Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065217.t1 | RHN41569.1 | 90.8 | 336 | 31 | 0 | 1 | 336 | 42 | 377 | 1.50E-177 | 632.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065217.t1 | Q8W013 | 52.5 | 335 | 157 | 1 | 2 | 336 | 31 | 363 | 1.6e-103 | 377.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065217.t1 | A0A396GKB4 | 90.8 | 336 | 31 | 0 | 1 | 336 | 42 | 377 | 1.1e-177 | 632.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene065217 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene049217 | MS.gene065217 | 0.843498 | 1.35E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene065217 | 0.85319 | 2.81E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene065217 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene065217 | 0.841857 | 3.69E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene065217 | 0.827258 | 1.73E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene065217 | 0.836893 | 7.16E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene065217 | -0.804052 | 2.60E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene065217 | 0.832134 | 1.12E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene065217 | 0.839499 | 1.53E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene065217 | 0.829907 | 3.96E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene065217 | 0.842529 | 2.45E-58 | -1.69E-46 |
| MS.gene050353 | MS.gene065217 | -0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene065217 | 0.827617 | 1.42E-54 | -1.69E-46 |
| MS.gene050518 | MS.gene065217 | 0.816787 | 4.62E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene065217 | 0.807467 | 4.98E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene065217 | 0.810943 | 8.96E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene065217 | 0.815135 | 1.08E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene065217 | 0.809765 | 1.61E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene065217 | 0.801775 | 7.68E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene065217 | 0.837021 | 6.65E-57 | -1.69E-46 |
| MS.gene050770 | MS.gene065217 | 0.800577 | 1.35E-48 | -1.69E-46 |
| MS.gene050772 | MS.gene065217 | 0.85997 | 2.86E-63 | -1.69E-46 |
| MS.gene050868 | MS.gene065217 | 0.806056 | 9.90E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene065217 | 0.805853 | 1.09E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene065217 | 0.836322 | 1.00E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene065217 | 0.813254 | 2.81E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene065217 | 0.815081 | 1.11E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene065217 | 0.806626 | 7.51E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene065217 | 0.800008 | 1.76E-48 | -1.69E-46 |
| MS.gene051694 | MS.gene065217 | 0.826036 | 3.38E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene065217 | 0.812801 | 3.53E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene065217 | 0.820419 | 6.93E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene065217 | 0.812078 | 5.08E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene065217 | 0.808055 | 3.74E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene065217 | 0.844277 | 8.35E-59 | -1.69E-46 |
| MS.gene052421 | MS.gene065217 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene065217 | 0.818424 | 1.97E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene065217 | 0.838911 | 2.17E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene065217 | 0.804103 | 2.54E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene065217 | 0.812419 | 4.28E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene065217 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene065217 | 0.85468 | 1.05E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene065217 | 0.849066 | 4.10E-60 | -1.69E-46 |
| MS.gene053322 | MS.gene065217 | 0.831337 | 1.77E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene065217 | 0.842313 | 2.79E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene065217 | 0.800866 | 1.18E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene065217 | 0.828537 | 8.51E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene065217 | 0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene065217 | 0.812289 | 4.57E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene065217 | 0.805394 | 1.36E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene065217 | 0.858463 | 8.10E-63 | -1.69E-46 |
| MS.gene054706 | MS.gene065217 | -0.805349 | 1.39E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene065217 | 0.80102 | 1.10E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene065217 | 0.809361 | 1.97E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene065217 | 0.830259 | 3.25E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene065217 | 0.805651 | 1.20E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene065217 | 0.819766 | 9.78E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene065217 | 0.827912 | 1.20E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene065217 | 0.827276 | 1.71E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene065217 | 0.845876 | 3.09E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene065217 | 0.825254 | 5.18E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene065217 | 0.81137 | 7.24E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene065217 | 0.845563 | 3.76E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene065217 | 0.801597 | 8.35E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene065217 | 0.80825 | 3.40E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene065217 | 0.820005 | 8.62E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene065217 | 0.819311 | 1.24E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene065217 | 0.807919 | 3.99E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene065217 | 0.814659 | 1.38E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene065217 | 0.84727 | 1.29E-59 | -1.69E-46 |
