Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38579.t1 | XP_003602847.1 | 84.7 | 295 | 37 | 5 | 1 | 292 | 1 | 290 | 6.00E-127 | 463.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38579.t1 | Q08935 | 31.1 | 180 | 113 | 4 | 92 | 262 | 88 | 265 | 1.0e-18 | 95.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38579.t1 | G7J4G2 | 84.7 | 295 | 37 | 5 | 1 | 292 | 1 | 290 | 4.3e-127 | 463.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene38579 | 0.810908 | 9.12E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene38579 | 0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene049284 | MS.gene38579 | 0.815571 | 8.63E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene38579 | 0.857742 | 1.33E-62 | -1.69E-46 |
| MS.gene049427 | MS.gene38579 | 0.862661 | 4.33E-64 | -1.69E-46 |
| MS.gene049491 | MS.gene38579 | 0.835773 | 1.38E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene38579 | 0.868356 | 6.94E-66 | -1.69E-46 |
| MS.gene049661 | MS.gene38579 | 0.854096 | 1.54E-61 | -1.69E-46 |
| MS.gene049662 | MS.gene38579 | 0.851173 | 1.05E-60 | -1.69E-46 |
| MS.gene049758 | MS.gene38579 | 0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene049760 | MS.gene38579 | 0.832716 | 8.06E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene38579 | 0.800462 | 1.43E-48 | -1.69E-46 |
| MS.gene049828 | MS.gene38579 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene050076 | MS.gene38579 | 0.901274 | 3.16E-78 | -1.69E-46 |
| MS.gene050099 | MS.gene38579 | 0.807221 | 5.62E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene38579 | 0.810695 | 1.01E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene38579 | 0.859273 | 4.63E-63 | -1.69E-46 |
| MS.gene050397 | MS.gene38579 | 0.826744 | 2.29E-54 | -1.69E-46 |
| MS.gene050404 | MS.gene38579 | 0.801036 | 1.09E-48 | -1.69E-46 |
| MS.gene050432 | MS.gene38579 | 0.851536 | 8.33E-61 | -1.69E-46 |
| MS.gene050529 | MS.gene38579 | 0.825993 | 3.46E-54 | -1.69E-46 |
| MS.gene05053 | MS.gene38579 | 0.826982 | 2.01E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene38579 | 0.908058 | 2.59E-81 | -1.69E-46 |
| MS.gene050770 | MS.gene38579 | 0.910078 | 2.80E-82 | -1.69E-46 |
| MS.gene050783 | MS.gene38579 | 0.859979 | 2.84E-63 | -1.69E-46 |
| MS.gene050812 | MS.gene38579 | 0.803129 | 4.04E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene38579 | 0.839004 | 2.05E-57 | -1.69E-46 |
| MS.gene05101 | MS.gene38579 | 0.898328 | 5.91E-77 | -1.69E-46 |
| MS.gene05105 | MS.gene38579 | 0.802682 | 5.00E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene38579 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene38579 | 0.807428 | 5.08E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene38579 | 0.867781 | 1.06E-65 | -1.69E-46 |
| MS.gene051666 | MS.gene38579 | 0.834976 | 2.19E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene38579 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene38579 | 0.815915 | 7.24E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene38579 | 0.843703 | 1.19E-58 | -1.69E-46 |
| MS.gene052078 | MS.gene38579 | 0.881145 | 3.06E-70 | -1.69E-46 |
| MS.gene052271 | MS.gene38579 | 0.840126 | 1.05E-57 | -1.69E-46 |
| MS.gene052290 | MS.gene38579 | 0.893636 | 5.23E-75 | -1.69E-46 |
| MS.gene052310 | MS.gene38579 | 0.856568 | 2.95E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene38579 | 0.818738 | 1.68E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene38579 | 0.900372 | 7.83E-78 | -1.69E-46 |
| MS.gene052379 | MS.gene38579 | 0.849943 | 2.34E-60 | -1.69E-46 |
| MS.gene053009 | MS.gene38579 | 0.83187 | 1.31E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene38579 | 0.850409 | 1.73E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene38579 | 0.842973 | 1.86E-58 | -1.69E-46 |
| MS.gene053107 | MS.gene38579 | 0.825694 | 4.08E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene38579 | 0.806153 | 9.45E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene38579 | 0.906031 | 2.29E-80 | -1.69E-46 |
