91394 | 3.43E-84 | -1.69E-46 |
| MS.gene049615 | MS.gene46129 | 0.838802 | 2.32E-57 | -1.69E-46 |
| MS.gene049627 | MS.gene46129 | 0.80068 | 1.29E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene46129 | 0.882335 | 1.14E-70 | -1.69E-46 |
| MS.gene049805 | MS.gene46129 | 0.871844 | 5.01E-67 | -1.69E-46 |
| MS.gene049865 | MS.gene46129 | 0.81843 | 1.97E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene46129 | 0.83223 | 1.06E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene46129 | 0.883095 | 6.00E-71 | -1.69E-46 |
| MS.gene050165 | MS.gene46129 | 0.8707 | 1.20E-66 | -1.69E-46 |
| MS.gene050170 | MS.gene46129 | 0.858602 | 7.36E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene46129 | 0.868083 | 8.50E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene46129 | 0.850499 | 1.63E-60 | -1.69E-46 |
| MS.gene050381 | MS.gene46129 | -0.804181 | 2.44E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene46129 | 0.840865 | 6.72E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene46129 | 0.854377 | 1.28E-61 | -1.69E-46 |
| MS.gene050502 | MS.gene46129 | 0.815253 | 1.02E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene46129 | 0.877228 | 7.43E-69 | -1.69E-46 |
| MS.gene050507 | MS.gene46129 | 0.814728 | 1.33E-51 | -1.69E-46 |
| MS.gene050518 | MS.gene46129 | 0.887163 | 1.82E-72 | -1.69E-46 |
| MS.gene050538 | MS.gene46129 | 0.857171 | 1.96E-62 | -1.69E-46 |
| MS.gene050577 | MS.gene46129 | 0.886068 | 4.72E-72 | -1.69E-46 |
| MS.gene050593 | MS.gene46129 | 0.886877 | 2.33E-72 | -1.69E-46 |
| MS.gene050612 | MS.gene46129 | 0.882203 | 1.27E-70 | -1.69E-46 |
| MS.gene050647 | MS.gene46129 | -0.827225 | 1.76E-54 | -1.69E-46 |
| MS.gene050662 | MS.gene46129 | 0.806551 | 7.79E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene46129 | 0.822424 | 2.39E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene46129 | 0.893963 | 3.85E-75 | -1.69E-46 |
| MS.gene050690 | MS.gene46129 | 0.833792 | 4.35E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene46129 | 0.901294 | 3.10E-78 | -1.69E-46 |
| MS.gene050747 | MS.gene46129 | 0.886736 | 2.64E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene46129 | 0.910278 | 2.24E-82 | -1.69E-46 |
| MS.gene05080 | MS.gene46129 | 0.886441 | 3.41E-72 | -1.69E-46 |
| MS.gene05081 | MS.gene46129 | 0.836138 | 1.12E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene46129 | 0.854074 | 1.57E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene46129 | 0.852513 | 4.40E-61 | -1.69E-46 |
| MS.gene050876 | MS.gene46129 | 0.812576 | 3.95E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene46129 | 0.838005 | 3.72E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene46129 | 0.879291 | 1.40E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene46129 | 0.871865 | 4.93E-67 | -1.69E-46 |
| MS.gene05100 | MS.gene46129 | 0.867719 | 1.11E-65 | -1.69E-46 |
| MS.gene05105 | MS.gene46129 | 0.862516 | 4.80E-64 | -1.69E-46 |
| MS.gene051127 | MS.gene46129 | -0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene46129 | 0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene46129 | 0.820685 | 6.02E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene46129 | 0.846092 | 2.70E-59 | -1.69E-46 |
| MS.gene051364 | MS.gene46129 | -0.802592 | 5.21E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene46129 | 0.840753 | 7.19E-58 | -1.69E-46 |