| MS.gene056692 | MS.gene065217 | 0.809744 | 1.63E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene065217 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene065217 | 0.825413 | 4.75E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene065217 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene065217 | 0.845095 | 5.03E-59 | -1.69E-46 |
| MS.gene057926 | MS.gene065217 | 0.828522 | 8.58E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene065217 | 0.810441 | 1.15E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene065217 | 0.810792 | 9.66E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene065217 | 0.824597 | 7.40E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene065217 | 0.818205 | 2.21E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene065217 | 0.84395 | 1.02E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene065217 | 0.828337 | 9.51E-55 | -1.69E-46 |
| MS.gene058840 | MS.gene065217 | -0.810957 | 8.90E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene065217 | 0.831114 | 2.01E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene065217 | 0.813644 | 2.31E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene065217 | 0.808342 | 3.25E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene065217 | 0.814727 | 1.33E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene065217 | 0.800721 | 1.26E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene065217 | 0.850635 | 1.49E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene065217 | 0.834002 | 3.86E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene065217 | 0.80611 | 9.65E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene065217 | 0.854963 | 8.67E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene065217 | 0.802499 | 5.45E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene065217 | 0.804072 | 2.57E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene065217 | 0.818877 | 1.56E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene065217 | 0.817728 | 2.84E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene065217 | 0.827732 | 1.33E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene065217 | 0.831921 | 1.27E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene065217 | 0.803974 | 2.70E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene065217 | 0.819235 | 1.29E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene065217 | 0.826179 | 3.13E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene065217 | 0.80956 | 1.78E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene065217 | 0.813216 | 2.86E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene065217 | 0.827575 | 1.45E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene065217 | 0.836908 | 7.10E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene065217 | 0.812758 | 3.61E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene065217 | 0.855425 | 6.36E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065217.t1 | MTR_0591s0010 | 90.179 | 336 | 33 | 0 | 1 | 336 | 42 | 377 | 0.0 | 639 |
| MS.gene065217.t1 | MTR_8g068750 | 87.500 | 336 | 42 | 0 | 1 | 336 | 42 | 377 | 0.0 | 624 |
| MS.gene065217.t1 | MTR_8g068690 | 86.310 | 336 | 46 | 0 | 1 | 336 | 41 | 376 | 0.0 | 605 |
| MS.gene065217.t1 | MTR_8g068870 | 79.762 | 336 | 68 | 0 | 1 | 336 | 28 | 363 | 0.0 | 573 |
| MS.gene065217.t1 | MTR_7g118320 | 75.893 | 336 | 81 | 0 | 1 | 336 | 27 | 362 | 0.0 | 540 |
| MS.gene065217.t1 | MTR_8g068730 | 76.488 | 336 | 47 | 1 | 1 | 336 | 42 | 345 | 0.0 | 527 |
| MS.gene065217.t1 | MTR_8g068570 | 81.908 | 304 | 28 | 1 | 1 | 304 | 42 | 318 | 0.0 | 506 |
| MS.gene065217.t1 | MTR_6g078850 | 70.920 | 337 | 96 | 2 | 1 | 335 | 46 | 382 | 2.41e-173 | 491 |
| MS.gene065217.t1 | MTR_8g068690 | 86.722 | 241 | 32 | 0 | 1 | 241 | 41 | 281 | 4.20e-155 | 436 |
| MS.gene065217.t1 | MTR_7g118300 | 61.310 | 336 | 127 | 1 | 1 | 336 | 43 | 375 | 3.10e-153 | 435 |
| MS.gene065217.t1 | MTR_8g068600 | 84.298 | 242 | 35 | 1 | 9 | 250 | 24 | 262 | 9.25e-150 | 422 |
| MS.gene065217.t1 | MTR_8g068740 | 76.190 | 252 | 28 | 1 | 1 | 252 | 42 | 261 | 1.41e-136 | 389 |
| MS.gene065217.t1 | MTR_3g092900 | 52.537 | 335 | 157 | 1 | 2 | 336 | 31 | 363 | 1.23e-131 | 380 |
| MS.gene065217.t1 | MTR_8g024160 | 53.274 | 336 | 114 | 1 | 1 | 336 | 36 | 328 | 4.89e-128 | 369 |
| MS.gene065217.t1 | MTR_5g098170 | 51.796 | 334 | 158 | 2 | 4 | 336 | 32 | 363 | 2.23e-125 | 364 |
| MS.gene065217.t1 | MTR_1g036490 | 41.520 | 342 | 189 | 6 | 2 | 336 | 33 | 370 | 4.34e-88 | 269 |
| MS.gene065217.t1 | MTR_1g036460 | 41.228 | 342 | 190 | 6 | 2 | 336 | 33 | 370 | 1.66e-87 | 268 |
| MS.gene065217.t1 | MTR_7g011990 | 39.412 | 340 | 195 | 6 | 1 | 336 | 35 | 367 | 1.68e-82 | 254 |
