Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58503.t1 | XP_003609668.1 | 95.2 | 210 | 10 | 0 | 16 | 225 | 1 | 210 | 1.40E-113 | 419.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58503.t1 | Q8PWU0 | 29.7 | 219 | 134 | 8 | 23 | 237 | 511 | 713 | 1.3e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58503.t1 | G7JLH0 | 95.2 | 210 | 10 | 0 | 16 | 225 | 1 | 210 | 1.0e-113 | 419.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene58503 | 0.831674 | 1.46E-55 | -1.69E-46 |
| MS.gene049151 | MS.gene58503 | 0.812328 | 4.48E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene58503 | 0.831152 | 1.96E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene58503 | 0.827647 | 1.39E-54 | -1.69E-46 |
| MS.gene049260 | MS.gene58503 | 0.812401 | 4.32E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene58503 | 0.828448 | 8.94E-55 | -1.69E-46 |
| MS.gene049435 | MS.gene58503 | 0.846408 | 2.21E-59 | -1.69E-46 |
| MS.gene050105 | MS.gene58503 | 0.819255 | 1.28E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene58503 | 0.848033 | 7.93E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene58503 | 0.831533 | 1.58E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene58503 | 0.843039 | 1.79E-58 | -1.69E-46 |
| MS.gene050442 | MS.gene58503 | 0.844095 | 9.35E-59 | -1.69E-46 |
| MS.gene050605 | MS.gene58503 | 0.859861 | 3.09E-63 | -1.69E-46 |
| MS.gene050623 | MS.gene58503 | -0.844203 | 8.74E-59 | -1.69E-46 |
| MS.gene050642 | MS.gene58503 | 0.836808 | 7.53E-57 | -1.69E-46 |
| MS.gene050680 | MS.gene58503 | 0.851523 | 8.40E-61 | -1.69E-46 |
| MS.gene050750 | MS.gene58503 | 0.847059 | 1.47E-59 | -1.69E-46 |
| MS.gene050759 | MS.gene58503 | 0.80156 | 8.50E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene58503 | 0.833231 | 6.00E-56 | -1.69E-46 |
| MS.gene050987 | MS.gene58503 | 0.823545 | 1.31E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene58503 | 0.805832 | 1.10E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene58503 | 0.869375 | 3.25E-66 | -1.69E-46 |
| MS.gene051370 | MS.gene58503 | 0.807717 | 4.41E-50 | -1.69E-46 |
| MS.gene051373 | MS.gene58503 | 0.814388 | 1.58E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene58503 | 0.83341 | 5.42E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene58503 | 0.810735 | 9.94E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene58503 | 0.849603 | 2.91E-60 | -1.69E-46 |
| MS.gene05215 | MS.gene58503 | 0.800294 | 1.54E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene58503 | 0.841062 | 5.97E-58 | -1.69E-46 |
| MS.gene052426 | MS.gene58503 | 0.837535 | 4.91E-57 | -1.69E-46 |
| MS.gene052674 | MS.gene58503 | 0.804368 | 2.23E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene58503 | 0.80651 | 7.94E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene58503 | 0.812968 | 3.25E-51 | -1.69E-46 |
| MS.gene05288 | MS.gene58503 | 0.80398 | 2.69E-49 | -1.69E-46 |
