Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55937.t1 | XP_003594656.2 | 93.5 | 417 | 15 | 2 | 1 | 416 | 1 | 406 | 7.40E-211 | 743 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55937.t1 | P29344 | 73.7 | 419 | 93 | 4 | 3 | 415 | 1 | 408 | 3.6e-166 | 585.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55937.t1 | G7IL22 | 93.5 | 417 | 15 | 2 | 1 | 416 | 1 | 406 | 5.3e-211 | 743.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene55937 | 0.820316 | 7.32E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene55937 | 0.827931 | 1.19E-54 | -1.69E-46 |
| MS.gene049284 | MS.gene55937 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene55937 | 0.815138 | 1.08E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene55937 | 0.893431 | 6.33E-75 | -1.69E-46 |
| MS.gene049491 | MS.gene55937 | 0.856485 | 3.12E-62 | -1.69E-46 |
| MS.gene049614 | MS.gene55937 | 0.841624 | 4.24E-58 | -1.69E-46 |
| MS.gene049661 | MS.gene55937 | 0.830021 | 3.71E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene55937 | 0.819254 | 1.28E-52 | -1.69E-46 |
| MS.gene049760 | MS.gene55937 | 0.839002 | 2.06E-57 | -1.69E-46 |
| MS.gene049805 | MS.gene55937 | 0.841639 | 4.21E-58 | -1.69E-46 |
| MS.gene050076 | MS.gene55937 | 0.88651 | 3.21E-72 | -1.69E-46 |
| MS.gene050163 | MS.gene55937 | 0.851123 | 1.09E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene55937 | 0.830603 | 2.68E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene55937 | 0.83896 | 2.11E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene55937 | 0.808744 | 2.66E-50 | -1.69E-46 |
| MS.gene050404 | MS.gene55937 | 0.812848 | 3.45E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene55937 | 0.866989 | 1.90E-65 | -1.69E-46 |
| MS.gene050529 | MS.gene55937 | 0.821777 | 3.37E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene55937 | 0.893383 | 6.62E-75 | -1.69E-46 |
| MS.gene050770 | MS.gene55937 | 0.894609 | 2.10E-75 | -1.69E-46 |
| MS.gene050783 | MS.gene55937 | 0.834491 | 2.91E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene55937 | 0.836582 | 8.60E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene55937 | 0.825733 | 3.99E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene55937 | 0.878241 | 3.29E-69 | -1.69E-46 |
| MS.gene051228 | MS.gene55937 | 0.87359 | 1.31E-67 | -1.69E-46 |
| MS.gene051471 | MS.gene55937 | 0.873319 | 1.61E-67 | -1.69E-46 |
| MS.gene051666 | MS.gene55937 | 0.852385 | 4.78E-61 | -1.69E-46 |
| MS.gene051692 | MS.gene55937 | 0.80513 | 1.55E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene55937 | 0.826777 | 2.25E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene55937 | 0.872895 | 2.24E-67 | -1.69E-46 |
| MS.gene052178 | MS.gene55937 | 0.801442 | 8.99E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene55937 | 0.8285 | 8.69E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene55937 | 0.839862 | 1.23E-57 | -1.69E-46 |
| MS.gene052290 | MS.gene55937 | 0.887375 | 1.51E-72 | -1.69E-46 |
| MS.gene052293 | MS.gene55937 | 0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene55937 | 0.858119 | 1.03E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene55937 | 0.813589 | 2.37E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene55937 | 0.868891 | 4.66E-66 | -1.69E-46 |
| MS.gene052340 | MS.gene55937 | 0.803118 | 4.06E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene55937 | 0.86489 | 8.78E-65 | -1.69E-46 |
| MS.gene052484 | MS.gene55937 | 0.829041 | 6.42E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene55937 | 0.801396 | 9.18E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene55937 | 0.857354 | 1.73E-62 | -1.69E-46 |
| MS.gene053103 | MS.gene55937 | 0.857969 | 1.14E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene55937 | 0.853257 | 2.69E-61 | -1.69E-46 |
| MS.gene053107 | MS.gene55937 | 0.821802 | 3.33E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene55937 | 0.811568 | 6.56E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene55937 | 0.819614 | 1.06E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene55937 | 0.897146 | 1.86E-76 | -1.69E-46 |
| MS.gene053384 | MS.gene55937 | 0.817852 | 2.66E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene55937 | 0.800627 | 1.32E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene55937 | 0.842541 | 2.43E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene55937 | 0.869256 | 3.55E-66 | -1.69E-46 |
| MS.gene054376 | MS.gene55937 | 0.894703 | 1.92E-75 | -1.69E-46 |
| MS.gene05455 | MS.gene55937 | 0.808114 | 3.63E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene55937 | 0.833271 | 5.87E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene55937 | 0.884032 | 2.71E-71 | -1.69E-46 |
| MS.gene054803 | MS.gene55937 | 0.881212 | 2.90E-70 | -1.69E-46 |
| MS.gene054804 | MS.gene55937 | 0.888234 | 7.07E-73 | -1.69E-46 |
| MS.gene054955 | MS.gene55937 | 0.819647 | 1.04E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene55937 | 0.891352 | 4.29E-74 | -1.69E-46 |
| MS.gene055277 | MS.gene55937 | 0.847008 | 1.52E-59 | -1.69E-46 |
| MS.gene055390 | MS.gene55937 | 0.832029 | 1.19E-55 | -1.69E-46 |
| MS.gene055397 | MS.gene55937 | 0.925344 | 2.08E-90 | -1.69E-46 |
| MS.gene055412 | MS.gene55937 | 0.857814 | 1.26E-62 | -1.69E-46 |
| MS.gene055422 | MS.gene55937 | 0.838523 | 2.73E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene55937 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene55937 | 0.900601 | 6.22E-78 | -1.69E-46 |