| MS.gene065217.t1 | MTR_7g011900 | 38.348 | 339 | 203 | 5 | 1 | 336 | 35 | 370 | 2.00e-80 | 249 |
| MS.gene065217.t1 | MTR_7g012040 | 38.824 | 340 | 199 | 5 | 1 | 336 | 34 | 368 | 8.03e-80 | 248 |
| MS.gene065217.t1 | MTR_1g036510 | 40.058 | 342 | 194 | 6 | 2 | 336 | 47 | 384 | 9.78e-80 | 248 |
| MS.gene065217.t1 | MTR_1g096310 | 39.589 | 341 | 198 | 6 | 1 | 336 | 35 | 372 | 1.01e-79 | 248 |
| MS.gene065217.t1 | MTR_3g021440 | 40.882 | 340 | 191 | 7 | 1 | 336 | 37 | 370 | 1.56e-79 | 247 |
| MS.gene065217.t1 | MTR_7g012020 | 38.710 | 341 | 199 | 6 | 1 | 336 | 34 | 369 | 2.68e-79 | 246 |
| MS.gene065217.t1 | MTR_2g055940 | 38.209 | 335 | 199 | 6 | 1 | 333 | 29 | 357 | 9.67e-79 | 245 |
| MS.gene065217.t1 | MTR_3g021430 | 40.118 | 339 | 195 | 6 | 1 | 336 | 24 | 357 | 1.11e-78 | 244 |
| MS.gene065217.t1 | MTR_7g012090 | 40.922 | 347 | 188 | 9 | 1 | 336 | 35 | 375 | 2.26e-78 | 244 |
| MS.gene065217.t1 | MTR_7g012070 | 40.922 | 347 | 188 | 9 | 1 | 336 | 35 | 375 | 2.95e-77 | 241 |
| MS.gene065217.t1 | MTR_8g068620 | 87.611 | 113 | 14 | 0 | 129 | 241 | 1 | 113 | 4.03e-68 | 209 |
| MS.gene065217.t1 | MTR_8g068590 | 88.596 | 114 | 13 | 0 | 1 | 114 | 21 | 134 | 1.25e-67 | 209 |
| MS.gene065217.t1 | MTR_2g072790 | 33.851 | 322 | 203 | 4 | 3 | 321 | 25 | 339 | 5.13e-65 | 209 |
| MS.gene065217.t1 | MTR_3g096050 | 34.795 | 342 | 208 | 7 | 1 | 336 | 26 | 358 | 6.21e-64 | 206 |
| MS.gene065217.t1 | MTR_8g068760 | 84.348 | 115 | 18 | 0 | 1 | 115 | 29 | 143 | 6.43e-62 | 197 |
| MS.gene065217.t1 | MTR_8g068760 | 82.828 | 99 | 17 | 0 | 238 | 336 | 135 | 233 | 3.70e-57 | 185 |
| MS.gene065217.t1 | MTR_0079s0070 | 36.392 | 316 | 186 | 7 | 7 | 317 | 10 | 315 | 5.78e-61 | 198 |
| MS.gene065217.t1 | MTR_4g038440 | 36.392 | 316 | 186 | 7 | 7 | 317 | 44 | 349 | 1.15e-60 | 198 |
| MS.gene065217.t1 | MTR_0017s0100 | 34.783 | 322 | 187 | 9 | 5 | 317 | 42 | 349 | 5.38e-58 | 191 |
| MS.gene065217.t1 | MTR_3g083620 | 36.050 | 319 | 180 | 9 | 10 | 320 | 43 | 345 | 2.88e-56 | 187 |
| MS.gene065217.t1 | MTR_7g012020 | 38.346 | 266 | 156 | 5 | 1 | 260 | 34 | 297 | 3.30e-56 | 185 |
| MS.gene065217.t1 | MTR_8g068580 | 89.011 | 91 | 10 | 0 | 246 | 336 | 43 | 133 | 5.49e-55 | 176 |
| MS.gene065217.t1 | MTR_1g050220 | 34.483 | 319 | 156 | 7 | 2 | 317 | 16 | 284 | 9.31e-55 | 181 |
| MS.gene065217.t1 | MTR_1g036510 | 40.083 | 242 | 137 | 4 | 2 | 238 | 47 | 285 | 9.91e-54 | 178 |
| MS.gene065217.t1 | MTR_3g096070 | 33.626 | 342 | 189 | 8 | 1 | 336 | 26 | 335 | 1.57e-53 | 179 |
| MS.gene065217.t1 | MTR_5g074680 | 30.408 | 319 | 207 | 9 | 5 | 317 | 32 | 341 | 1.81e-44 | 156 |
| MS.gene065217.t1 | MTR_7g012020 | 37.838 | 222 | 132 | 4 | 1 | 219 | 34 | 252 | 2.95e-44 | 152 |
| MS.gene065217.t1 | MTR_5g074600 | 29.467 | 319 | 212 | 6 | 5 | 318 | 31 | 341 | 3.77e-43 | 152 |
| MS.gene065217.t1 | MTR_3g096050 | 34.583 | 240 | 149 | 4 | 1 | 238 | 26 | 259 | 1.32e-42 | 148 |
| MS.gene065217.t1 | MTR_1g036510 | 37.557 | 221 | 130 | 4 | 2 | 217 | 47 | 264 | 5.03e-42 | 147 |
| MS.gene065217.t1 | MTR_5g074580 | 29.697 | 330 | 195 | 6 | 5 | 317 | 32 | 341 | 2.35e-41 | 148 |
| MS.gene065217.t1 | MTR_5g074540 | 29.503 | 322 | 188 | 6 | 5 | 317 | 31 | 322 | 1.41e-40 | 145 |
| MS.gene065217.t1 | MTR_4g079160 | 29.825 | 342 | 184 | 8 | 5 | 321 | 30 | 340 | 2.45e-38 | 140 |
| MS.gene065217.t1 | MTR_4g038440 | 34.167 | 240 | 137 | 6 | 7 | 238 | 44 | 270 | 1.26e-37 | 135 |
| MS.gene065217.t1 | MTR_7g014570 | 27.673 | 318 | 212 | 6 | 5 | 318 | 31 | 334 | 1.40e-37 | 137 |
| MS.gene065217.t1 | MTR_1g076940 | 26.791 | 321 | 220 | 9 | 5 | 318 | 31 | 343 | 2.68e-36 | 134 |
| MS.gene065217.t1 | MTR_4g088340 | 30.312 | 320 | 207 | 9 | 4 | 318 | 7 | 315 | 3.19e-36 | 134 |
| MS.gene065217.t1 | MTR_4g088200 | 30.723 | 332 | 207 | 10 | 1 | 321 | 27 | 346 | 5.37e-36 | 134 |
| MS.gene065217.t1 | MTR_7g024500 | 26.168 | 321 | 220 | 6 | 4 | 321 | 29 | 335 | 2.30e-35 | 132 |
| MS.gene065217.t1 | MTR_4g088345 | 29.102 | 323 | 213 | 9 | 4 | 321 | 30 | 341 | 7.82e-35 | 130 |
| MS.gene065217.t1 | MTR_7g024520 | 26.994 | 326 | 211 | 7 | 4 | 321 | 29 | 335 | 8.57e-35 | 130 |
| MS.gene065217.t1 | MTR_7g014510 | 26.562 | 320 | 218 | 7 | 5 | 318 | 31 | 339 | 1.45e-34 | 130 |
| MS.gene065217.t1 | MTR_4g033150 | 31.879 | 298 | 191 | 8 | 5 | 295 | 31 | 323 | 4.02e-34 | 129 |
| MS.gene065217.t1 | MTR_4g033015 | 30.872 | 298 | 194 | 7 | 5 | 295 | 31 | 323 | 1.61e-33 | 127 |
| MS.gene065217.t1 | MTR_5g074610 | 41.060 | 151 | 85 | 2 | 171 | 318 | 159 | 308 | 4.49e-33 | 125 |
| MS.gene065217.t1 | MTR_4g033200 | 30.537 | 298 | 195 | 7 | 5 | 295 | 31 | 323 | 1.04e-32 | 125 |
| MS.gene065217.t1 | MTR_4g088190 | 30.488 | 328 | 216 | 7 | 1 | 321 | 27 | 349 | 1.33e-31 | 122 |
| MS.gene065217.t1 | MTR_4g033170 | 30.000 | 260 | 167 | 6 | 5 | 260 | 31 | 279 | 1.57e-28 | 113 |
| MS.gene065217.t1 | MTR_4g033085 | 29.344 | 259 | 168 | 6 | 5 | 259 | 31 | 278 | 4.61e-26 | 107 |
| MS.gene065217.t1 | MTR_1g076930 | 24.686 | 239 | 168 | 7 | 4 | 238 | 7 | 237 | 1.61e-18 | 84.0 |
| MS.gene065217.t1 | MTR_7g118310 | 44.554 | 101 | 40 | 3 | 134 | 218 | 2 | 102 | 8.27e-18 | 78.6 |
| MS.gene065217.t1 | MTR_6g060280 | 50.000 | 54 | 22 | 1 | 190 | 238 | 1 | 54 | 3.88e-13 | 64.3 |
