Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07312.t1 | XP_003591385.1 | 96 | 224 | 9 | 0 | 1 | 224 | 37 | 260 | 6.30E-124 | 453.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07312.t1 | Q7XA78 | 35.2 | 210 | 118 | 6 | 4 | 203 | 53 | 254 | 2.2e-29 | 130.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07312.t1 | G7ICW5 | 96.0 | 224 | 9 | 0 | 1 | 224 | 37 | 260 | 4.5e-124 | 453.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene07312 | 0.853656 | 2.07E-61 | -1.69E-46 |
| MS.gene049171 | MS.gene07312 | 0.846599 | 1.96E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene07312 | 0.858956 | 5.77E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene07312 | 0.823241 | 1.54E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene07312 | 0.813604 | 2.35E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene07312 | 0.88897 | 3.68E-73 | -1.69E-46 |
| MS.gene049633 | MS.gene07312 | 0.827221 | 1.76E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene07312 | 0.8517 | 7.48E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene07312 | 0.808134 | 3.59E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene07312 | 0.819632 | 1.05E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene07312 | 0.826825 | 2.19E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene07312 | 0.823695 | 1.21E-53 | -1.69E-46 |
| MS.gene050507 | MS.gene07312 | 0.802923 | 4.46E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene07312 | 0.849871 | 2.45E-60 | -1.69E-46 |
| MS.gene050577 | MS.gene07312 | 0.81851 | 1.89E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene07312 | 0.832365 | 9.86E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene07312 | 0.852567 | 4.24E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene07312 | 0.817759 | 2.79E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene07312 | 0.814226 | 1.72E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene07312 | 0.883824 | 3.23E-71 | -1.69E-46 |
| MS.gene050772 | MS.gene07312 | 0.856985 | 2.22E-62 | -1.69E-46 |
| MS.gene05080 | MS.gene07312 | 0.86504 | 7.88E-65 | -1.69E-46 |
| MS.gene05081 | MS.gene07312 | 0.828597 | 8.23E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene07312 | 0.820878 | 5.44E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene07312 | 0.823061 | 1.70E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene07312 | 0.810643 | 1.04E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene07312 | 0.881936 | 1.59E-70 | -1.69E-46 |
| MS.gene05105 | MS.gene07312 | 0.866222 | 3.34E-65 | -1.69E-46 |
| MS.gene051387 | MS.gene07312 | 0.807374 | 5.22E-50 | -1.69E-46 |
| MS.gene051438 | MS.gene07312 | 0.823394 | 1.42E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene07312 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene051617 | MS.gene07312 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene07312 | 0.854645 | 1.07E-61 | -1.69E-46 |
| MS.gene051694 | MS.gene07312 | 0.817701 | 2.88E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene07312 | 0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene07312 | 0.813871 | 2.06E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene07312 | 0.877682 | 5.17E-69 | -1.69E-46 |
| MS.gene051858 | MS.gene07312 | 0.822236 | 2.64E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene07312 | 0.815962 | 7.07E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene07312 | 0.860141 | 2.54E-63 | -1.69E-46 |
| MS.gene052414 | MS.gene07312 | 0.817336 | 3.48E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene07312 | 0.840291 | 9.50E-58 | -1.69E-46 |
| MS.gene052481 | MS.gene07312 | 0.81216 | 4.88E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene07312 | 0.829337 | 5.45E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene07312 | 0.827689 | 1.36E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene07312 | 0.83572 | 1.42E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene07312 | 0.860629 | 1.81E-63 | -1.69E-46 |
| MS.gene052823 | MS.gene07312 | 0.824041 | 1.00E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene07312 | 0.824233 | 9.02E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene07312 | 0.803227 | 3.86E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene07312 | 0.81379 | 2.14E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene07312 | 0.818396 | 2.00E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene07312 | 0.863527 | 2.34E-64 | -1.69E-46 |