| MS.gene055533 | MS.gene55937 | 0.802679 | 5.00E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene55937 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene55937 | 0.842657 | 2.26E-58 | -1.69E-46 |
| MS.gene055896 | MS.gene55937 | 0.882909 | 7.01E-71 | -1.69E-46 |
| MS.gene05592 | MS.gene55937 | 0.844729 | 6.31E-59 | -1.69E-46 |
| MS.gene056083 | MS.gene55937 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene55937 | 0.823303 | 1.49E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene55937 | 0.817298 | 3.55E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene55937 | 0.810374 | 1.19E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene55937 | 0.903599 | 2.94E-79 | -1.69E-46 |
| MS.gene056612 | MS.gene55937 | 0.821113 | 4.80E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene55937 | 0.823362 | 1.44E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene55937 | 0.835802 | 1.36E-56 | -1.69E-46 |
| MS.gene056903 | MS.gene55937 | 0.801916 | 7.18E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene55937 | 0.864413 | 1.24E-64 | -1.69E-46 |
| MS.gene05702 | MS.gene55937 | 0.821682 | 3.55E-53 | -1.69E-46 |
| MS.gene057123 | MS.gene55937 | 0.843211 | 1.61E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene55937 | 0.905978 | 2.42E-80 | -1.69E-46 |
| MS.gene057146 | MS.gene55937 | 0.830309 | 3.16E-55 | -1.69E-46 |
| MS.gene057246 | MS.gene55937 | 0.865694 | 4.90E-65 | -1.69E-46 |
| MS.gene057295 | MS.gene55937 | 0.893939 | 3.94E-75 | -1.69E-46 |
| MS.gene05735 | MS.gene55937 | 0.835549 | 1.57E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene55937 | 0.836722 | 7.92E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene55937 | 0.802582 | 5.24E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene55937 | 0.805454 | 1.32E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene55937 | 0.841309 | 5.14E-58 | -1.69E-46 |
| MS.gene058082 | MS.gene55937 | 0.856392 | 3.32E-62 | -1.69E-46 |
| MS.gene058233 | MS.gene55937 | 0.830018 | 3.72E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene55937 | 0.8925 | 1.50E-74 | -1.69E-46 |
| MS.gene058323 | MS.gene55937 | 0.804319 | 2.29E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene55937 | 0.834091 | 3.66E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene55937 | 0.895221 | 1.18E-75 | -1.69E-46 |
| MS.gene058723 | MS.gene55937 | 0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene058748 | MS.gene55937 | 0.818452 | 1.95E-52 | -1.69E-46 |
| MS.gene058787 | MS.gene55937 | 0.81342 | 2.58E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene55937 | 0.804882 | 1.75E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene55937 | 0.823059 | 1.70E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene55937 | 0.82088 | 5.43E-53 | -1.69E-46 |
| MS.gene059326 | MS.gene55937 | 0.842761 | 2.12E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene55937 | 0.812359 | 4.41E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene55937 | 0.865769 | 4.64E-65 | -1.69E-46 |
| MS.gene059597 | MS.gene55937 | 0.859571 | 3.77E-63 | -1.69E-46 |
| MS.gene05959 | MS.gene55937 | 0.834192 | 3.45E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene55937 | 0.863592 | 2.23E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene55937 | 0.842695 | 2.21E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene55937 | 0.85736 | 1.72E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene55937 | 0.855663 | 5.42E-62 | -1.69E-46 |
| MS.gene059708 | MS.gene55937 | 0.843216 | 1.61E-58 | -1.69E-46 |
| MS.gene059858 | MS.gene55937 | 0.836957 | 6.90E-57 | -1.69E-46 |
| MS.gene059894 | MS.gene55937 | 0.852463 | 4.54E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene55937 | 0.928695 | 2.01E-92 | -1.69E-46 |
| MS.gene060193 | MS.gene55937 | 0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene55937 | 0.813907 | 2.02E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene55937 | 0.842375 | 2.69E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene55937 | 0.859648 | 3.58E-63 | -1.69E-46 |
| MS.gene06090 | MS.gene55937 | 0.802419 | 5.66E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene55937 | 0.802662 | 5.04E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene55937 | 0.842366 | 2.70E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene55937 | 0.817148 | 3.83E-52 | -1.69E-46 |
| MS.gene061051 | MS.gene55937 | -0.859577 | 3.76E-63 | -1.69E-46 |
| MS.gene061150 | MS.gene55937 | 0.828524 | 8.57E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene55937 | 0.894873 | 1.64E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55937.t1 | MTR_2g033020 | 93.525 | 417 | 15 | 2 | 1 | 416 | 1 | 406 | 0.0 | 785 |
| MS.gene55937.t1 | MTR_1g097610 | 30.244 | 205 | 134 | 4 | 169 | 367 | 275 | 476 | 4.42e-23 | 101 |
| MS.gene55937.t1 | MTR_3g084860 | 27.368 | 190 | 120 | 3 | 171 | 342 | 94 | 283 | 3.39e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55937.t1 | AT5G30510 | 72.987 | 385 | 91 | 2 | 33 | 415 | 40 | 413 | 0.0 | 589 |
| MS.gene55937.t1 | AT1G71720 | 33.171 | 205 | 128 | 4 | 169 | 367 | 261 | 462 | 3.55e-24 | 104 |
| MS.gene55937.t1 | AT3G23700 | 31.667 | 180 | 105 | 4 | 181 | 342 | 97 | 276 | 7.42e-22 | 97.1 |
| MS.gene55937.t1 | AT1G71720 | 32.500 | 160 | 100 | 3 | 169 | 322 | 261 | 418 | 6.37e-17 | 82.8 |