| MS.gene053836 | MS.gene38579 | 0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene38579 | 0.80637 | 8.50E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene38579 | 0.843281 | 1.54E-58 | -1.69E-46 |
| MS.gene054376 | MS.gene38579 | 0.907937 | 2.95E-81 | -1.69E-46 |
| MS.gene05455 | MS.gene38579 | 0.856656 | 2.78E-62 | -1.69E-46 |
| MS.gene054642 | MS.gene38579 | 0.807709 | 4.43E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene38579 | 0.937856 | 1.75E-98 | -1.69E-46 |
| MS.gene054803 | MS.gene38579 | 0.936905 | 8.21E-98 | -1.69E-46 |
| MS.gene054804 | MS.gene38579 | 0.937654 | 2.44E-98 | -1.69E-46 |
| MS.gene054955 | MS.gene38579 | 0.807756 | 4.33E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene38579 | 0.802463 | 5.54E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene38579 | 0.889031 | 3.48E-73 | -1.69E-46 |
| MS.gene055277 | MS.gene38579 | 0.876571 | 1.26E-68 | -1.69E-46 |
| MS.gene055390 | MS.gene38579 | 0.848332 | 6.56E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene38579 | 0.892947 | 9.91E-75 | -1.69E-46 |
| MS.gene055412 | MS.gene38579 | 0.823873 | 1.10E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene38579 | 0.856553 | 2.98E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene38579 | 0.851492 | 8.57E-61 | -1.69E-46 |
| MS.gene055499 | MS.gene38579 | 0.908421 | 1.74E-81 | -1.69E-46 |
| MS.gene055647 | MS.gene38579 | 0.835884 | 1.29E-56 | -1.69E-46 |
| MS.gene055896 | MS.gene38579 | 0.868102 | 8.38E-66 | -1.69E-46 |
| MS.gene05592 | MS.gene38579 | 0.832951 | 7.05E-56 | -1.69E-46 |
| MS.gene055930 | MS.gene38579 | 0.817928 | 2.56E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene38579 | 0.811954 | 5.41E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene38579 | 0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene38579 | 0.801848 | 7.42E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene38579 | 0.831245 | 1.86E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene38579 | 0.850557 | 1.57E-60 | -1.69E-46 |
| MS.gene056452 | MS.gene38579 | 0.848088 | 7.66E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene38579 | 0.835742 | 1.41E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene38579 | 0.828952 | 6.75E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene38579 | 0.808637 | 2.81E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene38579 | 0.85654 | 3.00E-62 | -1.69E-46 |
| MS.gene05702 | MS.gene38579 | 0.836193 | 1.08E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene38579 | 0.883933 | 2.95E-71 | -1.69E-46 |
| MS.gene057129 | MS.gene38579 | 0.894586 | 2.14E-75 | -1.69E-46 |
| MS.gene057146 | MS.gene38579 | 0.879183 | 1.53E-69 | -1.69E-46 |
| MS.gene057295 | MS.gene38579 | 0.864989 | 8.17E-65 | -1.69E-46 |
| MS.gene05733 | MS.gene38579 | 0.818806 | 1.62E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene38579 | 0.839922 | 1.19E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene38579 | 0.810156 | 1.33E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene38579 | 0.834946 | 2.23E-56 | -1.69E-46 |
| MS.gene058082 | MS.gene38579 | 0.811996 | 5.29E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene38579 | 0.813525 | 2.45E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene38579 | 0.84368 | 1.21E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene38579 | 0.878635 | 2.39E-69 | -1.69E-46 |
| MS.gene058323 | MS.gene38579 | 0.82003 | 8.51E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene38579 | 0.917599 | 4.36E-86 | -1.69E-46 |
| MS.gene058787 | MS.gene38579 | 0.811551 | 6.62E-51 | -1.69E-46 |
| MS.gene059029 | MS.gene38579 | 0.814645 | 1.39E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene38579 | 0.830842 | 2.34E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene38579 | 0.85454 | 1.15E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene38579 | 0.815842 | 7.52E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene38579 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene38579 | 0.883103 | 5.95E-71 | -1.69E-46 |
