Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57202.t1 | XP_003611625.1 | 95.1 | 649 | 13 | 1 | 1 | 649 | 1 | 630 | 0.00E+00 | 1136.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57202.t1 | Q66GP0 | 62.3 | 644 | 193 | 10 | 16 | 649 | 1 | 604 | 2.8e-197 | 689.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57202.t1 | G7IU11 | 95.1 | 649 | 13 | 1 | 1 | 649 | 1 | 630 | 0.0e+00 | 1136.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene57202 | 0.811343 | 7.34E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene57202 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene57202 | 0.801301 | 9.61E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene57202 | 0.861368 | 1.08E-63 | -1.69E-46 |
| MS.gene049369 | MS.gene57202 | 0.874433 | 6.78E-68 | -1.69E-46 |
| MS.gene049396 | MS.gene57202 | 0.848825 | 4.79E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene57202 | 0.84855 | 5.71E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene57202 | 0.816907 | 4.34E-52 | -1.69E-46 |
| MS.gene049907 | MS.gene57202 | 0.815756 | 7.86E-52 | -1.69E-46 |
| MS.gene050122 | MS.gene57202 | 0.807374 | 5.22E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene57202 | 0.835408 | 1.71E-56 | -1.69E-46 |
| MS.gene050499 | MS.gene57202 | 0.805784 | 1.13E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene57202 | 0.85213 | 5.65E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene57202 | 0.842335 | 2.75E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene57202 | 0.836972 | 6.84E-57 | -1.69E-46 |
| MS.gene050686 | MS.gene57202 | 0.836556 | 8.73E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene57202 | 0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene57202 | 0.869389 | 3.21E-66 | -1.69E-46 |
| MS.gene050950 | MS.gene57202 | 0.818009 | 2.45E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene57202 | 0.864572 | 1.10E-64 | -1.69E-46 |
| MS.gene051228 | MS.gene57202 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene051255 | MS.gene57202 | 0.837823 | 4.14E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene57202 | 0.837078 | 6.43E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene57202 | 0.847379 | 1.20E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene57202 | 0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene57202 | 0.810166 | 1.32E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene57202 | 0.846669 | 1.88E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene57202 | 0.829102 | 6.21E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene57202 | 0.808706 | 2.71E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene57202 | 0.822917 | 1.83E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene57202 | 0.830062 | 3.63E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene57202 | 0.816506 | 5.34E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene57202 | 0.828552 | 8.44E-55 | -1.69E-46 |
| MS.gene052508 | MS.gene57202 | 0.817623 | 3.00E-52 | -1.69E-46 |
| MS.gene052510 | MS.gene57202 | 0.823587 | 1.28E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene57202 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene57202 | 0.821482 | 3.94E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene57202 | 0.823741 | 1.18E-53 | -1.69E-46 |
| MS.gene052999 | MS.gene57202 | 0.803587 | 3.25E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene57202 | 0.800434 | 1.44E-48 | -1.69E-46 |
| MS.gene053018 | MS.gene57202 | 0.809593 | 1.75E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene57202 | 0.82713 | 1.85E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene57202 | 0.835419 | 1.70E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene57202 | 0.829103 | 6.21E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene57202 | 0.834033 | 3.79E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene57202 | 0.826648 | 2.42E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene57202 | 0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene053384 | MS.gene57202 | 0.806143 | 9.49E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene57202 | 0.86576 | 4.67E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene57202 | 0.865385 | 6.14E-65 | -1.69E-46 |
| MS.gene053626 | MS.gene57202 | 0.803315 | 3.70E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene57202 | 0.819728 | 9.97E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene57202 | 0.858478 | 8.01E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene57202 | 0.832319 | 1.01E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene57202 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene57202 | 0.84187 | 3.65E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene57202 | 0.815932 | 7.18E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene57202 | 0.815578 | 8.60E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene57202 | 0.847704 | 9.77E-60 | -1.69E-46 |
| MS.gene05505 | MS.gene57202 | 0.883712 | 3.56E-71 | -1.69E-46 |
| MS.gene055116 | MS.gene57202 | 0.822981 | 1.77E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene57202 | 0.822021 | 2.96E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene57202 | 0.826928 | 2.07E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene57202 | 0.805265 | 1.45E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene57202 | 0.828548 | 8.46E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene57202 | 0.81302 | 3.16E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene57202 | 0.802435 | 5.62E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene57202 | 0.885093 | 1.09E-71 | -1.69E-46 |
| MS.gene055909 | MS.gene57202 | 0.85878 | 6.51E-63 | -1.69E-46 |
