AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43626


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43626.t1 MTR_2g017965 94.164 377 22 0 1 377 1 377 0.0 738
MS.gene43626.t1 MTR_2g017955 75.853 381 87 2 1 377 1 380 0.0 587
MS.gene43626.t1 MTR_2g017915 76.127 377 68 3 1 377 1 355 0.0 568
MS.gene43626.t1 MTR_2g017925 76.127 377 84 3 1 377 1 371 0.0 566
MS.gene43626.t1 MTR_2g017875 58.380 358 143 6 6 360 6 360 7.54e-137 394
MS.gene43626.t1 MTR_8g087870 55.402 361 149 7 1 360 1 350 2.28e-131 380
MS.gene43626.t1 MTR_3g023220 56.389 360 149 6 1 360 1 352 6.09e-130 377
MS.gene43626.t1 MTR_2g017925 73.622 254 62 2 124 377 20 268 5.11e-127 366
MS.gene43626.t1 MTR_8g087890 48.169 355 172 8 14 360 12 362 2.51e-108 322
MS.gene43626.t1 MTR_0565s0010 42.896 366 193 8 3 360 7 364 7.58e-97 293
MS.gene43626.t1 MTR_3g024510 42.896 366 195 9 5 360 8 369 1.58e-96 292
MS.gene43626.t1 MTR_2g018015 46.594 367 128 7 1 363 1 303 2.98e-87 266
MS.gene43626.t1 MTR_3g005660 41.758 364 193 9 8 359 12 368 2.65e-86 266
MS.gene43626.t1 MTR_2g017895 50.357 280 119 4 82 360 6 266 8.84e-83 253
MS.gene43626.t1 MTR_3g005650 40.385 364 201 10 4 360 2 356 1.64e-81 253
MS.gene43626.t1 MTR_3g098270 40.988 344 182 11 34 363 35 371 1.67e-72 231
MS.gene43626.t1 MTR_4g035353 35.121 373 211 12 5 360 4 362 1.33e-61 202
MS.gene43626.t1 MTR_7g116520 34.153 366 224 9 4 359 6 364 1.88e-60 199
MS.gene43626.t1 MTR_5g078210 38.245 319 181 9 35 343 27 339 9.32e-60 197
MS.gene43626.t1 MTR_2g033930 36.438 365 207 13 9 360 10 362 3.04e-59 196
MS.gene43626.t1 MTR_7g116570 34.530 362 219 9 11 359 8 364 5.95e-58 193
MS.gene43626.t1 MTR_4g122200 36.141 368 212 12 7 360 9 367 1.07e-56 189
MS.gene43626.t1 MTR_7g116500 33.795 361 218 10 15 359 8 363 6.36e-56 187
MS.gene43626.t1 MTR_1g079530 33.151 365 232 7 8 367 4 361 1.27e-54 184
MS.gene43626.t1 MTR_1g079540 32.840 338 213 8 34 362 32 364 1.24e-52 179
MS.gene43626.t1 MTR_1g069175 31.915 376 234 10 1 362 1 368 1.40e-51 176
MS.gene43626.t1 MTR_6g021530 34.483 348 200 9 5 336 4 339 1.60e-51 176
MS.gene43626.t1 MTR_8g079050 32.514 366 227 11 9 358 12 373 1.63e-51 176
MS.gene43626.t1 MTR_1g024890 32.743 339 214 8 33 362 32 365 1.80e-51 176
MS.gene43626.t1 MTR_3g021460 34.605 367 210 13 4 360 3 349 2.68e-51 175
MS.gene43626.t1 MTR_4g108690 38.095 315 177 10 35 337 29 337 6.62e-51 174
MS.gene43626.t1 MTR_2g461580 34.877 367 213 13 4 362 3 351 8.40e-51 174
MS.gene43626.t1 MTR_7g116510 33.138 341 213 9 29 359 21 356 1.20e-50 174
MS.gene43626.t1 MTR_3g435540 36.311 347 195 12 5 338 1 334 9.96e-50 171
MS.gene43626.t1 MTR_5g093090 31.720 372 223 12 5 359 3 360 2.26e-49 170
MS.gene43626.t1 MTR_2g084585 35.057 348 200 14 5 337 4 340 2.88e-49 169
MS.gene43626.t1 MTR_2g033920 35.514 321 188 11 30 337 32 346 1.16e-48 168
MS.gene43626.t1 MTR_5g009100 32.743 339 211 12 35 362 48 380 6.42e-47 164
MS.gene43626.t1 MTR_7g008060 31.686 344 206 9 26 359 26 350 1.01e-46 163
MS.gene43626.t1 MTR_4g019880 30.588 340 222 7 33 362 32 367 6.67e-46 161
MS.gene43626.t1 MTR_1g025720 32.394 355 218 13 1 339 1 349 7.87e-46 160
MS.gene43626.t1 MTR_3g052480 32.479 351 202 14 30 359 30 366 1.62e-45 160
MS.gene43626.t1 MTR_4g056160 35.380 342 193 12 13 338 12 341 1.80e-45 159
MS.gene43626.t1 MTR_3g052580 29.504 383 238 12 1 367 1 367 2.07e-45 160
MS.gene43626.t1 MTR_3g052580 29.630 378 234 12 7 368 6 367 2.46e-45 160
MS.gene43626.t1 MTR_3g052490 32.376 383 216 17 1 359 1 364 2.59e-44 157
MS.gene43626.t1 MTR_4g056280 32.845 341 207 11 10 336 7 339 3.85e-44 156
MS.gene43626.t1 MTR_3g464730 33.149 362 214 14 1 348 1 348 6.43e-44 155
MS.gene43626.t1 MTR_1g025700 32.571 350 203 11 3 331 16 353 2.07e-43 155
MS.gene43626.t1 MTR_1g025760 32.754 345 204 13 9 332 48 385 2.64e-43 155
MS.gene43626.t1 MTR_5g084750 31.977 344 207 13 8 337 10 340 6.65e-43 153
MS.gene43626.t1 MTR_5g078210 40.171 234 133 6 35 265 27 256 1.50e-42 151
MS.gene43626.t1 MTR_5g022630 35.494 324 184 11 31 337 41 356 3.31e-42 151
MS.gene43626.t1 MTR_5g074270 32.209 326 197 12 28 337 28 345 2.57e-41 149
MS.gene43626.t1 MTR_3g082830 32.919 322 196 12 29 337 34 348 4.94e-41 148
MS.gene43626.t1 MTR_0009s0250 31.595 326 192 11 29 341 29 336 5.66e-41 147
MS.gene43626.t1 MTR_3g114090 33.546 313 188 9 32 331 35 340 8.93e-41 147
MS.gene43626.t1 MTR_5g084770 30.484 351 218 12 1 337 1 339 1.14e-40 147
MS.gene43626.t1 MTR_2g100620 33.231 325 188 13 31 337 29 342 3.20e-40 145
MS.gene43626.t1 MTR_1g025680 34.796 319 191 11 31 337 32 345 4.56e-40 147
MS.gene43626.t1 MTR_5g022640 34.049 326 197 11 31 343 41 361 1.07e-39 145
MS.gene43626.t1 MTR_5g084790 32.647 340 206 14 11 337 13 342 1.52e-39 144