| MS.gene059597 | MS.gene38579 | 0.86377 | 1.96E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene38579 | 0.816952 | 4.24E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene38579 | 0.831551 | 1.57E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene38579 | 0.842742 | 2.15E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene38579 | 0.850409 | 1.73E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene38579 | 0.853095 | 3.00E-61 | -1.69E-46 |
| MS.gene059708 | MS.gene38579 | 0.812398 | 4.33E-51 | -1.69E-46 |
| MS.gene059858 | MS.gene38579 | 0.824318 | 8.61E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene38579 | 0.823887 | 1.09E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene38579 | 0.821196 | 4.59E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene38579 | 0.92575 | 1.20E-90 | -1.69E-46 |
| MS.gene060005 | MS.gene38579 | 0.805064 | 1.60E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene38579 | 0.808639 | 2.81E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene38579 | 0.821048 | 4.97E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene38579 | 0.858694 | 6.91E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene38579 | 0.833842 | 4.23E-56 | -1.69E-46 |
| MS.gene06090 | MS.gene38579 | 0.84397 | 1.01E-58 | -1.69E-46 |
| MS.gene061041 | MS.gene38579 | 0.836789 | 7.62E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene38579 | 0.830633 | 2.63E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene38579 | -0.815807 | 7.65E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene38579 | 0.910013 | 3.01E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51627 | MS.gene38579 | PPI |
| MS.gene009458 | MS.gene38579 | PPI |
| MS.gene56256 | MS.gene38579 | PPI |
| MS.gene63514 | MS.gene38579 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38579.t1 | MTR_3g099590 | 88.136 | 295 | 27 | 5 | 1 | 292 | 1 | 290 | 5.93e-180 | 497 |
| MS.gene38579.t1 | MTR_5g030020 | 34.759 | 187 | 116 | 2 | 93 | 277 | 98 | 280 | 1.37e-26 | 106 |
| MS.gene38579.t1 | MTR_4g104470 | 33.333 | 183 | 107 | 7 | 82 | 258 | 116 | 289 | 1.13e-25 | 103 |
| MS.gene38579.t1 | MTR_1g045510 | 36.872 | 179 | 100 | 7 | 91 | 263 | 113 | 284 | 2.58e-25 | 102 |
| MS.gene38579.t1 | MTR_3g075500 | 33.714 | 175 | 105 | 6 | 92 | 259 | 110 | 280 | 3.80e-24 | 99.4 |
| MS.gene38579.t1 | MTR_3g075500 | 33.333 | 165 | 99 | 6 | 92 | 249 | 110 | 270 | 2.59e-21 | 91.3 |
| MS.gene38579.t1 | MTR_7g106440 | 28.704 | 216 | 132 | 7 | 56 | 258 | 79 | 285 | 5.57e-21 | 91.3 |
| MS.gene38579.t1 | MTR_1g056520 | 29.189 | 185 | 118 | 5 | 83 | 258 | 100 | 280 | 2.21e-20 | 89.4 |
| MS.gene38579.t1 | MTR_3g027140 | 30.252 | 238 | 136 | 10 | 38 | 258 | 8 | 232 | 8.00e-18 | 80.9 |
| MS.gene38579.t1 | MTR_1g064230 | 28.287 | 251 | 144 | 8 | 34 | 261 | 35 | 272 | 2.32e-16 | 77.8 |
| MS.gene38579.t1 | MTR_1g061870 | 28.161 | 174 | 117 | 5 | 91 | 258 | 194 | 365 | 9.19e-15 | 74.7 |
| MS.gene38579.t1 | MTR_1g061870 | 27.011 | 174 | 123 | 3 | 93 | 266 | 105 | 274 | 3.37e-12 | 67.0 |
| MS.gene38579.t1 | MTR_7g094660 | 28.108 | 185 | 122 | 5 | 93 | 269 | 643 | 824 | 1.08e-14 | 74.7 |
| MS.gene38579.t1 | MTR_7g102730 | 26.230 | 183 | 123 | 5 | 91 | 263 | 189 | 369 | 5.47e-14 | 72.4 |
| MS.gene38579.t1 | MTR_1g097440 | 28.804 | 184 | 118 | 5 | 91 | 263 | 209 | 390 | 4.46e-13 | 69.7 |
| MS.gene38579.t1 | MTR_6g040190 | 28.261 | 184 | 119 | 5 | 91 | 263 | 200 | 381 | 1.27e-12 | 68.2 |
| MS.gene38579.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 90 | 243 | 5 | 164 | 4.10e-12 | 66.6 |
| MS.gene38579.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 90 | 243 | 5 | 164 | 4.17e-12 | 66.6 |
| MS.gene38579.t1 | MTR_4g122650 | 29.012 | 162 | 103 | 7 | 91 | 248 | 88 | 241 | 1.62e-11 | 65.1 |
| MS.gene38579.t1 | MTR_7g013730 | 34.444 | 90 | 55 | 2 | 88 | 176 | 37 | 123 | 2.09e-11 | 63.2 |
| MS.gene38579.t1 | MTR_1g019150 | 27.869 | 183 | 111 | 4 | 96 | 263 | 216 | 392 | 2.45e-11 | 64.3 |
| MS.gene38579.t1 | MTR_2g026180 | 25.153 | 163 | 108 | 5 | 92 | 243 | 5 | 164 | 2.47e-11 | 64.3 |
| MS.gene38579.t1 | MTR_6g477870 | 36.585 | 82 | 51 | 1 | 91 | 171 | 95 | 176 | 9.05e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38579.t1 | AT4G09040 | 63.043 | 184 | 66 | 2 | 86 | 267 | 89 | 272 | 1.38e-78 | 241 |