| MS.gene065217.t1 | MTR_4g025570 | 38.835 | 103 | 57 | 3 | 228 | 329 | 110 | 207 | 1.06e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065217.t1 | AT5G54160 | 49.258 | 337 | 163 | 3 | 2 | 336 | 31 | 361 | 3.70e-121 | 353 |
| MS.gene065217.t1 | AT1G77520 | 45.614 | 342 | 180 | 4 | 1 | 336 | 40 | 381 | 1.25e-103 | 309 |
| MS.gene065217.t1 | AT5G53810 | 45.000 | 340 | 180 | 5 | 4 | 336 | 39 | 378 | 5.58e-91 | 277 |
| MS.gene065217.t1 | AT1G51990 | 40.476 | 336 | 195 | 4 | 3 | 335 | 28 | 361 | 5.84e-90 | 274 |
| MS.gene065217.t1 | AT1G51990 | 39.881 | 336 | 197 | 4 | 3 | 335 | 28 | 361 | 3.85e-89 | 271 |
| MS.gene065217.t1 | AT1G33030 | 41.593 | 339 | 188 | 5 | 2 | 336 | 18 | 350 | 6.82e-89 | 270 |
| MS.gene065217.t1 | AT1G77530 | 43.860 | 342 | 186 | 4 | 1 | 336 | 40 | 381 | 2.13e-87 | 268 |
| MS.gene065217.t1 | AT1G21130 | 45.614 | 342 | 172 | 7 | 3 | 336 | 38 | 373 | 6.99e-87 | 266 |
| MS.gene065217.t1 | AT1G21110 | 44.737 | 342 | 175 | 7 | 3 | 336 | 38 | 373 | 2.82e-86 | 265 |
| MS.gene065217.t1 | AT1G21100 | 45.906 | 342 | 171 | 7 | 3 | 336 | 38 | 373 | 3.25e-86 | 265 |
| MS.gene065217.t1 | AT1G21120 | 45.029 | 342 | 174 | 7 | 3 | 336 | 38 | 373 | 4.45e-86 | 264 |
| MS.gene065217.t1 | AT1G63140 | 43.860 | 342 | 186 | 4 | 1 | 336 | 40 | 381 | 7.18e-86 | 264 |
| MS.gene065217.t1 | AT1G63140 | 43.860 | 342 | 186 | 4 | 1 | 336 | 60 | 401 | 8.33e-86 | 264 |
| MS.gene065217.t1 | AT1G21120 | 44.898 | 343 | 175 | 7 | 2 | 336 | 85 | 421 | 3.73e-85 | 263 |
| MS.gene065217.t1 | AT1G76790 | 43.804 | 347 | 173 | 7 | 3 | 336 | 28 | 365 | 6.03e-83 | 256 |
| MS.gene065217.t1 | AT3G53140 | 34.018 | 341 | 212 | 5 | 3 | 336 | 25 | 359 | 9.73e-66 | 211 |
| MS.gene065217.t1 | AT5G37170 | 38.730 | 315 | 157 | 6 | 28 | 336 | 50 | 334 | 2.01e-63 | 204 |
| MS.gene065217.t1 | AT1G63140 | 45.679 | 243 | 127 | 3 | 1 | 238 | 60 | 302 | 2.21e-58 | 191 |
| MS.gene065217.t1 | AT5G37170 | 43.668 | 229 | 125 | 3 | 110 | 336 | 8 | 234 | 3.33e-57 | 185 |
| MS.gene065217.t1 | AT1G62900 | 47.525 | 202 | 105 | 1 | 136 | 336 | 4 | 205 | 7.95e-56 | 181 |
| MS.gene065217.t1 | AT1G33030 | 41.079 | 241 | 132 | 5 | 2 | 238 | 18 | 252 | 1.78e-54 | 179 |
| MS.gene065217.t1 | AT1G33030 | 41.079 | 241 | 132 | 5 | 2 | 238 | 18 | 252 | 2.39e-54 | 179 |
| MS.gene065217.t1 | AT1G21130 | 46.502 | 243 | 117 | 6 | 3 | 238 | 38 | 274 | 9.07e-54 | 178 |
| MS.gene065217.t1 | AT5G37170 | 46.774 | 186 | 97 | 2 | 153 | 336 | 1 | 186 | 1.81e-52 | 171 |
| MS.gene065217.t1 | AT1G63140 | 42.358 | 229 | 127 | 3 | 1 | 224 | 60 | 288 | 6.91e-46 | 158 |
| MS.gene065217.t1 | AT1G77530 | 41.964 | 224 | 125 | 3 | 1 | 219 | 40 | 263 | 1.03e-43 | 152 |
| MS.gene065217.t1 | AT4G35150 | 39.234 | 209 | 114 | 5 | 130 | 329 | 109 | 313 | 1.55e-41 | 147 |
| MS.gene065217.t1 | AT4G35160 | 33.131 | 329 | 194 | 10 | 10 | 323 | 49 | 366 | 1.73e-41 | 149 |
Find 75 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAATGCGATCCAACATTT+TGG | 0.214953 | 8.1:-36403859 | None:intergenic |
| AAATTGATACCATGTATATT+AGG | 0.226988 | 8.1:-36404939 | None:intergenic |
| GTTGATGTTGGAGGTGGTCT+TGG | 0.257315 | 8.1:+36404885 | MS.gene065217:CDS |
| AATTCTGATGGTGTTTCATT+AGG | 0.271958 | 8.1:+36403996 | MS.gene065217:CDS |
| TTCCTTTGATTATCCAAGTT+TGG | 0.275601 | 8.1:+36404755 | MS.gene065217:CDS |
| AATGAAACACCATCAGAATT+AGG | 0.300158 | 8.1:-36403993 | None:intergenic |
| TACCAAAATAGTTATGAAAA+AGG | 0.300886 | 8.1:+36404821 | MS.gene065217:CDS |
| AATGTTGTGTTCGTAACTTT+TGG | 0.315315 | 8.1:+36406483 | MS.gene065217:CDS |
| TAAGCAAGAATTGACTGATT+TGG | 0.322240 | 8.1:+36406427 | MS.gene065217:CDS |
| TTGATGTTGGAGGTGGTCTT+GGG | 0.328704 | 8.1:+36404886 | MS.gene065217:CDS |
| ATAACGATGGCATCTCCTTT+AGG | 0.337830 | 8.1:-36405250 | None:intergenic |
| ATGGTTTCAAGGACATAAAA+AGG | 0.340214 | 8.1:+36404859 | MS.gene065217:CDS |
| ACAATCACCTTCCCATCATT+AGG | 0.341604 | 8.1:-36406296 | None:intergenic |
| AACACAACATTCATATCTTA+TGG | 0.345755 | 8.1:-36406471 | None:intergenic |
| ATTTCATAGACTTTATAGTA+TGG | 0.351593 | 8.1:+36403947 | MS.gene065217:CDS |
| AATTGATACCATGTATATTA+GGG | 0.372137 | 8.1:-36404938 | None:intergenic |
| TATAGTGGATACTCCATGAT+TGG | 0.385965 | 8.1:+36406225 | MS.gene065217:intron |
| CAATCACCTTCCCATCATTA+GGG | 0.395348 | 8.1:-36406295 | None:intergenic |
| TTGAACCTTGAGTCCAAACT+TGG | 0.414793 | 8.1:-36404768 | None:intergenic |
| TGAGAGCTACAATGGTTTCA+AGG | 0.426722 | 8.1:+36404848 | MS.gene065217:CDS |
| TGTTTCATTAGGACCCTTGT+TGG | 0.426965 | 8.1:+36404007 | MS.gene065217:CDS |
| ACATGATGTGTTAAAGTGTT+TGG | 0.427981 | 8.1:+36403896 | MS.gene065217:CDS |
| CAACATGCCCCTTCGTATCC+TGG | 0.434446 | 8.1:+36404981 | MS.gene065217:CDS |
| GTCCCATTCATCATGGTTCA+TGG | 0.438086 | 8.1:+36404726 | MS.gene065217:CDS |
| TTCAAAGTCTACTGCCCAAT+TGG | 0.439734 | 8.1:+36406361 | MS.gene065217:CDS |
| TCATCATCAGAACATCCAAT+TGG | 0.442843 | 8.1:-36406376 | None:intergenic |
| TAGCTAAGAAAACATTATCT+TGG | 0.443131 | 8.1:-36404037 | None:intergenic |
| ATTCCCATTGTGCCTGAGAA+TGG | 0.452841 | 8.1:+36406332 | MS.gene065217:CDS |
| ATAGTATGGCTCCTGTTGCT+AGG | 0.454943 | 8.1:+36403961 | MS.gene065217:CDS |
| TCATCGCTGTATTGAAAACT+TGG | 0.465832 | 8.1:-36404791 | None:intergenic |
| CTCCATTCCGCAACTGAGCT+TGG | 0.475965 | 8.1:+36403744 | MS.gene065217:CDS |
| TAACCATTCTCAGGCACAAT+GGG | 0.484557 | 8.1:-36406335 | None:intergenic |
| ATTATCCAAGTTTGGACTCA+AGG | 0.484826 | 8.1:+36404763 | MS.gene065217:CDS |
| ACTGATTTGGCAACTAGAGT+TGG | 0.496825 | 8.1:+36406440 | MS.gene065217:CDS |