| MS.gene05289 | MS.gene58503 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene58503 | 0.80074 | 1.25E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene58503 | 0.829717 | 4.40E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene58503 | 0.812034 | 5.19E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene58503 | 0.862209 | 5.96E-64 | -1.69E-46 |
| MS.gene053494 | MS.gene58503 | 0.828008 | 1.14E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene58503 | 0.80137 | 9.30E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene58503 | -0.805598 | 1.24E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene58503 | 0.812644 | 3.82E-51 | -1.69E-46 |
| MS.gene054405 | MS.gene58503 | 0.826053 | 3.35E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene58503 | 0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene58503 | 0.858828 | 6.30E-63 | -1.69E-46 |
| MS.gene054657 | MS.gene58503 | 0.839348 | 1.67E-57 | -1.69E-46 |
| MS.gene054658 | MS.gene58503 | 0.8145 | 1.49E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene58503 | 0.814148 | 1.79E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene58503 | 0.857151 | 1.98E-62 | -1.69E-46 |
| MS.gene055356 | MS.gene58503 | 0.843257 | 1.57E-58 | -1.69E-46 |
| MS.gene055358 | MS.gene58503 | 0.837771 | 4.27E-57 | -1.69E-46 |
| MS.gene055367 | MS.gene58503 | 0.839866 | 1.23E-57 | -1.69E-46 |
| MS.gene055701 | MS.gene58503 | 0.887126 | 1.88E-72 | -1.69E-46 |
| MS.gene055926 | MS.gene58503 | 0.816174 | 6.33E-52 | -1.69E-46 |
| MS.gene05595 | MS.gene58503 | 0.800668 | 1.29E-48 | -1.69E-46 |
| MS.gene056480 | MS.gene58503 | 0.814093 | 1.84E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene58503 | 0.856435 | 3.22E-62 | -1.69E-46 |
| MS.gene056979 | MS.gene58503 | 0.849181 | 3.81E-60 | -1.69E-46 |
| MS.gene057060 | MS.gene58503 | 0.805895 | 1.07E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene58503 | -0.844669 | 6.55E-59 | -1.69E-46 |
| MS.gene057200 | MS.gene58503 | 0.823064 | 1.69E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene58503 | 0.811256 | 7.67E-51 | -1.69E-46 |
| MS.gene057750 | MS.gene58503 | 0.803573 | 3.27E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene58503 | 0.811887 | 5.59E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene58503 | 0.836512 | 8.96E-57 | -1.69E-46 |
| MS.gene058399 | MS.gene58503 | 0.807259 | 5.52E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene58503 | 0.845666 | 3.52E-59 | -1.69E-46 |
| MS.gene058548 | MS.gene58503 | 0.835891 | 1.29E-56 | -1.69E-46 |
| MS.gene058549 | MS.gene58503 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene58503 | 0.860605 | 1.84E-63 | -1.69E-46 |
| MS.gene058979 | MS.gene58503 | 0.812982 | 3.22E-51 | -1.69E-46 |
| MS.gene059128 | MS.gene58503 | 0.83465 | 2.65E-56 | -1.69E-46 |
| MS.gene059160 | MS.gene58503 | 0.802962 | 4.37E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene58503 | 0.862315 | 5.53E-64 | -1.69E-46 |
| MS.gene059162 | MS.gene58503 | 0.818755 | 1.66E-52 | -1.69E-46 |
| MS.gene059306 | MS.gene58503 | 0.805622 | 1.22E-49 | -1.69E-46 |
| MS.gene059569 | MS.gene58503 | 0.804069 | 2.58E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene58503 | 0.814444 | 1.54E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene58503 | 0.867284 | 1.53E-65 | -1.69E-46 |