| MS.gene055911 | MS.gene57202 | 0.854145 | 1.50E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene57202 | 0.880842 | 3.93E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene57202 | 0.825884 | 3.67E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene57202 | 0.802493 | 5.47E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene57202 | 0.809882 | 1.52E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene57202 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene57202 | 0.82956 | 4.81E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene57202 | 0.860141 | 2.54E-63 | -1.69E-46 |
| MS.gene056448 | MS.gene57202 | 0.850399 | 1.74E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene57202 | 0.867222 | 1.60E-65 | -1.69E-46 |
| MS.gene05664 | MS.gene57202 | 0.80573 | 1.16E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene57202 | 0.812259 | 4.64E-51 | -1.69E-46 |
| MS.gene05666 | MS.gene57202 | 0.838801 | 2.32E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene57202 | 0.801458 | 8.92E-49 | -1.69E-46 |
| MS.gene056947 | MS.gene57202 | 0.858413 | 8.38E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene57202 | 0.853854 | 1.81E-61 | -1.69E-46 |
| MS.gene057146 | MS.gene57202 | 0.825757 | 3.94E-54 | -1.69E-46 |
| MS.gene057285 | MS.gene57202 | 0.810357 | 1.20E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene57202 | 0.865113 | 7.47E-65 | -1.69E-46 |
| MS.gene05735 | MS.gene57202 | 0.817098 | 3.93E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene57202 | 0.833507 | 5.13E-56 | -1.69E-46 |
| MS.gene057450 | MS.gene57202 | 0.802027 | 6.82E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene57202 | 0.849529 | 3.05E-60 | -1.69E-46 |
| MS.gene057856 | MS.gene57202 | 0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene57202 | 0.859951 | 2.90E-63 | -1.69E-46 |
| MS.gene058006 | MS.gene57202 | 0.844434 | 7.58E-59 | -1.69E-46 |
| MS.gene058007 | MS.gene57202 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene57202 | 0.806095 | 9.72E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene57202 | 0.809292 | 2.03E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene57202 | 0.83158 | 1.54E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene57202 | 0.837482 | 5.07E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene57202 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene57202 | 0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene57202 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene058459 | MS.gene57202 | 0.820797 | 5.67E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene57202 | 0.807726 | 4.39E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene57202 | 0.812193 | 4.80E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene57202 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene058948 | MS.gene57202 | 0.819413 | 1.18E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene57202 | 0.823967 | 1.04E-53 | -1.69E-46 |
| MS.gene059305 | MS.gene57202 | 0.830866 | 2.31E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene57202 | 0.813506 | 2.47E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene57202 | 0.824976 | 6.03E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene57202 | 0.812471 | 4.17E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene57202 | 0.838919 | 2.16E-57 | -1.69E-46 |
| MS.gene059517 | MS.gene57202 | 0.801639 | 8.19E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene57202 | 0.807193 | 5.70E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene57202 | 0.852436 | 4.62E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene57202 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene059680 | MS.gene57202 | 0.817655 | 2.95E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene57202 | 0.844473 | 7.40E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene57202 | 0.830461 | 2.90E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene57202 | 0.832525 | 9.00E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene57202 | 0.874915 | 4.65E-68 | -1.69E-46 |
| MS.gene059718 | MS.gene57202 | 0.814654 | 1.38E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene57202 | 0.840982 | 6.26E-58 | -1.69E-46 |
| MS.gene05986 | MS.gene57202 | 0.815027 | 1.14E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene57202 | 0.839676 | 1.37E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene57202 | 0.800509 | 1.39E-48 | -1.69E-46 |
| MS.gene060193 | MS.gene57202 | 0.819669 | 1.03E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene57202 | 0.8076 | 4.67E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene57202 | 0.82255 | 2.23E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene57202 | 0.87206 | 4.25E-67 | -1.69E-46 |
| MS.gene060818 | MS.gene57202 | 0.844756 | 6.21E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene57202 | 0.845336 | 4.33E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene57202 | 0.908187 | 2.25E-81 | -1.69E-46 |
| MS.gene06092 | MS.gene57202 | 0.808075 | 3.70E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene57202 | 0.856783 | 2.55E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene57202 | -0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene57202 | 0.823467 | 1.36E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene57202 | 0.828615 | 8.15E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57202.t1 | MTR_5g016060 | 95.069 | 649 | 13 | 1 | 1 | 649 | 1 | 630 | 0.0 | 1264 |
| MS.gene57202.t1 | MTR_5g016060 | 97.674 | 516 | 12 | 0 | 134 | 649 | 1 | 516 | 0.0 | 1043 |
| MS.gene57202.t1 | MTR_4g095430 | 68.153 | 628 | 161 | 10 | 28 | 649 | 1 | 595 | 0.0 | 847 |
| MS.gene57202.t1 | MTR_4g022330 | 42.096 | 582 | 296 | 7 | 57 | 625 | 32 | 585 | 8.22e-161 | 476 |
| MS.gene57202.t1 | MTR_1g088885 | 41.760 | 625 | 293 | 16 | 58 | 649 | 35 | 621 | 1.83e-152 | 454 |
| MS.gene57202.t1 | MTR_7g108290 | 43.925 | 535 | 272 | 9 | 58 | 570 | 35 | 563 | 7.16e-147 | 442 |
| MS.gene57202.t1 | MTR_5g075640 | 38.049 | 615 | 296 | 9 | 24 | 625 | 9 | 551 | 2.10e-140 | 422 |
| MS.gene57202.t1 | MTR_7g073980 | 40.692 | 607 | 315 | 14 | 54 | 645 | 29 | 605 | 2.86e-140 | 424 |
| MS.gene57202.t1 | MTR_3g062540 | 39.465 | 636 | 300 | 13 | 24 | 649 | 8 | 568 | 7.68e-140 | 420 |