| GTTCAAGATGAACAAAAGCT+TGG | 0.507818 | 8.1:+36403921 | MS.gene065217:CDS |
| GTTGCGGAATGGAGTGTCAT+TGG | 0.508018 | 8.1:-36403735 | None:intergenic |
| TCGAATTGCATTCTTAAGCT+CGG | 0.511214 | 8.1:-36404694 | None:intergenic |
| TCTTGATGCTCCCAAAATGT+TGG | 0.521058 | 8.1:+36403848 | MS.gene065217:CDS |
| TGCCATGAACCATGATGAAT+GGG | 0.522273 | 8.1:-36404728 | None:intergenic |
| TTTGAAGCATAACCATTCTC+AGG | 0.523072 | 8.1:-36406344 | None:intergenic |
| AGGAGATGCCATCGTTATGA+AGG | 0.526020 | 8.1:+36405255 | MS.gene065217:CDS |
| AGTGCTCATCACTCCAATCA+TGG | 0.526424 | 8.1:-36406238 | None:intergenic |
| CATCATCAGAACATCCAATT+GGG | 0.528032 | 8.1:-36406375 | None:intergenic |
| TCTTGGGGTTAACATTCACT+TGG | 0.529999 | 8.1:+36404902 | MS.gene065217:CDS |
| TATGATGCTATCCCTAATGA+TGG | 0.537285 | 8.1:+36406284 | MS.gene065217:CDS |
| TGATGTTGGAGGTGGTCTTG+GGG | 0.537441 | 8.1:+36404887 | MS.gene065217:CDS |
| AAGGTTCTTGAGAGCTACAA+TGG | 0.544476 | 8.1:+36404840 | MS.gene065217:CDS |
| TACCAAGCTCAGTTGCGGAA+TGG | 0.556691 | 8.1:-36403746 | None:intergenic |
| GTGCCATGAACCATGATGAA+TGG | 0.560844 | 8.1:-36404729 | None:intergenic |
| TGATGTGTTAAAGTGTTTGG+TGG | 0.561317 | 8.1:+36403899 | MS.gene065217:CDS |
| GTCCAAACTTGGATAATCAA+AGG | 0.568114 | 8.1:-36404757 | None:intergenic |
| TTAAGAATGCAATTCGAGAA+GGG | 0.576421 | 8.1:+36404700 | MS.gene065217:CDS |
| TCAAAATACCCTAATATACA+TGG | 0.577351 | 8.1:+36404930 | MS.gene065217:CDS |
| CTTAAGAATGCAATTCGAGA+AGG | 0.581447 | 8.1:+36404699 | MS.gene065217:CDS |
| AAAAGGCTTGTTGATGTTGG+AGG | 0.582099 | 8.1:+36404876 | MS.gene065217:CDS |
| AAATATACCAAGCTCAGTTG+CGG | 0.600833 | 8.1:-36403751 | None:intergenic |
| ATGTTTGAAAGTGTGCCTAA+AGG | 0.601540 | 8.1:+36405235 | MS.gene065217:CDS |
| GCAGGAGTCGAACACCTTGG+CGG | 0.601633 | 8.1:+36405208 | MS.gene065217:intron |
| AGGCTTGTTGATGTTGGAGG+TGG | 0.616259 | 8.1:+36404879 | MS.gene065217:CDS |
| TGATCATACCAGGATACGAA+GGG | 0.620355 | 8.1:-36404989 | None:intergenic |
| TGCTATCCCTAATGATGGGA+AGG | 0.621951 | 8.1:+36406289 | MS.gene065217:CDS |
| ATAACCATTCTCAGGCACAA+TGG | 0.623336 | 8.1:-36406336 | None:intergenic |
| TAAGAATGCAATTCGAGAAG+GGG | 0.624693 | 8.1:+36404701 | MS.gene065217:CDS |
| TTCACTCACCTTCATAACGA+TGG | 0.631932 | 8.1:-36405263 | None:intergenic |
| ATCTTGGATCAAAGCCAACA+AGG | 0.639631 | 8.1:-36404021 | None:intergenic |
| TTGGCAGGAGTCGAACACCT+TGG | 0.648038 | 8.1:+36405205 | MS.gene065217:intron |
| TCTTGGATCAAAGCCAACAA+GGG | 0.658139 | 8.1:-36404020 | None:intergenic |
| AAGAATGCAATTCGAGAAGG+GGG | 0.661623 | 8.1:+36404702 | MS.gene065217:CDS |
| ATGATCATACCAGGATACGA+AGG | 0.663878 | 8.1:-36404990 | None:intergenic |
| TTTCAAACATATCTCCGCCA+AGG | 0.668102 | 8.1:-36405222 | None:intergenic |
| ATGATGCTATCCCTAATGAT+GGG | 0.676199 | 8.1:+36406285 | MS.gene065217:CDS |
| GGGGCATGTTGAATGACATG+AGG | 0.679220 | 8.1:-36404969 | None:intergenic |
| ATGATGACTCAAAGCCCAAG+AGG | 0.681471 | 8.1:+36406392 | MS.gene065217:CDS |
| ACACTTTAACACATCATGTG+AGG | 0.689210 | 8.1:-36403892 | None:intergenic |
| GATCATACCAGGATACGAAG+GGG | 0.731305 | 8.1:-36404988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAATATTTAAAAA+AGG | - | chr8.1:36404085-36404104 | None:intergenic | 0.0% |
| !! | AATAATTAGAATTTATGTAT+AGG | + | chr8.1:36405698-36405717 | MS.gene065217:intron | 10.0% |
| !!! | TTTATATATACTTTGAATTT+TGG | + | chr8.1:36406065-36406084 | MS.gene065217:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr8.1:36405434-36405453 | MS.gene065217:intron | 100.0% |
| !! | ATAATATTTAAAAAAGGAGA+AGG | - | chr8.1:36404079-36404098 | None:intergenic | 15.0% |
| !! | GCAAATACTAATTTATATTA+CGG | - | chr8.1:36404351-36404370 | None:intergenic | 15.0% |
| !! | TATAACTACTAATTAGATAT+AGG | - | chr8.1:36406111-36406130 | None:intergenic | 15.0% |
| !! | TGAATAAAATATATATCATC+AGG | + | chr8.1:36404186-36404205 | MS.gene065217:intron | 15.0% |
| !!! | ACAAATATGTAAATTTTCAA+AGG | - | chr8.1:36405639-36405658 | None:intergenic | 15.0% |
| !!! | TATTTTATAAACTATTACCA+AGG | - | chr8.1:36404538-36404557 | None:intergenic | 15.0% |
| !! | AAATCCATATGAATAATTTG+GGG | + | chr8.1:36405415-36405434 | MS.gene065217:intron | 20.0% |
| !! | AAATTGATACCATGTATATT+AGG | - | chr8.1:36404942-36404961 | None:intergenic | 20.0% |
| !! | AATTGATACCATGTATATTA+GGG | - | chr8.1:36404941-36404960 | None:intergenic | 20.0% |
| !! | ACAAATCCATATGAATAATT+TGG | + | chr8.1:36405413-36405432 | MS.gene065217:intron | 20.0% |
| !! | AGACTCGTAAAAAAAAAAAA+AGG | + | chr8.1:36405967-36405986 | MS.gene065217:intron | 20.0% |
| !! | ATTTCATAGACTTTATAGTA+TGG | + | chr8.1:36403947-36403966 | MS.gene065217:CDS | 20.0% |
| !! | CAAATCCATATGAATAATTT+GGG | + | chr8.1:36405414-36405433 | MS.gene065217:intron | 20.0% |
| !! | CTTATTCAATCAAATTGAAT+GGG | + | chr8.1:36405337-36405356 | MS.gene065217:intron | 20.0% |
| !! | GAACTAAAATATCTTTATTG+TGG | + | chr8.1:36405570-36405589 | MS.gene065217:intron | 20.0% |
| !! | GACTCGTAAAAAAAAAAAAA+GGG | + | chr8.1:36405968-36405987 | MS.gene065217:intron | 20.0% |
| !! | TACCAAAATAGTTATGAAAA+AGG | + | chr8.1:36404821-36404840 | MS.gene065217:CDS | 20.0% |
| !! | TATGTTAGTTCAATTGATAT+TGG | + | chr8.1:36404124-36404143 | MS.gene065217:intron | 20.0% |
| !! | TCTTATTCAATCAAATTGAA+TGG | + | chr8.1:36405336-36405355 | MS.gene065217:intron | 20.0% |