| MS.gene55937.t1 | AT5G14580 | 39.806 | 103 | 51 | 3 | 241 | 342 | 660 | 752 | 1.46e-11 | 67.0 |
| MS.gene55937.t1 | AT3G11964 | 28.758 | 153 | 100 | 4 | 264 | 412 | 1455 | 1602 | 4.30e-11 | 65.9 |
| MS.gene55937.t1 | AT3G11964 | 28.758 | 153 | 100 | 4 | 264 | 412 | 1431 | 1578 | 4.60e-11 | 65.5 |
Find 122 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGCTCTTTCTTTGTTAT+TGG | 0.111293 | 2.3:+57517240 | None:intergenic |
| ACTCTTGCTGGTTTGGTTTC+AGG | 0.113129 | 2.3:-57515843 | MS.gene55937:CDS |
| TACCAGGGCGTCTTTGTTTA+TGG | 0.126516 | 2.3:+57517290 | None:intergenic |
| CTGGTTTGGTTTCAGGTTAA+GGG | 0.265794 | 2.3:-57515836 | MS.gene55937:CDS |
| GCTGGTTTGGTTTCAGGTTA+AGG | 0.291495 | 2.3:-57515837 | MS.gene55937:CDS |
| CTCAATCATTATGCTTCAGC+TGG | 0.311857 | 2.3:+57513717 | None:intergenic |
| CAGGTTAAGGGCACTGTGTT+TGG | 0.314966 | 2.3:-57515824 | MS.gene55937:CDS |
| CGAATACAAGCGTTGGATTA+CGG | 0.315930 | 2.3:+57514429 | None:intergenic |
| AACAACTGACAAGCACAAAA+TGG | 0.319912 | 2.3:-57517348 | MS.gene55937:CDS |
| AATAGATTGGCGACTCTTGC+TGG | 0.328161 | 2.3:-57515855 | MS.gene55937:intron |
| CAAAGGCGCCATATGGCTTT+AGG | 0.331805 | 2.3:+57514720 | None:intergenic |
| TTTCAAGAGCTTCTGTAAAC+TGG | 0.350843 | 2.3:+57517143 | None:intergenic |
| GGATAAGTCTGGCTTGTTCC+TGG | 0.356772 | 2.3:+57514819 | None:intergenic |
| ATTGGCGACTCTTGCTGGTT+TGG | 0.364607 | 2.3:-57515850 | MS.gene55937:CDS |
| AAAGAGGAATTTGTAATTGT+TGG | 0.366149 | 2.3:-57515680 | MS.gene55937:CDS |
| GTCGACATTGGTGGAATTAG+TGG | 0.377742 | 2.3:-57514698 | MS.gene55937:CDS |
| GGCTGAAGTTGAAGGCCTTA+AGG | 0.383122 | 2.3:-57515301 | MS.gene55937:CDS |
| ACCAGGGCGTCTTTGTTTAT+GGG | 0.384161 | 2.3:+57517291 | None:intergenic |
| GCTGAAGTTGAAGGCCTTAA+GGG | 0.395706 | 2.3:-57515300 | MS.gene55937:CDS |
| TCCACCTCCACAAACTTTAG+AGG | 0.398733 | 2.3:+57514842 | None:intergenic |
| CTCAGCAGTGACGGGATCTT+AGG | 0.401069 | 2.3:-57513792 | MS.gene55937:CDS |
| TCCTCTAAAGTTTGTGGAGG+TGG | 0.403941 | 2.3:-57514843 | MS.gene55937:CDS |
| GAAGAAGCAGGCATAGTTCC+TGG | 0.411560 | 2.3:-57515707 | MS.gene55937:CDS |
| TTATGGGTTTGTGTTGTTGT+TGG | 0.413642 | 2.3:+57517307 | None:intergenic |
| AGACTTGCCGCCAGAGGGAC+TGG | 0.417394 | 2.3:-57513757 | MS.gene55937:CDS |
| AGAAGAGATTATTGAGTTTG+AGG | 0.422123 | 2.3:-57514867 | MS.gene55937:CDS |
| ATCCAATTCCTAGTTGTCCT+TGG | 0.432048 | 2.3:+57514768 | None:intergenic |
| CAGATTATTGATGCAAATAA+AGG | 0.442156 | 2.3:-57515333 | MS.gene55937:CDS |
| CTTGAGTTTAAGAGATATCC+AGG | 0.442490 | 2.3:-57515630 | MS.gene55937:CDS |
| ATCCAAGGACAACTAGGAAT+TGG | 0.443348 | 2.3:-57514770 | MS.gene55937:CDS |
| TGTAGGTTCCAACTTCTTTG+TGG | 0.443531 | 2.3:+57514466 | None:intergenic |
| TGAGGTTCCTCTAAAGTTTG+TGG | 0.448327 | 2.3:-57514849 | MS.gene55937:CDS |
| CAAAATGGACTCCCCTCCTA+TGG | 0.453863 | 2.3:-57517333 | MS.gene55937:CDS |
| TCCTAGTTGTCCTTGGATGC+CGG | 0.460240 | 2.3:+57514775 | None:intergenic |
| GGATGCCGGCTACGGCTTTG+CGG | 0.464033 | 2.3:+57514789 | None:intergenic |
| GTGCAAAGCCTAAAGCCATA+TGG | 0.465137 | 2.3:-57514728 | MS.gene55937:CDS |
| AGCCACCGCAAAGCCGTAGC+CGG | 0.475388 | 2.3:-57514794 | MS.gene55937:CDS |
| CTTTAGGCTTTGCACAGTGC+CGG | 0.475744 | 2.3:+57514736 | None:intergenic |
| ATGTCGACAAAGGCGCCATA+TGG | 0.479823 | 2.3:+57514713 | None:intergenic |
| CTACGGCTTTGCGGTGGCTA+AGG | 0.480015 | 2.3:+57514798 | None:intergenic |
| TTTCTTACAGGCGGAGGAGA+TGG | 0.489001 | 2.3:-57514123 | MS.gene55937:intron |
| TGGCTCGTGCTGATATGCTT+AGG | 0.493754 | 2.3:-57514061 | MS.gene55937:CDS |
| TGTTGTTGGTTTCCATAGGA+GGG | 0.499837 | 2.3:+57517321 | None:intergenic |
| ACCGTTGACATCTGTGAGAA+TGG | 0.503756 | 2.3:+57515270 | None:intergenic |
| TTTCCCATGCAAGCTCAGCC+TGG | 0.503771 | 2.3:+57515612 | None:intergenic |
| GGCGCCTTTGTCGACATTGG+TGG | 0.504154 | 2.3:-57514707 | MS.gene55937:CDS |
| AACAAGCAAATACCTCTGGC+TGG | 0.506114 | 2.3:+57514036 | None:intergenic |
| AAAGTTTGTGGAGGTGGACC+AGG | 0.506690 | 2.3:-57514837 | MS.gene55937:CDS |
| GTTGTTGGTTTCCATAGGAG+GGG | 0.510216 | 2.3:+57517322 | None:intergenic |
| TCAATCATTATGCTTCAGCT+GGG | 0.512179 | 2.3:+57513718 | None:intergenic |
| TTGTTGTTGGTTTCCATAGG+AGG | 0.513399 | 2.3:+57517320 | None:intergenic |
| ATATCCAGGCTGAGCTTGCA+TGG | 0.513898 | 2.3:-57515616 | MS.gene55937:CDS |
| GTGTTGTTGTTGGTTTCCAT+AGG | 0.514531 | 2.3:+57517317 | None:intergenic |
| ACAAATTCCTCTTTCACGCC+AGG | 0.517325 | 2.3:+57515689 | None:intergenic |
| CATAGTTCCTGGCGTGAAAG+AGG | 0.517603 | 2.3:-57515696 | MS.gene55937:CDS |
| AAGTCTTTCCACAAAGAAGT+TGG | 0.524278 | 2.3:-57514474 | MS.gene55937:CDS |
| AGAATGGTACAAATCCCTTA+AGG | 0.525661 | 2.3:+57515286 | None:intergenic |
| TTGTCCTTGGATGCCGGCTA+CGG | 0.530588 | 2.3:+57514781 | None:intergenic |
| AGCAGAAGATGCTGTTGTCA+AGG | 0.532605 | 2.3:-57515573 | MS.gene55937:CDS |
| GCAATGGAACATACAATACC+AGG | 0.537968 | 2.3:+57517274 | None:intergenic |
| CTTAGGCATGTAGAAGAAGC+AGG | 0.540089 | 2.3:-57515719 | MS.gene55937:CDS |
| TATGGCGCCTTTGTCGACAT+TGG | 0.542516 | 2.3:-57514710 | MS.gene55937:CDS |
| AGGCTGAGCTTGCATGGGAA+AGG | 0.542586 | 2.3:-57515610 | MS.gene55937:CDS |
| TCACTCAGATCCAGTCCCTC+TGG | 0.542917 | 2.3:+57513747 | None:intergenic |
| AAAGCCGTAGCCGGCATCCA+AGG | 0.543780 | 2.3:-57514785 | MS.gene55937:CDS |
| AGATGCTGTTGTCAAGGGTA+AGG | 0.545420 | 2.3:-57515567 | MS.gene55937:intron |
| TGAGTCTGAAATTGGAACCA+AGG | 0.547889 | 2.3:-57517110 | MS.gene55937:CDS |
| AACTCAATAATCTCTTCTCC+CGG | 0.548474 | 2.3:+57514872 | None:intergenic |