| MS.gene051509 | MS.gene46129 | 0.815362 | 9.61E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene46129 | 0.848807 | 4.84E-60 | -1.69E-46 |
| MS.gene051651 | MS.gene46129 | -0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene46129 | 0.884894 | 1.30E-71 | -1.69E-46 |
| MS.gene051694 | MS.gene46129 | 0.821753 | 3.41E-53 | -1.69E-46 |
| MS.gene051734 | MS.gene46129 | 0.850101 | 2.11E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene46129 | 0.850903 | 1.26E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene46129 | 0.866892 | 2.05E-65 | -1.69E-46 |
| MS.gene051858 | MS.gene46129 | 0.863067 | 3.24E-64 | -1.69E-46 |
| MS.gene051874 | MS.gene46129 | 0.828029 | 1.13E-54 | -1.69E-46 |
| MS.gene051941 | MS.gene46129 | 0.823062 | 1.70E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene46129 | 0.824681 | 7.07E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene46129 | 0.876428 | 1.41E-68 | -1.69E-46 |
| MS.gene052271 | MS.gene46129 | 0.842587 | 2.36E-58 | -1.69E-46 |
| MS.gene052346 | MS.gene46129 | 0.822219 | 2.66E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene46129 | 0.815948 | 7.12E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene46129 | -0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene46129 | 0.81858 | 1.82E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene46129 | 0.829369 | 5.35E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene46129 | 0.822524 | 2.26E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene46129 | 0.861003 | 1.39E-63 | -1.69E-46 |
| MS.gene052484 | MS.gene46129 | 0.828035 | 1.12E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene46129 | 0.872294 | 3.55E-67 | -1.69E-46 |
| MS.gene052501 | MS.gene46129 | 0.872899 | 2.23E-67 | -1.69E-46 |
| MS.gene052503 | MS.gene46129 | 0.90224 | 1.19E-78 | -1.69E-46 |
| MS.gene052505 | MS.gene46129 | 0.863376 | 2.60E-64 | -1.69E-46 |
| MS.gene052506 | MS.gene46129 | 0.848363 | 6.43E-60 | -1.69E-46 |
| MS.gene052615 | MS.gene46129 | 0.875569 | 2.78E-68 | -1.69E-46 |
| MS.gene052820 | MS.gene46129 | 0.800573 | 1.35E-48 | -1.69E-46 |
| MS.gene052822 | MS.gene46129 | 0.855163 | 7.59E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene46129 | 0.897343 | 1.54E-76 | -1.69E-46 |
| MS.gene052825 | MS.gene46129 | 0.890681 | 7.91E-74 | -1.69E-46 |
| MS.gene052870 | MS.gene46129 | 0.837145 | 6.18E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene46129 | 0.852214 | 5.35E-61 | -1.69E-46 |
| MS.gene052916 | MS.gene46129 | 0.848873 | 4.64E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene46129 | 0.882067 | 1.42E-70 | -1.69E-46 |
| MS.gene052982 | MS.gene46129 | 0.838085 | 3.54E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene46129 | 0.802761 | 4.81E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene46129 | 0.858834 | 6.27E-63 | -1.69E-46 |
| MS.gene053107 | MS.gene46129 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene053117 | MS.gene46129 | 0.813198 | 2.89E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene46129 | 0.88815 | 7.62E-73 | -1.69E-46 |
| MS.gene053207 | MS.gene46129 | 0.86748 | 1.33E-65 | -1.69E-46 |
| MS.gene053213 | MS.gene46129 | 0.899976 | 1.16E-77 | -1.69E-46 |
| MS.gene053286 | MS.gene46129 | 0.892966 | 9.74E-75 | -1.69E-46 |
| MS.gene053322 | MS.gene46129 | 0.820317 | 7.31E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene46129 | -0.80518 | 1.51E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene46129 | 0.873229 | 1.73E-67 | -1.69E-46 |