| MS.gene38579.t1 | AT4G09040 | 62.637 | 182 | 66 | 2 | 88 | 267 | 31 | 212 | 6.74e-78 | 237 |
| MS.gene38579.t1 | AT2G35410 | 33.054 | 239 | 144 | 3 | 34 | 256 | 28 | 266 | 1.02e-37 | 135 |
| MS.gene38579.t1 | AT1G60000 | 30.645 | 248 | 141 | 9 | 35 | 264 | 24 | 258 | 2.48e-23 | 96.7 |
| MS.gene38579.t1 | AT3G52380 | 32.105 | 190 | 113 | 7 | 80 | 258 | 108 | 292 | 5.98e-23 | 97.1 |
| MS.gene38579.t1 | AT5G50250 | 32.948 | 173 | 104 | 6 | 92 | 258 | 114 | 280 | 6.49e-23 | 95.9 |
| MS.gene38579.t1 | AT4G24770 | 32.184 | 174 | 106 | 6 | 91 | 258 | 150 | 317 | 3.51e-22 | 94.7 |
| MS.gene38579.t1 | AT4G24770 | 32.184 | 174 | 106 | 6 | 91 | 258 | 150 | 317 | 3.51e-22 | 94.7 |
| MS.gene38579.t1 | AT2G37220 | 31.053 | 190 | 106 | 5 | 92 | 259 | 92 | 278 | 1.51e-18 | 84.0 |
| MS.gene38579.t1 | AT3G16380 | 30.055 | 183 | 117 | 4 | 90 | 263 | 201 | 381 | 2.10e-15 | 76.6 |
| MS.gene38579.t1 | AT4G34110 | 29.508 | 183 | 117 | 4 | 91 | 263 | 215 | 395 | 4.41e-15 | 75.9 |
| MS.gene38579.t1 | AT2G36660 | 27.322 | 183 | 121 | 5 | 91 | 263 | 201 | 381 | 1.14e-14 | 74.3 |
| MS.gene38579.t1 | AT2G36660 | 26.901 | 171 | 119 | 4 | 93 | 263 | 114 | 278 | 1.70e-11 | 65.1 |
| MS.gene38579.t1 | AT3G52150 | 30.114 | 176 | 112 | 5 | 92 | 258 | 77 | 250 | 6.97e-13 | 67.4 |
| MS.gene38579.t1 | AT3G52150 | 30.114 | 176 | 112 | 5 | 92 | 258 | 77 | 250 | 6.97e-13 | 67.4 |
| MS.gene38579.t1 | AT1G01080 | 26.601 | 203 | 128 | 5 | 71 | 258 | 88 | 284 | 1.21e-12 | 67.4 |
| MS.gene38579.t1 | AT1G01080 | 26.471 | 204 | 128 | 5 | 71 | 258 | 88 | 285 | 1.47e-12 | 67.0 |
| MS.gene38579.t1 | AT2G23350 | 27.041 | 196 | 123 | 4 | 82 | 263 | 216 | 405 | 2.69e-12 | 67.4 |
| MS.gene38579.t1 | AT1G71770 | 28.108 | 185 | 121 | 4 | 89 | 263 | 237 | 419 | 5.03e-12 | 66.6 |
| MS.gene38579.t1 | AT1G71770 | 28.108 | 185 | 121 | 4 | 89 | 263 | 237 | 419 | 5.03e-12 | 66.6 |
| MS.gene38579.t1 | AT1G22760 | 28.866 | 194 | 122 | 7 | 82 | 263 | 220 | 409 | 1.62e-11 | 65.1 |
| MS.gene38579.t1 | AT1G01080 | 26.425 | 193 | 121 | 5 | 71 | 248 | 88 | 274 | 2.28e-11 | 63.5 |
| MS.gene38579.t1 | AT5G41690 | 30.601 | 183 | 96 | 6 | 93 | 250 | 70 | 246 | 6.62e-11 | 63.2 |
| MS.gene38579.t1 | AT5G41690 | 30.601 | 183 | 96 | 6 | 93 | 250 | 70 | 246 | 6.62e-11 | 63.2 |
| MS.gene38579.t1 | AT5G41690 | 30.601 | 183 | 96 | 6 | 93 | 250 | 70 | 246 | 6.62e-11 | 63.2 |
| MS.gene38579.t1 | AT4G19610 | 29.843 | 191 | 119 | 9 | 78 | 256 | 585 | 772 | 7.87e-11 | 63.2 |
| MS.gene38579.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
| MS.gene38579.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
| MS.gene38579.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
| MS.gene38579.t1 | AT5G55550 | 24.096 | 166 | 108 | 5 | 92 | 243 | 7 | 168 | 8.11e-11 | 62.8 |
Find 66 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAACAAGTTATATGTTAT+TGG | 0.178438 | 3.3:+82049190 | None:intergenic |
| GGGTTTAGCGTTTGTGGAAA+TGG | 0.293091 | 3.3:-82050047 | MS.gene38579:CDS |
| CAAATATGCTAAGCCTAAAA+AGG | 0.298308 | 3.3:-82049242 | MS.gene38579:CDS |
| TTTGTTCCTCGGTGGTTACT+TGG | 0.304393 | 3.3:+82050322 | None:intergenic |
| GTTGTTTGGTTGTGATAATA+AGG | 0.306984 | 3.3:+82050391 | None:intergenic |
| ATGGATAAACGAAGAGAATA+AGG | 0.330328 | 3.3:+82050435 | None:intergenic |
| TGTATAATAAGAACAGAAAC+AGG | 0.337196 | 3.3:-82050069 | MS.gene38579:CDS |
| TGGTTGTGATAATAAGGGTT+GGG | 0.352995 | 3.3:+82050397 | None:intergenic |
| AGAGCTGCAGAAGCTTCTTC+AGG | 0.366986 | 3.3:+82050019 | None:intergenic |
| AGCTTCTTTCTTAGACTTGA+AGG | 0.386679 | 3.3:+82049036 | None:intergenic |
| CCTAGACGGCCATCTGGTTA+TGG | 0.388895 | 3.3:-82049067 | MS.gene38579:CDS |
| TAGTAAGCGGTTTGTTCAAC+TGG | 0.391185 | 3.3:-82048796 | MS.gene38579:CDS |
| CAAACATTTCTTATGAAGTA+AGG | 0.396454 | 3.3:-82049165 | MS.gene38579:CDS |
| AAACAGGGGTTTAGCGTTTG+TGG | 0.413290 | 3.3:-82050053 | MS.gene38579:CDS |
| GGTTTAGCGTTTGTGGAAAT+GGG | 0.418798 | 3.3:-82050046 | MS.gene38579:CDS |
| AGTTGAACAAACCGCTTACT+AGG | 0.422121 | 3.3:+82048798 | None:intergenic |
| CCATAACCAGATGGCCGTCT+AGG | 0.428089 | 3.3:+82049067 | None:intergenic |