| MS.gene57202.t1 | MTR_4g093850 | 38.821 | 577 | 280 | 8 | 56 | 570 | 41 | 606 | 3.19e-130 | 399 |
| MS.gene57202.t1 | MTR_3g062540 | 39.587 | 581 | 285 | 12 | 79 | 649 | 2 | 526 | 8.25e-126 | 382 |
| MS.gene57202.t1 | MTR_5g075640 | 37.500 | 560 | 284 | 8 | 79 | 625 | 2 | 508 | 2.07e-125 | 382 |
| MS.gene57202.t1 | MTR_2g009340 | 37.759 | 580 | 284 | 9 | 58 | 570 | 43 | 612 | 3.05e-123 | 381 |
| MS.gene57202.t1 | MTR_8g090220 | 36.804 | 557 | 276 | 11 | 59 | 570 | 52 | 577 | 1.88e-117 | 365 |
| MS.gene57202.t1 | MTR_8g090220 | 38.716 | 483 | 234 | 8 | 59 | 507 | 52 | 506 | 3.93e-114 | 352 |
| MS.gene57202.t1 | MTR_2g018750 | 36.213 | 544 | 292 | 10 | 59 | 555 | 26 | 561 | 7.38e-114 | 354 |
| MS.gene57202.t1 | MTR_2g084595 | 35.325 | 569 | 329 | 13 | 59 | 595 | 23 | 584 | 3.06e-111 | 348 |
| MS.gene57202.t1 | MTR_8g078900 | 34.448 | 598 | 317 | 12 | 59 | 586 | 20 | 612 | 1.41e-110 | 347 |
| MS.gene57202.t1 | MTR_8g078900 | 34.471 | 586 | 309 | 12 | 71 | 586 | 2 | 582 | 4.68e-107 | 337 |
| MS.gene57202.t1 | MTR_1g094850 | 36.667 | 510 | 281 | 8 | 41 | 519 | 3 | 501 | 1.01e-106 | 336 |
| MS.gene57202.t1 | MTR_5g032780 | 36.861 | 548 | 245 | 11 | 49 | 524 | 11 | 529 | 1.86e-105 | 333 |
| MS.gene57202.t1 | MTR_8g078900 | 36.007 | 536 | 288 | 11 | 101 | 586 | 42 | 572 | 4.67e-103 | 327 |
| MS.gene57202.t1 | MTR_1g106430 | 38.086 | 491 | 266 | 12 | 56 | 524 | 25 | 499 | 8.93e-103 | 326 |
| MS.gene57202.t1 | MTR_5g015790 | 39.232 | 469 | 264 | 9 | 56 | 512 | 24 | 483 | 6.29e-101 | 321 |
| MS.gene57202.t1 | MTR_1g064360 | 34.818 | 494 | 274 | 7 | 49 | 518 | 16 | 485 | 1.60e-100 | 318 |
| MS.gene57202.t1 | MTR_1g014070 | 37.815 | 476 | 272 | 10 | 51 | 510 | 19 | 486 | 3.93e-100 | 319 |
| MS.gene57202.t1 | MTR_4g093850 | 38.696 | 460 | 218 | 6 | 56 | 461 | 41 | 490 | 7.86e-99 | 313 |
| MS.gene57202.t1 | MTR_4g134210 | 34.764 | 466 | 284 | 7 | 55 | 512 | 22 | 475 | 2.04e-93 | 301 |
| MS.gene57202.t1 | MTR_2g048390 | 36.222 | 450 | 258 | 8 | 41 | 461 | 3 | 452 | 1.63e-92 | 294 |
| MS.gene57202.t1 | MTR_8g069330 | 35.433 | 508 | 270 | 12 | 62 | 538 | 29 | 509 | 9.68e-87 | 283 |
| MS.gene57202.t1 | MTR_2g027410 | 34.348 | 460 | 278 | 6 | 58 | 512 | 25 | 465 | 1.51e-84 | 276 |
| MS.gene57202.t1 | MTR_8g078900 | 34.967 | 449 | 241 | 9 | 59 | 461 | 20 | 463 | 2.32e-81 | 265 |
| MS.gene57202.t1 | MTR_1g105870 | 60.000 | 220 | 62 | 4 | 66 | 282 | 38 | 234 | 3.10e-79 | 252 |
| MS.gene57202.t1 | MTR_2g084595 | 34.813 | 428 | 249 | 11 | 59 | 461 | 23 | 445 | 1.99e-77 | 254 |
| MS.gene57202.t1 | MTR_1g082690 | 31.559 | 526 | 309 | 13 | 61 | 573 | 60 | 547 | 3.40e-77 | 256 |
| MS.gene57202.t1 | MTR_8g078900 | 37.209 | 387 | 212 | 8 | 101 | 461 | 42 | 423 | 3.09e-74 | 245 |
| MS.gene57202.t1 | MTR_2g027410 | 33.495 | 412 | 250 | 6 | 106 | 512 | 1 | 393 | 4.09e-68 | 231 |
| MS.gene57202.t1 | MTR_4g011530 | 39.362 | 282 | 152 | 4 | 238 | 513 | 46 | 314 | 1.43e-57 | 201 |
| MS.gene57202.t1 | MTR_2g102730 | 36.119 | 335 | 187 | 6 | 238 | 563 | 24 | 340 | 7.73e-55 | 193 |
| MS.gene57202.t1 | MTR_4g045767 | 27.405 | 551 | 331 | 19 | 62 | 577 | 11 | 527 | 3.18e-49 | 181 |
| MS.gene57202.t1 | MTR_4g074190 | 25.508 | 541 | 342 | 15 | 62 | 570 | 6 | 517 | 6.40e-41 | 157 |
| MS.gene57202.t1 | MTR_4g074190 | 25.502 | 498 | 314 | 12 | 101 | 570 | 3 | 471 | 5.08e-39 | 150 |
| MS.gene57202.t1 | MTR_1g035720 | 25.801 | 562 | 329 | 20 | 62 | 581 | 6 | 521 | 1.99e-38 | 149 |
| MS.gene57202.t1 | MTR_4g074190 | 25.000 | 432 | 274 | 12 | 62 | 463 | 6 | 417 | 3.50e-31 | 127 |
| MS.gene57202.t1 | MTR_2g010890 | 24.876 | 402 | 260 | 11 | 126 | 514 | 2 | 374 | 5.99e-25 | 108 |
| MS.gene57202.t1 | MTR_2g048375 | 43.158 | 95 | 50 | 3 | 478 | 570 | 1 | 93 | 7.85e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57202.t1 | AT5G67385 | 65.204 | 638 | 184 | 9 | 16 | 649 | 1 | 604 | 0.0 | 808 |
| MS.gene57202.t1 | AT5G67385 | 67.073 | 574 | 170 | 8 | 80 | 649 | 1 | 559 | 0.0 | 753 |
| MS.gene57202.t1 | AT5G67385 | 67.073 | 574 | 170 | 8 | 80 | 649 | 1 | 559 | 0.0 | 753 |
| MS.gene57202.t1 | AT5G67385 | 67.073 | 574 | 170 | 8 | 80 | 649 | 1 | 559 | 0.0 | 753 |
| MS.gene57202.t1 | AT5G67385 | 67.073 | 574 | 170 | 8 | 80 | 649 | 1 | 559 | 0.0 | 753 |
| MS.gene57202.t1 | AT3G49970 | 53.938 | 584 | 190 | 14 | 71 | 649 | 6 | 515 | 0.0 | 575 |
| MS.gene57202.t1 | AT3G49970 | 53.938 | 584 | 190 | 14 | 71 | 649 | 6 | 515 | 0.0 | 575 |
| MS.gene57202.t1 | AT5G48800 | 44.692 | 584 | 268 | 11 | 57 | 625 | 39 | 582 | 3.26e-159 | 471 |
| MS.gene57202.t1 | AT1G03010 | 39.876 | 647 | 310 | 13 | 48 | 649 | 21 | 633 | 5.65e-147 | 441 |
| MS.gene57202.t1 | AT2G30520 | 39.470 | 641 | 312 | 11 | 24 | 649 | 14 | 593 | 2.14e-146 | 437 |
| MS.gene57202.t1 | AT1G03010 | 40.063 | 634 | 304 | 12 | 58 | 649 | 8 | 607 | 6.38e-146 | 437 |
| MS.gene57202.t1 | AT1G03010 | 40.063 | 634 | 304 | 12 | 58 | 649 | 35 | 634 | 1.53e-145 | 437 |
| MS.gene57202.t1 | AT2G47860 | 42.620 | 542 | 265 | 10 | 58 | 570 | 36 | 560 | 1.00e-139 | 422 |
| MS.gene57202.t1 | AT2G47860 | 40.885 | 565 | 265 | 11 | 58 | 570 | 36 | 583 | 3.11e-134 | 409 |
| MS.gene57202.t1 | AT3G08570 | 42.589 | 533 | 278 | 13 | 54 | 570 | 30 | 550 | 4.68e-133 | 404 |
| MS.gene57202.t1 | AT2G30520 | 39.932 | 586 | 295 | 10 | 79 | 649 | 2 | 545 | 2.01e-132 | 400 |
| MS.gene57202.t1 | AT2G30520 | 39.932 | 586 | 295 | 10 | 79 | 649 | 2 | 545 | 2.01e-132 | 400 |
| MS.gene57202.t1 | AT1G30440 | 36.077 | 571 | 316 | 10 | 59 | 585 | 26 | 591 | 1.56e-117 | 365 |
| MS.gene57202.t1 | AT3G08660 | 37.277 | 617 | 311 | 13 | 41 | 645 | 16 | 568 | 4.80e-117 | 362 |
| MS.gene57202.t1 | AT5G13600 | 39.792 | 480 | 259 | 8 | 62 | 519 | 29 | 500 | 8.89e-115 | 356 |
| MS.gene57202.t1 | AT5G64330 | 35.739 | 582 | 270 | 8 | 56 | 535 | 49 | 628 | 1.88e-110 | 347 |
| MS.gene57202.t1 | AT5G64330 | 33.896 | 652 | 305 | 11 | 58 | 588 | 51 | 697 | 4.58e-110 | 348 |
| MS.gene57202.t1 | AT5G03250 | 36.237 | 574 | 318 | 14 | 61 | 596 | 28 | 591 | 1.82e-108 | 340 |