| MS.gene053449 | MS.gene46129 | 0.827848 | 1.25E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene46129 | 0.847842 | 8.95E-60 | -1.69E-46 |
| MS.gene053480 | MS.gene46129 | 0.848529 | 5.79E-60 | -1.69E-46 |
| MS.gene053574 | MS.gene46129 | 0.912577 | 1.66E-83 | -1.69E-46 |
| MS.gene053579 | MS.gene46129 | 0.808477 | 3.04E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene46129 | 0.845573 | 3.73E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene46129 | 0.876345 | 1.50E-68 | -1.69E-46 |
| MS.gene053824 | MS.gene46129 | 0.87666 | 1.17E-68 | -1.69E-46 |
| MS.gene053912 | MS.gene46129 | 0.8282 | 1.03E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene46129 | 0.849485 | 3.14E-60 | -1.69E-46 |
| MS.gene054003 | MS.gene46129 | 0.81826 | 2.15E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene46129 | 0.827245 | 1.74E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene46129 | 0.8659 | 4.22E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene46129 | 0.903804 | 2.37E-79 | -1.69E-46 |
| MS.gene054642 | MS.gene46129 | 0.884349 | 2.07E-71 | -1.69E-46 |
| MS.gene054706 | MS.gene46129 | -0.826435 | 2.72E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene46129 | 0.884349 | 2.07E-71 | -1.69E-46 |
| MS.gene054884 | MS.gene46129 | -0.837147 | 6.17E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene46129 | 0.872136 | 4.01E-67 | -1.69E-46 |
| MS.gene05494 | MS.gene46129 | 0.8204 | 7.00E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene46129 | 0.877967 | 4.11E-69 | -1.69E-46 |
| MS.gene05505 | MS.gene46129 | 0.852324 | 4.97E-61 | -1.69E-46 |
| MS.gene055154 | MS.gene46129 | -0.813917 | 2.01E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene46129 | 0.86483 | 9.17E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene46129 | 0.817671 | 2.92E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene46129 | 0.862858 | 3.76E-64 | -1.69E-46 |
| MS.gene055289 | MS.gene46129 | 0.849252 | 3.64E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene46129 | 0.887522 | 1.33E-72 | -1.69E-46 |
| MS.gene055397 | MS.gene46129 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene055499 | MS.gene46129 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene46129 | 0.903123 | 4.80E-79 | -1.69E-46 |
| MS.gene055577 | MS.gene46129 | 0.910853 | 1.18E-82 | -1.69E-46 |
| MS.gene055647 | MS.gene46129 | 0.850193 | 1.99E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene46129 | 0.885204 | 9.94E-72 | -1.69E-46 |
| MS.gene055741 | MS.gene46129 | 0.840055 | 1.09E-57 | -1.69E-46 |
| MS.gene055744 | MS.gene46129 | 0.831572 | 1.55E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene46129 | 0.871894 | 4.82E-67 | -1.69E-46 |
| MS.gene055750 | MS.gene46129 | 0.877029 | 8.72E-69 | -1.69E-46 |
| MS.gene055751 | MS.gene46129 | 0.866961 | 1.94E-65 | -1.69E-46 |
| MS.gene055776 | MS.gene46129 | 0.815549 | 8.74E-52 | -1.69E-46 |
| MS.gene055849 | MS.gene46129 | 0.802706 | 4.94E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene46129 | 0.887604 | 1.23E-72 | -1.69E-46 |
| MS.gene05592 | MS.gene46129 | 0.836174 | 1.09E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene46129 | 0.908797 | 1.15E-81 | -1.69E-46 |
| MS.gene056040 | MS.gene46129 | 0.830847 | 2.33E-55 | -1.69E-46 |