| ACCTTCTCGAATACAAGCGT+TGG | 0.548772 | 2.3:+57514422 | None:intergenic |
| AACAAAAGCTCCACTAGTAT+CGG | 0.548885 | 2.3:+57515799 | None:intergenic |
| GATTAACTCTCAGCAGTGAC+GGG | 0.550527 | 2.3:-57513800 | MS.gene55937:CDS |
| ACGTTGTCGTACTGCTCCAA+TGG | 0.554804 | 2.3:-57517188 | MS.gene55937:CDS |
| GCGGTGGCTAAGGATAAGTC+TGG | 0.558220 | 2.3:+57514808 | None:intergenic |
| ACCCATAAACAAAGACGCCC+TGG | 0.560647 | 2.3:-57517292 | MS.gene55937:CDS |
| GGTGTGGTGGCTGAAGTTGA+AGG | 0.562756 | 2.3:-57515309 | MS.gene55937:CDS |
| CTACATGCCTAAGTTTGTAG+AGG | 0.566419 | 2.3:+57515729 | None:intergenic |
| TTAAGTCATGACCGCGAGAG+AGG | 0.568064 | 2.3:-57514503 | MS.gene55937:CDS |
| AATAGCGCAAGCAGAAGCCA+TGG | 0.569153 | 2.3:-57514081 | MS.gene55937:CDS |
| AAGCATATCAGCACGAGCCA+TGG | 0.569475 | 2.3:+57514064 | None:intergenic |
| GGTCAAAATGAAATTGATGA+TGG | 0.574050 | 2.3:-57515659 | MS.gene55937:CDS |
| AAGAAGTTGGAACCTACACC+TGG | 0.576278 | 2.3:-57514461 | MS.gene55937:CDS |
| GGCTTACTTGCCGCTACGTG+AGG | 0.578744 | 2.3:-57515756 | MS.gene55937:CDS |
| TGACATTACTTCAAAGTCCA+CGG | 0.579638 | 2.3:-57515777 | MS.gene55937:CDS |
| GAGAGAGATTGGTATGGCCA+TGG | 0.580108 | 2.3:-57517383 | None:intergenic |
| GGATTACGGATCATATCTCC+AGG | 0.580645 | 2.3:+57514443 | None:intergenic |
| GCAGAAGATGCTGTTGTCAA+GGG | 0.582875 | 2.3:-57515572 | MS.gene55937:CDS |
| GTAAACGAAACACCTTCCAT+TGG | 0.585546 | 2.3:+57517172 | None:intergenic |
| TTGTTGAGCCACAGACGCCA+TGG | 0.587179 | 2.3:+57517366 | None:intergenic |
| TAATTTGACTGACATGAAGA+AGG | 0.587239 | 2.3:+57514675 | None:intergenic |
| GGTTCAGACTTGCCGCCAGA+GGG | 0.588733 | 2.3:-57513762 | MS.gene55937:CDS |
| GGTTCCTCTAAAGTTTGTGG+AGG | 0.589105 | 2.3:-57514846 | MS.gene55937:CDS |
| TGGTATGGCCATGGCGTCTG+TGG | 0.591247 | 2.3:-57517374 | None:intergenic |
| TGTCGTACTGCTCCAATGGA+AGG | 0.591894 | 2.3:-57517184 | MS.gene55937:CDS |
| GACGGGATCTTAGGACCACT+TGG | 0.593072 | 2.3:-57513783 | MS.gene55937:CDS |
| CGGATCATATCTCCAGGTGT+AGG | 0.593928 | 2.3:+57514449 | None:intergenic |
| GCCGGCATCCAAGGACAACT+AGG | 0.598178 | 2.3:-57514776 | MS.gene55937:CDS |
| CAATCATTATGCTTCAGCTG+GGG | 0.598240 | 2.3:+57513719 | None:intergenic |
| ATTGCAACTGTTCTTCAACC+TGG | 0.598301 | 2.3:-57514632 | MS.gene55937:CDS |
| AGGCGAGCCTCTACAAACTT+AGG | 0.599442 | 2.3:-57515736 | MS.gene55937:CDS |
| AATCATTATGCTTCAGCTGG+GGG | 0.600397 | 2.3:+57513720 | None:intergenic |
| GGATTAACTCTCAGCAGTGA+CGG | 0.600398 | 2.3:-57513801 | MS.gene55937:CDS |
| TATCCAGGCTGAGCTTGCAT+GGG | 0.601092 | 2.3:-57515615 | MS.gene55937:CDS |
| TGCCGGCTACGGCTTTGCGG+TGG | 0.601418 | 2.3:+57514792 | None:intergenic |
| TCAACCTGGTGATACTCTGA+AGG | 0.607339 | 2.3:-57514618 | MS.gene55937:intron |
| ATTGGCGCTTGTAATTGCAA+TGG | 0.609770 | 2.3:+57517258 | None:intergenic |
| GACTTACACGACCTCTCTCG+CGG | 0.618963 | 2.3:+57514492 | None:intergenic |
| ATTATTGATGCAAATAAAGG+TGG | 0.619527 | 2.3:-57515330 | MS.gene55937:CDS |
| TGGTTCAGACTTGCCGCCAG+AGG | 0.622339 | 2.3:-57513763 | MS.gene55937:CDS |
| GGAATTGGATCAGTTGTCAC+CGG | 0.623309 | 2.3:-57514755 | MS.gene55937:CDS |
| TGCAAATAAAGGTGGTGTGG+TGG | 0.633576 | 2.3:-57515322 | MS.gene55937:CDS |
| AATTCCACCAATGTCGACAA+AGG | 0.636907 | 2.3:+57514703 | None:intergenic |
| GTGTTTGGCACCGATACTAG+TGG | 0.637091 | 2.3:-57515809 | MS.gene55937:CDS |
| TTTACCTTCAGAGTATCACC+AGG | 0.639151 | 2.3:+57514614 | None:intergenic |
| ACCATTCTCACAGATGTCAA+CGG | 0.642453 | 2.3:-57515271 | MS.gene55937:intron |
| ACGTAGCGGCAAGTAAGCCG+TGG | 0.643506 | 2.3:+57515760 | None:intergenic |
| TAGAGGCTCGCCTCACGTAG+CGG | 0.651152 | 2.3:+57515746 | None:intergenic |
| TCCAACGCTTGTATTCGAGA+AGG | 0.655139 | 2.3:-57514423 | MS.gene55937:intron |
| TGATGCAAATAAAGGTGGTG+TGG | 0.659116 | 2.3:-57515325 | MS.gene55937:CDS |
| TATGCTTAGGTTCCAGCCAG+AGG | 0.664471 | 2.3:-57514048 | MS.gene55937:intron |
| GGCGGCAAGTCTGAACCAAG+TGG | 0.672418 | 2.3:+57513768 | None:intergenic |
| CTCAGATCCAGTCCCTCTGG+CGG | 0.676022 | 2.3:+57513750 | None:intergenic |
| CAATGGAACATACAATACCA+GGG | 0.706248 | 2.3:+57517275 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTTTTAATTTATGA+TGG | - | chr2.3:57514289-57514308 | MS.gene55937:intron | 10.0% |
| !!! | TTGTAAATTTTATACATTTA+AGG | + | chr2.3:57514613-57514632 | None:intergenic | 10.0% |
| !!! | TTTTAATGTTAACTTTTAAT+CGG | - | chr2.3:57516941-57516960 | MS.gene55937:intron | 10.0% |
| !!! | TTTTATGTATTTTAACTATT+AGG | - | chr2.3:57514887-57514906 | MS.gene55937:intron | 10.0% |
| !!! | TTTTTATGCTATTTTAATTT+TGG | + | chr2.3:57517161-57517180 | None:intergenic | 10.0% |
| !!! | CTTTGTATTTTATTGAATTT+TGG | - | chr2.3:57514093-57514112 | MS.gene55937:CDS | 15.0% |
| !!! | TAAACTTCTAATTTTGATAA+GGG | + | chr2.3:57516152-57516171 | None:intergenic | 15.0% |
| !!! | TAATTTATGATGGATAAAAA+GGG | - | chr2.3:57514299-57514318 | MS.gene55937:intron | 15.0% |
| !!! | TGTTTTTTTTTGTAGAATTT+TGG | - | chr2.3:57514267-57514286 | MS.gene55937:intron | 15.0% |
| !!! | TTAAGAGTAAAAAATCATTT+TGG | + | chr2.3:57514833-57514852 | None:intergenic | 15.0% |
| !!! | TTAATTTATGATGGATAAAA+AGG | - | chr2.3:57514298-57514317 | MS.gene55937:intron | 15.0% |
| !!! | TTTAAGATGAATTTTGATTT+GGG | - | chr2.3:57514046-57514065 | MS.gene55937:intron | 15.0% |
| !!! | TTTGCAATTTTATATTTTCA+AGG | - | chr2.3:57515104-57515123 | MS.gene55937:intron | 15.0% |
| !!! | TTTTAAGATGAATTTTGATT+TGG | - | chr2.3:57514045-57514064 | MS.gene55937:intron | 15.0% |