MS.gene43626.t1 MTR_8g074560 31.412 347 210 13 4 330 1 339 2.78e-39 144
MS.gene43626.t1 MTR_8g075230 31.672 341 208 13 11 335 14 345 2.90e-39 143
MS.gene43626.t1 MTR_8g074570 30.376 372 217 16 9 359 20 370 1.22e-38 142
MS.gene43626.t1 MTR_8g014910 31.921 354 212 14 1 337 2 343 1.03e-37 139
MS.gene43626.t1 MTR_8g022810 31.250 336 206 13 14 331 18 346 1.35e-37 139
MS.gene43626.t1 MTR_4g087985 28.736 348 217 13 13 337 16 355 2.56e-37 138
MS.gene43626.t1 MTR_2g044100 29.897 388 226 18 8 365 10 381 3.51e-37 139
MS.gene43626.t1 MTR_8g031390 29.873 395 225 16 9 373 6 378 3.61e-37 138
MS.gene43626.t1 MTR_2g033920 38.655 238 138 7 30 263 32 265 4.58e-37 136
MS.gene43626.t1 MTR_1g025780 31.195 343 209 13 14 336 14 349 7.90e-37 137
MS.gene43626.t1 MTR_8g031400 29.919 371 223 15 13 361 10 365 3.50e-36 135
MS.gene43626.t1 MTR_2g015080 29.395 347 214 13 14 337 21 359 1.02e-35 134
MS.gene43626.t1 MTR_5g093090 32.119 302 179 10 5 292 3 292 8.33e-35 130
MS.gene43626.t1 MTR_8g075200 29.261 352 225 13 3 336 6 351 1.14e-34 132
MS.gene43626.t1 MTR_8g031430 29.459 370 224 14 14 361 11 365 2.61e-34 130
MS.gene43626.t1 MTR_8g031420 29.532 342 213 11 34 361 36 363 5.71e-34 129
MS.gene43626.t1 MTR_0127s0040 32.645 242 150 5 127 360 1 237 8.15e-34 125
MS.gene43626.t1 MTR_8g022790 30.028 353 219 13 19 360 25 360 9.55e-34 129
MS.gene43626.t1 MTR_8g075220 28.451 355 229 13 3 336 5 355 8.45e-33 126
MS.gene43626.t1 MTR_3g114120 30.154 325 201 13 31 339 45 359 8.84e-33 126
MS.gene43626.t1 MTR_1g025910 32.092 349 192 17 38 358 41 372 3.11e-32 125
MS.gene43626.t1 MTR_5g083040 29.909 331 202 13 29 338 28 349 5.38e-31 121
MS.gene43626.t1 MTR_2g017945 59.783 92 33 1 290 377 88 179 1.24e-29 113
MS.gene43626.t1 MTR_8g031390 30.868 311 175 12 9 299 6 296 3.41e-29 115
MS.gene43626.t1 MTR_8g074580 26.634 413 227 15 9 359 19 417 3.90e-29 117
MS.gene43626.t1 MTR_8g022810 32.432 222 139 6 14 230 18 233 1.21e-27 111
MS.gene43626.t1 MTR_1g060490 28.213 319 190 15 34 335 38 334 5.63e-27 110
MS.gene43626.t1 MTR_1g060500 29.283 321 188 14 34 333 41 343 2.25e-26 108
MS.gene43626.t1 MTR_1g079590 35.632 174 108 4 33 204 31 202 7.31e-25 101
MS.gene43626.t1 MTR_1g030340 25.781 384 234 12 5 352 11 379 4.78e-24 102
MS.gene43626.t1 MTR_1g092690 26.498 317 191 12 34 332 52 344 1.56e-23 100
MS.gene43626.t1 MTR_7g104220 26.462 325 197 15 28 333 37 338 1.84e-23 100
MS.gene43626.t1 MTR_5g093090 33.333 213 125 7 5 208 3 207 3.71e-23 96.7
MS.gene43626.t1 MTR_8g089805 24.728 368 230 13 5 336 11 367 1.75e-22 98.2
MS.gene43626.t1 MTR_6g007095 27.616 344 197 11 28 337 36 361 6.27e-22 98.2
MS.gene43626.t1 MTR_6g007095 27.358 318 184 13 61 353 394 689 4.76e-21 95.5
MS.gene43626.t1 MTR_6g007090 27.371 369 202 16 11 337 15 359 8.01e-22 96.3
MS.gene43626.t1 MTR_7g033150 26.823 384 208 13 13 344 10 372 1.67e-21 95.1
MS.gene43626.t1 MTR_1g030275 27.434 339 197 13 32 336 38 361 1.97e-21 95.1
MS.gene43626.t1 MTR_1g092750 27.607 326 178 13 34 332 41 335 2.75e-21 94.4
MS.gene43626.t1 MTR_7g116870 26.301 365 210 15 13 336 9 355 6.87e-21 93.6
MS.gene43626.t1 MTR_7g087190 25.729 377 233 13 5 344 13 379 9.72e-21 93.2
MS.gene43626.t1 MTR_2g087292 26.163 344 158 12 3 338 9 264 1.24e-20 91.3
MS.gene43626.t1 MTR_2g015630 29.428 367 208 18 6 337 5 355 3.17e-20 91.7
MS.gene43626.t1 MTR_6g049220 31.771 192 78 5 21 209 18 159 7.22e-20 86.3
MS.gene43626.t1 MTR_1g092760 25.776 322 190 11 34 333 40 334 8.37e-20 89.7
MS.gene43626.t1 MTR_4g036375 31.034 174 114 5 10 180 7 177 9.24e-20 86.7
MS.gene43626.t1 MTR_3g463930 28.857 350 183 19 34 337 45 374 5.10e-19 88.2
MS.gene43626.t1 MTR_6g007100 27.879 330 195 14 32 337 32 342 8.52e-19 87.0
MS.gene43626.t1 MTR_3g463960 28.655 342 187 18 34 337 45 367 1.09e-18 87.0
MS.gene43626.t1 MTR_3g463950 28.655 342 187 18 34 337 45 367 1.09e-18 87.0
MS.gene43626.t1 MTR_3g463970 28.655 342 187 18 34 337 45 367 1.09e-18 87.0
MS.gene43626.t1 MTR_3g463940 28.655 342 187 18 34 337 45 367 1.09e-18 87.0
MS.gene43626.t1 MTR_1g092740 25.625 320 193 14 34 333 39 333 1.83e-18 85.9
MS.gene43626.t1 MTR_1g030268 25.352 355 212 15 32 352 39 374 2.23e-18 86.3
MS.gene43626.t1 MTR_7g033155 25.185 405 206 12 1 337 4 379 1.45e-17 84.0
MS.gene43626.t1 MTR_5g087690 26.667 360 222 15 25 362 40 379 3.50e-17 82.4
MS.gene43626.t1 MTR_7g033165 25.071 351 195 11 32 337 32 359 3.87e-17 82.4
MS.gene43626.t1 MTR_1g030268 27.642 246 145 9 32 259 39 269 1.30e-16 80.5
MS.gene43626.t1 MTR_2g043980 26.558 369 196 18 10 337 6 340 1.39e-16 80.5
MS.gene43626.t1 MTR_2g015590 26.870 361 213 16 3 331 7 348 4.14e-16 79.3
MS.gene43626.t1 MTR_7g111780 25.698 358 220 14 8 338 8 346 7.08e-16 78.6