| MS.gene05979 | MS.gene58503 | 0.842727 | 2.17E-58 | -1.69E-46 |
| MS.gene059842 | MS.gene58503 | 0.800412 | 1.46E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene58503 | 0.839255 | 1.77E-57 | -1.69E-46 |
| MS.gene060137 | MS.gene58503 | -0.827925 | 1.20E-54 | -1.69E-46 |
| MS.gene060310 | MS.gene58503 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene58503 | 0.844306 | 8.20E-59 | -1.69E-46 |
| MS.gene06052 | MS.gene58503 | 0.80454 | 2.06E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene58503 | 0.857368 | 1.71E-62 | -1.69E-46 |
| MS.gene060685 | MS.gene58503 | 0.851648 | 7.74E-61 | -1.69E-46 |
| MS.gene060802 | MS.gene58503 | 0.887524 | 1.32E-72 | -1.69E-46 |
| MS.gene060803 | MS.gene58503 | 0.846328 | 2.33E-59 | -1.69E-46 |
| MS.gene060998 | MS.gene58503 | 0.825095 | 5.65E-54 | -1.69E-46 |
| MS.gene061114 | MS.gene58503 | -0.842207 | 2.98E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78610 | MS.gene58503 | PPI |
| MS.gene55353 | MS.gene58503 | PPI |
| MS.gene85927 | MS.gene58503 | PPI |
| MS.gene58503 | MS.gene53154 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58503.t1 | MTR_4g119840 | 93.519 | 216 | 12 | 1 | 16 | 231 | 1 | 214 | 7.55e-149 | 415 |
| MS.gene58503.t1 | MTR_4g123440 | 81.746 | 126 | 18 | 2 | 7 | 132 | 15 | 135 | 6.66e-64 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58503.t1 | AT3G16565 | 65.714 | 210 | 72 | 0 | 18 | 227 | 1 | 210 | 1.00e-96 | 281 |
| MS.gene58503.t1 | AT3G16565 | 66.346 | 208 | 70 | 0 | 18 | 225 | 1 | 208 | 2.49e-95 | 280 |
| MS.gene58503.t1 | AT3G16565 | 66.346 | 208 | 70 | 0 | 18 | 225 | 1 | 208 | 2.49e-95 | 280 |
| MS.gene58503.t1 | AT3G16565 | 66.346 | 208 | 70 | 0 | 18 | 225 | 1 | 208 | 2.77e-95 | 279 |
| MS.gene58503.t1 | AT3G16565 | 56.379 | 243 | 73 | 1 | 18 | 227 | 1 | 243 | 3.49e-88 | 261 |
| MS.gene58503.t1 | AT3G16565 | 56.846 | 241 | 71 | 1 | 18 | 225 | 1 | 241 | 7.86e-87 | 259 |
Find 49 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGAGAAAATTAAATTCT+AGG | 0.300109 | 8.4:+12088876 | MS.gene58503:CDS |
| GCAAAAGGAGTTGGAGTTAG+AGG | 0.349791 | 8.4:+12092651 | MS.gene58503:CDS |
| GGGTATGGGAGGGGAGTTTG+AGG | 0.352926 | 8.4:+12088808 | MS.gene58503:CDS |
| TTGTATTGTTTCCAGGCCTT+GGG | 0.357304 | 8.4:+12092585 | MS.gene58503:intron |
| CACTATCTGTTGATGAGAAC+AGG | 0.362606 | 8.4:+12088858 | MS.gene58503:CDS |
| AGGCCTTGGGTTGAATATAA+AGG | 0.378624 | 8.4:+12092598 | MS.gene58503:intron |
| TACTGTTATTTCGCCTGTAT+TGG | 0.385523 | 8.4:-12093067 | None:intergenic |
| ACACAGAGTCGCGCCGCTTC+TGG | 0.389499 | 8.4:+12088324 | MS.gene58503:intron |
| AATGTTGGATAGGGAGTTGA+TGG | 0.397558 | 8.4:+12088539 | MS.gene58503:intron |
| TTATTTCGCCTGTATTGGTT+TGG | 0.401343 | 8.4:-12093062 | None:intergenic |
| TTGTGCAGGTTGCACTCAGC+AGG | 0.415733 | 8.4:+12089391 | MS.gene58503:intron |
| GGCTAATGCTTTAATTTCCA+TGG | 0.419548 | 8.4:+12092672 | MS.gene58503:CDS |
| TAGTAGGGTGGTGGTGGAGA+TGG | 0.436792 | 8.4:+12088354 | MS.gene58503:CDS |
| CGCTTCTGGAATTGAGTAGT+AGG | 0.443076 | 8.4:+12088338 | MS.gene58503:CDS |