| MS.gene053203 | MS.gene07312 | 0.843442 | 1.40E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene07312 | 0.858612 | 7.31E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene07312 | 0.835096 | 2.05E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene07312 | 0.830696 | 2.54E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene07312 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene07312 | 0.807311 | 5.38E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene07312 | 0.867167 | 1.67E-65 | -1.69E-46 |
| MS.gene053579 | MS.gene07312 | 0.822355 | 2.48E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene07312 | 0.838909 | 2.17E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene07312 | 0.850341 | 1.81E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene07312 | 0.863431 | 2.50E-64 | -1.69E-46 |
| MS.gene053912 | MS.gene07312 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene07312 | 0.817149 | 3.83E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene07312 | 0.85373 | 1.97E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene07312 | 0.841749 | 3.93E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene07312 | 0.820307 | 7.35E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene07312 | 0.840408 | 8.85E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene07312 | -0.813865 | 2.06E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene07312 | 0.871793 | 5.21E-67 | -1.69E-46 |
| MS.gene05494 | MS.gene07312 | 0.829265 | 5.67E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene07312 | 0.804669 | 1.93E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene07312 | 0.840543 | 8.16E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene07312 | 0.8091 | 2.24E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene07312 | 0.831623 | 1.50E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene07312 | 0.829484 | 5.02E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene07312 | 0.824427 | 8.12E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene07312 | 0.831495 | 1.62E-55 | -1.69E-46 |
| MS.gene055539 | MS.gene07312 | 0.816964 | 4.21E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene07312 | 0.88121 | 2.90E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene07312 | 0.820724 | 5.90E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene07312 | 0.844985 | 5.39E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene07312 | 0.842086 | 3.21E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene07312 | 0.816506 | 5.34E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene07312 | 0.821493 | 3.92E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene07312 | 0.833209 | 6.08E-56 | -1.69E-46 |
| MS.gene056040 | MS.gene07312 | 0.826595 | 2.49E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene07312 | 0.819186 | 1.33E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene07312 | 0.835 | 2.16E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene07312 | 0.805841 | 1.10E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene07312 | 0.806057 | 9.89E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene07312 | 0.805737 | 1.16E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene07312 | 0.811354 | 7.30E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene07312 | 0.806375 | 8.48E-50 | -1.69E-46 |
| MS.gene056782 | MS.gene07312 | 0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene07312 | 0.812459 | 4.19E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene07312 | 0.814427 | 1.55E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene07312 | 0.836749 | 7.80E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene07312 | 0.84634 | 2.31E-59 | -1.69E-46 |
| MS.gene057124 | MS.gene07312 | 0.850536 | 1.59E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene07312 | 0.826815 | 2.21E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene07312 | 0.864435 | 1.22E-64 | -1.69E-46 |
| MS.gene057734 | MS.gene07312 | 0.818994 | 1.47E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene07312 | 0.820723 | 5.90E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene07312 | 0.80098 | 1.12E-48 | -1.69E-46 |
| MS.gene05787 | MS.gene07312 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene07312 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene07312 | 0.813124 | 3.00E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene07312 | 0.877936 | 4.21E-69 | -1.69E-46 |