| !!! | TTTTGGATTTTTTTAGTTTA+TGG | - | chr2.3:57514110-57514129 | MS.gene55937:CDS | 15.0% |
| !! | ATCTCATTCTTTATATGATT+AGG | - | chr2.3:57516561-57516580 | MS.gene55937:intron | 20.0% |
| !! | ATTGTGTATGAACAAAAAAA+TGG | - | chr2.3:57514389-57514408 | MS.gene55937:intron | 20.0% |
| !! | GAAAATAATCAAAGAAAGTT+AGG | + | chr2.3:57516867-57516886 | None:intergenic | 20.0% |
| !! | GCTTGAAAAATAATCATTAA+AGG | + | chr2.3:57515179-57515198 | None:intergenic | 20.0% |
| !! | TGCGAAAAAAATAGATAAAA+GGG | + | chr2.3:57516196-57516215 | None:intergenic | 20.0% |
| !! | TGTTGAATTAATAATGTTTG+TGG | - | chr2.3:57514020-57514039 | MS.gene55937:intron | 20.0% |
| !! | TTGTGTATGAACAAAAAAAT+GGG | - | chr2.3:57514390-57514409 | MS.gene55937:intron | 20.0% |
| !! | TTTCAATTGAATTGAGTATT+CGG | - | chr2.3:57514458-57514477 | MS.gene55937:CDS | 20.0% |
| !!! | AAACTTCTAATTTTGATAAG+GGG | + | chr2.3:57516151-57516170 | None:intergenic | 20.0% |
| !!! | AATTTATGATGGATAAAAAG+GGG | - | chr2.3:57514300-57514319 | MS.gene55937:intron | 20.0% |
| !!! | ACACATTGTTAGTAATTTTA+TGG | + | chr2.3:57515085-57515104 | None:intergenic | 20.0% |
| !!! | CTAAACTTCTAATTTTGATA+AGG | + | chr2.3:57516153-57516172 | None:intergenic | 20.0% |
| !!! | GTAATTAATCTGAAATAGAT+TGG | - | chr2.3:57515227-57515246 | MS.gene55937:intron | 20.0% |
| !!! | GTTGATGCAATATATTTTAT+TGG | - | chr2.3:57515984-57516003 | MS.gene55937:intron | 20.0% |
| !!! | TTAAGATGAATTTTGATTTG+GGG | - | chr2.3:57514047-57514066 | MS.gene55937:intron | 20.0% |
| !!! | TTTAAGATGAATTTTGATGT+GGG | - | chr2.3:57514217-57514236 | MS.gene55937:intron | 20.0% |
| !!! | TTTTAAGATGAATTTTGATG+TGG | - | chr2.3:57514216-57514235 | MS.gene55937:intron | 20.0% |
| !!! | TTTTTAGTTTATGGTGAAAA+GGG | - | chr2.3:57514119-57514138 | MS.gene55937:intron | 20.0% |
| !!! | TTTTTTAGTTTATGGTGAAA+AGG | - | chr2.3:57514118-57514137 | MS.gene55937:intron | 20.0% |
| ! | AAAGAGGAATTTGTAATTGT+TGG | - | chr2.3:57515415-57515434 | MS.gene55937:intron | 25.0% |
| ! | AACACATTTAGAGAACAAAA+TGG | + | chr2.3:57514920-57514939 | None:intergenic | 25.0% |
| ! | AAGTTCATAAATGTCAAAGT+AGG | + | chr2.3:57515861-57515880 | None:intergenic | 25.0% |
| ! | ACTAGCAAAAAAGATATTTC+GGG | + | chr2.3:57514989-57515008 | None:intergenic | 25.0% |
| ! | AGTTCCATCATAGATAATAT+AGG | + | chr2.3:57516037-57516056 | None:intergenic | 25.0% |
| ! | ATATCGATGAATTGTATTAC+AGG | + | chr2.3:57516507-57516526 | None:intergenic | 25.0% |
| ! | ATTATTGATGCAAATAAAGG+TGG | - | chr2.3:57515765-57515784 | MS.gene55937:CDS | 25.0% |
| ! | CAGATTATTGATGCAAATAA+AGG | - | chr2.3:57515762-57515781 | MS.gene55937:CDS | 25.0% |
| ! | CATATGAGTGAAAAAGAAAT+TGG | + | chr2.3:57515726-57515745 | None:intergenic | 25.0% |
| ! | CTGCGAAAAAAATAGATAAA+AGG | + | chr2.3:57516197-57516216 | None:intergenic | 25.0% |
| ! | GACTAGCAAAAAAGATATTT+CGG | + | chr2.3:57514990-57515009 | None:intergenic | 25.0% |
| ! | GAGATAGTAAAGTTAATTTC+TGG | - | chr2.3:57514537-57514556 | MS.gene55937:intron | 25.0% |
| ! | TAAACAACATTAAGCTGTAA+CGG | + | chr2.3:57514503-57514522 | None:intergenic | 25.0% |
| ! | TAAAGGCTAAACATTCAATT+GGG | + | chr2.3:57515162-57515181 | None:intergenic | 25.0% |
| ! | TACTCTTAATATCTGACTAA+TGG | - | chr2.3:57514844-57514863 | MS.gene55937:CDS | 25.0% |
| ! | TCATATGTGTAAAATTTGTG+TGG | - | chr2.3:57515739-57515758 | MS.gene55937:CDS | 25.0% |
| ! | TGAAAGAACTATTCATATTG+AGG | - | chr2.3:57515205-57515224 | MS.gene55937:intron | 25.0% |
| ! | TTAAAGGCTAAACATTCAAT+TGG | + | chr2.3:57515163-57515182 | None:intergenic | 25.0% |
| ! | TTACTTAAAAAAGAGACACT+TGG | - | chr2.3:57514746-57514765 | MS.gene55937:CDS | 25.0% |
| !! | AATAACAAAGCTAAGCATTT+TGG | + | chr2.3:57516833-57516852 | None:intergenic | 25.0% |
| !! | ACATTTTCCTCATAAACATT+AGG | + | chr2.3:57514363-57514382 | None:intergenic | 25.0% |
| !! | GATGCAATATATTTTATTGG+TGG | - | chr2.3:57515987-57516006 | MS.gene55937:intron | 25.0% |
| !!! | ATCTTTTTTGCTAGTCATTT+TGG | - | chr2.3:57514994-57515013 | MS.gene55937:intron | 25.0% |
| !!! | GTGTCTTTTTTTAGTCATTT+TGG | - | chr2.3:57514649-57514668 | MS.gene55937:CDS | 25.0% |
| !!! | TATGATTTTGAGTCTGAAAT+TGG | - | chr2.3:57513977-57513996 | MS.gene55937:intron | 25.0% |
| !!! | TTAAGATGAATTTTGATGTG+GGG | - | chr2.3:57514218-57514237 | MS.gene55937:intron | 25.0% |
| AATTAACAAGCAAATACCTC+TGG | + | chr2.3:57517066-57517085 | None:intergenic | 30.0% | |
| ACATGCATTGAATCAAAACT+TGG | - | chr2.3:57515881-57515900 | MS.gene55937:intron | 30.0% | |
| AGAAGAGATTATTGAGTTTG+AGG | - | chr2.3:57516228-57516247 | MS.gene55937:intron | 30.0% | |
| AGTGAAAAAGAAATTGGTAG+GGG | + | chr2.3:57515720-57515739 | None:intergenic | 30.0% | |
| CAACAAAAAAAAACTTGCCT+TGG | + | chr2.3:57514005-57514024 | None:intergenic | 30.0% | |
| CCATCATAGATAATATAGGA+AGG | + | chr2.3:57516033-57516052 | None:intergenic | 30.0% | |
| CCTTCCTATATTATCTATGA+TGG | - | chr2.3:57516030-57516049 | MS.gene55937:intron | 30.0% | |
| CGATATTTGAATAGAGTTAC+AGG | - | chr2.3:57516521-57516540 | MS.gene55937:intron | 30.0% | |
| GAATATCATATCAGTAGTCA+TGG | - | chr2.3:57516755-57516774 | MS.gene55937:intron | 30.0% | |
| GACAATGTCTTACATATTGA+GGG | - | chr2.3:57515135-57515154 | MS.gene55937:intron | 30.0% | |
| GAGTGAAAAAGAAATTGGTA+GGG | + | chr2.3:57515721-57515740 | None:intergenic | 30.0% | |
| GGAGAAAATCAACTCATAAA+TGG | + | chr2.3:57515699-57515718 | None:intergenic | 30.0% | |