MS.gene43626.t1 MTR_4g104240 24.695 328 212 12 34 337 40 356 8.19e-16 78.6
MS.gene43626.t1 MTR_2g017935 45.794 107 38 1 177 283 29 115 3.18e-14 68.9
MS.gene43626.t1 MTR_2g015590 27.237 257 161 8 3 250 7 246 4.41e-14 73.2
MS.gene43626.t1 MTR_7g113860 24.490 343 209 11 32 338 28 356 4.89e-14 73.2
MS.gene43626.t1 MTR_7g033165 26.104 249 153 7 32 261 32 268 5.42e-14 72.4
MS.gene43626.t1 MTR_7g113860 23.224 366 231 11 9 338 11 362 2.10e-13 71.2
MS.gene43626.t1 MTR_1g082390 23.669 338 217 13 32 338 30 357 8.02e-13 69.3
MS.gene43626.t1 MTR_1108s0010 28.261 230 131 10 135 347 3 215 3.05e-12 65.9
MS.gene43626.t1 MTR_8g089805 23.704 270 165 10 102 336 36 299 8.05e-11 63.2
MS.gene43626.t1 MTR_8g012540 24.444 315 200 11 9 299 4 304 8.49e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43626.t1 AT1G29670 47.139 367 182 8 1 360 1 362 1.62e-110 328
MS.gene43626.t1 AT1G29670 47.139 367 182 8 1 360 69 430 3.24e-109 327
MS.gene43626.t1 AT1G29660 45.924 368 186 9 1 360 1 363 4.11e-106 317
MS.gene43626.t1 AT5G45670 45.330 364 187 8 4 359 1 360 3.27e-101 304
MS.gene43626.t1 AT4G18970 46.491 342 172 7 27 360 22 360 4.88e-100 301
MS.gene43626.t1 AT4G18970 46.491 342 172 7 27 360 22 360 7.94e-99 300
MS.gene43626.t1 AT1G33811 40.921 369 196 8 4 359 9 368 1.43e-89 275
MS.gene43626.t1 AT2G19010 43.491 338 174 7 8 342 10 333 3.15e-86 265
MS.gene43626.t1 AT2G19010 43.195 338 175 6 8 342 40 363 2.05e-85 264
MS.gene43626.t1 AT2G19050 44.127 315 164 7 30 341 28 333 8.05e-82 254
MS.gene43626.t1 AT1G71691 39.118 340 193 9 27 359 49 381 1.32e-74 236
MS.gene43626.t1 AT4G30140 41.441 333 177 6 30 359 30 347 2.58e-74 234
MS.gene43626.t1 AT5G08460 38.606 373 209 12 1 358 15 382 3.49e-74 235
MS.gene43626.t1 AT2G19060 41.231 325 178 8 21 341 19 334 1.23e-72 230
MS.gene43626.t1 AT2G19050 46.988 249 123 5 30 278 28 267 5.02e-69 219
MS.gene43626.t1 AT5G15720 39.093 353 190 11 26 360 18 363 2.38e-68 219
MS.gene43626.t1 AT1G71250 37.363 364 199 11 13 358 18 370 3.59e-64 209
MS.gene43626.t1 AT1G71691 41.667 252 142 5 27 278 49 295 1.60e-58 192
MS.gene43626.t1 AT3G50400 34.483 377 223 13 4 360 1 373 2.92e-53 181
MS.gene43626.t1 AT5G37690 36.593 317 177 11 35 337 29 335 1.44e-52 178
MS.gene43626.t1 AT3G04290 32.102 352 219 9 14 355 14 355 1.56e-52 179
MS.gene43626.t1 AT5G15720 43.200 250 129 7 26 265 18 264 3.10e-52 176
MS.gene43626.t1 AT1G74460 37.463 339 184 13 16 337 6 333 3.84e-52 177
MS.gene43626.t1 AT1G71691 34.266 286 175 8 81 359 1 280 3.91e-51 172
MS.gene43626.t1 AT2G23540 36.250 320 183 10 35 337 50 365 5.20e-51 175
MS.gene43626.t1 AT5G33370 31.965 341 218 8 28 359 25 360 5.81e-50 172
MS.gene43626.t1 AT5G18430 33.038 339 207 9 11 337 10 340 2.41e-49 170
MS.gene43626.t1 AT4G28780 30.376 372 235 12 1 359 1 361 1.23e-48 168
MS.gene43626.t1 AT2G04570 33.236 343 209 11 15 344 10 345 3.63e-47 164
MS.gene43626.t1 AT4G16230 40.984 244 135 8 13 251 10 249 6.27e-47 160
MS.gene43626.t1 AT5G15720 35.943 281 163 7 93 360 56 332 6.28e-47 163
MS.gene43626.t1 AT5G37690 34.700 317 175 12 35 337 29 327 7.79e-47 163
MS.gene43626.t1 AT4G10950 31.195 343 215 12 31 360 69 403 1.84e-45 161
MS.gene43626.t1 AT5G03820 32.764 351 216 12 1 337 1 345 2.82e-44 157
MS.gene43626.t1 AT5G41890 32.703 370 210 15 14 358 17 372 4.21e-44 157
MS.gene43626.t1 AT5G03820 34.462 325 193 12 27 337 55 373 8.81e-44 156
MS.gene43626.t1 AT4G10950 31.195 343 211 13 31 360 69 399 2.07e-43 155
MS.gene43626.t1 AT2G42990 31.214 346 218 12 4 337 1 338 2.15e-42 151
MS.gene43626.t1 AT4G26790 33.540 322 194 11 29 337 25 339 2.65e-42 151
MS.gene43626.t1 AT4G26790 33.540 322 194 11 29 337 25 339 2.65e-42 151
MS.gene43626.t1 AT5G55050 30.508 354 222 11 23 359 28 374 2.80e-42 152
MS.gene43626.t1 AT1G59406 31.805 349 209 14 5 336 1 337 4.76e-41 148
MS.gene43626.t1 AT1G59030 31.805 349 209 14 5 336 1 337 4.76e-41 148
MS.gene43626.t1 AT1G58725 31.805 349 209 14 5 336 1 337 4.76e-41 148
MS.gene43626.t1 AT3G53100 34.557 327 194 11 24 337 20 339 1.05e-40 147
MS.gene43626.t1 AT5G63170 30.488 328 210 9 9 330 4 319 1.20e-40 147
MS.gene43626.t1 AT5G03810 31.818 352 214 14 1 337 1 341 3.02e-40 146
MS.gene43626.t1 AT5G22810 33.894 357 193 14 8 337 7 347 3.73e-40 145
MS.gene43626.t1 AT3G14820 33.651 315 191 10 26 330 25 331 8.54e-40 144
MS.gene43626.t1 AT5G42170 33.750 320 188 14 31 336 48 357 1.21e-39 145
MS.gene43626.t1 AT1G20135 31.118 331 201 13 11 330 6 320 3.02e-39 142
MS.gene43626.t1 AT1G75890 32.000 325 200 10 32 342 46 363 3.41e-39 143
MS.gene43626.t1 AT1G75890 32.000 325 200 10 32 342 75 392 6.62e-39 143
MS.gene43626.t1 AT2G30220 30.655 336 206 12 16 331 11 339 2.71e-38 141
MS.gene43626.t1 AT1G58430 31.210 314 196 10 32 331 34 341 5.53e-38 140