| MS.gene058338 | MS.gene07312 | 0.806679 | 7.32E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene07312 | 0.815092 | 1.10E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene07312 | 0.87371 | 1.19E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene07312 | 0.833227 | 6.02E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene07312 | 0.828066 | 1.10E-54 | -1.69E-46 |
| MS.gene058448 | MS.gene07312 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene07312 | 0.84658 | 1.99E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene07312 | 0.839075 | 1.97E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene07312 | 0.835058 | 2.09E-56 | -1.69E-46 |
| MS.gene058748 | MS.gene07312 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene07312 | 0.825131 | 5.54E-54 | -1.69E-46 |
| MS.gene058838 | MS.gene07312 | 0.863071 | 3.23E-64 | -1.69E-46 |
| MS.gene05883 | MS.gene07312 | 0.803987 | 2.68E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene07312 | 0.836365 | 9.77E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene07312 | 0.819454 | 1.15E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene07312 | 0.874282 | 7.63E-68 | -1.69E-46 |
| MS.gene05914 | MS.gene07312 | 0.832183 | 1.09E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene07312 | 0.832716 | 8.06E-56 | -1.69E-46 |
| MS.gene059526 | MS.gene07312 | -0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene07312 | 0.813631 | 2.32E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene07312 | 0.846234 | 2.47E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene07312 | 0.831976 | 1.23E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene07312 | 0.816873 | 4.42E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene07312 | 0.803455 | 3.46E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene07312 | 0.869315 | 3.39E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene07312 | 0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene07312 | 0.812808 | 3.52E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene07312 | 0.81506 | 1.12E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene07312 | 0.814063 | 1.86E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene07312 | 0.803428 | 3.50E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene07312 | 0.839276 | 1.75E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene07312 | 0.823587 | 1.28E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene07312 | 0.847576 | 1.06E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene07312 | 0.812445 | 4.22E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene07312 | 0.884292 | 2.17E-71 | -1.69E-46 |
| MS.gene060982 | MS.gene07312 | 0.810171 | 1.32E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene07312 | 0.838784 | 2.34E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene07312 | 0.804651 | 1.95E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07312.t1 | MTR_1g086840 | 95.982 | 224 | 9 | 0 | 1 | 224 | 37 | 260 | 9.91e-163 | 449 |
| MS.gene07312.t1 | MTR_1g086840 | 84.409 | 186 | 26 | 2 | 1 | 185 | 37 | 220 | 3.12e-110 | 315 |
| MS.gene07312.t1 | MTR_7g095920 | 36.181 | 199 | 120 | 4 | 6 | 203 | 45 | 237 | 8.61e-38 | 132 |
| MS.gene07312.t1 | MTR_1g471050 | 36.082 | 194 | 117 | 4 | 11 | 203 | 53 | 240 | 7.91e-36 | 127 |
| MS.gene07312.t1 | MTR_3g080840 | 32.906 | 234 | 128 | 7 | 6 | 223 | 43 | 263 | 4.78e-35 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07312.t1 | AT4G01995 | 68.900 | 209 | 63 | 1 | 5 | 213 | 46 | 252 | 1.25e-100 | 293 |
| MS.gene07312.t1 | AT4G01995 | 68.900 | 209 | 63 | 1 | 5 | 213 | 15 | 221 | 1.46e-100 | 291 |
| MS.gene07312.t1 | AT4G01995 | 65.625 | 128 | 44 | 0 | 5 | 132 | 46 | 173 | 1.32e-51 | 166 |
| MS.gene07312.t1 | AT1G64680 | 36.098 | 205 | 110 | 6 | 8 | 200 | 36 | 231 | 2.64e-39 | 136 |
| MS.gene07312.t1 | AT1G03055 | 35.071 | 211 | 119 | 6 | 3 | 203 | 52 | 254 | 1.43e-36 | 129 |
| MS.gene07312.t1 | AT1G64680 | 34.463 | 177 | 95 | 6 | 8 | 172 | 36 | 203 | 1.61e-28 | 107 |
Find 74 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGTCACACCTGTGTTTC+TGG | 0.163795 | 1.4:-69217384 | None:intergenic |
| CAATTTGTTTCGCACCAAAT+TGG | 0.279978 | 1.4:+69215216 | MS.gene07312:CDS |
| TTTGTTTCCTCCATTCCTTT+TGG | 0.289746 | 1.4:+69216361 | MS.gene07312:CDS |
| GAAAATTACCGTAGCTTCTA+TGG | 0.292895 | 1.4:-69215450 | None:intergenic |