| GAAGCTCTTGCCGAGTTTGA+AGG | 0.428323 | 3.3:-82049010 | MS.gene38579:CDS |
| AGAATAAGAAGAGTGTTGTT+TGG | 0.434227 | 3.3:+82050377 | None:intergenic |
| TTACTAGGTGCCACCCTTAG+TGG | 0.434877 | 3.3:+82048813 | None:intergenic |
| ATTGGCTTCCGTTCCACTGA+TGG | 0.442268 | 3.3:+82049208 | None:intergenic |
| GAACTCTTCGGTTTGTTCCT+CGG | 0.445669 | 3.3:+82050311 | None:intergenic |
| GGTGGTTACTTGGGTTTGTT+CGG | 0.446564 | 3.3:+82050332 | None:intergenic |
| ACGAAGAGAATAAGGATTGA+GGG | 0.446924 | 3.3:+82050443 | None:intergenic |
| GGTTGTGATAATAAGGGTTG+GGG | 0.447801 | 3.3:+82050398 | None:intergenic |
| AATGCTGCGTAGGAGTTTGA+CGG | 0.476117 | 3.3:-82049280 | MS.gene38579:intron |
| TTGTTTGGTTGTGATAATAA+GGG | 0.487486 | 3.3:+82050392 | None:intergenic |
| TTGGTTGTGATAATAAGGGT+TGG | 0.494016 | 3.3:+82050396 | None:intergenic |
| AACGAAGAGAATAAGGATTG+AGG | 0.498160 | 3.3:+82050442 | None:intergenic |
| GAGAACCCTAGACGGCCATC+TGG | 0.499676 | 3.3:-82049073 | MS.gene38579:CDS |
| CAACTGGCGGAGGAGAGTGC+AGG | 0.500053 | 3.3:-82048780 | MS.gene38579:CDS |
| TGGAAAAGTCCTTGATGTTG+AGG | 0.503374 | 3.3:-82050211 | MS.gene38579:intron |
| CTTGTCAAAGTCGAAAGAGT+TGG | 0.505319 | 3.3:+82050479 | None:intergenic |
| TTGTTCCTCGGTGGTTACTT+GGG | 0.517713 | 3.3:+82050323 | None:intergenic |
| CATAACCAGATGGCCGTCTA+GGG | 0.521702 | 3.3:+82049068 | None:intergenic |
| AAGAGTTGGTTATTATTACA+TGG | 0.525296 | 3.3:+82050493 | None:intergenic |
| TTTGTGGAAGATAATTGAGT+TGG | 0.527851 | 3.3:+82050519 | None:intergenic |
| TTGGGTTTGTTCGGAAGTAG+AGG | 0.540338 | 3.3:+82050341 | None:intergenic |
| CGGGCTTACATACATACGAT+TGG | 0.544479 | 3.3:+82049987 | None:intergenic |
| TCTTGCCGAGTTTGAAGGAA+AGG | 0.556428 | 3.3:-82049005 | MS.gene38579:intron |
| TGGTAAAGTTGTTTCTGCAG+AGG | 0.561558 | 3.3:-82049107 | MS.gene38579:CDS |
| CCGAAGAGTTCTCTACTACC+AGG | 0.563866 | 3.3:-82050299 | MS.gene38579:CDS |
| TGGGGTATGAGTATGAGTAA+TGG | 0.566390 | 3.3:+82050416 | None:intergenic |
| AGTTACCTTTCCTTCAAACT+CGG | 0.570688 | 3.3:+82049000 | None:intergenic |
| GCGGTTTGTTCAACTGGCGG+AGG | 0.574915 | 3.3:-82048790 | MS.gene38579:CDS |
| GGAGAAAATACGGCCATCAG+TGG | 0.578295 | 3.3:-82049221 | MS.gene38579:CDS |
| CCTGGTAGTAGAGAACTCTT+CGG | 0.586085 | 3.3:+82050299 | None:intergenic |
| AGTAAGGTCTAAAGACCTCA+AGG | 0.590952 | 3.3:-82049149 | MS.gene38579:CDS |
| TATGGGAAGGCCACTAAGGG+TGG | 0.592174 | 3.3:-82048823 | MS.gene38579:CDS |
| AACATTCTGAGCAAGTAACC+TGG | 0.593923 | 3.3:+82050281 | None:intergenic |
| CATATTTGATATTTATTACG+CGG | 0.594638 | 3.3:+82049257 | None:intergenic |
| AACTGGCGGAGGAGAGTGCA+GGG | 0.612225 | 3.3:-82048779 | MS.gene38579:CDS |
| TACTTGCTCAGAATGTTCCA+TGG | 0.612581 | 3.3:-82050275 | MS.gene38579:CDS |
| CTCTTCGGTTTGTTCCTCGG+TGG | 0.623297 | 3.3:+82050314 | None:intergenic |
| CAAAGAACGAATATCTTCAG+TGG | 0.626913 | 3.3:+82050245 | None:intergenic |
| TAAGCGGTTTGTTCAACTGG+CGG | 0.631391 | 3.3:-82048793 | MS.gene38579:CDS |
| AAATACGGCCATCAGTGGAA+CGG | 0.640291 | 3.3:-82049216 | MS.gene38579:CDS |
| TTCTGAGTTGAGCGTCAATG+AGG | 0.642846 | 3.3:-82048742 | MS.gene38579:CDS |
| TCTTCAGTGGTACTTGACCA+TGG | 0.649901 | 3.3:+82050258 | None:intergenic |
| GACACAAATCCATAACCAGA+TGG | 0.653420 | 3.3:+82049058 | None:intergenic |
| TCTTTCATGAGAACCCTAGA+CGG | 0.656239 | 3.3:-82049081 | MS.gene38579:CDS |
| TATAATAAGAACAGAAACAG+GGG | 0.661478 | 3.3:-82050067 | MS.gene38579:CDS |
| GTATAATAAGAACAGAAACA+GGG | 0.680373 | 3.3:-82050068 | MS.gene38579:CDS |
| TAAGGGTGGCACCTAGTAAG+CGG | 0.686102 | 3.3:-82048809 | MS.gene38579:CDS |
| GAAGATAATTGAGTTGGACA+TGG | 0.691814 | 3.3:+82050525 | None:intergenic |
| ACAAACCCAAGTAACCACCG+AGG | 0.809424 | 3.3:-82050328 | MS.gene38579:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAGAAAATAGTTATTATT+AGG | - | chr3.3:82049670-82049689 | MS.gene38579:intron | 15.0% |
| !!! | TTTTTTGTTTGTTTTTGTTT+TGG | - | chr3.3:82049157-82049176 | MS.gene38579:CDS | 15.0% |
| !! | ACAAACAAGTTATATGTTAT+TGG | + | chr3.3:82050084-82050103 | None:intergenic | 20.0% |
| !! | AGATAATTATCTTAGTTACT+TGG | + | chr3.3:82049759-82049778 | None:intergenic | 20.0% |