| !! | TTATTCAATCAAATTGAATG+GGG | + | chr8.1:36405338-36405357 | MS.gene065217:intron | 20.0% |
| !! | TTGCATATAAAAAAGTAATG+CGG | + | chr8.1:36405080-36405099 | MS.gene065217:intron | 20.0% |
| !! | TTTAGTCAACAAATATAGAT+TGG | - | chr8.1:36406202-36406221 | None:intergenic | 20.0% |
| !!! | AACCTTTTTCATAACTATTT+TGG | - | chr8.1:36404826-36404845 | None:intergenic | 20.0% |
| !!! | AGAAAGCAACAATTTTTAAA+TGG | + | chr8.1:36405938-36405957 | MS.gene065217:intron | 20.0% |
| !!! | CCAGTCTTTTTTTTAAAAAT+AGG | + | chr8.1:36405508-36405527 | MS.gene065217:intron | 20.0% |
| !!! | CCTATTTTTAAAAAAAAGAC+TGG | - | chr8.1:36405511-36405530 | None:intergenic | 20.0% |
| !!! | GAAAAACTAAAAGTGATTTT+TGG | + | chr8.1:36405761-36405780 | MS.gene065217:intron | 20.0% |
| !!! | GAAAGCAACAATTTTTAAAT+GGG | + | chr8.1:36405939-36405958 | MS.gene065217:intron | 20.0% |
| !!! | TAAATATGAATTGTTGTTCT+TGG | + | chr8.1:36405288-36405307 | MS.gene065217:intron | 20.0% |
| !!! | TATAAAGAGAGATCAAATTT+TGG | - | chr8.1:36406051-36406070 | None:intergenic | 20.0% |
| !!! | TTGTTGACTAAATTTTATAG+TGG | + | chr8.1:36406210-36406229 | MS.gene065217:intron | 20.0% |
| !!! | TTTTTTAAAAATAGGACACT+TGG | + | chr8.1:36405516-36405535 | MS.gene065217:intron | 20.0% |
| ! | AAAAAATCATGTTGCAATGT+TGG | - | chr8.1:36404567-36404586 | None:intergenic | 25.0% |
| ! | AACACAACATTCATATCTTA+TGG | - | chr8.1:36406474-36406493 | None:intergenic | 25.0% |
| ! | AATCCATATGAATAATTTGG+GGG | + | chr8.1:36405416-36405435 | MS.gene065217:intron | 25.0% |
| ! | ATCCTAATAAATGAAGAAAC+TGG | - | chr8.1:36404634-36404653 | None:intergenic | 25.0% |
| ! | ATGTTCAATTAAGAGAATTG+AGG | + | chr8.1:36404371-36404390 | MS.gene065217:intron | 25.0% |
| ! | CTATATCGAATGAAACTTTA+GGG | + | chr8.1:36405124-36405143 | MS.gene065217:intron | 25.0% |
| ! | GATTAATGACTAGTATCTAT+TGG | - | chr8.1:36404242-36404261 | None:intergenic | 25.0% |
| ! | TAGCTAAGAAAACATTATCT+TGG | - | chr8.1:36404040-36404059 | None:intergenic | 25.0% |
| ! | TCAAAATACCCTAATATACA+TGG | + | chr8.1:36404930-36404949 | MS.gene065217:CDS | 25.0% |
| ! | TTGAAGTGATATATCAAGTT+TGG | + | chr8.1:36404158-36404177 | MS.gene065217:intron | 25.0% |
| !! | CTAATTGTTTCTTCATTCTT+AGG | + | chr8.1:36404670-36404689 | MS.gene065217:intron | 25.0% |
| !!! | AACATTTTAATGATCATACC+AGG | - | chr8.1:36405002-36405021 | None:intergenic | 25.0% |
| !!! | AATTAGCGATTTTTTCCTTT+TGG | - | chr8.1:36405160-36405179 | None:intergenic | 25.0% |
| !!! | TGATGTATTGTTTTCTAAAG+TGG | + | chr8.1:36404492-36404511 | MS.gene065217:intron | 25.0% |
| !!! | TTTTCTAAAGTGGATTCAAT+TGG | + | chr8.1:36404502-36404521 | MS.gene065217:intron | 25.0% |
| AAGTTAAATTTCCGACTATC+AGG | - | chr8.1:36404472-36404491 | None:intergenic | 30.0% | |
| AATGAAACACCATCAGAATT+AGG | - | chr8.1:36403996-36404015 | None:intergenic | 30.0% | |
| ACATTAGCTAAAATATCGTG+TGG | + | chr8.1:36404307-36404326 | MS.gene065217:intron | 30.0% | |
| AGCCAGTTTCTTCATTTATT+AGG | + | chr8.1:36404629-36404648 | MS.gene065217:intron | 30.0% | |
| AGTTAAATTTCCGACTATCA+GGG | - | chr8.1:36404471-36404490 | None:intergenic | 30.0% | |
| ATAACTAACAATCACTCGAT+CGG | - | chr8.1:36404264-36404283 | None:intergenic | 30.0% | |
| ATCCATATGAATAATTTGGG+GGG | + | chr8.1:36405417-36405436 | MS.gene065217:intron | 30.0% | |
| ATGGTTTCAAGGACATAAAA+AGG | + | chr8.1:36404859-36404878 | MS.gene065217:CDS | 30.0% | |
| CATATAAAAAAGTAATGCGG+TGG | + | chr8.1:36405083-36405102 | MS.gene065217:intron | 30.0% | |
| GCTATATCGAATGAAACTTT+AGG | + | chr8.1:36405123-36405142 | MS.gene065217:intron | 30.0% | |
| TAAGCAAGAATTGACTGATT+TGG | + | chr8.1:36406427-36406446 | MS.gene065217:CDS | 30.0% | |
| TTAAGAATGCAATTCGAGAA+GGG | + | chr8.1:36404700-36404719 | MS.gene065217:CDS | 30.0% | |
| TTCCTTTGATTATCCAAGTT+TGG | + | chr8.1:36404755-36404774 | MS.gene065217:CDS | 30.0% | |
| TTGATTGAATAAGATGAGAG+TGG | - | chr8.1:36405330-36405349 | None:intergenic | 30.0% | |
| ! | AATGTTGTGTTCGTAACTTT+TGG | + | chr8.1:36406483-36406502 | MS.gene065217:CDS | 30.0% |
| ! | AATTCTGATGGTGTTTCATT+AGG | + | chr8.1:36403996-36404015 | MS.gene065217:CDS | 30.0% |
| ! | ACATGATGTGTTAAAGTGTT+TGG | + | chr8.1:36403896-36403915 | MS.gene065217:CDS | 30.0% |
| ! | AGTTCAATGGTTTTCTATCA+AGG | + | chr8.1:36404414-36404433 | MS.gene065217:intron | 30.0% |
| ! | ATAATGTTTTCTTAGCTAGC+TGG | + | chr8.1:36404042-36404061 | MS.gene065217:CDS | 30.0% |
| ! | ATGTTGTGTTCGTAACTTTT+GGG | + | chr8.1:36406484-36406503 | MS.gene065217:CDS | 30.0% |
| ! | GTTTTGTAACACATGAATAC+TGG | - | chr8.1:36406029-36406048 | None:intergenic | 30.0% |
| !! | AACACTAACTACCATTTTTG+TGG | - | chr8.1:36405789-36405808 | None:intergenic | 30.0% |
| !! | ATAAAAAGGCTTGTTGATGT+TGG | + | chr8.1:36404873-36404892 | MS.gene065217:CDS | 30.0% |
| !! | CAATTGGATTTTTCAAACCT+TGG | + | chr8.1:36404518-36404537 | MS.gene065217:intron | 30.0% |
| !! | TGGATTTGTTAATCTAGACA+AGG | - | chr8.1:36405402-36405421 | None:intergenic | 30.0% |
| !!! | TTTTTTGCTCCTAATTCTGA+TGG | + | chr8.1:36403984-36404003 | MS.gene065217:CDS | 30.0% |
| AAATATACCAAGCTCAGTTG+CGG | - | chr8.1:36403754-36403773 | None:intergenic | 35.0% | |
| AAGAGTGAACACAAGTTCAA+TGG | + | chr8.1:36404401-36404420 | MS.gene065217:intron | 35.0% | |
| ACACTTTAACACATCATGTG+AGG | - | chr8.1:36403895-36403914 | None:intergenic | 35.0% | |