| MS.gene57202.t1 | AT3G08660 | 37.413 | 572 | 282 | 13 | 86 | 645 | 1 | 508 | 2.61e-107 | 334 |
| MS.gene57202.t1 | AT2G47860 | 42.925 | 424 | 206 | 8 | 58 | 461 | 36 | 443 | 3.45e-105 | 326 |
| MS.gene57202.t1 | AT5G66560 | 36.449 | 535 | 267 | 11 | 59 | 527 | 19 | 546 | 1.98e-104 | 332 |
| MS.gene57202.t1 | AT5G64330 | 34.982 | 566 | 264 | 8 | 72 | 535 | 6 | 569 | 1.81e-102 | 325 |
| MS.gene57202.t1 | AT3G44820 | 33.743 | 569 | 326 | 10 | 59 | 582 | 23 | 585 | 3.67e-102 | 325 |
| MS.gene57202.t1 | AT5G66560 | 36.711 | 523 | 258 | 11 | 71 | 527 | 2 | 517 | 1.60e-100 | 320 |
| MS.gene57202.t1 | AT2G14820 | 37.113 | 485 | 282 | 9 | 57 | 526 | 25 | 501 | 1.92e-100 | 320 |
| MS.gene57202.t1 | AT2G14820 | 37.113 | 485 | 282 | 9 | 57 | 526 | 25 | 501 | 1.92e-100 | 320 |
| MS.gene57202.t1 | AT5G66560 | 40.312 | 449 | 239 | 10 | 101 | 527 | 66 | 507 | 3.39e-100 | 319 |
| MS.gene57202.t1 | AT2G47860 | 40.716 | 447 | 206 | 9 | 58 | 461 | 36 | 466 | 5.30e-100 | 313 |
| MS.gene57202.t1 | AT2G47860 | 40.351 | 456 | 229 | 9 | 144 | 570 | 1 | 442 | 6.56e-100 | 315 |
| MS.gene57202.t1 | AT2G47860 | 40.351 | 456 | 229 | 9 | 144 | 570 | 1 | 442 | 6.56e-100 | 315 |
| MS.gene57202.t1 | AT1G67900 | 38.433 | 536 | 253 | 12 | 49 | 527 | 11 | 526 | 3.55e-99 | 317 |
| MS.gene57202.t1 | AT1G67900 | 38.433 | 536 | 253 | 12 | 49 | 527 | 11 | 526 | 3.55e-99 | 317 |
| MS.gene57202.t1 | AT1G67900 | 38.433 | 536 | 253 | 12 | 49 | 527 | 11 | 526 | 3.55e-99 | 317 |
| MS.gene57202.t1 | AT1G67900 | 38.433 | 536 | 253 | 12 | 49 | 527 | 11 | 526 | 3.55e-99 | 317 |
| MS.gene57202.t1 | AT1G67900 | 38.433 | 536 | 253 | 12 | 49 | 527 | 11 | 526 | 3.55e-99 | 317 |
| MS.gene57202.t1 | AT1G67900 | 38.433 | 536 | 253 | 12 | 49 | 527 | 11 | 526 | 3.55e-99 | 317 |
| MS.gene57202.t1 | AT3G50840 | 34.387 | 538 | 313 | 8 | 44 | 570 | 1 | 509 | 2.64e-98 | 313 |
| MS.gene57202.t1 | AT5G10250 | 33.808 | 562 | 300 | 14 | 58 | 581 | 49 | 576 | 5.08e-95 | 305 |
| MS.gene57202.t1 | AT5G10250 | 33.696 | 552 | 299 | 14 | 58 | 581 | 49 | 561 | 9.14e-93 | 299 |
| MS.gene57202.t1 | AT4G31820 | 34.855 | 482 | 278 | 10 | 58 | 527 | 26 | 483 | 2.01e-89 | 289 |
| MS.gene57202.t1 | AT5G67440 | 36.266 | 466 | 275 | 10 | 56 | 512 | 24 | 476 | 3.04e-88 | 286 |
| MS.gene57202.t1 | AT5G67440 | 36.266 | 466 | 275 | 10 | 56 | 512 | 24 | 476 | 3.04e-88 | 286 |
| MS.gene57202.t1 | AT4G37590 | 35.174 | 489 | 270 | 10 | 56 | 528 | 24 | 481 | 3.15e-88 | 286 |
| MS.gene57202.t1 | AT3G50840 | 34.661 | 502 | 288 | 8 | 80 | 570 | 1 | 473 | 4.46e-88 | 285 |
| MS.gene57202.t1 | AT3G50840 | 34.661 | 502 | 288 | 8 | 80 | 570 | 1 | 473 | 4.46e-88 | 285 |
| MS.gene57202.t1 | AT2G23050 | 33.613 | 476 | 270 | 10 | 56 | 525 | 24 | 459 | 1.43e-83 | 271 |
| MS.gene57202.t1 | AT5G47800 | 32.444 | 487 | 294 | 10 | 54 | 527 | 21 | 485 | 3.31e-83 | 273 |
| MS.gene57202.t1 | AT5G47800 | 32.444 | 487 | 294 | 10 | 54 | 527 | 21 | 485 | 3.31e-83 | 273 |
| MS.gene57202.t1 | AT5G47800 | 32.444 | 487 | 294 | 10 | 54 | 527 | 21 | 485 | 3.31e-83 | 273 |
| MS.gene57202.t1 | AT5G67440 | 35.938 | 448 | 265 | 10 | 74 | 512 | 5 | 439 | 1.14e-82 | 271 |
| MS.gene57202.t1 | AT5G47800 | 32.444 | 487 | 294 | 10 | 54 | 527 | 134 | 598 | 8.56e-82 | 272 |
| MS.gene57202.t1 | AT3G08660 | 38.515 | 431 | 232 | 9 | 41 | 465 | 16 | 419 | 3.45e-81 | 263 |
| MS.gene57202.t1 | AT4G31820 | 34.141 | 454 | 263 | 10 | 86 | 527 | 1 | 430 | 1.65e-78 | 259 |
| MS.gene57202.t1 | AT3G26490 | 32.068 | 527 | 292 | 12 | 49 | 523 | 11 | 523 | 6.07e-78 | 259 |
| MS.gene57202.t1 | AT3G26490 | 32.068 | 527 | 292 | 12 | 49 | 523 | 11 | 523 | 6.07e-78 | 259 |
| MS.gene57202.t1 | AT3G26490 | 32.068 | 527 | 292 | 12 | 49 | 523 | 11 | 523 | 6.07e-78 | 259 |
| MS.gene57202.t1 | AT5G03250 | 34.560 | 489 | 274 | 13 | 144 | 596 | 1 | 479 | 2.07e-76 | 252 |
| MS.gene57202.t1 | AT5G66560 | 33.333 | 468 | 240 | 10 | 59 | 461 | 19 | 479 | 8.92e-74 | 245 |
| MS.gene57202.t1 | AT3G26490 | 30.603 | 464 | 261 | 11 | 49 | 465 | 11 | 460 | 1.50e-58 | 205 |
| MS.gene57202.t1 | AT5G48130 | 29.474 | 475 | 282 | 13 | 52 | 510 | 30 | 467 | 4.73e-56 | 201 |
| MS.gene57202.t1 | AT2G23050 | 32.637 | 383 | 217 | 9 | 144 | 525 | 1 | 343 | 1.84e-55 | 193 |
| MS.gene57202.t1 | AT1G52770 | 36.306 | 314 | 166 | 5 | 212 | 513 | 13 | 304 | 3.25e-55 | 195 |
| MS.gene57202.t1 | AT3G15570 | 35.439 | 285 | 153 | 4 | 247 | 513 | 38 | 309 | 4.24e-50 | 181 |
| MS.gene57202.t1 | AT3G19850 | 27.851 | 456 | 279 | 10 | 84 | 510 | 29 | 463 | 5.83e-48 | 177 |
| MS.gene57202.t1 | AT1G50280 | 28.817 | 465 | 288 | 11 | 68 | 506 | 13 | 460 | 1.32e-45 | 170 |
| MS.gene57202.t1 | AT1G50280 | 29.742 | 427 | 262 | 10 | 101 | 506 | 18 | 427 | 9.11e-45 | 167 |
| MS.gene57202.t1 | AT3G22104 | 26.974 | 456 | 273 | 10 | 61 | 497 | 6 | 420 | 5.02e-39 | 151 |
| MS.gene57202.t1 | AT5G17580 | 26.170 | 470 | 305 | 10 | 61 | 517 | 22 | 462 | 1.68e-37 | 147 |
| MS.gene57202.t1 | AT5G17580 | 26.170 | 470 | 305 | 10 | 61 | 517 | 7 | 447 | 1.80e-37 | 147 |
| MS.gene57202.t1 | AT3G03510 | 27.451 | 408 | 240 | 9 | 113 | 515 | 8 | 364 | 2.11e-37 | 145 |
| MS.gene57202.t1 | AT3G22104 | 25.326 | 383 | 229 | 7 | 131 | 497 | 4 | 345 | 8.04e-27 | 114 |
| MS.gene57202.t1 | AT3G22104 | 25.326 | 383 | 229 | 7 | 131 | 497 | 4 | 345 | 8.04e-27 | 114 |
| MS.gene57202.t1 | AT3G22104 | 25.326 | 383 | 229 | 7 | 131 | 497 | 4 | 345 | 8.04e-27 | 114 |
| MS.gene57202.t1 | AT3G49900 | 32.418 | 182 | 102 | 7 | 62 | 232 | 68 | 239 | 1.72e-11 | 67.4 |
| MS.gene57202.t1 | AT3G49900 | 32.418 | 182 | 102 | 7 | 62 | 232 | 68 | 239 | 2.04e-11 | 67.4 |
Find 107 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTCCATGTCACTTAAAT+TGG | 0.099646 | 5.3:+8847439 | None:intergenic |
| AGCCTTAGACATCTATTTAA+AGG | 0.193457 | 5.3:-8848257 | MS.gene57202:intron |
| TCTTTCGAGCAGGATATATT+TGG | 0.214701 | 5.3:-8848784 | MS.gene57202:intron |
| TAAAGGAAGATTCTCCAATT+TGG | 0.228988 | 5.3:+8850135 | None:intergenic |
| GACATTGCATTCTTCTCTTT+TGG | 0.249323 | 5.3:+8848685 | None:intergenic |