| TTAGGTTACCTGAACCAATT+TGG | 0.303056 | 1.4:-69215230 | None:intergenic |
| TTCAGGACGGTGTCATCTTC+AGG | 0.308272 | 1.4:-69217311 | None:intergenic |
| GACCTTCTTCAAGGATCATA+TGG | 0.328100 | 1.4:+69217124 | MS.gene07312:intron |
| TTAAATTTGCAGTTCAAATT+CGG | 0.342169 | 1.4:+69217272 | MS.gene07312:intron |
| AACCTGTGTTGGAAACTTAC+AGG | 0.345038 | 1.4:-69216806 | None:intergenic |
| GTCTACAGAATTGACTTTGC+AGG | 0.348660 | 1.4:-69216598 | None:intergenic |
| GTTTCGCACCAAATTGGTTC+AGG | 0.358197 | 1.4:+69215222 | MS.gene07312:CDS |
| TGTCGAAAGATGCAAGTATC+TGG | 0.367315 | 1.4:+69216750 | MS.gene07312:CDS |
| AAATGCTTCCCTACGAAGAT+TGG | 0.373694 | 1.4:+69217358 | MS.gene07312:CDS |
| CTTCCAAGCAAGGCTCCTTC+AGG | 0.383691 | 1.4:-69217328 | None:intergenic |
| TTAAATTTAGACCTTCTTCA+AGG | 0.416665 | 1.4:+69217115 | MS.gene07312:intron |
| GCAACTTTGCCTCCACCTAT+AGG | 0.420034 | 1.4:-69216407 | None:intergenic |
| ACAGCTATAATCAGCAAAGT+TGG | 0.429629 | 1.4:-69217168 | None:intergenic |
| TCAAAGAGTGAATACAAGCC+TGG | 0.439154 | 1.4:+69215172 | MS.gene07312:CDS |
| AGGCAAAGTTGCCGCTATAA+TGG | 0.445748 | 1.4:+69216418 | MS.gene07312:CDS |
| AATCTTCGTAGGGAAGCATT+TGG | 0.450960 | 1.4:-69217356 | None:intergenic |
| CTTTGCTGATTATAGCTGTC+AGG | 0.455452 | 1.4:+69217172 | MS.gene07312:CDS |
| CGTCCTGAAGGAGCCTTGCT+TGG | 0.459856 | 1.4:+69217325 | MS.gene07312:CDS |
| TCAATTAGTCCGTCATATCC+AGG | 0.477685 | 1.4:-69215383 | None:intergenic |
| AAAATGCTCATAGCTCCTAT+AGG | 0.484909 | 1.4:+69216392 | MS.gene07312:CDS |
| GATGGAACCTCATGGAATAG+TGG | 0.485415 | 1.4:+69216627 | MS.gene07312:CDS |
| TTACTGCACTTACTTGTCAA+TGG | 0.489234 | 1.4:+69216565 | MS.gene07312:CDS |
| ACCTTCTTCAAGGATCATAT+GGG | 0.499420 | 1.4:+69217125 | MS.gene07312:CDS |
| CAGCTATAATCAGCAAAGTT+GGG | 0.500940 | 1.4:-69217167 | None:intergenic |
| CGGTGTCATCTTCAGGAAGT+GGG | 0.502536 | 1.4:-69217304 | None:intergenic |
| TACCGTAGCTTCTATGGTAT+CGG | 0.506593 | 1.4:-69215444 | None:intergenic |
| ATGGAACCTCATGGAATAGT+GGG | 0.508469 | 1.4:+69216628 | MS.gene07312:CDS |
| GGATGGGACTCGAAGAAACC+TGG | 0.509195 | 1.4:+69215365 | MS.gene07312:CDS |
| CAAAGAGTGAATACAAGCCT+GGG | 0.509583 | 1.4:+69215173 | MS.gene07312:CDS |
| ACGGTGTCATCTTCAGGAAG+TGG | 0.512090 | 1.4:-69217305 | None:intergenic |
| TTTGGACATGCTTCCAAGCA+AGG | 0.516931 | 1.4:-69217338 | None:intergenic |
| ATATGTTCATGTCTTTGGGC+AGG | 0.520060 | 1.4:-69217405 | None:intergenic |
| GAAGAATCACTAACCTGTGT+TGG | 0.521242 | 1.4:-69216817 | None:intergenic |
| ACTTACTTGTCAATGGCTCA+TGG | 0.525178 | 1.4:+69216572 | MS.gene07312:CDS |
| TCTACAGAATTGACTTTGCA+GGG | 0.526670 | 1.4:-69216597 | None:intergenic |
| CTTACTTGTCAATGGCTCAT+GGG | 0.539633 | 1.4:+69216573 | MS.gene07312:CDS |
| CTCCGATACCATAGAAGCTA+CGG | 0.540098 | 1.4:+69215442 | MS.gene07312:CDS |
| TATGGGAGTTCCATTACTCA+TGG | 0.540166 | 1.4:+69217142 | MS.gene07312:CDS |
| TACTATAACAGGAAGTGGGA+TGG | 0.548952 | 1.4:+69215348 | MS.gene07312:intron |
| TTATAGAGCTCCAAAAGGAA+TGG | 0.549533 | 1.4:-69216371 | None:intergenic |
| ATTTGGTGCGAAACAAATTG+AGG | 0.552877 | 1.4:-69215213 | None:intergenic |
| TCCCATATGATCCTTGAAGA+AGG | 0.562632 | 1.4:-69217126 | None:intergenic |
| CTCATAGCTCCTATAGGTGG+AGG | 0.565279 | 1.4:+69216398 | MS.gene07312:CDS |
| TAGTGCCTTTCATCATTAGA+CGG | 0.569097 | 1.4:-69215415 | None:intergenic |
| AAAATACTATAACAGGAAGT+GGG | 0.571265 | 1.4:+69215344 | MS.gene07312:intron |
| AAGTTGGGCTCCATGAGTAA+TGG | 0.572536 | 1.4:-69217152 | None:intergenic |
| TCGAAGAAACCTGGATATGA+CGG | 0.573061 | 1.4:+69215374 | MS.gene07312:CDS |
| ACTATAACAGGAAGTGGGAT+GGG | 0.573427 | 1.4:+69215349 | MS.gene07312:intron |
| TGAAGATGACACCGTCCTGA+AGG | 0.575565 | 1.4:+69217313 | MS.gene07312:CDS |
| TCTGGAAGCCAATCTTCGTA+GGG | 0.579827 | 1.4:-69217366 | None:intergenic |
| ACCTATCAGATGGAACCTCA+TGG | 0.586052 | 1.4:+69216619 | MS.gene07312:CDS |
| AACAAATCATCAATAACCCC+AGG | 0.586570 | 1.4:-69215190 | None:intergenic |
| TCCATGAGGTTCCATCTGAT+AGG | 0.590896 | 1.4:-69216620 | None:intergenic |
| CACCTGTAAGTTTCCAACAC+AGG | 0.597620 | 1.4:+69216804 | MS.gene07312:CDS |
| TTCTGGAAGCCAATCTTCGT+AGG | 0.598210 | 1.4:-69217367 | None:intergenic |
| AAAGTTGCCGCTATAATGGT+TGG | 0.601706 | 1.4:+69216422 | MS.gene07312:CDS |
| CTGGAGGAAAGCAAGTGTGT+TGG | 0.610904 | 1.4:+69216769 | MS.gene07312:CDS |
| AATTCTGTAGACCTATCAGA+TGG | 0.614406 | 1.4:+69216609 | MS.gene07312:CDS |