| TGTTGTAACCAAACCAATAC+AGG | 0.452114 | 8.4:+12093054 | MS.gene58503:CDS |
| ATTGGTTTGGTTACAACAGC+TGG | 0.456066 | 8.4:-12093049 | None:intergenic |
| TCTTCCTGATTATGTTCCTA+AGG | 0.460059 | 8.4:+12092830 | MS.gene58503:CDS |
| TCATAGTAATCCAGCTTTGT+GGG | 0.461839 | 8.4:-12088385 | None:intergenic |
| CTGACCTTAGGAACATAATC+AGG | 0.469308 | 8.4:-12092834 | None:intergenic |
| ATTGAGTAGTAGGGTGGTGG+TGG | 0.470645 | 8.4:+12088348 | MS.gene58503:CDS |
| GGTGGTCAGCCGGCAGACAC+TGG | 0.478361 | 8.4:+12088608 | MS.gene58503:CDS |
| GATGAAGCTGCTAAGCTTTG+CGG | 0.483576 | 8.4:+12092801 | MS.gene58503:CDS |
| ATCATAGTAATCCAGCTTTG+TGG | 0.484891 | 8.4:-12088386 | None:intergenic |
| GGATTGGGTCATTTAGAGCC+TGG | 0.485368 | 8.4:+12089445 | MS.gene58503:CDS |
| GGACAAGAGTCCCACAAAGC+TGG | 0.491664 | 8.4:+12088375 | MS.gene58503:CDS |
| GGAATTGAGTAGTAGGGTGG+TGG | 0.500789 | 8.4:+12088345 | MS.gene58503:CDS |
| TCCACAAGGTGGTGGTCAGC+CGG | 0.501169 | 8.4:+12088598 | MS.gene58503:CDS |
| TGAAATGCAGAATAAGCAAA+AGG | 0.506242 | 8.4:+12092636 | MS.gene58503:CDS |
| GCAGAATAAGCAAAAGGAGT+TGG | 0.508258 | 8.4:+12092642 | MS.gene58503:CDS |
| AATGATGTTCGATCAAAAGA+TGG | 0.510552 | 8.4:+12088671 | MS.gene58503:CDS |
| GCTAATGCTTTAATTTCCAT+GGG | 0.522601 | 8.4:+12092673 | MS.gene58503:CDS |
| ATTAAGAATCCAGTGTCTGC+CGG | 0.535034 | 8.4:-12088617 | None:intergenic |
| TTTGAGGGCACACTAGAGAA+AGG | 0.539934 | 8.4:+12088824 | MS.gene58503:CDS |
| GCCGGCTGACCACCACCTTG+TGG | 0.552800 | 8.4:-12088599 | None:intergenic |
| CTACTACTCAATTCCAGAAG+CGG | 0.562050 | 8.4:-12088337 | None:intergenic |
| GCTTCTGGAATTGAGTAGTA+GGG | 0.580690 | 8.4:+12088339 | MS.gene58503:CDS |
| TTGAGGGCACACTAGAGAAA+GGG | 0.582796 | 8.4:+12088825 | MS.gene58503:CDS |
| GGTATGGGAGGGGAGTTTGA+GGG | 0.586173 | 8.4:+12088809 | MS.gene58503:CDS |
| AATGCTTTAATTTCCATGGG+AGG | 0.590708 | 8.4:+12092676 | MS.gene58503:CDS |
| ACACCTTTATATTCAACCCA+AGG | 0.592850 | 8.4:-12092601 | None:intergenic |
| CACACTAGAGAAAGGGAAGG+AGG | 0.602321 | 8.4:+12088832 | MS.gene58503:CDS |
| TGTGCAGGTTGCACTCAGCA+GGG | 0.621231 | 8.4:+12089392 | MS.gene58503:intron |
| TTGGATAGGGAGTTGATGGG+AGG | 0.650473 | 8.4:+12088543 | MS.gene58503:intron |
| ATGTTGGATAGGGAGTTGAT+GGG | 0.656979 | 8.4:+12088540 | MS.gene58503:intron |
| TCTGGAATTGAGTAGTAGGG+TGG | 0.675668 | 8.4:+12088342 | MS.gene58503:CDS |
| GGGCACACTAGAGAAAGGGA+AGG | 0.695674 | 8.4:+12088829 | MS.gene58503:CDS |
| TGGATTACTATGATGACATG+TGG | 0.702198 | 8.4:+12088395 | MS.gene58503:CDS |
| GAAGCTGCTAAGCTTTGCGG+TGG | 0.707621 | 8.4:+12092804 | MS.gene58503:CDS |
| TTTGAAGTGAGAGACAAGTG+TGG | 0.744281 | 8.4:-12088434 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTTTATTTTTATTT+TGG | + | chr8.4:12088498-12088517 | MS.gene58503:intron | 0.0% |
| !!! | AATTTTACATATTGTTAAAA+AGG | - | chr8.4:12091200-12091219 | None:intergenic | 10.0% |
| !! | AAAATTAAACCAATTTATGT+CGG | - | chr8.4:12090114-12090133 | None:intergenic | 15.0% |
| !! | AAACTTAATTAGTTAAGATA+AGG | + | chr8.4:12091414-12091433 | MS.gene58503:intron | 15.0% |