| !! | AGTTATTATTAGGTGAAAAT+TGG | - | chr3.3:82049680-82049699 | MS.gene38579:intron | 20.0% |
| !! | ATTATTTAGTATTGTGACAT+TGG | - | chr3.3:82050400-82050419 | MS.gene38579:CDS | 20.0% |
| !! | CATATTTGATATTTATTACG+CGG | + | chr3.3:82050017-82050036 | None:intergenic | 20.0% |
| !! | CCAAATTCAAATTAACAAAT+TGG | + | chr3.3:82050311-82050330 | None:intergenic | 20.0% |
| !! | TATTATGTTCAATTCATTTC+AGG | - | chr3.3:82049105-82049124 | MS.gene38579:CDS | 20.0% |
| !!! | ATATTTCTGCAGAATTTTAT+GGG | - | chr3.3:82050431-82050450 | MS.gene38579:CDS | 20.0% |
| !!! | CCAATTTGTTAATTTGAATT+TGG | - | chr3.3:82050308-82050327 | MS.gene38579:CDS | 20.0% |
| ! | AAGAGGGTGAAATTTAATAT+CGG | + | chr3.3:82049307-82049326 | None:intergenic | 25.0% |
| ! | CAAACATTTCTTATGAAGTA+AGG | - | chr3.3:82050106-82050125 | MS.gene38579:intron | 25.0% |
| ! | CAGATAAACACATCAAATTA+AGG | + | chr3.3:82049960-82049979 | None:intergenic | 25.0% |
| ! | GAATATGATACAATTAGAGT+AGG | - | chr3.3:82049718-82049737 | MS.gene38579:intron | 25.0% |
| ! | GTATAATAAGAACAGAAACA+GGG | - | chr3.3:82049203-82049222 | MS.gene38579:CDS | 25.0% |
| ! | TATAATAAGAACAGAAACAG+GGG | - | chr3.3:82049204-82049223 | MS.gene38579:CDS | 25.0% |
| ! | TGTATAATAAGAACAGAAAC+AGG | - | chr3.3:82049202-82049221 | MS.gene38579:CDS | 25.0% |
| ! | TGTTAGATATAGTTACTAGT+TGG | + | chr3.3:82049816-82049835 | None:intergenic | 25.0% |
| ! | TTGTTTGGTTGTGATAATAA+GGG | + | chr3.3:82048882-82048901 | None:intergenic | 25.0% |
| !! | AACGTGTGAATTTTATAGAT+AGG | - | chr3.3:82049353-82049372 | MS.gene38579:intron | 25.0% |
| !! | AAGAGTTGGTTATTATTACA+TGG | + | chr3.3:82048781-82048800 | None:intergenic | 25.0% |
| !! | ACGTGTGAATTTTATAGATA+GGG | - | chr3.3:82049354-82049373 | MS.gene38579:intron | 25.0% |
| !! | CGTTCTTTGTTTGAAAAATA+TGG | - | chr3.3:82049040-82049059 | MS.gene38579:CDS | 25.0% |
| !! | GATTTGATAGAATTGGTTTA+AGG | - | chr3.3:82049645-82049664 | MS.gene38579:intron | 25.0% |
| !! | GTAATTTTCTATGTCAAACT+CGG | - | chr3.3:82049603-82049622 | MS.gene38579:intron | 25.0% |
| !! | TATTATTACATGGTGTTTTG+TGG | + | chr3.3:82048771-82048790 | None:intergenic | 25.0% |
| !!! | AAATTTTAACCGCAATTTCT+TGG | - | chr3.3:82050361-82050380 | MS.gene38579:CDS | 25.0% |
| !!! | GATATTTCTGCAGAATTTTA+TGG | - | chr3.3:82050430-82050449 | MS.gene38579:CDS | 25.0% |
| !!! | GATTTGTTAGAAATGGTTTA+CGG | + | chr3.3:82049792-82049811 | None:intergenic | 25.0% |
| ACAGAGAGATTTGATAGAAT+TGG | - | chr3.3:82049638-82049657 | MS.gene38579:intron | 30.0% | |
| AGAGGGTGAAATTTAATATC+GGG | + | chr3.3:82049306-82049325 | None:intergenic | 30.0% | |
| AGCCTAAAAAGGAGAAAATA+CGG | - | chr3.3:82050040-82050059 | MS.gene38579:CDS | 30.0% | |
| ATCAACAATGTTGTAACTTG+CGG | + | chr3.3:82049573-82049592 | None:intergenic | 30.0% | |
| ATGGATAAACGAAGAGAATA+AGG | + | chr3.3:82048839-82048858 | None:intergenic | 30.0% | |
| CAAATATGCTAAGCCTAAAA+AGG | - | chr3.3:82050029-82050048 | MS.gene38579:CDS | 30.0% | |
| CTTAGTTACTTGGATTATGA+AGG | + | chr3.3:82049749-82049768 | None:intergenic | 30.0% | |
| GATAAAAAACCTCAACATCA+AGG | + | chr3.3:82049072-82049091 | None:intergenic | 30.0% | |
| GCTTTATCAAATCGAAAAGA+GGG | + | chr3.3:82049323-82049342 | None:intergenic | 30.0% | |
| GTTGTTTGGTTGTGATAATA+AGG | + | chr3.3:82048883-82048902 | None:intergenic | 30.0% | |
| TTTGTGGAAGATAATTGAGT+TGG | + | chr3.3:82048755-82048774 | None:intergenic | 30.0% | |
| ! | AGCTTTATCAAATCGAAAAG+AGG | + | chr3.3:82049324-82049343 | None:intergenic | 30.0% |
| ! | TGAAATTTTCACACCCATTA+GGG | - | chr3.3:82049845-82049864 | MS.gene38579:intron | 30.0% |
| ! | TTGATAGAATTGGTTTAAGG+TGG | - | chr3.3:82049648-82049667 | MS.gene38579:intron | 30.0% |
| ! | TTTTTATGTGTCTTCTGTTG+TGG | - | chr3.3:82049907-82049926 | MS.gene38579:intron | 30.0% |
| !! | AATCGTTGTTATTTCGCAAT+TGG | - | chr3.3:82049468-82049487 | MS.gene38579:intron | 30.0% |
| !! | AGAATAAGAAGAGTGTTGTT+TGG | + | chr3.3:82048897-82048916 | None:intergenic | 30.0% |
| !! | AGTTGGAGATTTGTTAGAAA+TGG | + | chr3.3:82049799-82049818 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGTTTTGGCCTTT+CGG | - | chr3.3:82049165-82049184 | MS.gene38579:CDS | 30.0% |