| ATGATGCTATCCCTAATGAT+GGG | + | chr8.1:36406285-36406304 | MS.gene065217:CDS | 35.0% | |
| ATTATCCAAGTTTGGACTCA+AGG | + | chr8.1:36404763-36404782 | MS.gene065217:CDS | 35.0% | |
| CATCAGGAGATACTCTTTAA+AGG | + | chr8.1:36404202-36404221 | MS.gene065217:intron | 35.0% | |
| CATCATCAGAACATCCAATT+GGG | - | chr8.1:36406378-36406397 | None:intergenic | 35.0% | |
| CTTAAGAATGCAATTCGAGA+AGG | + | chr8.1:36404699-36404718 | MS.gene065217:CDS | 35.0% | |
| GTAACACATGAATACTGGAA+AGG | - | chr8.1:36406024-36406043 | None:intergenic | 35.0% | |
| GTCCAAACTTGGATAATCAA+AGG | - | chr8.1:36404760-36404779 | None:intergenic | 35.0% | |
| GTTCAAGATGAACAAAAGCT+TGG | + | chr8.1:36403921-36403940 | MS.gene065217:CDS | 35.0% | |
| TAAGAATGCAATTCGAGAAG+GGG | + | chr8.1:36404701-36404720 | MS.gene065217:CDS | 35.0% | |
| TATGATGCTATCCCTAATGA+TGG | + | chr8.1:36406284-36406303 | MS.gene065217:CDS | 35.0% | |
| TCATCATCAGAACATCCAAT+TGG | - | chr8.1:36406379-36406398 | None:intergenic | 35.0% | |
| TCATCGCTGTATTGAAAACT+TGG | - | chr8.1:36404794-36404813 | None:intergenic | 35.0% | |
| TCCATATGAATAATTTGGGG+GGG | + | chr8.1:36405418-36405437 | MS.gene065217:intron | 35.0% | |
| TCGAATTGCATTCTTAAGCT+CGG | - | chr8.1:36404697-36404716 | None:intergenic | 35.0% | |
| TTTGATGTGTTGCAAAAAGC+TGG | + | chr8.1:36403771-36403790 | MS.gene065217:CDS | 35.0% | |
| ! | AAGAATGCGATCCAACATTT+TGG | - | chr8.1:36403862-36403881 | None:intergenic | 35.0% |
| ! | AGAATGCGATCCAACATTTT+GGG | - | chr8.1:36403861-36403880 | None:intergenic | 35.0% |
| ! | ATGTTTGAAAGTGTGCCTAA+AGG | + | chr8.1:36405235-36405254 | MS.gene065217:CDS | 35.0% |
| ! | GAGATACTCTTTAAAGGAGA+GGG | + | chr8.1:36404208-36404227 | MS.gene065217:intron | 35.0% |
| ! | TAGTTCTCTCTTTTCCTCTT+GGG | - | chr8.1:36406409-36406428 | None:intergenic | 35.0% |
| ! | TGATGTGTTAAAGTGTTTGG+TGG | + | chr8.1:36403899-36403918 | MS.gene065217:CDS | 35.0% |
| ! | TTTGAAGCATAACCATTCTC+AGG | - | chr8.1:36406347-36406366 | None:intergenic | 35.0% |
| !! | TATAGTGGATACTCCATGAT+TGG | + | chr8.1:36406225-36406244 | MS.gene065217:intron | 35.0% |
| !! | TTAGTTCTCTCTTTTCCTCT+TGG | - | chr8.1:36406410-36406429 | None:intergenic | 35.0% |
| !!! | GATTTTTGGTGCCACAAAAA+TGG | + | chr8.1:36405775-36405794 | MS.gene065217:intron | 35.0% |
| !!! | TGTTCGTAACTTTTGGGTTA+TGG | + | chr8.1:36406490-36406509 | MS.gene065217:CDS | 35.0% |
| AAGAATGCAATTCGAGAAGG+GGG | + | chr8.1:36404702-36404721 | MS.gene065217:CDS | 40.0% | |
| AAGGTTCTTGAGAGCTACAA+TGG | + | chr8.1:36404840-36404859 | MS.gene065217:CDS | 40.0% | |
| AATCTAGACAAGGTCGTATG+TGG | - | chr8.1:36405392-36405411 | None:intergenic | 40.0% | |
| ACAATCACCTTCCCATCATT+AGG | - | chr8.1:36406299-36406318 | None:intergenic | 40.0% | |
| ACTACTTGATGTTGCCATGT+TGG | + | chr8.1:36405186-36405205 | MS.gene065217:intron | 40.0% | |
| ATAACCATTCTCAGGCACAA+TGG | - | chr8.1:36406339-36406358 | None:intergenic | 40.0% | |
| ATAACGATGGCATCTCCTTT+AGG | - | chr8.1:36405253-36405272 | None:intergenic | 40.0% | |
| ATATGAATAATTTGGGGGGG+GGG | + | chr8.1:36405421-36405440 | MS.gene065217:intron | 40.0% | |
| ATCTTGGATCAAAGCCAACA+AGG | - | chr8.1:36404024-36404043 | None:intergenic | 40.0% | |
| ATGATCATACCAGGATACGA+AGG | - | chr8.1:36404993-36405012 | None:intergenic | 40.0% | |
| CAATCACCTTCCCATCATTA+GGG | - | chr8.1:36406298-36406317 | None:intergenic | 40.0% | |
| CATATGAATAATTTGGGGGG+GGG | + | chr8.1:36405420-36405439 | MS.gene065217:intron | 40.0% | |
| CCATATGAATAATTTGGGGG+GGG | + | chr8.1:36405419-36405438 | MS.gene065217:intron | 40.0% | |
| GAGATTGAAAAAGCCTCGAT+TGG | - | chr8.1:36404606-36404625 | None:intergenic | 40.0% | |
| GGATAGGTAACCATGGTAAA+CGG | - | chr8.1:36405371-36405390 | None:intergenic | 40.0% | |
| TAACCATTCTCAGGCACAAT+GGG | - | chr8.1:36406338-36406357 | None:intergenic | 40.0% | |
| TAGGGTATGAGAGTTCCAAA+AGG | + | chr8.1:36405142-36405161 | MS.gene065217:intron | 40.0% | |
| TCTTGATGCTCCCAAAATGT+TGG | + | chr8.1:36403848-36403867 | MS.gene065217:CDS | 40.0% | |
| TCTTGGATCAAAGCCAACAA+GGG | - | chr8.1:36404023-36404042 | None:intergenic | 40.0% | |
| TCTTGGGGTTAACATTCACT+TGG | + | chr8.1:36404902-36404921 | MS.gene065217:CDS | 40.0% | |
| TGAGAGCTACAATGGTTTCA+AGG | + | chr8.1:36404848-36404867 | MS.gene065217:CDS | 40.0% | |
| TGATCATACCAGGATACGAA+GGG | - | chr8.1:36404992-36405011 | None:intergenic | 40.0% | |
| TGCCATGAACCATGATGAAT+GGG | - | chr8.1:36404731-36404750 | None:intergenic | 40.0% | |
| TGTTTCATTAGGACCCTTGT+TGG | + | chr8.1:36404007-36404026 | MS.gene065217:CDS | 40.0% | |
| TTCAAAGTCTACTGCCCAAT+TGG | + | chr8.1:36406361-36406380 | MS.gene065217:CDS | 40.0% | |
| TTCACTCACCTTCATAACGA+TGG | - | chr8.1:36405266-36405285 | None:intergenic | 40.0% | |
| TTGAAAAAGCCTCGATTGGA+AGG | - | chr8.1:36404602-36404621 | None:intergenic | 40.0% | |
| TTGAACCTTGAGTCCAAACT+TGG | - | chr8.1:36404771-36404790 | None:intergenic | 40.0% | |
| TTTCAAACATATCTCCGCCA+AGG | - | chr8.1:36405225-36405244 | None:intergenic | 40.0% | |
| ! | ACACAAAGTACCCTGATAGT+CGG | + | chr8.1:36404458-36404477 | MS.gene065217:intron | 40.0% |
| ! | GGAGATACTCTTTAAAGGAG+AGG | + | chr8.1:36404207-36404226 | MS.gene065217:intron | 40.0% |
| !! | AAAAGGCTTGTTGATGTTGG+AGG | + | chr8.1:36404876-36404895 | MS.gene065217:CDS | 40.0% |
| !! | ACTGATTTGGCAACTAGAGT+TGG | + | chr8.1:36406440-36406459 | MS.gene065217:CDS | 40.0% |