| GGAAATCACTTTGTCTATAA+TGG | 0.251037 | 5.3:-8848451 | MS.gene57202:CDS |
| GATTTCCAATTTGAGATTCT+TGG | 0.281748 | 5.3:+8848467 | None:intergenic |
| TACCTTTAAATAGATGTCTA+AGG | 0.307550 | 5.3:+8848255 | None:intergenic |
| AGTTGCTTGCAGGCTTGATT+TGG | 0.310330 | 5.3:-8848611 | MS.gene57202:CDS |
| ATTCCTTCATATTCATTTAC+CGG | 0.317680 | 5.3:-8848538 | MS.gene57202:CDS |
| TTTAGTTTGGTGTGAATAGA+AGG | 0.321571 | 5.3:+8847254 | None:intergenic |
| CTATAAGAACTCTTTGAAAA+AGG | 0.323564 | 5.3:+8849254 | None:intergenic |
| AATAGCAGAGAAAACAAAAT+TGG | 0.326409 | 5.3:-8849446 | MS.gene57202:CDS |
| TTGATACAACAGTTGCTTGC+AGG | 0.331579 | 5.3:-8848621 | MS.gene57202:CDS |
| GTTGAACTCTCTGATGTTCC+TGG | 0.333752 | 5.3:-8849697 | MS.gene57202:CDS |
| ACCTGAATATACATTTAGTT+TGG | 0.337497 | 5.3:+8847241 | None:intergenic |
| AAAAGAATGGCAATGCAATT+AGG | 0.350908 | 5.3:-8848586 | MS.gene57202:CDS |
| TCGAAAATCATTTATAAGTT+CGG | 0.354375 | 5.3:-8847009 | MS.gene57202:CDS |
| AATTACCAAGAATCTCAAAT+TGG | 0.354888 | 5.3:-8848472 | MS.gene57202:CDS |
| AGTGATGTCAATGTCCAAAT+TGG | 0.359152 | 5.3:-8850149 | MS.gene57202:CDS |
| CTCTCCATGTCACTTAAATT+GGG | 0.374237 | 5.3:+8847440 | None:intergenic |
| TTCTGTCATCTCGAGATATT+CGG | 0.394543 | 5.3:+8849582 | None:intergenic |
| AAAGAAAGTTTGCAGCATAA+TGG | 0.400198 | 5.3:-8847417 | MS.gene57202:CDS |
| AGATTATTCAGTTGGGAACT+TGG | 0.401252 | 5.3:-8849560 | MS.gene57202:CDS |
| TATCCACACTTGGAGACTAA+TGG | 0.409668 | 5.3:+8849766 | None:intergenic |
| AGAGAACTTGGACAACGGTT+TGG | 0.419568 | 5.3:+8847333 | None:intergenic |
| AACAGAGACCAGTTGTTGAT+TGG | 0.421313 | 5.3:-8849309 | MS.gene57202:CDS |
| AGTTCGGTTTCAAAGAAACT+TGG | 0.421844 | 5.3:-8846993 | MS.gene57202:CDS |
| GGGTTTAAACAGTTTGCTAT+TGG | 0.424370 | 5.3:-8849217 | MS.gene57202:CDS |
| AAGAGTTCTTATAGCAATGA+TGG | 0.430446 | 5.3:-8849245 | MS.gene57202:CDS |
| AAATGAAGACCTCAAATTAG+AGG | 0.432193 | 5.3:-8847177 | MS.gene57202:CDS |
| ATCTTCCTTTACTTTACATA+AGG | 0.434540 | 5.3:-8850123 | MS.gene57202:intron |
| CAATCAAAACCTACAGAAGA+TGG | 0.439804 | 5.3:-8848289 | MS.gene57202:CDS |
| ATGACAGAAGATTATTCAGT+TGG | 0.441871 | 5.3:-8849568 | MS.gene57202:CDS |
| TGAACGGGTTGGAAAGCTAA+TGG | 0.443135 | 5.3:-8848392 | MS.gene57202:CDS |
| GAAGGTGAAGCATTTGCAAT+AGG | 0.443580 | 5.3:+8847065 | None:intergenic |
| GATGGTATTGTTACTGCTAA+AGG | 0.444847 | 5.3:-8846945 | MS.gene57202:CDS |
| CAACGGTTTGGACTGGTAAC+CGG | 0.447250 | 5.3:+8847345 | None:intergenic |
| ACTTCACTACCTCTAATTTG+AGG | 0.447292 | 5.3:+8847168 | None:intergenic |
| ACAGAAATCTCTACGAGGTT+TGG | 0.458956 | 5.3:-8849173 | MS.gene57202:intron |
| ATTTGGACATTGACATCACT+TGG | 0.463936 | 5.3:+8850152 | None:intergenic |
| TTCCTTCATATTCATTTACC+GGG | 0.478564 | 5.3:-8848537 | MS.gene57202:CDS |
| TCAGCCCACCAATCAACAAC+TGG | 0.478880 | 5.3:+8849301 | None:intergenic |
| AGACTTCGCGATGCAATGAA+TGG | 0.480374 | 5.3:-8847296 | MS.gene57202:CDS |
| TCCACAAAGTGATATTGAAC+GGG | 0.493065 | 5.3:-8848407 | MS.gene57202:CDS |
| GCTGTTCGTAATAGAGAACT+TGG | 0.494662 | 5.3:+8847321 | None:intergenic |
| ACCCGTTCAATATCACTTTG+TGG | 0.495398 | 5.3:+8848406 | None:intergenic |
| CTATACATCCCATCTTCTGT+AGG | 0.497214 | 5.3:+8848280 | None:intergenic |
| ATACCATCCAAACGTGGAAA+AGG | 0.497451 | 5.3:+8846960 | None:intergenic |
| TGTGCATAGAGCATTAGAAT+AGG | 0.499783 | 5.3:+8849193 | None:intergenic |
| TCTCCAAGTGTGGATACATT+CGG | 0.506959 | 5.3:-8849759 | MS.gene57202:CDS |
| CGAGCAGGATATATTTGGAA+AGG | 0.507201 | 5.3:-8848779 | MS.gene57202:intron |
| CACTACCTTATGTAAAGTAA+AGG | 0.508799 | 5.3:+8850118 | None:intergenic |
| GCTTGATTTGGAGAAAAGAA+TGG | 0.510077 | 5.3:-8848599 | MS.gene57202:CDS |
| ACCAAACTAAATGTATATTC+AGG | 0.522428 | 5.3:-8847242 | MS.gene57202:CDS |
| GAGTGTCGTCGATTCTTGCT+TGG | 0.523000 | 5.3:+8846912 | None:intergenic |
| AGAGACCAGTTGTTGATTGG+TGG | 0.523518 | 5.3:-8849306 | MS.gene57202:CDS |
| GTAGCACTACAAACCATTGC+AGG | 0.525179 | 5.3:-8849508 | MS.gene57202:CDS |
| GAGCAGGATATATTTGGAAA+GGG | 0.526552 | 5.3:-8848778 | MS.gene57202:intron |
| TGACAGAAGATTATTCAGTT+GGG | 0.532521 | 5.3:-8849567 | MS.gene57202:CDS |
| ACTTGGACAACGGTTTGGAC+TGG | 0.546671 | 5.3:+8847338 | None:intergenic |
| CAAAGTGATATTGAACGGGT+TGG | 0.549471 | 5.3:-8848403 | MS.gene57202:CDS |
| GTAATAGAGAACTTGGACAA+CGG | 0.549721 | 5.3:+8847328 | None:intergenic |
| TTTCCGAATGTATCCACACT+TGG | 0.551161 | 5.3:+8849756 | None:intergenic |
| GTTCGGTTTCAAAGAAACTT+GGG | 0.553017 | 5.3:-8846992 | MS.gene57202:CDS |
| CTCCACAAAGTGATATTGAA+CGG | 0.555582 | 5.3:-8848408 | MS.gene57202:CDS |
| GACGTTATTCGATGTGGACA+CGG | 0.556750 | 5.3:-8848512 | MS.gene57202:CDS |
| TCCCCGGTAAATGAATATGA+AGG | 0.559320 | 5.3:+8848535 | None:intergenic |
| AGAAGTGATAGTGGCTCTGA+GGG | 0.559917 | 5.3:-8849358 | MS.gene57202:CDS |
| CGACGACACTCTATTTCCTA+AGG | 0.562175 | 5.3:-8846900 | None:intergenic |
| TTGCTGAAATAGCCACAGAC+AGG | 0.565050 | 5.3:-8848360 | MS.gene57202:CDS |
| TTATTCAGTTGGGAACTTGG+TGG | 0.567121 | 5.3:-8849557 | MS.gene57202:CDS |
| CAAGACAAGAGCATGAAAAG+AGG | 0.570723 | 5.3:-8848738 | MS.gene57202:CDS |
| GATTGAAACAGAACCTGCAA+TGG | 0.574217 | 5.3:+8849495 | None:intergenic |
| TATAAATTTCGAGATAAATG+TGG | 0.578053 | 5.3:-8849632 | MS.gene57202:CDS |
| TAAATCAACTGTTAAATCAA+CGG | 0.578589 | 5.3:-8847108 | MS.gene57202:CDS |
| ACATCTGCAAGAAGTGATAG+TGG | 0.579198 | 5.3:-8849367 | MS.gene57202:CDS |
| CACATGCAGCTCAAAACGAC+CGG | 0.579581 | 5.3:-8847364 | MS.gene57202:CDS |
| TCGATGTGGACACGGTTCAA+AGG | 0.579585 | 5.3:-8848504 | MS.gene57202:CDS |
| CTTATAGCAATGATGGCTAG+AGG | 0.584871 | 5.3:-8849238 | MS.gene57202:CDS |
| CTATGAAAAGAACAAGTGAC+TGG | 0.585425 | 5.3:-8850323 | MS.gene57202:CDS |
| TTATAGCAATGATGGCTAGA+GGG | 0.589083 | 5.3:-8849237 | MS.gene57202:CDS |
| AATCAAAACCTACAGAAGAT+GGG | 0.590751 | 5.3:-8848288 | MS.gene57202:CDS |
| CTAGCAGCAAAATTCTGCTA+CGG | 0.592687 | 5.3:-8849655 | MS.gene57202:CDS |
| TCAAATGCTTCTGCACCACC+AGG | 0.593786 | 5.3:+8849679 | None:intergenic |