MS.gene43626.t1 AT1G75880 31.818 352 217 15 3 337 19 364 6.26e-38 140
MS.gene43626.t1 AT1G75880 31.818 352 216 15 3 337 19 363 8.45e-38 140
MS.gene43626.t1 AT1G75890 31.361 338 198 12 32 342 46 376 1.91e-37 139
MS.gene43626.t1 AT5G33370 33.597 253 163 5 28 278 25 274 1.44e-36 135
MS.gene43626.t1 AT2G03980 29.377 337 208 9 22 341 32 355 2.14e-36 136
MS.gene43626.t1 AT2G03980 29.377 337 208 9 22 341 32 355 2.14e-36 136
MS.gene43626.t1 AT2G03980 29.377 337 208 9 22 341 32 355 2.14e-36 136
MS.gene43626.t1 AT2G03980 29.377 337 208 9 22 341 32 355 2.14e-36 136
MS.gene43626.t1 AT3G16370 31.595 326 194 14 31 338 28 342 2.36e-36 135
MS.gene43626.t1 AT2G31540 31.546 317 199 11 28 331 30 341 3.81e-36 135
MS.gene43626.t1 AT1G71120 28.857 350 218 13 29 363 27 360 8.05e-36 134
MS.gene43626.t1 AT2G24560 30.435 345 218 11 3 331 2 340 1.62e-35 133
MS.gene43626.t1 AT1G53920 30.599 317 196 12 26 327 41 348 3.70e-35 133
MS.gene43626.t1 AT1G58520 30.909 330 195 14 21 336 20 330 4.57e-35 132
MS.gene43626.t1 AT1G58525 30.909 330 195 14 21 336 20 330 4.57e-35 132
MS.gene43626.t1 AT1G20130 32.087 321 189 11 31 330 182 494 6.46e-35 134
MS.gene43626.t1 AT1G06990 29.814 322 207 11 29 337 33 348 1.05e-34 131
MS.gene43626.t1 AT1G20130 32.087 321 189 11 31 330 202 514 1.11e-34 134
MS.gene43626.t1 AT2G30310 29.524 315 200 11 32 331 33 340 1.19e-34 131
MS.gene43626.t1 AT3G43570 30.294 340 188 15 8 336 7 308 4.24e-34 129
MS.gene43626.t1 AT1G73610 31.804 327 197 13 13 330 16 325 5.17e-34 129
MS.gene43626.t1 AT2G40250 28.395 324 210 11 31 338 34 351 1.63e-33 128
MS.gene43626.t1 AT3G14225 30.699 329 200 12 28 337 32 351 4.63e-33 127
MS.gene43626.t1 AT5G45950 27.353 340 233 10 11 343 18 350 6.82e-33 126
MS.gene43626.t1 AT3G14225 30.514 331 202 12 28 337 32 355 9.71e-33 126
MS.gene43626.t1 AT5G45960 28.213 319 207 10 28 330 42 354 1.31e-32 126
MS.gene43626.t1 AT5G40990 29.288 379 227 15 7 360 10 372 1.33e-32 126
MS.gene43626.t1 AT1G20132 30.275 327 212 11 32 347 60 381 4.31e-32 124
MS.gene43626.t1 AT1G23500 31.965 341 193 14 13 337 16 333 6.20e-32 123
MS.gene43626.t1 AT1G75900 28.613 346 216 14 13 337 18 353 1.81e-30 120
MS.gene43626.t1 AT3G43550 31.488 289 175 10 8 287 7 281 2.02e-30 118
MS.gene43626.t1 AT1G75920 30.357 336 208 13 6 330 4 324 2.43e-30 119
MS.gene43626.t1 AT1G75910 31.818 330 200 14 13 330 8 324 7.72e-30 117
MS.gene43626.t1 AT1G75930 29.787 329 208 12 13 330 8 324 2.23e-29 116
MS.gene43626.t1 AT2G04020 29.595 321 168 13 32 342 42 314 1.11e-28 114
MS.gene43626.t1 AT2G24560 32.576 264 166 8 6 261 5 264 7.90e-28 112
MS.gene43626.t1 AT1G53990 27.083 384 233 15 9 363 1 366 4.63e-27 110
MS.gene43626.t1 AT1G75920 28.902 346 209 13 9 330 2 334 4.59e-26 107
MS.gene43626.t1 AT1G53940 27.557 352 215 16 33 360 39 374 4.71e-26 108
MS.gene43626.t1 AT1G20120 28.882 322 200 14 32 335 77 387 5.62e-26 108
MS.gene43626.t1 AT1G28570 29.446 343 201 15 23 337 28 357 7.94e-26 107
MS.gene43626.t1 AT2G04020 33.333 225 129 8 32 245 42 256 2.11e-25 103
MS.gene43626.t1 AT2G27360 28.169 355 217 12 4 331 8 351 2.30e-25 106
MS.gene43626.t1 AT5G03610 26.593 361 211 16 1 330 1 338 2.99e-25 105
MS.gene43626.t1 AT1G28610 26.882 372 215 14 1 337 4 353 1.66e-24 103
MS.gene43626.t1 AT1G54020 25.876 371 231 12 3 359 7 347 5.16e-24 102
MS.gene43626.t1 AT1G28580 26.891 357 202 13 18 337 26 360 1.69e-23 101
MS.gene43626.t1 AT1G75920 29.787 282 179 10 58 330 25 296 1.76e-23 99.8
MS.gene43626.t1 AT1G53940 30.522 249 149 11 33 270 39 274 8.01e-23 97.8
MS.gene43626.t1 AT3G09930 26.984 315 193 13 34 330 40 335 2.13e-22 97.4
MS.gene43626.t1 AT3G09930 26.984 315 193 13 34 330 40 335 2.13e-22 97.4
MS.gene43626.t1 AT1G31550 27.019 359 196 15 13 331 20 352 5.10e-22 97.1
MS.gene43626.t1 AT1G31550 26.685 356 198 15 13 331 20 349 1.11e-21 95.9
MS.gene43626.t1 AT4G16220 47.059 119 56 5 1 117 1 114 2.56e-21 92.4
MS.gene43626.t1 AT5G03600 25.937 347 206 14 10 332 20 339 3.53e-21 94.0
MS.gene43626.t1 AT1G54000 24.722 360 239 12 13 359 15 355 7.31e-21 93.6
MS.gene43626.t1 AT1G28590 26.944 360 208 14 13 337 20 359 7.79e-21 93.6
MS.gene43626.t1 AT5G03600 25.857 321 193 13 30 332 11 304 1.28e-20 92.0
MS.gene43626.t1 AT1G28650 26.776 366 218 16 4 331 1 354 2.47e-20 92.0
MS.gene43626.t1 AT5G14450 26.596 376 217 13 1 337 12 367 3.97e-20 91.3
MS.gene43626.t1 AT1G75920 27.545 334 189 13 6 330 4 293 1.04e-19 89.0
MS.gene43626.t1 AT3G14210 25.656 343 218 11 33 359 36 357 1.16e-19 90.1
MS.gene43626.t1 AT3G14220 25.882 340 221 13 32 359 31 351 7.88e-19 87.4
MS.gene43626.t1 AT1G54030 23.418 316 201 10 34 336 53 340 1.42e-18 87.0
MS.gene43626.t1 AT1G54010 23.373 338 228 10 34 359 37 355 1.48e-18 86.7