| GGTCAAAATGAAATTGATGA+TGG | - | chr2.3:57515436-57515455 | MS.gene55937:intron | 30.0% | |
| TAATTTGACTGACATGAAGA+AGG | + | chr2.3:57516423-57516442 | None:intergenic | 30.0% | |
| TACTAGAAACTAATCCAAAC+AGG | + | chr2.3:57514428-57514447 | None:intergenic | 30.0% | |
| TCTTAATATCTGACTAATGG+TGG | - | chr2.3:57514847-57514866 | MS.gene55937:CDS | 30.0% | |
| TGACAATGTCTTACATATTG+AGG | - | chr2.3:57515134-57515153 | MS.gene55937:intron | 30.0% | |
| TGAGTGAAAAAGAAATTGGT+AGG | + | chr2.3:57515722-57515741 | None:intergenic | 30.0% | |
| TGGATTACCTAATGTTTATG+AGG | - | chr2.3:57514353-57514372 | MS.gene55937:intron | 30.0% | |
| ! | ACTCTGGAAAACAAACAATA+AGG | + | chr2.3:57517274-57517293 | None:intergenic | 30.0% |
| ! | CTCTGGAAAACAAACAATAA+GGG | + | chr2.3:57517273-57517292 | None:intergenic | 30.0% |
| ! | CTTTGCTCTTTCTTTGTTAT+TGG | + | chr2.3:57513858-57513877 | None:intergenic | 30.0% |
| !! | AAGTTAATTTCTGGAGTGAA+CGG | - | chr2.3:57514546-57514565 | MS.gene55937:intron | 30.0% |
| !! | ATTTGCAATCTTTAGAGCTT+AGG | + | chr2.3:57515956-57515975 | None:intergenic | 30.0% |
| !! | TGGATTAGTTTCTAGTACAT+TGG | - | chr2.3:57514431-57514450 | MS.gene55937:CDS | 30.0% |
| !! | TGTAGAATGACATGTTTTTG+AGG | - | chr2.3:57514326-57514345 | MS.gene55937:intron | 30.0% |
| !! | TTATTGTTTGTTTTCCAGAG+TGG | - | chr2.3:57517273-57517292 | MS.gene55937:CDS | 30.0% |
| !!! | AGTCATTTTGGTTCTTGAAT+GGG | - | chr2.3:57514661-57514680 | MS.gene55937:CDS | 30.0% |
| !!! | ATTTTTTTCGCAGAAAACAC+CGG | - | chr2.3:57516204-57516223 | MS.gene55937:intron | 30.0% |
| !!! | GTTGATTTTTTTCTTACAGG+CGG | - | chr2.3:57516963-57516982 | MS.gene55937:intron | 30.0% |
| !!! | TAGTCATTTTGGTTCTTGAA+TGG | - | chr2.3:57514660-57514679 | MS.gene55937:CDS | 30.0% |
| !!! | TCGGTTGATTTTTTTCTTAC+AGG | - | chr2.3:57516960-57516979 | MS.gene55937:intron | 30.0% |
| AAACTATTCAGCAGTAGAAG+TGG | + | chr2.3:57517188-57517207 | None:intergenic | 35.0% | |
| AACAAAAGCTCCACTAGTAT+CGG | + | chr2.3:57515299-57515318 | None:intergenic | 35.0% | |
| AACAACTGACAAGCACAAAA+TGG | - | chr2.3:57513747-57513766 | MS.gene55937:CDS | 35.0% | |
| AACTCAATAATCTCTTCTCC+CGG | + | chr2.3:57516226-57516245 | None:intergenic | 35.0% | |
| AAGTCTTTCCACAAAGAAGT+TGG | - | chr2.3:57516621-57516640 | MS.gene55937:intron | 35.0% | |
| ACAATGGCTATTGAGAGAAA+CGG | - | chr2.3:57515921-57515940 | MS.gene55937:intron | 35.0% | |
| AGAAACTAATCCAAACAGGT+TGG | + | chr2.3:57514424-57514443 | None:intergenic | 35.0% | |
| AGAATGGTACAAATCCCTTA+AGG | + | chr2.3:57515812-57515831 | None:intergenic | 35.0% | |
| CAATGGAACATACAATACCA+GGG | + | chr2.3:57513823-57513842 | None:intergenic | 35.0% | |
| CTTGAATGTGTCTTCTGTTA+GGG | - | chr2.3:57514702-57514721 | MS.gene55937:CDS | 35.0% | |
| CTTGAGTTTAAGAGATATCC+AGG | - | chr2.3:57515465-57515484 | MS.gene55937:intron | 35.0% | |
| TGACATTACTTCAAAGTCCA+CGG | - | chr2.3:57515318-57515337 | MS.gene55937:CDS | 35.0% | |
| TGCATTGAATCAAAACTTGG+CGG | - | chr2.3:57515884-57515903 | MS.gene55937:intron | 35.0% | |
| TTGAATGTGTCTTCTGTTAG+GGG | - | chr2.3:57514703-57514722 | MS.gene55937:CDS | 35.0% | |
| TTTCAAGAGCTTCTGTAAAC+TGG | + | chr2.3:57513955-57513974 | None:intergenic | 35.0% | |
| ! | GGCAAGTAAAAAAGGTACAA+TGG | - | chr2.3:57515905-57515924 | MS.gene55937:intron | 35.0% |
| ! | TTATGGGTTTGTGTTGTTGT+TGG | + | chr2.3:57513791-57513810 | None:intergenic | 35.0% |
| !! | GCTATTGAAAAGTGTTGAAG+TGG | + | chr2.3:57516889-57516908 | None:intergenic | 35.0% |
| !!! | TAAGCATTTTGGCTTCTTGT+AGG | + | chr2.3:57516822-57516841 | None:intergenic | 35.0% |
| !!! | TGACATGTTTTTGAGGTTTG+TGG | - | chr2.3:57514333-57514352 | MS.gene55937:intron | 35.0% |
| !!! | TTTTTTTCGCAGAAAACACC+GGG | - | chr2.3:57516205-57516224 | MS.gene55937:intron | 35.0% |
| AACTTGGCGGCAAGTAAAAA+AGG | - | chr2.3:57515897-57515916 | MS.gene55937:intron | 40.0% | |
| AATTCCACCAATGTCGACAA+AGG | + | chr2.3:57516395-57516414 | None:intergenic | 40.0% | |
| ACCATTCTCACAGATGTCAA+CGG | - | chr2.3:57515824-57515843 | MS.gene55937:CDS | 40.0% | |
| ATCCAAGGACAACTAGGAAT+TGG | - | chr2.3:57516325-57516344 | MS.gene55937:intron | 40.0% | |
| ATCCAATTCCTAGTTGTCCT+TGG | + | chr2.3:57516330-57516349 | None:intergenic | 40.0% | |
| ATTGCAACTGTTCTTCAACC+TGG | - | chr2.3:57516463-57516482 | MS.gene55937:intron | 40.0% | |
| ATTGGCGCTTGTAATTGCAA+TGG | + | chr2.3:57513840-57513859 | None:intergenic | 40.0% | |
| CACACATCTAACGACCAAAA+TGG | + | chr2.3:57514572-57514591 | None:intergenic | 40.0% | |
| CTACATGCCTAAGTTTGTAG+AGG | + | chr2.3:57515369-57515388 | None:intergenic | 40.0% | |
| GCAATGGAACATACAATACC+AGG | + | chr2.3:57513824-57513843 | None:intergenic | 40.0% | |
| GCTTGAATGTGTCTTCTGTT+AGG | - | chr2.3:57514701-57514720 | MS.gene55937:CDS | 40.0% | |
| GTAAACGAAACACCTTCCAT+TGG | + | chr2.3:57513926-57513945 | None:intergenic | 40.0% | |
| TGATGCAAATAAAGGTGGTG+TGG | - | chr2.3:57515770-57515789 | MS.gene55937:CDS | 40.0% | |
| TGTAGGTTCCAACTTCTTTG+TGG | + | chr2.3:57516632-57516651 | None:intergenic | 40.0% | |
| ! | GAAGCAGAAAAAGCATGAAG+TGG | + | chr2.3:57516788-57516807 | None:intergenic | 40.0% |
| ! | GTTACTTTAGTCCTCGAATG+TGG | - | chr2.3:57515039-57515058 | MS.gene55937:intron | 40.0% |
| ! | TGAGTCTGAAATTGGAACCA+AGG | - | chr2.3:57513985-57514004 | MS.gene55937:intron | 40.0% |
| ! | TTTACCTTCAGAGTATCACC+AGG | + | chr2.3:57516484-57516503 | None:intergenic | 40.0% |