| TAGAGCTCCAAAAGGAATGG+AGG | 0.615600 | 1.4:-69216368 | None:intergenic |
| GCTAACCGTCTAATGATGAA+AGG | 0.626704 | 1.4:+69215410 | MS.gene07312:CDS |
| ATGCTCATAGCTCCTATAGG+TGG | 0.633669 | 1.4:+69216395 | MS.gene07312:CDS |
| CGAAAGATGCAAGTATCTGG+AGG | 0.640761 | 1.4:+69216753 | MS.gene07312:CDS |
| GGTGTCATCTTCAGGAAGTG+GGG | 0.642463 | 1.4:-69217303 | None:intergenic |
| CAAGCAAGGCTCCTTCAGGA+CGG | 0.652728 | 1.4:-69217324 | None:intergenic |
| GTGTCATCTTCAGGAAGTGG+GGG | 0.656581 | 1.4:-69217302 | None:intergenic |
| AGATTGGCTTCCAGAAACAC+AGG | 0.677702 | 1.4:+69217374 | MS.gene07312:CDS |
| AGACTCACCAACCATTATAG+CGG | 0.701172 | 1.4:-69216429 | None:intergenic |
| TGGAACCTCATGGAATAGTG+GGG | 0.705163 | 1.4:+69216629 | MS.gene07312:CDS |
| AAAGAGTGAATACAAGCCTG+GGG | 0.716715 | 1.4:+69215174 | MS.gene07312:CDS |
| GATCACCCCACTATTCCATG+AGG | 0.750720 | 1.4:-69216634 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTAAATAAATGTTTA+AGG | - | chr1.4:69216535-69216554 | None:intergenic | 10.0% |
| !! | ATATATGAATATGATTAATG+TGG | + | chr1.4:69215305-69215324 | MS.gene07312:intron | 15.0% |
| !! | AAAGCTATAAATAAGTTAAC+TGG | - | chr1.4:69215265-69215284 | None:intergenic | 20.0% |
| !! | AAATATTACGTATTCTCTTA+TGG | + | chr1.4:69217199-69217218 | MS.gene07312:intron | 20.0% |
| !! | AAATCCTAAGATGATAAAAA+TGG | + | chr1.4:69215894-69215913 | MS.gene07312:intron | 20.0% |
| !! | AAGTTTAGAAGAATCATATA+AGG | - | chr1.4:69216272-69216291 | None:intergenic | 20.0% |
| !! | AGATTATCAAACTGTTTATA+AGG | + | chr1.4:69215659-69215678 | MS.gene07312:intron | 20.0% |
| !! | ATTTGAACTGCAAATTTAAA+AGG | - | chr1.4:69217271-69217290 | None:intergenic | 20.0% |
| !! | GAATAAGTAACATTGTATTA+CGG | - | chr1.4:69216174-69216193 | None:intergenic | 20.0% |
| !! | TATAAATAAGTTAACTGGAA+GGG | - | chr1.4:69215260-69215279 | None:intergenic | 20.0% |
| !! | TATGTACTATAAAATGTTGT+AGG | + | chr1.4:69216723-69216742 | MS.gene07312:intron | 20.0% |
| !! | TTAAATTTGCAGTTCAAATT+CGG | + | chr1.4:69217272-69217291 | MS.gene07312:intron | 20.0% |
| !!! | AGATAAGAATTTGATGTTTT+TGG | + | chr1.4:69215956-69215975 | MS.gene07312:intron | 20.0% |
| !!! | ATAAGAATTTGATGTTTTTG+GGG | + | chr1.4:69215958-69215977 | MS.gene07312:intron | 20.0% |
| !!! | GATAAGAATTTGATGTTTTT+GGG | + | chr1.4:69215957-69215976 | MS.gene07312:intron | 20.0% |
| !!! | TAATACAATGTTACTTATTC+TGG | + | chr1.4:69216174-69216193 | MS.gene07312:intron | 20.0% |
| !!! | TTATTTAAGTTTTGAAGCAA+GGG | + | chr1.4:69216542-69216561 | MS.gene07312:intron | 20.0% |
| !!! | TTTATTTAAGTTTTGAAGCA+AGG | + | chr1.4:69216541-69216560 | MS.gene07312:intron | 20.0% |
| !!! | TTTTAGAAAGAAAGAAAAGA+GGG | + | chr1.4:69215282-69215301 | MS.gene07312:intron | 20.0% |
| ! | AAAATACTATAACAGGAAGT+GGG | + | chr1.4:69215344-69215363 | MS.gene07312:intron | 25.0% |
| ! | ATAAATAAGTTAACTGGAAG+GGG | - | chr1.4:69215259-69215278 | None:intergenic | 25.0% |
| ! | ATACTAACATGAAAAAACCA+AGG | - | chr1.4:69217027-69217046 | None:intergenic | 25.0% |
| ! | ATGAATATGATTAATGTGGT+GGG | + | chr1.4:69215309-69215328 | MS.gene07312:intron | 25.0% |
| ! | CTATAAATAAGTTAACTGGA+AGG | - | chr1.4:69215261-69215280 | None:intergenic | 25.0% |
| ! | GAGTATGAAAATACTATAAC+AGG | + | chr1.4:69215337-69215356 | MS.gene07312:intron | 25.0% |
| ! | GAGTTCAAATTTATATGATG+AGG | + | chr1.4:69217221-69217240 | MS.gene07312:intron | 25.0% |
| ! | TACTAACATGAAAAAACCAA+GGG | - | chr1.4:69217026-69217045 | None:intergenic | 25.0% |
| ! | TAGTTATCTTTGCGAAAAAA+TGG | + | chr1.4:69216073-69216092 | MS.gene07312:intron | 25.0% |
| ! | TATGAATATGATTAATGTGG+TGG | + | chr1.4:69215308-69215327 | MS.gene07312:intron | 25.0% |
| ! | TCATCTTGTATTATTGAAAG+TGG | + | chr1.4:69216698-69216717 | MS.gene07312:intron | 25.0% |
| ! | TGATTCTTCTAAACTTTGAA+TGG | + | chr1.4:69216276-69216295 | MS.gene07312:intron | 25.0% |
| ! | TTAAATTTAGACCTTCTTCA+AGG | + | chr1.4:69217115-69217134 | MS.gene07312:intron | 25.0% |
| !! | TAAATTTTGTGTGACTGTTT+AGG | + | chr1.4:69215621-69215640 | MS.gene07312:intron | 25.0% |
| !!! | ATATAAACCTTTTGAAACCA+TGG | - | chr1.4:69215543-69215562 | None:intergenic | 25.0% |
| !!! | CTTTTAGAAAGAAAGAAAAG+AGG | + | chr1.4:69215281-69215300 | MS.gene07312:intron | 25.0% |
| !!! | GTTTCCATTTTTATCATCTT+AGG | - | chr1.4:69215901-69215920 | None:intergenic | 25.0% |
| !!! | TTTGAAGTTGTTGCATTTTA+TGG | + | chr1.4:69217071-69217090 | MS.gene07312:intron | 25.0% |