MS.gene43626.t1 AT3G27950 23.684 380 229 16 4 344 1 358 6.39e-18 84.7
MS.gene43626.t1 AT1G28670 26.099 364 221 17 1 331 5 353 1.68e-17 83.6
MS.gene43626.t1 AT1G67830 25.706 354 210 15 19 336 21 357 5.33e-17 82.0
MS.gene43626.t1 AT3G05180 23.529 340 214 10 32 337 35 362 6.51e-17 82.0
MS.gene43626.t1 AT1G54790 23.077 364 234 12 9 338 8 359 1.26e-16 80.9
MS.gene43626.t1 AT4G01130 24.798 371 227 14 11 344 13 368 1.43e-16 80.9
MS.gene43626.t1 AT1G09390 25.496 353 222 11 11 337 12 349 1.16e-15 78.2
MS.gene43626.t1 AT3G62280 25.501 349 212 14 29 352 32 357 1.95e-15 77.4
MS.gene43626.t1 AT1G54790 23.333 360 230 12 13 338 11 358 4.55e-15 76.3
MS.gene43626.t1 AT1G28610 31.217 189 112 8 1 180 4 183 9.05e-15 73.9
MS.gene43626.t1 AT4G16233 33.582 134 72 6 241 363 5 132 1.24e-14 70.9
MS.gene43626.t1 AT1G54030 23.504 234 150 8 33 261 52 261 2.08e-13 70.9
MS.gene43626.t1 AT1G28600 29.570 186 106 9 1 174 4 176 4.79e-13 68.2
MS.gene43626.t1 AT4G01130 28.750 240 145 10 11 239 13 237 4.82e-13 69.7
MS.gene43626.t1 AT2G31550 27.128 188 124 7 154 331 16 200 5.47e-13 68.2
MS.gene43626.t1 AT3G62280 26.996 263 160 10 29 278 32 275 9.04e-13 68.6
MS.gene43626.t1 AT1G54790 22.798 386 226 13 13 338 11 384 2.27e-12 68.2
MS.gene43626.t1 AT5G45910 25.959 339 207 15 34 338 31 359 7.98e-12 66.6
MS.gene43626.t1 AT3G14210 24.651 215 142 6 159 359 21 229 1.94e-11 64.3

Find 88 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCATTTGCAAACATTAA+TGG 0.145814 2.2:+66614010 MS.gene43626:CDS
TTGATTGCAGCTCAGCTTCT+TGG 0.176755 2.2:+66613971 MS.gene43626:intron
TACGATTCATCTAATCATTC+AGG 0.214296 2.2:+66615062 MS.gene43626:CDS
CACAATCCAACCGAGCTTAT+TGG 0.237913 2.2:-66614939 None:intergenic
ATTGTTTATTAAGATGAATT+TGG 0.259704 2.2:-66614739 None:intergenic
AGAGTTATCATTGAATTTAC+AGG 0.271393 2.2:+66614417 MS.gene43626:CDS
TGTTACTTGTTAGGTAGAAT+TGG 0.307669 2.2:-66614357 None:intergenic
GTTACTTGTTAGGTAGAATT+GGG 0.308314 2.2:-66614356 None:intergenic
GTTACCTGGGTTAGGCCTAT+TGG 0.314894 2.2:+66614581 MS.gene43626:CDS
ATAGGAGGGAATATGTGTTT+TGG 0.340020 2.2:+66614988 MS.gene43626:CDS
TTACCTGGGTTAGGCCTATT+GGG 0.351337 2.2:+66614582 MS.gene43626:CDS
ACAAGAAATCGAGATGGAAT+TGG 0.367083 2.2:+66615121 MS.gene43626:CDS
AACTATGCATCTGGCGGAGC+TGG 0.371338 2.2:+66614055 MS.gene43626:CDS
TAAGGATTGTAATTTGATCT+TGG 0.373431 2.2:-66613770 None:intergenic
GGCTGTAAGTGTTACTTGTT+AGG 0.382777 2.2:-66614366 None:intergenic
TAACAGGCTTTACATGATCT+TGG 0.383167 2.2:+66614543 MS.gene43626:intron
TCGACCGTTGGTAAATCTTC+CGG 0.391397 2.2:-66613819 None:intergenic
CAGGGTTATGCTATTAGCTT+GGG 0.392256 2.2:+66614190 MS.gene43626:intron
GACTTTCCGATGGGCCCAAC+CGG 0.403750 2.2:+66613800 MS.gene43626:CDS
AAACACATATTCCCTCCTAT+TGG 0.405109 2.2:-66614985 None:intergenic
ATCCTTACTCATGAGACATA+TGG 0.416628 2.2:+66614621 MS.gene43626:CDS
GATCAAATTACAATCCTTAC+GGG 0.423913 2.2:+66613774 MS.gene43626:CDS
CTTACAAACAAGATAAGAAT+AGG 0.427206 2.2:-66613641 None:intergenic
AGAGATTCTGCATACTGCTC+AGG 0.428339 2.2:-66614388 None:intergenic
AGGTATTCAAAAGCTTTGTC+AGG 0.428848 2.2:-66614271 None:intergenic
TTTGGAGATTCTTTATCTGA+TGG 0.449945 2.2:+66613716 MS.gene43626:CDS
AGATCAAATTACAATCCTTA+CGG 0.450350 2.2:+66613773 MS.gene43626:CDS
ACAGGGTTATGCTATTAGCT+TGG 0.451725 2.2:+66614189 MS.gene43626:intron
CGTTGGTAAATCTTCCGGTT+GGG 0.464773 2.2:-66613814 None:intergenic
ATGAAAGGCCATGCTCCAAT+AGG 0.466399 2.2:+66614970 MS.gene43626:CDS
ACCCATATGTCTCATGAGTA+AGG 0.468364 2.2:-66614623 None:intergenic
CAGTCCATCCCGGCGAGGCT+TGG 0.480459 2.2:+66615015 MS.gene43626:CDS
TCTCAAATTGCTAGCAGACT+TGG 0.481756 2.2:+66614244 MS.gene43626:CDS
CATAATACAAGCATTTGTTA+AGG 0.485419 2.2:-66614291 None:intergenic
ACAAGGTGCTTAATATCCAT+TGG 0.485696 2.2:-66615095 None:intergenic
GTCAATTGTAGTTCGACCGT+TGG 0.487738 2.2:-66613831 None:intergenic
TCCTTACTCATGAGACATAT+GGG 0.490931 2.2:+66614622 MS.gene43626:CDS
AAAGGTGTGAACTATGCATC+TGG 0.495068 2.2:+66614046 MS.gene43626:CDS
TCAACTGCCGAGCATTCATA+TGG 0.495949 2.2:+66614771 MS.gene43626:CDS
AAATATGTGTTACCTGGGTT+AGG 0.497677 2.2:+66614573 MS.gene43626:CDS
TGTTGTCCAATAAGCTCGGT+TGG 0.500248 2.2:+66614933 MS.gene43626:CDS
TTTGATCTTGGAGAGTTAGC+AGG 0.500662 2.2:-66613758 None:intergenic
CACTTGGAGTGCATCCCAAT+AGG 0.506715 2.2:-66614596 None:intergenic
ACGATTCATCTAATCATTCA+GGG 0.515961 2.2:+66615063 MS.gene43626:CDS
TCCTTGTTGTCCAATAAGCT+CGG 0.516114 2.2:+66614929 MS.gene43626:CDS
GGTTCCAAGCCTCGCCGGGA+TGG 0.517773 2.2:-66615019 None:intergenic
TGCTTGTATTATGTGCATAT+AGG 0.519757 2.2:+66614301 MS.gene43626:CDS
GAACCATTAATGTTTGCAAA+TGG 0.520949 2.2:-66614013 None:intergenic
ATCGGAAAGTCGATCCCGTA+AGG 0.525144 2.2:-66613788 None:intergenic