| MS.gene056046 | MS.gene46129 | 0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene46129 | 0.831519 | 1.59E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene46129 | 0.866408 | 2.91E-65 | -1.69E-46 |
| MS.gene056283 | MS.gene46129 | 0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene46129 | 0.852798 | 3.65E-61 | -1.69E-46 |
| MS.gene056387 | MS.gene46129 | 0.812536 | 4.04E-51 | -1.69E-46 |
| MS.gene056409 | MS.gene46129 | 0.814607 | 1.41E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene46129 | 0.813619 | 2.34E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene46129 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene056448 | MS.gene46129 | 0.81055 | 1.09E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene46129 | 0.808772 | 2.63E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene46129 | 0.810988 | 8.76E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene46129 | 0.889724 | 1.87E-73 | -1.69E-46 |
| MS.gene056510 | MS.gene46129 | 0.869596 | 2.75E-66 | -1.69E-46 |
| MS.gene056511 | MS.gene46129 | 0.824732 | 6.88E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene46129 | 0.828443 | 8.96E-55 | -1.69E-46 |
| MS.gene056590 | MS.gene46129 | -0.816235 | 6.14E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene46129 | -0.81615 | 6.41E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene46129 | 0.843497 | 1.35E-58 | -1.69E-46 |
| MS.gene05664 | MS.gene46129 | 0.8572 | 1.92E-62 | -1.69E-46 |
| MS.gene056657 | MS.gene46129 | 0.898173 | 6.88E-77 | -1.69E-46 |
| MS.gene05666 | MS.gene46129 | 0.85317 | 2.85E-61 | -1.69E-46 |
| MS.gene056692 | MS.gene46129 | 0.884746 | 1.47E-71 | -1.69E-46 |
| MS.gene056877 | MS.gene46129 | 0.838285 | 3.15E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene46129 | 0.805413 | 1.35E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene46129 | 0.842592 | 2.35E-58 | -1.69E-46 |
| MS.gene057048 | MS.gene46129 | 0.819793 | 9.64E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene46129 | 0.888986 | 3.63E-73 | -1.69E-46 |
| MS.gene057086 | MS.gene46129 | 0.843939 | 1.03E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene46129 | 0.826256 | 3.00E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene46129 | 0.800314 | 1.53E-48 | -1.69E-46 |
| MS.gene057196 | MS.gene46129 | 0.815811 | 7.64E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene46129 | 0.871737 | 5.44E-67 | -1.69E-46 |
| MS.gene057332 | MS.gene46129 | 0.834884 | 2.32E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene46129 | 0.890983 | 6.01E-74 | -1.69E-46 |
| MS.gene057658 | MS.gene46129 | 0.894467 | 2.40E-75 | -1.69E-46 |
| MS.gene057734 | MS.gene46129 | 0.860674 | 1.75E-63 | -1.69E-46 |
| MS.gene057775 | MS.gene46129 | 0.804122 | 2.51E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene46129 | 0.910213 | 2.41E-82 | -1.69E-46 |
| MS.gene057856 | MS.gene46129 | 0.834597 | 2.73E-56 | -1.69E-46 |
| MS.gene057857 | MS.gene46129 | 0.825444 | 4.67E-54 | -1.69E-46 |
| MS.gene05787 | MS.gene46129 | 0.840155 | 1.03E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene46129 | 0.815611 | 8.46E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene46129 | 0.885609 | 7.01E-72 | -1.69E-46 |
| MS.gene058130 | MS.gene46129 | 0.819017 | 1.45E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene46129 | -0.848859 | 4.68E-60 | -1.69E-46 |
| MS.gene058338 | MS.gene46129 | 0.872129 | 4.03E-67 | -1.69E-46 |