| !!! | TGGGAAGGTGATTGTTTTAG+AGG | + | chr8.1:36406304-36406323 | MS.gene065217:CDS | 40.0% |
| AAAGTAGAGAGTTGCCACCA+TGG | + | chr8.1:36405461-36405480 | MS.gene065217:intron | 45.0% | |
| AGACAAGGTCGTATGTGGAT+AGG | - | chr8.1:36405387-36405406 | None:intergenic | 45.0% | |
| AGGAGATGCCATCGTTATGA+AGG | + | chr8.1:36405255-36405274 | MS.gene065217:CDS | 45.0% | |
| AGTGCTCATCACTCCAATCA+TGG | - | chr8.1:36406241-36406260 | None:intergenic | 45.0% | |
| ATAGTATGGCTCCTGTTGCT+AGG | + | chr8.1:36403961-36403980 | MS.gene065217:CDS | 45.0% | |
| ATGATGACTCAAAGCCCAAG+AGG | + | chr8.1:36406392-36406411 | MS.gene065217:CDS | 45.0% | |
| ATTCCCATTGTGCCTGAGAA+TGG | + | chr8.1:36406332-36406351 | MS.gene065217:CDS | 45.0% | |
| CCCCCCCCAAATTATTCATA+TGG | - | chr8.1:36405422-36405441 | None:intergenic | 45.0% | |
| CGTATGTGGATAGGTAACCA+TGG | - | chr8.1:36405378-36405397 | None:intergenic | 45.0% | |
| CTAGATAAGCCTTCCAATCG+AGG | + | chr8.1:36404590-36404609 | MS.gene065217:intron | 45.0% | |
| GATCATACCAGGATACGAAG+GGG | - | chr8.1:36404991-36405010 | None:intergenic | 45.0% | |
| GGAGCAAAAAACCTAGCAAC+AGG | - | chr8.1:36403975-36403994 | None:intergenic | 45.0% | |
| GGGAAAAACACCGTTTACCA+TGG | + | chr8.1:36405358-36405377 | MS.gene065217:intron | 45.0% | |
| GTCCCATTCATCATGGTTCA+TGG | + | chr8.1:36404726-36404745 | MS.gene065217:CDS | 45.0% | |
| GTGCCATGAACCATGATGAA+TGG | - | chr8.1:36404732-36404751 | None:intergenic | 45.0% | |
| TATGAATAATTTGGGGGGGG+GGG | + | chr8.1:36405422-36405441 | MS.gene065217:intron | 45.0% | |
| TGCGGTGGCAAATGATATGT+TGG | + | chr8.1:36405098-36405117 | MS.gene065217:intron | 45.0% | |
| TTGATGTTGGAGGTGGTCTT+GGG | + | chr8.1:36404886-36404905 | MS.gene065217:CDS | 45.0% | |
| ! | TGCTATCCCTAATGATGGGA+AGG | + | chr8.1:36406289-36406308 | MS.gene065217:CDS | 45.0% |
| ATGAATAATTTGGGGGGGGG+GGG | + | chr8.1:36405423-36405442 | MS.gene065217:intron | 50.0% | |
| CCATGGTCGTCTCATGAAGA+CGG | + | chr8.1:36405478-36405497 | MS.gene065217:intron | 50.0% | |
| CTTGATGTTGCCATGTTGGC+AGG | + | chr8.1:36405190-36405209 | MS.gene065217:intron | 50.0% | |
| GGGGCATGTTGAATGACATG+AGG | - | chr8.1:36404972-36404991 | None:intergenic | 50.0% | |
| GTTGATGTTGGAGGTGGTCT+TGG | + | chr8.1:36404885-36404904 | MS.gene065217:CDS | 50.0% | |
| TACCAAGCTCAGTTGCGGAA+TGG | - | chr8.1:36403749-36403768 | None:intergenic | 50.0% | |
| TCTTCATGAGACGACCATGG+TGG | - | chr8.1:36405478-36405497 | None:intergenic | 50.0% | |
| ! | GTTGCGGAATGGAGTGTCAT+TGG | - | chr8.1:36403738-36403757 | None:intergenic | 50.0% |
| ! | TGATGTTGGAGGTGGTCTTG+GGG | + | chr8.1:36404887-36404906 | MS.gene065217:CDS | 50.0% |
| !! | AGGCTTGTTGATGTTGGAGG+TGG | + | chr8.1:36404879-36404898 | MS.gene065217:CDS | 50.0% |
| CAACATGCCCCTTCGTATCC+TGG | + | chr8.1:36404981-36405000 | MS.gene065217:CDS | 55.0% | |
| CCGTCTTCATGAGACGACCA+TGG | - | chr8.1:36405481-36405500 | None:intergenic | 55.0% | |
| CTCCATTCCGCAACTGAGCT+TGG | + | chr8.1:36403744-36403763 | MS.gene065217:CDS | 55.0% | |
| GTGTTCGACTCCTGCCAACA+TGG | - | chr8.1:36405203-36405222 | None:intergenic | 55.0% | |
| TGAATAATTTGGGGGGGGGG+GGG | + | chr8.1:36405424-36405443 | MS.gene065217:intron | 55.0% | |
| TTGGCAGGAGTCGAACACCT+TGG | + | chr8.1:36405205-36405224 | MS.gene065217:intron | 55.0% | |
| !! | AGGGGGTGTCCCATTCATCA+TGG | + | chr8.1:36404719-36404738 | MS.gene065217:CDS | 55.0% |
| AATAATTTGGGGGGGGGGGG+GGG | + | chr8.1:36405426-36405445 | MS.gene065217:intron | 60.0% | |
| GAATAATTTGGGGGGGGGGG+GGG | + | chr8.1:36405425-36405444 | MS.gene065217:intron | 60.0% | |
| GCAGGAGTCGAACACCTTGG+CGG | + | chr8.1:36405208-36405227 | MS.gene065217:intron | 60.0% | |
| ATAATTTGGGGGGGGGGGGG+GGG | + | chr8.1:36405427-36405446 | MS.gene065217:intron | 65.0% | |
| TAATTTGGGGGGGGGGGGGG+GGG | + | chr8.1:36405428-36405447 | MS.gene065217:intron | 70.0% | |
| AATTTGGGGGGGGGGGGGGG+GGG | + | chr8.1:36405429-36405448 | MS.gene065217:intron | 75.0% | |
| ! | ATTTGGGGGGGGGGGGGGGG+GGG | + | chr8.1:36405430-36405449 | MS.gene065217:intron | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr8.1:36405431-36405450 | MS.gene065217:intron | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr8.1:36405432-36405451 | MS.gene065217:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr8.1:36405433-36405452 | MS.gene065217:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 36403726 | 36406526 | 36403726 | ID=MS.gene065217 |
| chr8.1 | mRNA | 36403726 | 36406526 | 36403726 | ID=MS.gene065217.t1;Parent=MS.gene065217 |
| chr8.1 | exon | 36403726 | 36404063 | 36403726 | ID=MS.gene065217.t1.exon1;Parent=MS.gene065217.t1 |
| chr8.1 | CDS | 36403726 | 36404063 | 36403726 | ID=cds.MS.gene065217.t1;Parent=MS.gene065217.t1 |
| chr8.1 | exon | 36404692 | 36405002 | 36404692 | ID=MS.gene065217.t1.exon2;Parent=MS.gene065217.t1 |
| chr8.1 | CDS | 36404692 | 36405002 | 36404692 | ID=cds.MS.gene065217.t1;Parent=MS.gene065217.t1 |
| chr8.1 | exon | 36405212 | 36405276 | 36405212 | ID=MS.gene065217.t1.exon3;Parent=MS.gene065217.t1 |
| chr8.1 | CDS | 36405212 | 36405276 | 36405212 | ID=cds.MS.gene065217.t1;Parent=MS.gene065217.t1 |
| chr8.1 | exon | 36406230 | 36406526 | 36406230 | ID=MS.gene065217.t1.exon4;Parent=MS.gene065217.t1 |
| chr8.1 | CDS | 36406230 | 36406526 | 36406230 | ID=cds.MS.gene065217.t1;Parent=MS.gene065217.t1 |
| Gene Sequence |
| Protein sequence |