| AAGACAAGAGCATGAAAAGA+GGG | 0.596475 | 5.3:-8848737 | MS.gene57202:CDS |
| TCATCCCAATTTAAGTGACA+TGG | 0.614869 | 5.3:-8847444 | MS.gene57202:CDS |
| TAAATCAACGGTAAAATCAA+CGG | 0.622532 | 5.3:-8847096 | MS.gene57202:CDS |
| CACATCGAATAACGTCTCCC+CGG | 0.623934 | 5.3:+8848519 | None:intergenic |
| TCAGCAGAATGAGAATGAGA+AGG | 0.624756 | 5.3:+8847047 | None:intergenic |
| CATCGCTATGCTTAGATGTG+TGG | 0.625147 | 5.3:-8849605 | MS.gene57202:CDS |
| GAGACCAGTTGTTGATTGGT+GGG | 0.625912 | 5.3:-8849305 | MS.gene57202:CDS |
| TCTATCGATGCTGCTTCGTG+CGG | 0.626795 | 5.3:-8848653 | MS.gene57202:CDS |
| CGGGGAGACGTTATTCGATG+TGG | 0.628703 | 5.3:-8848518 | MS.gene57202:CDS |
| AACTGATAAATTCCTGTCTG+TGG | 0.634333 | 5.3:+8848348 | None:intergenic |
| TTTAACAGTTGATTTAAGCG+TGG | 0.636314 | 5.3:+8847115 | None:intergenic |
| AAGAAGTGATAGTGGCTCTG+AGG | 0.640367 | 5.3:-8849359 | MS.gene57202:CDS |
| TATCCATTAGTCTCCAAGTG+TGG | 0.642032 | 5.3:-8849769 | MS.gene57202:CDS |
| GTATTGTTACTGCTAAAGGT+AGG | 0.645750 | 5.3:-8846941 | MS.gene57202:CDS |
| GTACTTGCCATGGTGGATCG+TGG | 0.650434 | 5.3:-8850411 | None:intergenic |
| TCCTTCATATTCATTTACCG+GGG | 0.662655 | 5.3:-8848536 | MS.gene57202:CDS |
| CGTTCAATATCACTTTGTGG+AGG | 0.670584 | 5.3:+8848409 | None:intergenic |
| AACATCAGAGAGTTCAACGA+AGG | 0.692508 | 5.3:+8849702 | None:intergenic |
| GAACTCTCTGATGTTCCTGG+TGG | 0.699693 | 5.3:-8849694 | MS.gene57202:CDS |
| GAGTTCAACGAAGGACACGT+CGG | 0.700242 | 5.3:+8849711 | None:intergenic |
| GTAACAATACCATCCAAACG+TGG | 0.725647 | 5.3:+8846954 | None:intergenic |
| TATGCACAGAAATCTCTACG+AGG | 0.833179 | 5.3:-8849178 | MS.gene57202:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAATCTTTATATTGA+CGG | - | chr5.3:8847487-8847506 | MS.gene57202:intron | 15.0% |
| !! | TCCAAAATTAATTTAATGAT+AGG | + | chr5.3:8849342-8849361 | None:intergenic | 15.0% |
| !!! | TCCTATCATTAAATTAATTT+TGG | - | chr5.3:8849338-8849357 | MS.gene57202:CDS | 15.0% |
| !! | ACATAATTGTATTGTATGTT+TGG | - | chr5.3:8849554-8849573 | MS.gene57202:CDS | 20.0% |
| !! | TAAATCAACTGTTAAATCAA+CGG | - | chr5.3:8850196-8850215 | MS.gene57202:intron | 20.0% |
| !! | TATAAATTTCGAGATAAATG+TGG | - | chr5.3:8847672-8847691 | MS.gene57202:intron | 20.0% |
| !! | TCGAAAATCATTTATAAGTT+CGG | - | chr5.3:8850295-8850314 | MS.gene57202:CDS | 20.0% |
| !! | TTAATCAATCATAAAAACGT+AGG | + | chr5.3:8847462-8847481 | None:intergenic | 20.0% |
| !! | TTAGCAAAATCATAAAATCA+TGG | - | chr5.3:8849590-8849609 | MS.gene57202:CDS | 20.0% |
| !!! | GTAAAAATTGTAGTCATTTT+TGG | - | chr5.3:8849069-8849088 | MS.gene57202:intron | 20.0% |
| !!! | GTTAAAATTTGACAATTTTC+AGG | - | chr5.3:8849836-8849855 | MS.gene57202:intron | 20.0% |
| !!! | TAATTATAGGATTTTTTCTC+AGG | - | chr5.3:8847124-8847143 | MS.gene57202:CDS | 20.0% |
| ! | AAGATCTAGAGAATTACTTT+AGG | + | chr5.3:8849506-8849525 | None:intergenic | 25.0% |
| ! | AATAGCAGAGAAAACAAAAT+TGG | - | chr5.3:8847858-8847877 | MS.gene57202:intron | 25.0% |
| ! | AATTAAGCAATACAACTCAT+TGG | + | chr5.3:8847109-8847128 | None:intergenic | 25.0% |
| ! | AATTACCAAGAATCTCAAAT+TGG | - | chr5.3:8848832-8848851 | MS.gene57202:intron | 25.0% |
| ! | ACAATAATACATGTTTGGAA+TGG | + | chr5.3:8849734-8849753 | None:intergenic | 25.0% |
| ! | ACACTACAATAATACATGTT+TGG | + | chr5.3:8849739-8849758 | None:intergenic | 25.0% |
| ! | ACCAAACTAAATGTATATTC+AGG | - | chr5.3:8850062-8850081 | MS.gene57202:intron | 25.0% |
| ! | ACCTGAATATACATTTAGTT+TGG | + | chr5.3:8850066-8850085 | None:intergenic | 25.0% |
| ! | AGAATTGAATCTCAAAAGAA+AGG | + | chr5.3:8848476-8848495 | None:intergenic | 25.0% |
| ! | ATCATAAAAACGTAGGTAAA+AGG | + | chr5.3:8847455-8847474 | None:intergenic | 25.0% |
| ! | ATCTATTTCCATACAGAAAT+AGG | + | chr5.3:8849249-8849268 | None:intergenic | 25.0% |
| ! | ATCTTCCTTTACTTTACATA+AGG | - | chr5.3:8847181-8847200 | MS.gene57202:CDS | 25.0% |
| ! | ATTCCTTCATATTCATTTAC+CGG | - | chr5.3:8848766-8848785 | MS.gene57202:CDS | 25.0% |
| ! | GAGTTGTATTGCTTAATTAT+AGG | - | chr5.3:8847111-8847130 | MS.gene57202:CDS | 25.0% |
| ! | TAAATCAACGGTAAAATCAA+CGG | - | chr5.3:8850208-8850227 | MS.gene57202:intron | 25.0% |
| ! | TACCTTTAAATAGATGTCTA+AGG | + | chr5.3:8849052-8849071 | None:intergenic | 25.0% |
| ! | TGTAATTATATGTGTAAGTG+CGG | + | chr5.3:8848254-8848273 | None:intergenic | 25.0% |
| ! | TTTGTATAGTAACACATGTT+TGG | + | chr5.3:8849698-8849717 | None:intergenic | 25.0% |
| !! | CTATAAGAACTCTTTGAAAA+AGG | + | chr5.3:8848053-8848072 | None:intergenic | 25.0% |
| !! | GAACTTATAAATGATTTTCG+AGG | + | chr5.3:8850296-8850315 | None:intergenic | 25.0% |
| !!! | AATTTTGTTTTCTCTGCTAT+TGG | + | chr5.3:8847859-8847878 | None:intergenic | 25.0% |
| !!! | TCTAAGTGGTAGTTTTAAAA+CGG | + | chr5.3:8849192-8849211 | None:intergenic | 25.0% |
| !!! | TGTGAAATTTGTGTTGTTTT+TGG | - | chr5.3:8849633-8849652 | MS.gene57202:CDS | 25.0% |
| !!! | TGTTGTTTTTGGCAAAATTA+TGG | - | chr5.3:8849644-8849663 | MS.gene57202:CDS | 25.0% |
| !!! | TTTCTATCTTCTTTTAGAGA+GGG | + | chr5.3:8848163-8848182 | None:intergenic | 25.0% |
| !!! | TTTTCTATCTTCTTTTAGAG+AGG | + | chr5.3:8848164-8848183 | None:intergenic | 25.0% |
| AAAAGAATGGCAATGCAATT+AGG | - | chr5.3:8848718-8848737 | MS.gene57202:CDS | 30.0% | |
| AAAGAAAGTTTGCAGCATAA+TGG | - | chr5.3:8849887-8849906 | MS.gene57202:intron | 30.0% | |
| AAATGAAGACCTCAAATTAG+AGG | - | chr5.3:8850127-8850146 | MS.gene57202:CDS | 30.0% | |
| AAGAGTTCTTATAGCAATGA+TGG | - | chr5.3:8848059-8848078 | MS.gene57202:intron | 30.0% | |
| AATCAAAACCTACAGAAGAT+GGG | - | chr5.3:8849016-8849035 | MS.gene57202:intron | 30.0% | |
| ACTTATGAATCTCGATCATT+TGG | + | chr5.3:8849395-8849414 | None:intergenic | 30.0% | |
| AGCCTTAGACATCTATTTAA+AGG | - | chr5.3:8849047-8849066 | MS.gene57202:intron | 30.0% | |
| ATGACAGAAGATTATTCAGT+TGG | - | chr5.3:8847736-8847755 | MS.gene57202:intron | 30.0% | |
| ATTTCCATACAGAAATAGGA+AGG | + | chr5.3:8849245-8849264 | None:intergenic | 30.0% | |
| CACTACCTTATGTAAAGTAA+AGG | + | chr5.3:8847189-8847208 | None:intergenic | 30.0% | |