| AGCTTTACTTTCTCTTTCTA+AGG | - | chr1.4:69215850-69215869 | None:intergenic | 30.0% | |
| GAAAATACTATAACAGGAAG+TGG | + | chr1.4:69215343-69215362 | MS.gene07312:intron | 30.0% | |
| TCAGTTAAAGACAAATCGTT+TGG | - | chr1.4:69216978-69216997 | None:intergenic | 30.0% | |
| ! | AAGTTGTTGCATTTTATGGA+TGG | + | chr1.4:69217075-69217094 | MS.gene07312:intron | 30.0% |
| ! | GAAAGAGAAAGTAAAGCTTT+TGG | + | chr1.4:69215852-69215871 | MS.gene07312:intron | 30.0% |
| !! | TGAAGTGGATTGGAATAAAA+CGG | - | chr1.4:69216122-69216141 | None:intergenic | 30.0% |
| AAAATGCTCATAGCTCCTAT+AGG | + | chr1.4:69216392-69216411 | MS.gene07312:CDS | 35.0% | |
| AAATGCAACAACTTCAAAGC+TGG | - | chr1.4:69217069-69217088 | None:intergenic | 35.0% | |
| AACAAATCATCAATAACCCC+AGG | - | chr1.4:69215193-69215212 | None:intergenic | 35.0% | |
| AACTCTCAAAACCAAAATGG+TGG | - | chr1.4:69216001-69216020 | None:intergenic | 35.0% | |
| AATTCTGTAGACCTATCAGA+TGG | + | chr1.4:69216609-69216628 | MS.gene07312:CDS | 35.0% | |
| ACAGCTATAATCAGCAAAGT+TGG | - | chr1.4:69217171-69217190 | None:intergenic | 35.0% | |
| ACATGAAAAAACCAAGGGAT+CGG | - | chr1.4:69217021-69217040 | None:intergenic | 35.0% | |
| ACATTGTATTACGGTATGTC+TGG | - | chr1.4:69216165-69216184 | None:intergenic | 35.0% | |
| ACCAAAACCATGGTTTCAAA+AGG | + | chr1.4:69215533-69215552 | MS.gene07312:intron | 35.0% | |
| ACCTTCTTCAAGGATCATAT+GGG | + | chr1.4:69217125-69217144 | MS.gene07312:CDS | 35.0% | |
| CAGCTATAATCAGCAAAGTT+GGG | - | chr1.4:69217170-69217189 | None:intergenic | 35.0% | |
| CCAAACTCTCAAAACCAAAA+TGG | - | chr1.4:69216004-69216023 | None:intergenic | 35.0% | |
| GAAAATTACCGTAGCTTCTA+TGG | - | chr1.4:69215453-69215472 | None:intergenic | 35.0% | |
| GGTATAGATCAGGTATGTTT+GGG | + | chr1.4:69216022-69216041 | MS.gene07312:intron | 35.0% | |
| TAGAGTTGAATGAAGTGGAT+TGG | - | chr1.4:69216132-69216151 | None:intergenic | 35.0% | |
| TAGTGCCTTTCATCATTAGA+CGG | - | chr1.4:69215418-69215437 | None:intergenic | 35.0% | |
| TCATAATAAGCACTTGTGAG+CGG | + | chr1.4:69215803-69215822 | MS.gene07312:intron | 35.0% | |
| TGGTATAGAGTTGAATGAAG+TGG | - | chr1.4:69216137-69216156 | None:intergenic | 35.0% | |
| TGGTATAGATCAGGTATGTT+TGG | + | chr1.4:69216021-69216040 | MS.gene07312:intron | 35.0% | |
| TTACTGCACTTACTTGTCAA+TGG | + | chr1.4:69216565-69216584 | MS.gene07312:CDS | 35.0% | |
| TTAGGTTACCTGAACCAATT+TGG | - | chr1.4:69215233-69215252 | None:intergenic | 35.0% | |
| TTATAGAGCTCCAAAAGGAA+TGG | - | chr1.4:69216374-69216393 | None:intergenic | 35.0% | |
| TTCCTTACAAACCAAAACCA+TGG | + | chr1.4:69215523-69215542 | MS.gene07312:intron | 35.0% | |
| TTGAGAGTTTGGTATAGATC+AGG | + | chr1.4:69216012-69216031 | MS.gene07312:intron | 35.0% | |
| TTTCAGTCAGGATTTGAACT+CGG | + | chr1.4:69216946-69216965 | MS.gene07312:intron | 35.0% | |
| ! | AATATGATTAATGTGGTGGG+TGG | + | chr1.4:69215312-69215331 | MS.gene07312:intron | 35.0% |
| ! | CAATTTGTTTCGCACCAAAT+TGG | + | chr1.4:69215216-69215235 | MS.gene07312:CDS | 35.0% |
| ! | GCATTTTATAGAGCTCCAAA+AGG | - | chr1.4:69216379-69216398 | None:intergenic | 35.0% |
| ! | TAGCACTTATGTCTTGTTAC+AGG | + | chr1.4:69216322-69216341 | MS.gene07312:intron | 35.0% |
| ! | TCTACAGAATTGACTTTGCA+GGG | - | chr1.4:69216600-69216619 | None:intergenic | 35.0% |
| ! | TGTTACAGGTACGAATTTTG+AGG | + | chr1.4:69216336-69216355 | MS.gene07312:intron | 35.0% |
| ! | TTTGTTTCCTCCATTCCTTT+TGG | + | chr1.4:69216361-69216380 | MS.gene07312:CDS | 35.0% |
| !! | AGCTGTTTTCATAAGCTATC+TGG | - | chr1.4:69215712-69215731 | None:intergenic | 35.0% |
| !! | ATTTGGTGCGAAACAAATTG+AGG | - | chr1.4:69215216-69215235 | None:intergenic | 35.0% |
| !!! | AACCATGGTTTTGGTTTGTA+AGG | - | chr1.4:69215528-69215547 | None:intergenic | 35.0% |
| !!! | ACCTTTTGAAACCATGGTTT+TGG | - | chr1.4:69215537-69215556 | None:intergenic | 35.0% |
| !!! | CCATTTTGGTTTTGAGAGTT+TGG | + | chr1.4:69216001-69216020 | MS.gene07312:intron | 35.0% |
| !!! | GAATTTGATGTTTTTGGGGA+TGG | + | chr1.4:69215962-69215981 | MS.gene07312:intron | 35.0% |
| AAAGAGTGAATACAAGCCTG+GGG | + | chr1.4:69215174-69215193 | MS.gene07312:CDS | 40.0% | |
| AAAGTTGCCGCTATAATGGT+TGG | + | chr1.4:69216422-69216441 | MS.gene07312:CDS | 40.0% | |
| AAATGCTTCCCTACGAAGAT+TGG | + | chr1.4:69217358-69217377 | MS.gene07312:CDS | 40.0% | |
| AACCTGTGTTGGAAACTTAC+AGG | - | chr1.4:69216809-69216828 | None:intergenic | 40.0% | |
| ACTATAACAGGAAGTGGGAT+GGG | + | chr1.4:69215349-69215368 | MS.gene07312:intron | 40.0% | |