TTCAGGGTTCGCTTATCCAA+TGG 0.529308 2.2:+66615079 MS.gene43626:CDS
CCATTAATGTTTGCAAATGG+TGG 0.530450 2.2:-66614010 None:intergenic
GCAAGAAAATATGTGTTACC+TGG 0.530877 2.2:+66614567 MS.gene43626:CDS
AGTAGGTTCCAAGCCTCGCC+GGG 0.532908 2.2:-66615023 None:intergenic
AATCTTCCGGTTGGGCCCAT+CGG 0.538489 2.2:-66613806 None:intergenic
ATTATTACCATATGAATGCT+CGG 0.539271 2.2:-66614778 None:intergenic
CCGTTGGTAAATCTTCCGGT+TGG 0.540057 2.2:-66613815 None:intergenic
TACGGGATCGACTTTCCGAT+GGG 0.541662 2.2:+66613791 MS.gene43626:CDS
TGGCGGAGCTGGAATTCGTA+TGG 0.548898 2.2:+66614066 MS.gene43626:CDS
AATTCGTATGGAGACATACT+CGG 0.551650 2.2:+66614078 MS.gene43626:CDS
TATTTGCAACAATGTGTCAA+TGG 0.553346 2.2:+66613665 MS.gene43626:CDS
AAAGGCCATGCTCCAATAGG+AGG 0.561115 2.2:+66614973 MS.gene43626:CDS
AGATGAATCGTACGATGTTG+TGG 0.562928 2.2:-66615051 None:intergenic
GAGTAGGTTCCAAGCCTCGC+CGG 0.564674 2.2:-66615024 None:intergenic
TATGGAGACATACTCGGCTA+AGG 0.568672 2.2:+66614084 MS.gene43626:CDS
TTACGGGATCGACTTTCCGA+TGG 0.570577 2.2:+66613790 MS.gene43626:CDS
GGAGATTCTTTATCTGATGG+TGG 0.571261 2.2:+66613719 MS.gene43626:CDS
CAAGAAAATATGTGTTACCT+GGG 0.577135 2.2:+66614568 MS.gene43626:CDS
TCATGAGTAAGGATGGCACT+TGG 0.585430 2.2:-66614612 None:intergenic
ATATGTCTCATGAGTAAGGA+TGG 0.596046 2.2:-66614619 None:intergenic
GAGATTCTGCATACTGCTCA+GGG 0.602712 2.2:-66614387 None:intergenic
GATTGTGTATTCGTGATGAA+AGG 0.604626 2.2:+66614955 MS.gene43626:CDS
TTACTTGTTAGGTAGAATTG+GGG 0.608022 2.2:-66614355 None:intergenic
TATTCCCTCCTATTGGAGCA+TGG 0.619481 2.2:-66614978 None:intergenic
ACGATGTTGTGGCAATGAGT+AGG 0.619695 2.2:-66615040 None:intergenic
TTCTATGATAAAGACATGGT+TGG 0.621014 2.2:+66613613 MS.gene43626:CDS
TGTTGAACAAGAAATCGAGA+TGG 0.622740 2.2:+66615115 MS.gene43626:CDS
TCTCGATTTCTTGTTCAACA+AGG 0.622988 2.2:-66615112 None:intergenic
ACTTGAACATATTTAAGCAG+AGG 0.627899 2.2:-66615165 None:intergenic
GACATATGGGTCTTGTGTTG+AGG 0.634040 2.2:+66614635 MS.gene43626:CDS
GGATGCAGTCCATCCCGGCG+AGG 0.639170 2.2:+66615010 MS.gene43626:CDS
AATGGTTCAGACATACTCAA+AGG 0.644324 2.2:+66614028 MS.gene43626:CDS
AAGGCCATGCTCCAATAGGA+GGG 0.650431 2.2:+66614974 MS.gene43626:CDS
ACCGAGCTTATTGGACAACA+AGG 0.654970 2.2:-66614930 None:intergenic
ATCTTGGAGAGTTAGCAGGA+AGG 0.658959 2.2:-66613754 None:intergenic
GGTGTGAACTATGCATCTGG+CGG 0.691974 2.2:+66614049 MS.gene43626:CDS
CATCCCAATAGGCCTAACCC+AGG 0.697491 2.2:-66614585 None:intergenic
TGGATTCTATGATAAAGACA+TGG 0.717804 2.2:+66613609 MS.gene43626:CDS
CCAACCGGAAGATTTACCAA+CGG 0.762608 2.2:+66613815 MS.gene43626:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTTTATTAAGATGAATT+TGG - chr2.2:66614742-66614761 None:intergenic 15.0%
!! ACACTTAATGTTTCATAATA+TGG - chr2.2:66613884-66613903 None:intergenic 20.0%
!! TACAATAGTTATGAATATGA+TGG + chr2.2:66614494-66614513 MS.gene43626:intron 20.0%
!! TTTAAGCTTGAAATCAAAAA+TGG - chr2.2:66614679-66614698 None:intergenic 20.0%
! AAATAACATTATGTCCATAC+AGG + chr2.2:66614171-66614190 MS.gene43626:intron 25.0%
! AATAACATTATGTCCATACA+GGG + chr2.2:66614172-66614191 MS.gene43626:intron 25.0%
! AGAGTTATCATTGAATTTAC+AGG + chr2.2:66614417-66614436 MS.gene43626:CDS 25.0%
! AGATCAAATTACAATCCTTA+CGG + chr2.2:66613773-66613792 MS.gene43626:CDS 25.0%
! ATTATTACCATATGAATGCT+CGG - chr2.2:66614781-66614800 None:intergenic 25.0%
! CTTACAAACAAGATAAGAAT+AGG - chr2.2:66613644-66613663 None:intergenic 25.0%
! TAAGCTGAATCAAAAGTTTA+AGG - chr2.2:66613932-66613951 None:intergenic 25.0%
! TAAGGATTGTAATTTGATCT+TGG - chr2.2:66613773-66613792 None:intergenic 25.0%
!! CATAATACAAGCATTTGTTA+AGG - chr2.2:66614294-66614313 None:intergenic 25.0%
!!! TGGACATAATGTTATTTTTG+CGG - chr2.2:66614168-66614187 None:intergenic 25.0%
!!! TGGTTTATAATAGAAGCATT+TGG + chr2.2:66614514-66614533 MS.gene43626:intron 25.0%
AAGCATTTGGTATATGTAAC+AGG + chr2.2:66614527-66614546 MS.gene43626:intron 30.0%
ACGATTCATCTAATCATTCA+GGG + chr2.2:66615063-66615082 MS.gene43626:CDS 30.0%
CAAGAAAATATGTGTTACCT+GGG + chr2.2:66614568-66614587 MS.gene43626:CDS 30.0%
GAACCATTAATGTTTGCAAA+TGG - chr2.2:66614016-66614035 None:intergenic 30.0%
GATCAAATTACAATCCTTAC+GGG + chr2.2:66613774-66613793 MS.gene43626:CDS 30.0%
TACGATTCATCTAATCATTC+AGG + chr2.2:66615062-66615081 MS.gene43626:CDS 30.0%
TATTTGCAACAATGTGTCAA+TGG + chr2.2:66613665-66613684 MS.gene43626:CDS 30.0%
TCTCCAAAGATAAAAAGACA+AGG - chr2.2:66613704-66613723 None:intergenic 30.0%
TGCTTGTATTATGTGCATAT+AGG + chr2.2:66614301-66614320 MS.gene43626:CDS 30.0%
TGGATTCTATGATAAAGACA+TGG + chr2.2:66613609-66613628 MS.gene43626:CDS 30.0%
TTCTATGATAAAGACATGGT+TGG + chr2.2:66613613-66613632 MS.gene43626:CDS 30.0%