| MS.gene05837 | MS.gene46129 | 0.880722 | 4.34E-70 | -1.69E-46 |
| MS.gene058419 | MS.gene46129 | 0.917554 | 4.61E-86 | -1.69E-46 |
| MS.gene058444 | MS.gene46129 | 0.80908 | 2.26E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene46129 | 0.893018 | 9.29E-75 | -1.69E-46 |
| MS.gene058700 | MS.gene46129 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene46129 | 0.858791 | 6.46E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene46129 | 0.872338 | 3.43E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene46129 | 0.903935 | 2.07E-79 | -1.69E-46 |
| MS.gene05883 | MS.gene46129 | 0.851491 | 8.57E-61 | -1.69E-46 |
| MS.gene058948 | MS.gene46129 | 0.801343 | 9.42E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene46129 | 0.881616 | 2.07E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene46129 | 0.904408 | 1.27E-79 | -1.69E-46 |
| MS.gene059029 | MS.gene46129 | 0.819931 | 8.96E-53 | -1.69E-46 |
| MS.gene05912 | MS.gene46129 | 0.82882 | 7.27E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene46129 | 0.866307 | 3.14E-65 | -1.69E-46 |
| MS.gene05914 | MS.gene46129 | 0.814661 | 1.38E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene46129 | 0.8887 | 4.68E-73 | -1.69E-46 |
| MS.gene059367 | MS.gene46129 | 0.849492 | 3.12E-60 | -1.69E-46 |
| MS.gene059368 | MS.gene46129 | 0.817767 | 2.78E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene46129 | 0.870829 | 1.09E-66 | -1.69E-46 |
| MS.gene059536 | MS.gene46129 | 0.839644 | 1.40E-57 | -1.69E-46 |
| MS.gene059667 | MS.gene46129 | 0.865882 | 4.28E-65 | -1.69E-46 |
| MS.gene059677 | MS.gene46129 | 0.896644 | 3.03E-76 | -1.69E-46 |
| MS.gene059718 | MS.gene46129 | 0.898786 | 3.77E-77 | -1.69E-46 |
| MS.gene059756 | MS.gene46129 | 0.862348 | 5.40E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene46129 | 0.859732 | 3.37E-63 | -1.69E-46 |
| MS.gene059837 | MS.gene46129 | 0.813789 | 2.14E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene46129 | 0.888321 | 6.55E-73 | -1.69E-46 |
| MS.gene059902 | MS.gene46129 | 0.860698 | 1.72E-63 | -1.69E-46 |
| MS.gene059953 | MS.gene46129 | -0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene46129 | -0.816663 | 4.92E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene46129 | 0.822433 | 2.38E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene46129 | 0.849748 | 2.65E-60 | -1.69E-46 |
| MS.gene060193 | MS.gene46129 | 0.81789 | 2.61E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene46129 | 0.813218 | 2.86E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene46129 | 0.842034 | 3.31E-58 | -1.69E-46 |
| MS.gene060593 | MS.gene46129 | -0.815068 | 1.12E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene46129 | -0.805727 | 1.16E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene46129 | 0.869647 | 2.65E-66 | -1.69E-46 |
| MS.gene060762 | MS.gene46129 | 0.891136 | 5.23E-74 | -1.69E-46 |
| MS.gene060778 | MS.gene46129 | 0.848909 | 4.54E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene46129 | 0.884364 | 2.04E-71 | -1.69E-46 |
| MS.gene060804 | MS.gene46129 | 0.860629 | 1.81E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene46129 | 0.80345 | 3.47E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene46129 | 0.89824 | 6.44E-77 | -1.69E-46 |
| MS.gene060837 | MS.gene46129 | 0.834196 | 3.45E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene46129 | 0.885293 | 9.21E-72 | -1.69E-46 |