| ! | TTTTGGTCTCCACATGAATG+AGG | + | chr2.3:57514816-57514835 | None:intergenic | 40.0% |
| !! | AATCCAAACAGGTTGGTACA+AGG | + | chr2.3:57514417-57514436 | None:intergenic | 40.0% |
| !! | CGAATACAAGCGTTGGATTA+CGG | + | chr2.3:57516669-57516688 | None:intergenic | 40.0% |
| !! | CTGGTTTGGTTTCAGGTTAA+GGG | - | chr2.3:57515259-57515278 | MS.gene55937:intron | 40.0% |
| !! | GTGTTGTTGTTGGTTTCCAT+AGG | + | chr2.3:57513781-57513800 | None:intergenic | 40.0% |
| !! | TGAGGTTCCTCTAAAGTTTG+TGG | - | chr2.3:57516246-57516265 | MS.gene55937:intron | 40.0% |
| !! | TGTTGTTGGTTTCCATAGGA+GGG | + | chr2.3:57513777-57513796 | None:intergenic | 40.0% |
| !! | TTGTTGTTGGTTTCCATAGG+AGG | + | chr2.3:57513778-57513797 | None:intergenic | 40.0% |
| !!! | GATTTTTTTCTTACAGGCGG+AGG | - | chr2.3:57516966-57516985 | MS.gene55937:intron | 40.0% |
| !!! | GGGAAAGAGTTTTGAGTTGT+TGG | + | chr2.3:57516176-57516195 | None:intergenic | 40.0% |
| AACAAGCAAATACCTCTGGC+TGG | + | chr2.3:57517062-57517081 | None:intergenic | 45.0% | |
| AAGAAGTTGGAACCTACACC+TGG | - | chr2.3:57516634-57516653 | MS.gene55937:intron | 45.0% | |
| AATAGATTGGCGACTCTTGC+TGG | - | chr2.3:57515240-57515259 | MS.gene55937:intron | 45.0% | |
| ACAAATTCCTCTTTCACGCC+AGG | + | chr2.3:57515409-57515428 | None:intergenic | 45.0% | |
| ACCAACGAAATCCACATTCG+AGG | + | chr2.3:57515053-57515072 | None:intergenic | 45.0% | |
| ACCGTTGACATCTGTGAGAA+TGG | + | chr2.3:57515828-57515847 | None:intergenic | 45.0% | |
| ACCTTCTCGAATACAAGCGT+TGG | + | chr2.3:57516676-57516695 | None:intergenic | 45.0% | |
| AGATGCTGTTGTCAAGGGTA+AGG | - | chr2.3:57515528-57515547 | MS.gene55937:intron | 45.0% | |
| AGCAGAAGATGCTGTTGTCA+AGG | - | chr2.3:57515522-57515541 | MS.gene55937:intron | 45.0% | |
| ATGAAACTGAAGCAGCAGCA+AGG | - | chr2.3:57517112-57517131 | MS.gene55937:CDS | 45.0% | |
| CTTAGGCATGTAGAAGAAGC+AGG | - | chr2.3:57515376-57515395 | MS.gene55937:intron | 45.0% | |
| GATTAACTCTCAGCAGTGAC+GGG | - | chr2.3:57517295-57517314 | MS.gene55937:CDS | 45.0% | |
| GCAGAAGATGCTGTTGTCAA+GGG | - | chr2.3:57515523-57515542 | MS.gene55937:intron | 45.0% | |
| GCTGAAGTTGAAGGCCTTAA+GGG | - | chr2.3:57515795-57515814 | MS.gene55937:CDS | 45.0% | |
| GGAATTGGATCAGTTGTCAC+CGG | - | chr2.3:57516340-57516359 | MS.gene55937:intron | 45.0% | |
| GGATTAACTCTCAGCAGTGA+CGG | - | chr2.3:57517294-57517313 | MS.gene55937:CDS | 45.0% | |
| GGATTACGGATCATATCTCC+AGG | + | chr2.3:57516655-57516674 | None:intergenic | 45.0% | |
| GTCGACATTGGTGGAATTAG+TGG | - | chr2.3:57516397-57516416 | MS.gene55937:intron | 45.0% | |
| GTGCAAAGCCTAAAGCCATA+TGG | - | chr2.3:57516367-57516386 | MS.gene55937:intron | 45.0% | |
| GTGTCTTCTGTTAGGGGATT+TGG | - | chr2.3:57514709-57514728 | MS.gene55937:CDS | 45.0% | |
| TCAACCTGGTGATACTCTGA+AGG | - | chr2.3:57516477-57516496 | MS.gene55937:intron | 45.0% | |
| TCCAACGCTTGTATTCGAGA+AGG | - | chr2.3:57516672-57516691 | MS.gene55937:intron | 45.0% | |
| TCCACCTCCACAAACTTTAG+AGG | + | chr2.3:57516256-57516275 | None:intergenic | 45.0% | |
| TCCTCGAATGTGGATTTCGT+TGG | - | chr2.3:57515049-57515068 | MS.gene55937:intron | 45.0% | |
| TGAAACTGAAGCAGCAGCAA+GGG | - | chr2.3:57517113-57517132 | MS.gene55937:CDS | 45.0% | |
| TGCAAATAAAGGTGGTGTGG+TGG | - | chr2.3:57515773-57515792 | MS.gene55937:CDS | 45.0% | |
| TGCTGAGAGTTAATCCACTC+TGG | + | chr2.3:57517290-57517309 | None:intergenic | 45.0% | |
| ! | ACCAGGGCGTCTTTGTTTAT+GGG | + | chr2.3:57513807-57513826 | None:intergenic | 45.0% |
| ! | TACCAGGGCGTCTTTGTTTA+TGG | + | chr2.3:57513808-57513827 | None:intergenic | 45.0% |
| !! | ACTCTTGCTGGTTTGGTTTC+AGG | - | chr2.3:57515252-57515271 | MS.gene55937:intron | 45.0% |
| !! | GCTGGTTTGGTTTCAGGTTA+AGG | - | chr2.3:57515258-57515277 | MS.gene55937:intron | 45.0% |
| !! | GGTTCCTCTAAAGTTTGTGG+AGG | - | chr2.3:57516249-57516268 | MS.gene55937:intron | 45.0% |
| !! | GTTGTTGGTTTCCATAGGAG+GGG | + | chr2.3:57513776-57513795 | None:intergenic | 45.0% |
| !! | TCCTCTAAAGTTTGTGGAGG+TGG | - | chr2.3:57516252-57516271 | MS.gene55937:intron | 45.0% |
| !!! | TTTTAAGTAATTTTATTTTA+TGG | + | chr2.3:57514736-57514755 | None:intergenic | 5.0% |
| AAAGTTTGTGGAGGTGGACC+AGG | - | chr2.3:57516258-57516277 | MS.gene55937:intron | 50.0% | |
| AAGCAGCAGCAAGGGATCAA+AGG | - | chr2.3:57517121-57517140 | MS.gene55937:CDS | 50.0% | |
| AAGCATATCAGCACGAGCCA+TGG | + | chr2.3:57517034-57517053 | None:intergenic | 50.0% | |
| AATAGCGCAAGCAGAAGCCA+TGG | - | chr2.3:57517014-57517033 | MS.gene55937:intron | 50.0% | |
| ACCCATAAACAAAGACGCCC+TGG | - | chr2.3:57513803-57513822 | MS.gene55937:CDS | 50.0% | |
| ACGTTGTCGTACTGCTCCAA+TGG | - | chr2.3:57513907-57513926 | MS.gene55937:intron | 50.0% | |
| AGGCGAGCCTCTACAAACTT+AGG | - | chr2.3:57515359-57515378 | MS.gene55937:intron | 50.0% | |
| ATATCCAGGCTGAGCTTGCA+TGG | - | chr2.3:57515479-57515498 | MS.gene55937:intron | 50.0% | |
| CATAGTTCCTGGCGTGAAAG+AGG | - | chr2.3:57515399-57515418 | MS.gene55937:intron | 50.0% | |
| CGGATCATATCTCCAGGTGT+AGG | + | chr2.3:57516649-57516668 | None:intergenic | 50.0% | |
| CTTTAGGCTTTGCACAGTGC+CGG | + | chr2.3:57516362-57516381 | None:intergenic | 50.0% | |
| GAAGAAGCAGGCATAGTTCC+TGG | - | chr2.3:57515388-57515407 | MS.gene55937:intron | 50.0% | |
| GGACCTTGTACCAACCTGTT+TGG | - | chr2.3:57514411-57514430 | MS.gene55937:intron | 50.0% | |
| GGCTGAAGTTGAAGGCCTTA+AGG | - | chr2.3:57515794-57515813 | MS.gene55937:CDS | 50.0% | |