| ACTTACTTGTCAATGGCTCA+TGG | + | chr1.4:69216572-69216591 | MS.gene07312:CDS | 40.0% | |
| AGACTCACCAACCATTATAG+CGG | - | chr1.4:69216432-69216451 | None:intergenic | 40.0% | |
| AGTCATAAACACACAGCGAA+AGG | - | chr1.4:69216667-69216686 | None:intergenic | 40.0% | |
| ATCCTGACTGAAACAATCAC+TGG | - | chr1.4:69216939-69216958 | None:intergenic | 40.0% | |
| ATGGAACCTCATGGAATAGT+GGG | + | chr1.4:69216628-69216647 | MS.gene07312:CDS | 40.0% | |
| CAAAGAGTGAATACAAGCCT+GGG | + | chr1.4:69215173-69215192 | MS.gene07312:CDS | 40.0% | |
| CTTACTTGTCAATGGCTCAT+GGG | + | chr1.4:69216573-69216592 | MS.gene07312:CDS | 40.0% | |
| GAAGAATCACTAACCTGTGT+TGG | - | chr1.4:69216820-69216839 | None:intergenic | 40.0% | |
| GACCGAGGGTAACAAAATTA+TGG | + | chr1.4:69216913-69216932 | MS.gene07312:intron | 40.0% | |
| GACCTTCTTCAAGGATCATA+TGG | + | chr1.4:69217124-69217143 | MS.gene07312:intron | 40.0% | |
| GCTAACCGTCTAATGATGAA+AGG | + | chr1.4:69215410-69215429 | MS.gene07312:CDS | 40.0% | |
| GGTGTATGTGTATCCAAACA+GGG | + | chr1.4:69215824-69215843 | MS.gene07312:intron | 40.0% | |
| TACCGTAGCTTCTATGGTAT+CGG | - | chr1.4:69215447-69215466 | None:intergenic | 40.0% | |
| TACTATAACAGGAAGTGGGA+TGG | + | chr1.4:69215348-69215367 | MS.gene07312:intron | 40.0% | |
| TAGATCAGGTATGTTTGGGT+TGG | + | chr1.4:69216026-69216045 | MS.gene07312:intron | 40.0% | |
| TATGGGAGTTCCATTACTCA+TGG | + | chr1.4:69217142-69217161 | MS.gene07312:CDS | 40.0% | |
| TCAAAGAGTGAATACAAGCC+TGG | + | chr1.4:69215172-69215191 | MS.gene07312:CDS | 40.0% | |
| TCAATTAGTCCGTCATATCC+AGG | - | chr1.4:69215386-69215405 | None:intergenic | 40.0% | |
| TCCCATATGATCCTTGAAGA+AGG | - | chr1.4:69217129-69217148 | None:intergenic | 40.0% | |
| TCGAAGAAACCTGGATATGA+CGG | + | chr1.4:69215374-69215393 | MS.gene07312:CDS | 40.0% | |
| TGTCGAAAGATGCAAGTATC+TGG | + | chr1.4:69216750-69216769 | MS.gene07312:CDS | 40.0% | |
| ! | AAGTGCTAACAAACTTGCTC+TGG | - | chr1.4:69216310-69216329 | None:intergenic | 40.0% |
| ! | CTTTGCTGATTATAGCTGTC+AGG | + | chr1.4:69217172-69217191 | MS.gene07312:CDS | 40.0% |
| ! | GATATCTAGAGTTTGACCGA+GGG | + | chr1.4:69216899-69216918 | MS.gene07312:intron | 40.0% |
| ! | GGCCATAATTTTGTTACCCT+CGG | - | chr1.4:69216918-69216937 | None:intergenic | 40.0% |
| ! | GTCTACAGAATTGACTTTGC+AGG | - | chr1.4:69216601-69216620 | None:intergenic | 40.0% |
| ! | TTACGGTATGTCTGGAATTG+TGG | - | chr1.4:69216157-69216176 | None:intergenic | 40.0% |
| !! | AATCTTCGTAGGGAAGCATT+TGG | - | chr1.4:69217359-69217378 | None:intergenic | 40.0% |
| !! | TCACTAGCTTGTTACGTTCA+GGG | - | chr1.4:69216498-69216517 | None:intergenic | 40.0% |
| !!! | TTGATGTTTTTGGGGATGGA+TGG | + | chr1.4:69215966-69215985 | MS.gene07312:intron | 40.0% |
| AACATTTGAGTCCGATCCCT+TGG | + | chr1.4:69217007-69217026 | MS.gene07312:intron | 45.0% | |
| AAGTTGGGCTCCATGAGTAA+TGG | - | chr1.4:69217155-69217174 | None:intergenic | 45.0% | |
| ACCTATCAGATGGAACCTCA+TGG | + | chr1.4:69216619-69216638 | MS.gene07312:CDS | 45.0% | |
| AGGCAAAGTTGCCGCTATAA+TGG | + | chr1.4:69216418-69216437 | MS.gene07312:CDS | 45.0% | |
| ATATCCCTTCCCATGAGAAC+TGG | - | chr1.4:69216884-69216903 | None:intergenic | 45.0% | |
| ATGCTCATAGCTCCTATAGG+TGG | + | chr1.4:69216395-69216414 | MS.gene07312:CDS | 45.0% | |
| CACCTGTAAGTTTCCAACAC+AGG | + | chr1.4:69216804-69216823 | MS.gene07312:CDS | 45.0% | |
| CGAAAGATGCAAGTATCTGG+AGG | + | chr1.4:69216753-69216772 | MS.gene07312:CDS | 45.0% | |
| CGGTGTATGTGTATCCAAAC+AGG | + | chr1.4:69215823-69215842 | MS.gene07312:intron | 45.0% | |
| CTCCGATACCATAGAAGCTA+CGG | + | chr1.4:69215442-69215461 | MS.gene07312:CDS | 45.0% | |
| GATGGAACCTCATGGAATAG+TGG | + | chr1.4:69216627-69216646 | MS.gene07312:CDS | 45.0% | |
| TAGAGCTCCAAAAGGAATGG+AGG | - | chr1.4:69216371-69216390 | None:intergenic | 45.0% | |
| TCCATGAGGTTCCATCTGAT+AGG | - | chr1.4:69216623-69216642 | None:intergenic | 45.0% | |
| TCTGGAAGCCAATCTTCGTA+GGG | - | chr1.4:69217369-69217388 | None:intergenic | 45.0% | |
| TGGAACCTCATGGAATAGTG+GGG | + | chr1.4:69216629-69216648 | MS.gene07312:CDS | 45.0% | |
| TTTGGACATGCTTCCAAGCA+AGG | - | chr1.4:69217341-69217360 | None:intergenic | 45.0% | |
| ! | GGATATCTAGAGTTTGACCG+AGG | + | chr1.4:69216898-69216917 | MS.gene07312:intron | 45.0% |
| ! | GGCAAAGATCTCCACCATTT+TGG | + | chr1.4:69215987-69216006 | MS.gene07312:intron | 45.0% |