| MS.gene06097 | MS.gene46129 | 0.829917 | 3.94E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene46129 | 0.889022 | 3.51E-73 | -1.69E-46 |
| MS.gene061041 | MS.gene46129 | 0.835305 | 1.81E-56 | -1.69E-46 |
| MS.gene061044 | MS.gene46129 | -0.808918 | 2.45E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene46129 | 0.878745 | 2.19E-69 | -1.69E-46 |
| MS.gene061200 | MS.gene46129 | 0.837349 | 5.48E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46129.t1 | MTR_7g062970 | 90.526 | 95 | 8 | 1 | 4 | 98 | 5 | 98 | 1.06e-58 | 175 |
| MS.gene46129.t1 | MTR_7g062970 | 90.526 | 95 | 8 | 1 | 4 | 98 | 5 | 98 | 1.07e-58 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46129.t1 | AT5G02120 | 68.966 | 58 | 18 | 0 | 41 | 98 | 31 | 88 | 2.44e-22 | 84.0 |
Find 26 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAATTGAGGCTGTACTTT+TGG | 0.250391 | 7.2:+40826310 | None:intergenic |
| GATGAATGATGATGGTAATT+TGG | 0.273708 | 7.2:+40826598 | None:intergenic |
| CAATTTAAACCACCATTTCT+TGG | 0.280965 | 7.2:-40826295 | MS.gene46129:CDS |
| TTACCATCATCATTCATCTT+AGG | 0.293810 | 7.2:-40826593 | MS.gene46129:CDS |
| CTGCTGGTCTGTTCAAGTTA+TGG | 0.307312 | 7.2:+40826522 | None:intergenic |
| TTACAAAGACAGCTGAAATA+TGG | 0.347950 | 7.2:-40826270 | MS.gene46129:CDS |
| CTCTTCCTGTGAGGTGCTGC+TGG | 0.363766 | 7.2:+40826506 | None:intergenic |
| TTTGAAGGAACAAAAGTTGA+TGG | 0.364124 | 7.2:+40826546 | None:intergenic |
| AATTTAAACCACCATTTCTT+GGG | 0.388545 | 7.2:-40826294 | MS.gene46129:CDS |
| AACTCTAGAGCTTGCATGAT+AGG | 0.431455 | 7.2:-40826247 | MS.gene46129:CDS |
| GTCTTTGTAAACCCAAGAAA+TGG | 0.476667 | 7.2:+40826283 | None:intergenic |
| AGAAATGGTGGTTTAAATTG+AGG | 0.476737 | 7.2:+40826298 | None:intergenic |
| CAAGCAGTAAAACCTCCTTC+TGG | 0.490122 | 7.2:-40826467 | MS.gene46129:CDS |
| GCTTGCATGATAGGACTCAT+TGG | 0.494425 | 7.2:-40826238 | MS.gene46129:CDS |
| ACTCACAAGCTCTACAATGA+AGG | 0.558455 | 7.2:+40826213 | None:intergenic |
| TATAAAGTGCTTACACCAGA+AGG | 0.567321 | 7.2:+40826452 | None:intergenic |
| GTTCCTAAGATGAATGATGA+TGG | 0.568966 | 7.2:+40826590 | None:intergenic |
| TTTGTAAACCCAAGAAATGG+TGG | 0.572116 | 7.2:+40826286 | None:intergenic |
| TTTGGTTGATGAGGTAGCCA+TGG | 0.573745 | 7.2:+40826616 | None:intergenic |
| ACAGACCAGCAGCACCTCAC+AGG | 0.606120 | 7.2:-40826511 | MS.gene46129:CDS |
| GTTTGTAGAGTGAAGTGAAG+GGG | 0.621170 | 7.2:+40826568 | None:intergenic |
| TGATGGTAATTTGGTTGATG+AGG | 0.628797 | 7.2:+40826607 | None:intergenic |
| TGGTTTGTAGAGTGAAGTGA+AGG | 0.633356 | 7.2:+40826566 | None:intergenic |
| AAAGTGCTTACACCAGAAGG+AGG | 0.671074 | 7.2:+40826455 | None:intergenic |
| AAGGAAACTCTCTTCCTGTG+AGG | 0.718755 | 7.2:+40826497 | None:intergenic |
| GGTTTGTAGAGTGAAGTGAA+GGG | 0.731952 | 7.2:+40826567 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGCATTTTATATGTAAT+AGG | - | chr7.2:40826589-40826608 | MS.gene46129:CDS | 15.0% |
| !!! | TAAGTTATTTATGAAGTTTT+TGG | - | chr7.2:40826387-40826406 | MS.gene46129:intron | 15.0% |
| !!! | TTTGCATTTTATATGTAATA+GGG | - | chr7.2:40826590-40826609 | MS.gene46129:CDS | 15.0% |
| !!! | ATGAAGTTTTTGGATTATTT+GGG | - | chr7.2:40826397-40826416 | MS.gene46129:intron | 20.0% |
| !!! | TATGAAGTTTTTGGATTATT+TGG | - | chr7.2:40826396-40826415 | MS.gene46129:intron | 20.0% |
| !!! | TTGCATTTTATATGTAATAG+GGG | - | chr7.2:40826591-40826610 | MS.gene46129:CDS | 20.0% |