| GAGACAATTCATATTCTAAG+TGG | + | chr5.3:8849206-8849225 | None:intergenic | 30.0% | |
| GCAAAATCATAAAATCATGG+TGG | - | chr5.3:8849593-8849612 | MS.gene57202:CDS | 30.0% | |
| GGAAATCACTTTGTCTATAA+TGG | - | chr5.3:8848853-8848872 | MS.gene57202:intron | 30.0% | |
| GTAATTATATGTGTAAGTGC+GGG | + | chr5.3:8848253-8848272 | None:intergenic | 30.0% | |
| TAAAGGAAGATTCTCCAATT+TGG | + | chr5.3:8847172-8847191 | None:intergenic | 30.0% | |
| TAATGATAGGAAAACACAAG+TGG | + | chr5.3:8849329-8849348 | None:intergenic | 30.0% | |
| TGACAGAAGATTATTCAGTT+GGG | - | chr5.3:8847737-8847756 | MS.gene57202:intron | 30.0% | |
| TTCCTTCATATTCATTTACC+GGG | - | chr5.3:8848767-8848786 | MS.gene57202:CDS | 30.0% | |
| TTGAAAGCAAGATGTATATG+CGG | - | chr5.3:8847381-8847400 | MS.gene57202:CDS | 30.0% | |
| ! | CATTCTTCTCTTTTGGTAAA+AGG | + | chr5.3:8848615-8848634 | None:intergenic | 30.0% |
| ! | CTTCTTTTCTTTTGCAAACA+AGG | + | chr5.3:8848349-8848368 | None:intergenic | 30.0% |
| ! | GATTTCCAATTTGAGATTCT+TGG | + | chr5.3:8848840-8848859 | None:intergenic | 30.0% |
| ! | TTTAACAGTTGATTTAAGCG+TGG | + | chr5.3:8850192-8850211 | None:intergenic | 30.0% |
| !! | AATTGCTTTTATTGCTTGCA+AGG | - | chr5.3:8847900-8847919 | MS.gene57202:intron | 30.0% |
| !! | ATAAATGATTTTCGAGGTAG+TGG | + | chr5.3:8850290-8850309 | None:intergenic | 30.0% |
| !! | TATTGTTTGCTACCTTTTGT+TGG | - | chr5.3:8847068-8847087 | MS.gene57202:CDS | 30.0% |
| !! | TTTAGTTTGGTGTGAATAGA+AGG | + | chr5.3:8850053-8850072 | None:intergenic | 30.0% |
| !!! | ATTTTTTCTTTCTTTCGAGC+AGG | - | chr5.3:8848510-8848529 | MS.gene57202:CDS | 30.0% |
| !!! | TGGTAGTTTTAAAACGGATT+TGG | + | chr5.3:8849186-8849205 | None:intergenic | 30.0% |
| AACTGATAAATTCCTGTCTG+TGG | + | chr5.3:8848959-8848978 | None:intergenic | 35.0% | |
| ACTTCACTACCTCTAATTTG+AGG | + | chr5.3:8850139-8850158 | None:intergenic | 35.0% | |
| AGATTATTCAGTTGGGAACT+TGG | - | chr5.3:8847744-8847763 | MS.gene57202:intron | 35.0% | |
| AGTCATGCAATCATAGATCT+CGG | - | chr5.3:8849124-8849143 | MS.gene57202:intron | 35.0% | |
| AGTGATGTCAATGTCCAAAT+TGG | - | chr5.3:8847155-8847174 | MS.gene57202:CDS | 35.0% | |
| AGTTCGGTTTCAAAGAAACT+TGG | - | chr5.3:8850311-8850330 | MS.gene57202:CDS | 35.0% | |
| ATCTCGGTACGATGAAAATT+GGG | - | chr5.3:8849140-8849159 | MS.gene57202:intron | 35.0% | |
| ATTTGGACATTGACATCACT+TGG | + | chr5.3:8847155-8847174 | None:intergenic | 35.0% | |
| CAATCAAAACCTACAGAAGA+TGG | - | chr5.3:8849015-8849034 | MS.gene57202:intron | 35.0% | |
| CTATGAAAAGAACAAGTGAC+TGG | - | chr5.3:8846981-8847000 | MS.gene57202:CDS | 35.0% | |
| CTCCACAAAGTGATATTGAA+CGG | - | chr5.3:8848896-8848915 | MS.gene57202:intron | 35.0% | |
| GAGCAGGATATATTTGGAAA+GGG | - | chr5.3:8848526-8848545 | MS.gene57202:CDS | 35.0% | |
| GATGATGTTCATATCTGTGT+CGG | - | chr5.3:8848303-8848322 | MS.gene57202:CDS | 35.0% | |
| GATGGTATTGTTACTGCTAA+AGG | - | chr5.3:8850359-8850378 | MS.gene57202:CDS | 35.0% | |
| GTAATAGAGAACTTGGACAA+CGG | + | chr5.3:8849979-8849998 | None:intergenic | 35.0% | |
| GTATTGTTACTGCTAAAGGT+AGG | - | chr5.3:8850363-8850382 | MS.gene57202:CDS | 35.0% | |
| GTGGTTCAATCTTCATTCAA+TGG | + | chr5.3:8849310-8849329 | None:intergenic | 35.0% | |
| GTTCGGTTTCAAAGAAACTT+GGG | - | chr5.3:8850312-8850331 | MS.gene57202:CDS | 35.0% | |
| TCATAAAATCATGGTGGCAT+CGG | - | chr5.3:8849599-8849618 | MS.gene57202:CDS | 35.0% | |
| TCATCCCAATTTAAGTGACA+TGG | - | chr5.3:8849860-8849879 | MS.gene57202:intron | 35.0% | |
| TCCACAAAGTGATATTGAAC+GGG | - | chr5.3:8848897-8848916 | MS.gene57202:intron | 35.0% | |
| TCCTTCATATTCATTTACCG+GGG | - | chr5.3:8848768-8848787 | MS.gene57202:CDS | 35.0% | |
| TCTTTCGAGCAGGATATATT+TGG | - | chr5.3:8848520-8848539 | MS.gene57202:CDS | 35.0% | |
| TTATAGCAATGATGGCTAGA+GGG | - | chr5.3:8848067-8848086 | MS.gene57202:intron | 35.0% | |
| TTCTGTCATCTCGAGATATT+CGG | + | chr5.3:8847725-8847744 | None:intergenic | 35.0% | |
| ! | AAGACAAGAGCATGAAAAGA+GGG | - | chr5.3:8848567-8848586 | MS.gene57202:CDS | 35.0% |
| ! | CTCTCCATGTCACTTAAATT+GGG | + | chr5.3:8849867-8849886 | None:intergenic | 35.0% |
| ! | GACATTGCATTCTTCTCTTT+TGG | + | chr5.3:8848622-8848641 | None:intergenic | 35.0% |
| ! | GCTACCTTTTGTTGGATTTA+GGG | - | chr5.3:8847076-8847095 | MS.gene57202:CDS | 35.0% |
| ! | TCTCTCCATGTCACTTAAAT+TGG | + | chr5.3:8849868-8849887 | None:intergenic | 35.0% |
| ! | TGCTACCTTTTGTTGGATTT+AGG | - | chr5.3:8847075-8847094 | MS.gene57202:CDS | 35.0% |
| ! | TGTGCATAGAGCATTAGAAT+AGG | + | chr5.3:8848114-8848133 | None:intergenic | 35.0% |
| ! | TTTTCTCTGCTATTGGAAGA+AGG | + | chr5.3:8847852-8847871 | None:intergenic | 35.0% |
| !! | GCTTGATTTGGAGAAAAGAA+TGG | - | chr5.3:8848705-8848724 | MS.gene57202:CDS | 35.0% |
| !! | GGGTTTAAACAGTTTGCTAT+TGG | - | chr5.3:8848087-8848106 | MS.gene57202:intron | 35.0% |
| !! | TAAAACGGATTTGGTGAAGT+TGG | + | chr5.3:8849177-8849196 | None:intergenic | 35.0% |
| !! | TTCTCCTTCCTATTTCTGTA+TGG | - | chr5.3:8849238-8849257 | MS.gene57202:CDS | 35.0% |
| !!! | TCTGTAGGTTTTGATTGTTC+AGG | + | chr5.3:8849012-8849031 | None:intergenic | 35.0% |
| AACAGAGACCAGTTGTTGAT+TGG | - | chr5.3:8847995-8848014 | MS.gene57202:intron | 40.0% | |
| AACATCAGAGAGTTCAACGA+AGG | + | chr5.3:8847605-8847624 | None:intergenic | 40.0% | |
| ACAGAAATCTCTACGAGGTT+TGG | - | chr5.3:8848131-8848150 | MS.gene57202:intron | 40.0% | |
| ACATCTGCAAGAAGTGATAG+TGG | - | chr5.3:8847937-8847956 | MS.gene57202:intron | 40.0% | |
| ACCCGTTCAATATCACTTTG+TGG | + | chr5.3:8848901-8848920 | None:intergenic | 40.0% | |
| ATACCATCCAAACGTGGAAA+AGG | + | chr5.3:8850347-8850366 | None:intergenic | 40.0% | |
| CAAAGTGATATTGAACGGGT+TGG | - | chr5.3:8848901-8848920 | MS.gene57202:intron | 40.0% | |
| CAGTCCCTAAATCCAACAAA+AGG | + | chr5.3:8847083-8847102 | None:intergenic | 40.0% | |
| CGAGCAGGATATATTTGGAA+AGG | - | chr5.3:8848525-8848544 | MS.gene57202:CDS | 40.0% | |
| CGTTCAATATCACTTTGTGG+AGG | + | chr5.3:8848898-8848917 | None:intergenic | 40.0% | |