TTTGGAGATTCTTTATCTGA+TGG + chr2.2:66613716-66613735 MS.gene43626:CDS 30.0%
! GTTACTTGTTAGGTAGAATT+GGG - chr2.2:66614359-66614378 None:intergenic 30.0%
! TCAATGAATCTCAGGTTTTT+CGG + chr2.2:66614896-66614915 MS.gene43626:intron 30.0%
! TGTTACTTGTTAGGTAGAAT+TGG - chr2.2:66614360-66614379 None:intergenic 30.0%
! TTACTTGTTAGGTAGAATTG+GGG - chr2.2:66614358-66614377 None:intergenic 30.0%
AAACACATATTCCCTCCTAT+TGG - chr2.2:66614988-66615007 None:intergenic 35.0%
AAATATGTGTTACCTGGGTT+AGG + chr2.2:66614573-66614592 MS.gene43626:CDS 35.0%
AATGGTTCAGACATACTCAA+AGG + chr2.2:66614028-66614047 MS.gene43626:CDS 35.0%
AATTCGTATGGAGACATACT+CGG + chr2.2:66614078-66614097 MS.gene43626:CDS 35.0%
ACAAGAAATCGAGATGGAAT+TGG + chr2.2:66615121-66615140 MS.gene43626:CDS 35.0%
AGTGAAACACAAAGTTCAAG+TGG - chr2.2:66614446-66614465 None:intergenic 35.0%
ATATGTCTCATGAGTAAGGA+TGG - chr2.2:66614622-66614641 None:intergenic 35.0%
ATCCTTACTCATGAGACATA+TGG + chr2.2:66614621-66614640 MS.gene43626:CDS 35.0%
CAGTTTAATGTGATTGATCG+AGG + chr2.2:66614844-66614863 MS.gene43626:intron 35.0%
CCACCATTTGCAAACATTAA+TGG + chr2.2:66614010-66614029 MS.gene43626:CDS 35.0%
CCATTAATGTTTGCAAATGG+TGG - chr2.2:66614013-66614032 None:intergenic 35.0%
GATTGTGTATTCGTGATGAA+AGG + chr2.2:66614955-66614974 MS.gene43626:CDS 35.0%
GCAAGAAAATATGTGTTACC+TGG + chr2.2:66614567-66614586 MS.gene43626:CDS 35.0%
TAACAGGCTTTACATGATCT+TGG + chr2.2:66614543-66614562 MS.gene43626:intron 35.0%
TCCTTACTCATGAGACATAT+GGG + chr2.2:66614622-66614641 MS.gene43626:CDS 35.0%
TCTCGATTTCTTGTTCAACA+AGG - chr2.2:66615115-66615134 None:intergenic 35.0%
TGTTGAACAAGAAATCGAGA+TGG + chr2.2:66615115-66615134 MS.gene43626:CDS 35.0%
! ACAAGGTGCTTAATATCCAT+TGG - chr2.2:66615098-66615117 None:intergenic 35.0%
! AGATAAAAAGACAAGGCACT+TGG - chr2.2:66613697-66613716 None:intergenic 35.0%
! AGGTATTCAAAAGCTTTGTC+AGG - chr2.2:66614274-66614293 None:intergenic 35.0%
! ATAGGAGGGAATATGTGTTT+TGG + chr2.2:66614988-66615007 MS.gene43626:CDS 35.0%
! GATAAAAAGACAAGGCACTT+GGG - chr2.2:66613696-66613715 None:intergenic 35.0%
! GTGCCTTGTCTTTTTATCTT+TGG + chr2.2:66613698-66613717 MS.gene43626:CDS 35.0%
! TAGGAGGGAATATGTGTTTT+GGG + chr2.2:66614989-66615008 MS.gene43626:CDS 35.0%
ACAGGGTTATGCTATTAGCT+TGG + chr2.2:66614189-66614208 MS.gene43626:intron 40.0%
ACCCATATGTCTCATGAGTA+AGG - chr2.2:66614626-66614645 None:intergenic 40.0%
AGATGAATCGTACGATGTTG+TGG - chr2.2:66615054-66615073 None:intergenic 40.0%
CTGCATGTTCAATGAATCTC+AGG + chr2.2:66614888-66614907 MS.gene43626:intron 40.0%
GCTAATAGCATAACCCTGTA+TGG - chr2.2:66614188-66614207 None:intergenic 40.0%
GGAGATTCTTTATCTGATGG+TGG + chr2.2:66613719-66613738 MS.gene43626:CDS 40.0%
TCTCAAATTGCTAGCAGACT+TGG + chr2.2:66614244-66614263 MS.gene43626:CDS 40.0%
TTTGATCTTGGAGAGTTAGC+AGG - chr2.2:66613761-66613780 None:intergenic 40.0%
! AAAGGTGTGAACTATGCATC+TGG + chr2.2:66614046-66614065 MS.gene43626:CDS 40.0%
! CAGGGTTATGCTATTAGCTT+GGG + chr2.2:66614190-66614209 MS.gene43626:intron 40.0%
! TCCTTGTTGTCCAATAAGCT+CGG + chr2.2:66614929-66614948 MS.gene43626:CDS 40.0%
!! CTCAGGTTTTTCGGTTTCAA+TGG + chr2.2:66614905-66614924 MS.gene43626:intron 40.0%
!! GGCTGTAAGTGTTACTTGTT+AGG - chr2.2:66614369-66614388 None:intergenic 40.0%
ACCGAGCTTATTGGACAACA+AGG - chr2.2:66614933-66614952 None:intergenic 45.0%
ACGATGTTGTGGCAATGAGT+AGG - chr2.2:66615043-66615062 None:intergenic 45.0%
AGAGATTCTGCATACTGCTC+AGG - chr2.2:66614391-66614410 None:intergenic 45.0%
ATCTTGGAGAGTTAGCAGGA+AGG - chr2.2:66613757-66613776 None:intergenic 45.0%
ATGAAAGGCCATGCTCCAAT+AGG + chr2.2:66614970-66614989 MS.gene43626:CDS 45.0%
CACAATCCAACCGAGCTTAT+TGG - chr2.2:66614942-66614961 None:intergenic 45.0%
CCAACCGGAAGATTTACCAA+CGG + chr2.2:66613815-66613834 MS.gene43626:CDS 45.0%
GAGATTCTGCATACTGCTCA+GGG - chr2.2:66614390-66614409 None:intergenic 45.0%
GTCAATTGTAGTTCGACCGT+TGG - chr2.2:66613834-66613853 None:intergenic 45.0%
TATGGAGACATACTCGGCTA+AGG + chr2.2:66614084-66614103 MS.gene43626:CDS 45.0%
TATTCCCTCCTATTGGAGCA+TGG - chr2.2:66614981-66615000 None:intergenic 45.0%
TCAACTGCCGAGCATTCATA+TGG + chr2.2:66614771-66614790 MS.gene43626:CDS 45.0%
TCATGAGTAAGGATGGCACT+TGG - chr2.2:66614615-66614634 None:intergenic 45.0%
TGTTGTCCAATAAGCTCGGT+TGG + chr2.2:66614933-66614952 MS.gene43626:CDS 45.0%
TTCAGGGTTCGCTTATCCAA+TGG + chr2.2:66615079-66615098 MS.gene43626:CDS 45.0%
TTGATTGCAGCTCAGCTTCT+TGG + chr2.2:66613971-66613990 MS.gene43626:intron 45.0%
! CGTTGGTAAATCTTCCGGTT+GGG - chr2.2:66613817-66613836 None:intergenic 45.0%
! GACATATGGGTCTTGTGTTG+AGG + chr2.2:66614635-66614654 MS.gene43626:CDS 45.0%
! TCGACCGTTGGTAAATCTTC+CGG - chr2.2:66613822-66613841 None:intergenic 45.0%