| ! | AATTTAAACCACCATTTCTT+GGG | - | chr7.2:40826461-40826480 | MS.gene46129:intron | 25.0% |
| AGAAATGGTGGTTTAAATTG+AGG | + | chr7.2:40826460-40826479 | None:intergenic | 30.0% | |
| CAATTTAAACCACCATTTCT+TGG | - | chr7.2:40826460-40826479 | MS.gene46129:intron | 30.0% | |
| TTACAAAGACAGCTGAAATA+TGG | - | chr7.2:40826485-40826504 | MS.gene46129:CDS | 30.0% | |
| TTACCATCATCATTCATCTT+AGG | - | chr7.2:40826162-40826181 | MS.gene46129:intron | 30.0% | |
| TTTGAAGGAACAAAAGTTGA+TGG | + | chr7.2:40826212-40826231 | None:intergenic | 30.0% | |
| ! | TAAATTGAGGCTGTACTTTT+GGG | + | chr7.2:40826447-40826466 | None:intergenic | 30.0% |
| ! | TTAAATTGAGGCTGTACTTT+TGG | + | chr7.2:40826448-40826467 | None:intergenic | 30.0% |
| ! | TTTTACTGCTTGAACAGTTA+AGG | + | chr7.2:40826280-40826299 | None:intergenic | 30.0% |
| !! | GATGAATGATGATGGTAATT+TGG | + | chr7.2:40826160-40826179 | None:intergenic | 30.0% |
| !!! | TGTTCAAGTTATGGTTTTGA+AGG | + | chr7.2:40826227-40826246 | None:intergenic | 30.0% |
| GTCTTTGTAAACCCAAGAAA+TGG | + | chr7.2:40826475-40826494 | None:intergenic | 35.0% | |
| GTTCCTAAGATGAATGATGA+TGG | + | chr7.2:40826168-40826187 | None:intergenic | 35.0% | |
| TTTGTAAACCCAAGAAATGG+TGG | + | chr7.2:40826472-40826491 | None:intergenic | 35.0% | |
| ! | TATAAAGTGCTTACACCAGA+AGG | + | chr7.2:40826306-40826325 | None:intergenic | 35.0% |
| ! | TGATGGTAATTTGGTTGATG+AGG | + | chr7.2:40826151-40826170 | None:intergenic | 35.0% |
| !!! | TTTGGGTTTGTGCTATTTTC+AGG | - | chr7.2:40826414-40826433 | MS.gene46129:intron | 35.0% |
| ACTCACAAGCTCTACAATGA+AGG | + | chr7.2:40826545-40826564 | None:intergenic | 40.0% | |
| GGTTTGTAGAGTGAAGTGAA+GGG | + | chr7.2:40826191-40826210 | None:intergenic | 40.0% | |
| GTTTGTAGAGTGAAGTGAAG+GGG | + | chr7.2:40826190-40826209 | None:intergenic | 40.0% | |
| ! | TGGTTTGTAGAGTGAAGTGA+AGG | + | chr7.2:40826192-40826211 | None:intergenic | 40.0% |
| !! | AACTCTAGAGCTTGCATGAT+AGG | - | chr7.2:40826508-40826527 | MS.gene46129:CDS | 40.0% |
| AAGGAAACTCTCTTCCTGTG+AGG | + | chr7.2:40826261-40826280 | None:intergenic | 45.0% | |
| CAAGCAGTAAAACCTCCTTC+TGG | - | chr7.2:40826288-40826307 | MS.gene46129:CDS | 45.0% | |
| GCTTGCATGATAGGACTCAT+TGG | - | chr7.2:40826517-40826536 | MS.gene46129:CDS | 45.0% | |
| ! | AAAGTGCTTACACCAGAAGG+AGG | + | chr7.2:40826303-40826322 | None:intergenic | 45.0% |
| ! | CTGCTGGTCTGTTCAAGTTA+TGG | + | chr7.2:40826236-40826255 | None:intergenic | 45.0% |
| ACAGACCAGCAGCACCTCAC+AGG | - | chr7.2:40826244-40826263 | MS.gene46129:CDS | 60.0% | |
| !! | CTCTTCCTGTGAGGTGCTGC+TGG | + | chr7.2:40826252-40826271 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 40826141 | 40826636 | 40826141 | ID=MS.gene46129 |
| chr7.2 | mRNA | 40826141 | 40826636 | 40826141 | ID=MS.gene46129.t1;Parent=MS.gene46129 |
| chr7.2 | exon | 40826466 | 40826636 | 40826466 | ID=MS.gene46129.t1.exon1;Parent=MS.gene46129.t1 |
| chr7.2 | CDS | 40826466 | 40826636 | 40826466 | ID=cds.MS.gene46129.t1;Parent=MS.gene46129.t1 |
| chr7.2 | exon | 40826219 | 40826341 | 40826219 | ID=MS.gene46129.t1.exon2;Parent=MS.gene46129.t1 |
| chr7.2 | CDS | 40826219 | 40826341 | 40826219 | ID=cds.MS.gene46129.t1;Parent=MS.gene46129.t1 |
| chr7.2 | exon | 40826141 | 40826143 | 40826141 | ID=MS.gene46129.t1.exon3;Parent=MS.gene46129.t1 |
| chr7.2 | CDS | 40826141 | 40826143 | 40826141 | ID=cds.MS.gene46129.t1;Parent=MS.gene46129.t1 |
| Gene Sequence |
| Protein sequence |