| TATCCAGGCTGAGCTTGCAT+GGG | - | chr2.3:57515480-57515499 | MS.gene55937:intron | 50.0% | |
| TATGCTTAGGTTCCAGCCAG+AGG | - | chr2.3:57517047-57517066 | MS.gene55937:intron | 50.0% | |
| TATGGCGCCTTTGTCGACAT+TGG | - | chr2.3:57516385-57516404 | MS.gene55937:intron | 50.0% | |
| TCCTAGTTGTCCTTGGATGC+CGG | + | chr2.3:57516323-57516342 | None:intergenic | 50.0% | |
| TGTCGTACTGCTCCAATGGA+AGG | - | chr2.3:57513911-57513930 | MS.gene55937:intron | 50.0% | |
| TTAAGTCATGACCGCGAGAG+AGG | - | chr2.3:57516592-57516611 | MS.gene55937:intron | 50.0% | |
| TTTCTTACAGGCGGAGGAGA+TGG | - | chr2.3:57516972-57516991 | MS.gene55937:intron | 50.0% | |
| ! | ATTGGCGACTCTTGCTGGTT+TGG | - | chr2.3:57515245-57515264 | MS.gene55937:intron | 50.0% |
| ! | CAAAATGGACTCCCCTCCTA+TGG | - | chr2.3:57513762-57513781 | MS.gene55937:CDS | 50.0% |
| ! | TGGCTCGTGCTGATATGCTT+AGG | - | chr2.3:57517034-57517053 | MS.gene55937:intron | 50.0% |
| !! | ATGTCGACAAAGGCGCCATA+TGG | + | chr2.3:57516385-57516404 | None:intergenic | 50.0% |
| !! | CAAAGGCGCCATATGGCTTT+AGG | + | chr2.3:57516378-57516397 | None:intergenic | 50.0% |
| !! | CAGGTTAAGGGCACTGTGTT+TGG | - | chr2.3:57515271-57515290 | MS.gene55937:intron | 50.0% |
| !! | GGATAAGTCTGGCTTGTTCC+TGG | + | chr2.3:57516279-57516298 | None:intergenic | 50.0% |
| !! | GTGTTTGGCACCGATACTAG+TGG | - | chr2.3:57515286-57515305 | MS.gene55937:CDS | 50.0% |
| !! | TCTGGAGTGAACGGCCATTT+TGG | - | chr2.3:57514555-57514574 | MS.gene55937:intron | 50.0% |
| AGGCTGAGCTTGCATGGGAA+AGG | - | chr2.3:57515485-57515504 | MS.gene55937:intron | 55.0% | |
| GACGGGATCTTAGGACCACT+TGG | - | chr2.3:57517312-57517331 | MS.gene55937:CDS | 55.0% | |
| GACTTACACGACCTCTCTCG+CGG | + | chr2.3:57516606-57516625 | None:intergenic | 55.0% | |
| GCGGTGGCTAAGGATAAGTC+TGG | + | chr2.3:57516290-57516309 | None:intergenic | 55.0% | |
| GGTGTGGTGGCTGAAGTTGA+AGG | - | chr2.3:57515786-57515805 | MS.gene55937:CDS | 55.0% | |
| TCACTCAGATCCAGTCCCTC+TGG | + | chr2.3:57517351-57517370 | None:intergenic | 55.0% | |
| TTGTTGAGCCACAGACGCCA+TGG | + | chr2.3:57513732-57513751 | None:intergenic | 55.0% | |
| TTTCCCATGCAAGCTCAGCC+TGG | + | chr2.3:57515486-57515505 | None:intergenic | 55.0% | |
| ! | CTCAGCAGTGACGGGATCTT+AGG | - | chr2.3:57517303-57517322 | MS.gene55937:CDS | 55.0% |
| ! | TTGTCCTTGGATGCCGGCTA+CGG | + | chr2.3:57516317-57516336 | None:intergenic | 55.0% |
| !! | GTGAGAGCGCCTCATTCATG+TGG | - | chr2.3:57514804-57514823 | MS.gene55937:CDS | 55.0% |
| AAAGCCGTAGCCGGCATCCA+AGG | - | chr2.3:57516310-57516329 | MS.gene55937:intron | 60.0% | |
| ACGTAGCGGCAAGTAAGCCG+TGG | + | chr2.3:57515338-57515357 | None:intergenic | 60.0% | |
| CTACGGCTTTGCGGTGGCTA+AGG | + | chr2.3:57516300-57516319 | None:intergenic | 60.0% | |
| CTCAGATCCAGTCCCTCTGG+CGG | + | chr2.3:57517348-57517367 | None:intergenic | 60.0% | |
| GCCGGCATCCAAGGACAACT+AGG | - | chr2.3:57516319-57516338 | MS.gene55937:intron | 60.0% | |
| GGCGCCTTTGTCGACATTGG+TGG | - | chr2.3:57516388-57516407 | MS.gene55937:intron | 60.0% | |
| GGCGGCAAGTCTGAACCAAG+TGG | + | chr2.3:57517330-57517349 | None:intergenic | 60.0% | |
| GGCTTACTTGCCGCTACGTG+AGG | - | chr2.3:57515339-57515358 | MS.gene55937:intron | 60.0% | |
| GGTTCAGACTTGCCGCCAGA+GGG | - | chr2.3:57517333-57517352 | MS.gene55937:CDS | 60.0% | |
| TAGAGGCTCGCCTCACGTAG+CGG | + | chr2.3:57515352-57515371 | None:intergenic | 60.0% | |
| TGGTTCAGACTTGCCGCCAG+AGG | - | chr2.3:57517332-57517351 | MS.gene55937:CDS | 60.0% | |
| AGACTTGCCGCCAGAGGGAC+TGG | - | chr2.3:57517338-57517357 | MS.gene55937:CDS | 65.0% | |
| AGCCACCGCAAAGCCGTAGC+CGG | - | chr2.3:57516301-57516320 | MS.gene55937:intron | 65.0% | |
| ! | GGATGCCGGCTACGGCTTTG+CGG | + | chr2.3:57516309-57516328 | None:intergenic | 65.0% |
| ! | TGCCGGCTACGGCTTTGCGG+TGG | + | chr2.3:57516306-57516325 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 57513725 | 57517392 | 57513725 | ID=MS.gene55937 |
| chr2.3 | mRNA | 57513725 | 57517392 | 57513725 | ID=MS.gene55937.t1;Parent=MS.gene55937 |
| chr2.3 | exon | 57517107 | 57517392 | 57517107 | ID=MS.gene55937.t1.exon1;Parent=MS.gene55937.t1 |
| chr2.3 | CDS | 57517107 | 57517392 | 57517107 | ID=cds.MS.gene55937.t1;Parent=MS.gene55937.t1 |
| chr2.3 | exon | 57515568 | 57515872 | 57515568 | ID=MS.gene55937.t1.exon2;Parent=MS.gene55937.t1 |
| chr2.3 | CDS | 57515568 | 57515872 | 57515568 | ID=cds.MS.gene55937.t1;Parent=MS.gene55937.t1 |
| chr2.3 | exon | 57515272 | 57515352 | 57515272 | ID=MS.gene55937.t1.exon3;Parent=MS.gene55937.t1 |
| chr2.3 | CDS | 57515272 | 57515352 | 57515272 | ID=cds.MS.gene55937.t1;Parent=MS.gene55937.t1 |
| chr2.3 | exon | 57514619 | 57514900 | 57514619 | ID=MS.gene55937.t1.exon4;Parent=MS.gene55937.t1 |
| chr2.3 | CDS | 57514619 | 57514900 | 57514619 | ID=cds.MS.gene55937.t1;Parent=MS.gene55937.t1 |
| chr2.3 | exon | 57514424 | 57514534 | 57514424 | ID=MS.gene55937.t1.exon5;Parent=MS.gene55937.t1 |
| chr2.3 | CDS | 57514424 | 57514534 | 57514424 | ID=cds.MS.gene55937.t1;Parent=MS.gene55937.t1 |
| chr2.3 | exon | 57514049 | 57514135 | 57514049 | ID=MS.gene55937.t1.exon6;Parent=MS.gene55937.t1 |
| chr2.3 | CDS | 57514049 | 57514135 | 57514049 | ID=cds.MS.gene55937.t1;Parent=MS.gene55937.t1 |
| chr2.3 | exon | 57513725 | 57513826 | 57513725 | ID=MS.gene55937.t1.exon7;Parent=MS.gene55937.t1 |
| chr2.3 | CDS | 57513725 | 57513826 | 57513725 | ID=cds.MS.gene55937.t1;Parent=MS.gene55937.t1 |
| Gene Sequence |
| Protein sequence |