! TTACCTGGGTTAGGCCTATT+GGG + chr2.2:66614582-66614601 MS.gene43626:CDS 45.0%
AAAGGCCATGCTCCAATAGG+AGG + chr2.2:66614973-66614992 MS.gene43626:CDS 50.0%
AAGGCCATGCTCCAATAGGA+GGG + chr2.2:66614974-66614993 MS.gene43626:CDS 50.0%
ATCGGAAAGTCGATCCCGTA+AGG - chr2.2:66613791-66613810 None:intergenic 50.0%
CACTTGGAGTGCATCCCAAT+AGG - chr2.2:66614599-66614618 None:intergenic 50.0%
GGTGTGAACTATGCATCTGG+CGG + chr2.2:66614049-66614068 MS.gene43626:CDS 50.0%
! CCGTTGGTAAATCTTCCGGT+TGG - chr2.2:66613818-66613837 None:intergenic 50.0%
! GTTACCTGGGTTAGGCCTAT+TGG + chr2.2:66614581-66614600 MS.gene43626:CDS 50.0%
! TACGGGATCGACTTTCCGAT+GGG + chr2.2:66613791-66613810 MS.gene43626:CDS 50.0%
! TTACGGGATCGACTTTCCGA+TGG + chr2.2:66613790-66613809 MS.gene43626:CDS 50.0%
!!! TTTTGGGATGCAGTCCATCC+CGG + chr2.2:66615005-66615024 MS.gene43626:CDS 50.0%
AACTATGCATCTGGCGGAGC+TGG + chr2.2:66614055-66614074 MS.gene43626:CDS 55.0%
AATCTTCCGGTTGGGCCCAT+CGG - chr2.2:66613809-66613828 None:intergenic 55.0%
CATCCCAATAGGCCTAACCC+AGG - chr2.2:66614588-66614607 None:intergenic 55.0%
TGGCGGAGCTGGAATTCGTA+TGG + chr2.2:66614066-66614085 MS.gene43626:CDS 55.0%
AGTAGGTTCCAAGCCTCGCC+GGG - chr2.2:66615026-66615045 None:intergenic 60.0%
GACTTTCCGATGGGCCCAAC+CGG + chr2.2:66613800-66613819 MS.gene43626:CDS 60.0%
GAGTAGGTTCCAAGCCTCGC+CGG - chr2.2:66615027-66615046 None:intergenic 60.0%
CAGTCCATCCCGGCGAGGCT+TGG + chr2.2:66615015-66615034 MS.gene43626:CDS 70.0%
GGATGCAGTCCATCCCGGCG+AGG + chr2.2:66615010-66615029 MS.gene43626:CDS 70.0%
GGTTCCAAGCCTCGCCGGGA+TGG - chr2.2:66615022-66615041 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 66613608 66615175 66613608 ID=MS.gene43626
chr2.2 mRNA 66613608 66615175 66613608 ID=MS.gene43626.t1;Parent=MS.gene43626
chr2.2 exon 66613608 66613860 66613608 ID=MS.gene43626.t1.exon1;Parent=MS.gene43626.t1
chr2.2 CDS 66613608 66613860 66613608 ID=cds.MS.gene43626.t1;Parent=MS.gene43626.t1
chr2.2 exon 66613981 66614105 66613981 ID=MS.gene43626.t1.exon2;Parent=MS.gene43626.t1
chr2.2 CDS 66613981 66614105 66613981 ID=cds.MS.gene43626.t1;Parent=MS.gene43626.t1
chr2.2 exon 66614193 66614438 66614193 ID=MS.gene43626.t1.exon3;Parent=MS.gene43626.t1
chr2.2 CDS 66614193 66614438 66614193 ID=cds.MS.gene43626.t1;Parent=MS.gene43626.t1
chr2.2 exon 66614549 66614792 66614549 ID=MS.gene43626.t1.exon4;Parent=MS.gene43626.t1
chr2.2 CDS 66614549 66614792 66614549 ID=cds.MS.gene43626.t1;Parent=MS.gene43626.t1
chr2.2 exon 66614910 66615175 66614910 ID=MS.gene43626.t1.exon5;Parent=MS.gene43626.t1
chr2.2 CDS 66614910 66615175 66614910 ID=cds.MS.gene43626.t1;Parent=MS.gene43626.t1
Gene Sequence

>MS.gene43626

ATGGATTCTATGATAAAGACATGGTTGGTGTTGCCTATTCTTATCTTGTTTGTAAGCTATTTGCAACAATGTGTCAATGGAAAATCCCAAGTGCCTTGTCTTTTTATCTTTGGAGATTCTTTATCTGATGGTGGAAACAACAACAACCTTCCTGCTAACTCTCCAAGATCAAATTACAATCCTTACGGGATCGACTTTCCGATGGGCCCAACCGGAAGATTTACCAACGGTCGAACTACAATTGACATAATAAGTAACATTCTTTTAACTTATCCATATTATGAAACATTAAGTGTTTTTCTTTGTTCTTTTCTCTTGTTACCTTAAACTTTTGATTCAGCTTAAACAAACTATGAACTTCTTTTGATTGCAGCTCAGCTTCTTGGTTTTGAGAACTTCATTCCACCATTTGCAAACATTAATGGTTCAGACATACTCAAAGGTGTGAACTATGCATCTGGCGGAGCTGGAATTCGTATGGAGACATACTCGGCTAAGGTTTAAATTAGTTTTTAGTAGATGATTAGAGTATTTTTGTTACATTACTCATACACATGCCGCAAAAATAACATTATGTCCATACAGGGTTATGCTATTAGCTTGGGATTGCAGTTAAGAAATCACAGAGTTATAGTTTCTCAAATTGCTAGCAGACTTGGACGTCCTGACAAAGCTTTTGAATACCTTAACAAATGCTTGTATTATGTGCATATAGGCAGTAATGATTACATAAATAATTACTTTCTTCCCCAATTCTACCTAACAAGTAACACTTACAGCCCTGAGCAGTATGCAGAATCTCTAATTGAAGAGTTATCATTGAATTTACAGGTATCCACTTGAACTTTGTGTTTCACTTTTGTTTTCACTAAATGACTTTGATAATTACAATAGTTATGAATATGATGGTTTATAATAGAAGCATTTGGTATATGTAACAGGCTTTACATGATCTTGGAGCAAGAAAATATGTGTTACCTGGGTTAGGCCTATTGGGATGCACTCCAAGTGCCATCCTTACTCATGAGACATATGGGTCTTGTGTTGAGGAGCAAAATGACATTGCATCCATTTTTGATTTCAAGCTTAAATCTTTAGTAGATCACTTCAATAATAAGTTCTCTGCTGATTCCAAATTCATCTTAATAAACAATACATTACAGTCAACTGCCGAGCATTCATATGGTAATAATTTTAGTTTACTTCAATTTTCAATTTACATACTATAATTAACTACAGTTTAATGTGATTGATCGAGGTTTATACAATATATAATCAAGCTGCATGTTCAATGAATCTCAGGTTTTTCGGTTTCAATGGCTCCTTGTTGTCCAATAAGCTCGGTTGGATTGTGTATTCGTGATGAAAGGCCATGCTCCAATAGGAGGGAATATGTGTTTTGGGATGCAGTCCATCCCGGCGAGGCTTGGAACCTACTCATTGCCACAACATCGTACGATTCATCTAATCATTCAGGGTTCGCTTATCCAATGGATATTAAGCACCTTGTTGAACAAGAAATCGAGATGGAATTGGATTTCACTTCACAGCTTAGTGCCTCTGCTTAA

Protein sequence

>MS.gene43626.t1

MDSMIKTWLVLPILILFVSYLQQCVNGKSQVPCLFIFGDSLSDGGNNNNLPANSPRSNYNPYGIDFPMGPTGRFTNGRTTIDIITQLLGFENFIPPFANINGSDILKGVNYASGGAGIRMETYSAKGYAISLGLQLRNHRVIVSQIASRLGRPDKAFEYLNKCLYYVHIGSNDYINNYFLPQFYLTSNTYSPEQYAESLIEELSLNLQALHDLGARKYVLPGLGLLGCTPSAILTHETYGSCVEEQNDIASIFDFKLKSLVDHFNNKFSADSKFILINNTLQSTAEHSYGFSVSMAPCCPISSVGLCIRDERPCSNRREYVFWDAVHPGEAWNLLIATTSYDSSNHSGFAYPMDIKHLVEQEIEMELDFTSQLSASA