| AACGAAGAGAATAAGGATTG+AGG | + | chr3.3:82048832-82048851 | None:intergenic | 35.0% | |
| ACGAAGAGAATAAGGATTGA+GGG | + | chr3.3:82048831-82048850 | None:intergenic | 35.0% | |
| AGCTTCTTTCTTAGACTTGA+AGG | + | chr3.3:82050238-82050257 | None:intergenic | 35.0% | |
| AGTTACCTTTCCTTCAAACT+CGG | + | chr3.3:82050274-82050293 | None:intergenic | 35.0% | |
| ATTGAAAGCTTAAACCCGAA+AGG | + | chr3.3:82049183-82049202 | None:intergenic | 35.0% | |
| CAAAGAACGAATATCTTCAG+TGG | + | chr3.3:82049029-82049048 | None:intergenic | 35.0% | |
| CTTCTGTTGTGGAATTTACT+TGG | - | chr3.3:82049918-82049937 | MS.gene38579:intron | 35.0% | |
| GGAATTTACTTGGCATCTAT+AGG | - | chr3.3:82049928-82049947 | MS.gene38579:intron | 35.0% | |
| GTGTTATCTTATCCCCTAAT+GGG | + | chr3.3:82049861-82049880 | None:intergenic | 35.0% | |
| TATAGCACACTATAGCATAG+CGG | - | chr3.3:82049532-82049551 | MS.gene38579:intron | 35.0% | |
| TGGTTGTGATAATAAGGGTT+GGG | + | chr3.3:82048877-82048896 | None:intergenic | 35.0% | |
| TGTGTTATCTTATCCCCTAA+TGG | + | chr3.3:82049862-82049881 | None:intergenic | 35.0% | |
| TTACTTGGCATCTATAGGAA+GGG | - | chr3.3:82049933-82049952 | MS.gene38579:intron | 35.0% | |
| TTGGTTGTGATAATAAGGGT+TGG | + | chr3.3:82048878-82048897 | None:intergenic | 35.0% | |
| TTTACTTGGCATCTATAGGA+AGG | - | chr3.3:82049932-82049951 | MS.gene38579:intron | 35.0% | |
| ! | CTGAAATTTTCACACCCATT+AGG | - | chr3.3:82049844-82049863 | MS.gene38579:intron | 35.0% |
| ! | GAAATTTTCACACCCATTAG+GGG | - | chr3.3:82049846-82049865 | MS.gene38579:intron | 35.0% |
| ! | GCAACTGCTATTTGACAAAA+CGG | + | chr3.3:82049431-82049450 | None:intergenic | 35.0% |
| ! | TTCTGCAGAATTTTATGGGA+AGG | - | chr3.3:82050435-82050454 | MS.gene38579:CDS | 35.0% |
| !! | GAAGATAATTGAGTTGGACA+TGG | + | chr3.3:82048749-82048768 | None:intergenic | 35.0% |
| !!! | CCTCAAGGAGTTTTTTGATT+CGG | - | chr3.3:82050137-82050156 | MS.gene38579:intron | 35.0% |
| !!! | CTCAAGGAGTTTTTTGATTC+GGG | - | chr3.3:82050138-82050157 | MS.gene38579:intron | 35.0% |
| !!! | TGTTTTTGTTTTGGCCTTTC+GGG | - | chr3.3:82049166-82049185 | MS.gene38579:CDS | 35.0% |
| AACATTCTGAGCAAGTAACC+TGG | + | chr3.3:82048993-82049012 | None:intergenic | 40.0% | |
| ACCGCAATTTCTTGGAGTTA+CGG | - | chr3.3:82050369-82050388 | MS.gene38579:CDS | 40.0% | |
| AGTAAGGTCTAAAGACCTCA+AGG | - | chr3.3:82050122-82050141 | MS.gene38579:intron | 40.0% | |
| AGTTGAACAAACCGCTTACT+AGG | + | chr3.3:82050476-82050495 | None:intergenic | 40.0% | |
| CCGAATCAAAAAACTCCTTG+AGG | + | chr3.3:82050140-82050159 | None:intergenic | 40.0% | |
| CTTGTCAAAGTCGAAAGAGT+TGG | + | chr3.3:82048795-82048814 | None:intergenic | 40.0% | |
| GACACAAATCCATAACCAGA+TGG | + | chr3.3:82050216-82050235 | None:intergenic | 40.0% | |
| GGGTGTGAAAATTTCAGTGA+TGG | + | chr3.3:82049841-82049860 | None:intergenic | 40.0% | |
| GGTTGTGATAATAAGGGTTG+GGG | + | chr3.3:82048876-82048895 | None:intergenic | 40.0% | |
| GGTTTAGCGTTTGTGGAAAT+GGG | - | chr3.3:82049225-82049244 | MS.gene38579:CDS | 40.0% | |
| TACTTGCTCAGAATGTTCCA+TGG | - | chr3.3:82048996-82049015 | MS.gene38579:intron | 40.0% | |
| TCATTCTTTGAATGCTGCGT+AGG | - | chr3.3:82049981-82050000 | MS.gene38579:intron | 40.0% | |
| TCCGTAACTCCAAGAAATTG+CGG | + | chr3.3:82050373-82050392 | None:intergenic | 40.0% | |
| TCTTTCATGAGAACCCTAGA+CGG | - | chr3.3:82050190-82050209 | MS.gene38579:intron | 40.0% | |
| TGGAAAAGTCCTTGATGTTG+AGG | - | chr3.3:82049060-82049079 | MS.gene38579:CDS | 40.0% | |
| TGGGGTATGAGTATGAGTAA+TGG | + | chr3.3:82048858-82048877 | None:intergenic | 40.0% | |
| ! | ATTTTATGGGAAGGCCACTA+AGG | - | chr3.3:82050444-82050463 | MS.gene38579:CDS | 40.0% |
| ! | GGCCGTATTTTCTCCTTTTT+AGG | + | chr3.3:82050045-82050064 | None:intergenic | 40.0% |
| ! | TAGTAAGCGGTTTGTTCAAC+TGG | - | chr3.3:82050475-82050494 | MS.gene38579:CDS | 40.0% |
| ! | TTTTATGGGAAGGCCACTAA+GGG | - | chr3.3:82050445-82050464 | MS.gene38579:CDS | 40.0% |
| !! | TGGTAAAGTTGTTTCTGCAG+AGG | - | chr3.3:82050164-82050183 | MS.gene38579:intron | 40.0% |