| ! | GTTTCGCACCAAATTGGTTC+AGG | + | chr1.4:69215222-69215241 | MS.gene07312:CDS | 45.0% |
| ! | TTCTGGAAGCCAATCTTCGT+AGG | - | chr1.4:69217370-69217389 | None:intergenic | 45.0% |
| !! | AGATTGGCTTCCAGAAACAC+AGG | + | chr1.4:69217374-69217393 | MS.gene07312:CDS | 45.0% |
| !! | ATCAGGTATGTTTGGGTTGG+TGG | + | chr1.4:69216029-69216048 | MS.gene07312:intron | 45.0% |
| !! | CACTAGCTTGTTACGTTCAG+GGG | - | chr1.4:69216497-69216516 | None:intergenic | 45.0% |
| !! | CTCACTAGCTTGTTACGTTC+AGG | - | chr1.4:69216499-69216518 | None:intergenic | 45.0% |
| !! | TCTCTTTCTAAGGCCCTGTT+TGG | - | chr1.4:69215840-69215859 | None:intergenic | 45.0% |
| CTCATAGCTCCTATAGGTGG+AGG | + | chr1.4:69216398-69216417 | MS.gene07312:CDS | 50.0% | |
| CTGGAGGAAAGCAAGTGTGT+TGG | + | chr1.4:69216769-69216788 | MS.gene07312:CDS | 50.0% | |
| CTTAAGCCGCCAGTTCTCAT+GGG | + | chr1.4:69216872-69216891 | MS.gene07312:intron | 50.0% | |
| GATCACCCCACTATTCCATG+AGG | - | chr1.4:69216637-69216656 | None:intergenic | 50.0% | |
| GCAACTTTGCCTCCACCTAT+AGG | - | chr1.4:69216410-69216429 | None:intergenic | 50.0% | |
| GGCCAGTGATTGTTTCAGTC+AGG | + | chr1.4:69216934-69216953 | MS.gene07312:intron | 50.0% | |
| GTGTCATCTTCAGGAAGTGG+GGG | - | chr1.4:69217305-69217324 | None:intergenic | 50.0% | |
| GTTAACTGGAAGGGGCTGTT+AGG | - | chr1.4:69215251-69215270 | None:intergenic | 50.0% | |
| TCTTAAGCCGCCAGTTCTCA+TGG | + | chr1.4:69216871-69216890 | MS.gene07312:intron | 50.0% | |
| TGAAGATGACACCGTCCTGA+AGG | + | chr1.4:69217313-69217332 | MS.gene07312:CDS | 50.0% | |
| ! | GGTGTCATCTTCAGGAAGTG+GGG | - | chr1.4:69217306-69217325 | None:intergenic | 50.0% |
| !! | ACGGTGTCATCTTCAGGAAG+TGG | - | chr1.4:69217308-69217327 | None:intergenic | 50.0% |
| !! | CGGTGTCATCTTCAGGAAGT+GGG | - | chr1.4:69217307-69217326 | None:intergenic | 50.0% |
| !! | TTCAGGACGGTGTCATCTTC+AGG | - | chr1.4:69217314-69217333 | None:intergenic | 50.0% |
| CAAGCAAGGCTCCTTCAGGA+CGG | - | chr1.4:69217327-69217346 | None:intergenic | 55.0% | |
| CTTCCAAGCAAGGCTCCTTC+AGG | - | chr1.4:69217331-69217350 | None:intergenic | 55.0% | |
| GGATGGGACTCGAAGAAACC+TGG | + | chr1.4:69215365-69215384 | MS.gene07312:CDS | 55.0% | |
| GGCAGTCACACCTGTGTTTC+TGG | - | chr1.4:69217387-69217406 | None:intergenic | 55.0% | |
| TCCCTTCCCATGAGAACTGG+CGG | - | chr1.4:69216881-69216900 | None:intergenic | 55.0% | |
| !! | GGTTGGTGGCTAGAGTGGAA+TGG | + | chr1.4:69216043-69216062 | MS.gene07312:intron | 55.0% |
| !! | GTTTGGGTTGGTGGCTAGAG+TGG | + | chr1.4:69216038-69216057 | MS.gene07312:intron | 55.0% |
| AGCCGCCAGTTCTCATGGGA+AGG | + | chr1.4:69216876-69216895 | MS.gene07312:intron | 60.0% | |
| CGTCCTGAAGGAGCCTTGCT+TGG | + | chr1.4:69217325-69217344 | MS.gene07312:CDS | 60.0% | |
| GCCGCCAGTTCTCATGGGAA+GGG | + | chr1.4:69216877-69216896 | MS.gene07312:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 69215154 | 69217421 | 69215154 | ID=MS.gene07312 |
| chr1.4 | mRNA | 69215154 | 69217421 | 69215154 | ID=MS.gene07312.t1;Parent=MS.gene07312 |
| chr1.4 | exon | 69215154 | 69215243 | 69215154 | ID=MS.gene07312.t1.exon1;Parent=MS.gene07312.t1 |
| chr1.4 | CDS | 69215154 | 69215243 | 69215154 | ID=cds.MS.gene07312.t1;Parent=MS.gene07312.t1 |
| chr1.4 | exon | 69215359 | 69215463 | 69215359 | ID=MS.gene07312.t1.exon2;Parent=MS.gene07312.t1 |
| chr1.4 | CDS | 69215359 | 69215463 | 69215359 | ID=cds.MS.gene07312.t1;Parent=MS.gene07312.t1 |
| chr1.4 | exon | 69216344 | 69216443 | 69216344 | ID=MS.gene07312.t1.exon3;Parent=MS.gene07312.t1 |
| chr1.4 | CDS | 69216344 | 69216443 | 69216344 | ID=cds.MS.gene07312.t1;Parent=MS.gene07312.t1 |
| chr1.4 | exon | 69216559 | 69216650 | 69216559 | ID=MS.gene07312.t1.exon4;Parent=MS.gene07312.t1 |
| chr1.4 | CDS | 69216559 | 69216650 | 69216559 | ID=cds.MS.gene07312.t1;Parent=MS.gene07312.t1 |
| chr1.4 | exon | 69216745 | 69216825 | 69216745 | ID=MS.gene07312.t1.exon5;Parent=MS.gene07312.t1 |
| chr1.4 | CDS | 69216745 | 69216825 | 69216745 | ID=cds.MS.gene07312.t1;Parent=MS.gene07312.t1 |
| chr1.4 | exon | 69217125 | 69217193 | 69217125 | ID=MS.gene07312.t1.exon6;Parent=MS.gene07312.t1 |
| chr1.4 | CDS | 69217125 | 69217193 | 69217125 | ID=cds.MS.gene07312.t1;Parent=MS.gene07312.t1 |
| chr1.4 | exon | 69217284 | 69217421 | 69217284 | ID=MS.gene07312.t1.exon7;Parent=MS.gene07312.t1 |
| chr1.4 | CDS | 69217284 | 69217421 | 69217284 | ID=cds.MS.gene07312.t1;Parent=MS.gene07312.t1 |
| Gene Sequence |
| Protein sequence |