| CTAGCAGCAAAATTCTGCTA+CGG | - | chr5.3:8847649-8847668 | MS.gene57202:intron | 40.0% | |
| CTATACATCCCATCTTCTGT+AGG | + | chr5.3:8849027-8849046 | None:intergenic | 40.0% | |
| CTTATAGCAATGATGGCTAG+AGG | - | chr5.3:8848066-8848085 | MS.gene57202:intron | 40.0% | |
| GATCTCGGTACGATGAAAAT+TGG | - | chr5.3:8849139-8849158 | MS.gene57202:intron | 40.0% | |
| GATTGAAACAGAACCTGCAA+TGG | + | chr5.3:8847812-8847831 | None:intergenic | 40.0% | |
| GCTGTTCGTAATAGAGAACT+TGG | + | chr5.3:8849986-8850005 | None:intergenic | 40.0% | |
| GTAACAATACCATCCAAACG+TGG | + | chr5.3:8850353-8850372 | None:intergenic | 40.0% | |
| TATCCACACTTGGAGACTAA+TGG | + | chr5.3:8847541-8847560 | None:intergenic | 40.0% | |
| TATGCACAGAAATCTCTACG+AGG | - | chr5.3:8848126-8848145 | MS.gene57202:intron | 40.0% | |
| TCAGCAGAATGAGAATGAGA+AGG | + | chr5.3:8850260-8850279 | None:intergenic | 40.0% | |
| TCCCCGGTAAATGAATATGA+AGG | + | chr5.3:8848772-8848791 | None:intergenic | 40.0% | |
| TCTCCAAGTGTGGATACATT+CGG | - | chr5.3:8847545-8847564 | MS.gene57202:intron | 40.0% | |
| TTATTCAGTTGGGAACTTGG+TGG | - | chr5.3:8847747-8847766 | MS.gene57202:intron | 40.0% | |
| TTGATACAACAGTTGCTTGC+AGG | - | chr5.3:8848683-8848702 | MS.gene57202:CDS | 40.0% | |
| TTTCCGAATGTATCCACACT+TGG | + | chr5.3:8847551-8847570 | None:intergenic | 40.0% | |
| ! | CAAGACAAGAGCATGAAAAG+AGG | - | chr5.3:8848566-8848585 | MS.gene57202:CDS | 40.0% |
| ! | CTCTTTTCATGCTCTTGTCT+TGG | + | chr5.3:8848568-8848587 | None:intergenic | 40.0% |
| ! | GAAGGTGAAGCATTTGCAAT+AGG | + | chr5.3:8850242-8850261 | None:intergenic | 40.0% |
| ! | TATCCATTAGTCTCCAAGTG+TGG | - | chr5.3:8847535-8847554 | MS.gene57202:intron | 40.0% |
| !! | AATGATTTTCGAGGTAGTGG+AGG | + | chr5.3:8850287-8850306 | None:intergenic | 40.0% |
| !! | CAGTGACTATGAGAGTATTC+GGG | - | chr5.3:8849416-8849435 | MS.gene57202:CDS | 40.0% |
| !! | GCAGTGACTATGAGAGTATT+CGG | - | chr5.3:8849415-8849434 | MS.gene57202:CDS | 40.0% |
| !!! | TGTTTTGTTGTTCCAACGAG+AGG | + | chr5.3:8849444-8849463 | None:intergenic | 40.0% |
| AGACTTCGCGATGCAATGAA+TGG | - | chr5.3:8850008-8850027 | MS.gene57202:intron | 45.0% | |
| AGAGAACTTGGACAACGGTT+TGG | + | chr5.3:8849974-8849993 | None:intergenic | 45.0% | |
| AGTTGCTTGCAGGCTTGATT+TGG | - | chr5.3:8848693-8848712 | MS.gene57202:CDS | 45.0% | |
| CAACACTAACACGTAGACAG+TGG | + | chr5.3:8848282-8848301 | None:intergenic | 45.0% | |
| CATCGCTATGCTTAGATGTG+TGG | - | chr5.3:8847699-8847718 | MS.gene57202:intron | 45.0% | |
| GACGTTATTCGATGTGGACA+CGG | - | chr5.3:8848792-8848811 | MS.gene57202:intron | 45.0% | |
| GCAACAGACACAACTTGTGT+CGG | + | chr5.3:8848231-8848250 | None:intergenic | 45.0% | |
| GTAGCACTACAAACCATTGC+AGG | - | chr5.3:8847796-8847815 | MS.gene57202:intron | 45.0% | |
| GTTGAACTCTCTGATGTTCC+TGG | - | chr5.3:8847607-8847626 | MS.gene57202:intron | 45.0% | |
| TTGCTGAAATAGCCACAGAC+AGG | - | chr5.3:8848944-8848963 | MS.gene57202:intron | 45.0% | |
| ! | AGAGACCAGTTGTTGATTGG+TGG | - | chr5.3:8847998-8848017 | MS.gene57202:intron | 45.0% |
| ! | GAGACCAGTTGTTGATTGGT+GGG | - | chr5.3:8847999-8848018 | MS.gene57202:intron | 45.0% |
| ! | GCTTTCTCCTTTTCCACGTT+TGG | - | chr5.3:8850337-8850356 | MS.gene57202:CDS | 45.0% |
| ! | TATCTGTGTCGGTGCTTCAT+AGG | - | chr5.3:8848314-8848333 | MS.gene57202:CDS | 45.0% |
| ! | TCTCCTTTTCCACGTTTGGA+TGG | - | chr5.3:8850341-8850360 | MS.gene57202:CDS | 45.0% |
| !! | AAGAAGTGATAGTGGCTCTG+AGG | - | chr5.3:8847945-8847964 | MS.gene57202:intron | 45.0% |
| !! | AGAAGTGATAGTGGCTCTGA+GGG | - | chr5.3:8847946-8847965 | MS.gene57202:intron | 45.0% |
| !! | TGAACGGGTTGGAAAGCTAA+TGG | - | chr5.3:8848912-8848931 | MS.gene57202:intron | 45.0% |
| AGTATTCGGGTACCTCTCGT+TGG | - | chr5.3:8849429-8849448 | MS.gene57202:CDS | 50.0% | |
| CACATCGAATAACGTCTCCC+CGG | + | chr5.3:8848788-8848807 | None:intergenic | 50.0% | |
| CACATGCAGCTCAAAACGAC+CGG | - | chr5.3:8849940-8849959 | MS.gene57202:intron | 50.0% | |
| GAACTCTCTGATGTTCCTGG+TGG | - | chr5.3:8847610-8847629 | MS.gene57202:intron | 50.0% | |
| GAGTTCAACGAAGGACACGT+CGG | + | chr5.3:8847596-8847615 | None:intergenic | 50.0% | |
| TCAAATGCTTCTGCACCACC+AGG | + | chr5.3:8847628-8847647 | None:intergenic | 50.0% | |
| TCAGCCCACCAATCAACAAC+TGG | + | chr5.3:8848006-8848025 | None:intergenic | 50.0% | |
| TCGATGTGGACACGGTTCAA+AGG | - | chr5.3:8848800-8848819 | MS.gene57202:intron | 50.0% | |
| ! | ACTTGGACAACGGTTTGGAC+TGG | + | chr5.3:8849969-8849988 | None:intergenic | 50.0% |
| ! | TCTATCGATGCTGCTTCGTG+CGG | - | chr5.3:8848651-8848670 | MS.gene57202:CDS | 50.0% |
| !! | CAACGGTTTGGACTGGTAAC+CGG | + | chr5.3:8849962-8849981 | None:intergenic | 50.0% |
| !! | GAGTGTCGTCGATTCTTGCT+TGG | + | chr5.3:8850395-8850414 | None:intergenic | 50.0% |
| CGGGGAGACGTTATTCGATG+TGG | - | chr5.3:8848786-8848805 | MS.gene57202:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 8846902 | 8850424 | 8846902 | ID=MS.gene57202 |
| chr5.3 | mRNA | 8846902 | 8850424 | 8846902 | ID=MS.gene57202.t1;Parent=MS.gene57202 |
| chr5.3 | exon | 8850267 | 8850424 | 8850267 | ID=MS.gene57202.t1.exon1;Parent=MS.gene57202.t1 |
| chr5.3 | CDS | 8850267 | 8850424 | 8850267 | ID=cds.MS.gene57202.t1;Parent=MS.gene57202.t1 |
| chr5.3 | exon | 8850124 | 8850193 | 8850124 | ID=MS.gene57202.t1.exon2;Parent=MS.gene57202.t1 |
| chr5.3 | CDS | 8850124 | 8850193 | 8850124 | ID=cds.MS.gene57202.t1;Parent=MS.gene57202.t1 |
| chr5.3 | exon | 8849174 | 8849791 | 8849174 | ID=MS.gene57202.t1.exon3;Parent=MS.gene57202.t1 |
| chr5.3 | CDS | 8849174 | 8849791 | 8849174 | ID=cds.MS.gene57202.t1;Parent=MS.gene57202.t1 |
| chr5.3 | exon | 8848258 | 8848794 | 8848258 | ID=MS.gene57202.t1.exon4;Parent=MS.gene57202.t1 |
| chr5.3 | CDS | 8848258 | 8848794 | 8848258 | ID=cds.MS.gene57202.t1;Parent=MS.gene57202.t1 |
| chr5.3 | exon | 8846902 | 8847468 | 8846902 | ID=MS.gene57202.t1.exon5;Parent=MS.gene57202.t1 |
| chr5.3 | CDS | 8846902 | 8847468 | 8846902 | ID=cds.MS.gene57202.t1;Parent=MS.gene57202.t1 |
| Gene Sequence |
| Protein sequence |