| !!! | GAGTTTTTTGATTCGGGAAC+TGG | - | chr3.3:82050144-82050163 | MS.gene38579:intron | 40.0% |
| AAACAGGGGTTTAGCGTTTG+TGG | - | chr3.3:82049218-82049237 | MS.gene38579:CDS | 45.0% | |
| AAATACGGCCATCAGTGGAA+CGG | - | chr3.3:82050055-82050074 | MS.gene38579:CDS | 45.0% | |
| AATGCTGCGTAGGAGTTTGA+CGG | - | chr3.3:82049991-82050010 | MS.gene38579:intron | 45.0% | |
| CCTGGTAGTAGAGAACTCTT+CGG | + | chr3.3:82048975-82048994 | None:intergenic | 45.0% | |
| CGGGCTTACATACATACGAT+TGG | + | chr3.3:82049287-82049306 | None:intergenic | 45.0% | |
| GCGTCAAATAGCAGTCATAG+TGG | - | chr3.3:82049506-82049525 | MS.gene38579:intron | 45.0% | |
| GGGTTTAGCGTTTGTGGAAA+TGG | - | chr3.3:82049224-82049243 | MS.gene38579:CDS | 45.0% | |
| TCTTCAGTGGTACTTGACCA+TGG | + | chr3.3:82049016-82049035 | None:intergenic | 45.0% | |
| TCTTGCCGAGTTTGAAGGAA+AGG | - | chr3.3:82050266-82050285 | MS.gene38579:CDS | 45.0% | |
| TTGTTCCTCGGTGGTTACTT+GGG | + | chr3.3:82048951-82048970 | None:intergenic | 45.0% | |
| TTTGTTCCTCGGTGGTTACT+TGG | + | chr3.3:82048952-82048971 | None:intergenic | 45.0% | |
| ! | GAACTCTTCGGTTTGTTCCT+CGG | + | chr3.3:82048963-82048982 | None:intergenic | 45.0% |
| ! | GGTGGTTACTTGGGTTTGTT+CGG | + | chr3.3:82048942-82048961 | None:intergenic | 45.0% |
| ! | TAAGCGGTTTGTTCAACTGG+CGG | - | chr3.3:82050478-82050497 | MS.gene38579:CDS | 45.0% |
| ! | TTCTGAGTTGAGCGTCAATG+AGG | - | chr3.3:82050529-82050548 | MS.gene38579:CDS | 45.0% |
| ! | TTGGGTTTGTTCGGAAGTAG+AGG | + | chr3.3:82048933-82048952 | None:intergenic | 45.0% |
| ACAAACCCAAGTAACCACCG+AGG | - | chr3.3:82048943-82048962 | MS.gene38579:intron | 50.0% | |
| AGAGCTGCAGAAGCTTCTTC+AGG | + | chr3.3:82049255-82049274 | None:intergenic | 50.0% | |
| CATAACCAGATGGCCGTCTA+GGG | + | chr3.3:82050206-82050225 | None:intergenic | 50.0% | |
| CCGAAGAGTTCTCTACTACC+AGG | - | chr3.3:82048972-82048991 | MS.gene38579:intron | 50.0% | |
| GAAGCTCTTGCCGAGTTTGA+AGG | - | chr3.3:82050261-82050280 | MS.gene38579:CDS | 50.0% | |
| GGAGAAAATACGGCCATCAG+TGG | - | chr3.3:82050050-82050069 | MS.gene38579:CDS | 50.0% | |
| TAAGGGTGGCACCTAGTAAG+CGG | - | chr3.3:82050462-82050481 | MS.gene38579:CDS | 50.0% | |
| ! | ATTGGCTTCCGTTCCACTGA+TGG | + | chr3.3:82050066-82050085 | None:intergenic | 50.0% |
| ! | TTACTAGGTGCCACCCTTAG+TGG | + | chr3.3:82050461-82050480 | None:intergenic | 50.0% |
| CCATAACCAGATGGCCGTCT+AGG | + | chr3.3:82050207-82050226 | None:intergenic | 55.0% | |
| CCTAGACGGCCATCTGGTTA+TGG | - | chr3.3:82050204-82050223 | MS.gene38579:intron | 55.0% | |
| TATGGGAAGGCCACTAAGGG+TGG | - | chr3.3:82050448-82050467 | MS.gene38579:CDS | 55.0% | |
| ! | CTCTTCGGTTTGTTCCTCGG+TGG | + | chr3.3:82048960-82048979 | None:intergenic | 55.0% |
| GAGAACCCTAGACGGCCATC+TGG | - | chr3.3:82050198-82050217 | MS.gene38579:intron | 60.0% | |
| ! | AACTGGCGGAGGAGAGTGCA+GGG | - | chr3.3:82050492-82050511 | MS.gene38579:CDS | 60.0% |
| ! | GCGGTTTGTTCAACTGGCGG+AGG | - | chr3.3:82050481-82050500 | MS.gene38579:CDS | 60.0% |
| ! | CAACTGGCGGAGGAGAGTGC+AGG | - | chr3.3:82050491-82050510 | MS.gene38579:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 82048719 | 82050574 | 82048719 | ID=MS.gene38579 |
| chr3.3 | mRNA | 82048719 | 82050574 | 82048719 | ID=MS.gene38579.t1;Parent=MS.gene38579 |
| chr3.3 | exon | 82050212 | 82050574 | 82050212 | ID=MS.gene38579.t1.exon1;Parent=MS.gene38579.t1 |
| chr3.3 | CDS | 82050212 | 82050574 | 82050212 | ID=cds.MS.gene38579.t1;Parent=MS.gene38579.t1 |
| chr3.3 | exon | 82050000 | 82050098 | 82050000 | ID=MS.gene38579.t1.exon2;Parent=MS.gene38579.t1 |
| chr3.3 | CDS | 82050000 | 82050098 | 82050000 | ID=cds.MS.gene38579.t1;Parent=MS.gene38579.t1 |
| chr3.3 | exon | 82049006 | 82049290 | 82049006 | ID=MS.gene38579.t1.exon3;Parent=MS.gene38579.t1 |
| chr3.3 | CDS | 82049006 | 82049290 | 82049006 | ID=cds.MS.gene38579.t1;Parent=MS.gene38579.t1 |
| chr3.3 | exon | 82048719 | 82048850 | 82048719 | ID=MS.gene38579.t1.exon4;Parent=MS.gene38579.t1 |
| chr3.3 | CDS | 82048719 | 82048850 | 82048719 | ID=cds.MS.gene38579.t1;Parent=MS.gene38579.t1 |
| Gene Sequence |
| Protein sequence |