| !! | AATTAACATAAAATACATTG+TGG | - | chr8.4:12089231-12089250 | None:intergenic | 15.0% |
| !! | ATTAACATAAAATACATTGT+GGG | - | chr8.4:12089230-12089249 | None:intergenic | 15.0% |
| !! | GAAATAATCAAATAATAAGT+AGG | + | chr8.4:12091909-12091928 | MS.gene58503:intron | 15.0% |
| !! | TATACATAAATTGAAAGTAA+AGG | - | chr8.4:12090889-12090908 | None:intergenic | 15.0% |
| !!! | AAGTTAAGCTTTTATAATAA+AGG | + | chr8.4:12092251-12092270 | MS.gene58503:intron | 15.0% |
| !!! | AGTAATTTGAATATTTTGAT+GGG | + | chr8.4:12090823-12090842 | MS.gene58503:intron | 15.0% |
| !!! | ATTATTATTTTTGTTAGGAT+CGG | + | chr8.4:12088940-12088959 | MS.gene58503:intron | 15.0% |
| !!! | GTTTTTTCTTTTTTTTCTTT+GGG | + | chr8.4:12088702-12088721 | MS.gene58503:intron | 15.0% |
| !!! | TAGTAATTTGAATATTTTGA+TGG | + | chr8.4:12090822-12090841 | MS.gene58503:intron | 15.0% |
| !!! | TATGATATTTTGTTTATTCA+TGG | + | chr8.4:12088735-12088754 | MS.gene58503:intron | 15.0% |
| !!! | TGATATTGTTTAATTTTATG+CGG | + | chr8.4:12089773-12089792 | MS.gene58503:intron | 15.0% |
| !!! | TGTTTTTTCTTTTTTTTCTT+TGG | + | chr8.4:12088701-12088720 | MS.gene58503:intron | 15.0% |
| !!! | TTGTTATTTTATTTTTGTGT+AGG | + | chr8.4:12088763-12088782 | MS.gene58503:intron | 15.0% |
| !!! | TTTTTTCTTTTTTTTCTTTG+GGG | + | chr8.4:12088703-12088722 | MS.gene58503:intron | 15.0% |
| !! | AACATACATAAAATACATTG+GGG | - | chr8.4:12089271-12089290 | None:intergenic | 20.0% |
| !! | ATAGTGAAAAGTAAATATGA+AGG | + | chr8.4:12091525-12091544 | MS.gene58503:intron | 20.0% |
| !! | GAACATACATAAAATACATT+GGG | - | chr8.4:12089272-12089291 | None:intergenic | 20.0% |
| !! | TAAAATTGTAAACTGCATAA+TGG | + | chr8.4:12091213-12091232 | MS.gene58503:intron | 20.0% |
| !! | TAGTGAAAAGTAAATATGAA+GGG | + | chr8.4:12091526-12091545 | MS.gene58503:intron | 20.0% |
| !! | TATCGATCATGTATTAATTA+TGG | - | chr8.4:12090484-12090503 | None:intergenic | 20.0% |
| !! | TGAACATACATAAAATACAT+TGG | - | chr8.4:12089273-12089292 | None:intergenic | 20.0% |
| !! | TTTATCATTAAGTATATCCT+TGG | + | chr8.4:12091174-12091193 | MS.gene58503:intron | 20.0% |
| !!! | AATATGATGTTTTTTCGTTT+TGG | + | chr8.4:12088278-12088297 | MS.gene58503:intron | 20.0% |
| !!! | AATCAATCTCTTAAAGTTTT+GGG | + | chr8.4:12089141-12089160 | MS.gene58503:intron | 20.0% |
| !!! | ATAAATTTTCTCTGTGTTTA+AGG | - | chr8.4:12091159-12091178 | None:intergenic | 20.0% |
| !!! | ATTAAAACCACTCAAATTTT+AGG | + | chr8.4:12090780-12090799 | MS.gene58503:intron | 20.0% |
| !!! | GATATTGTTTAATTTTATGC+GGG | + | chr8.4:12089774-12089793 | MS.gene58503:intron | 20.0% |
| !!! | GATTTTTAAAATTTGTTTCC+TGG | + | chr8.4:12088964-12088983 | MS.gene58503:intron | 20.0% |
| !!! | TGTTAGATATATTTTGTTGT+TGG | - | chr8.4:12089735-12089754 | None:intergenic | 20.0% |
| !!! | TTATTCGTTTAACTTCTTTT+CGG | - | chr8.4:12089635-12089654 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTCAATTTTCCAA+TGG | - | chr8.4:12090080-12090099 | None:intergenic | 20.0% |
| ! | AAAAACATCATATTAACACG+TGG | - | chr8.4:12088272-12088291 | None:intergenic | 25.0% |
| ! | AAAACATCATATTAACACGT+GGG | - | chr8.4:12088271-12088290 | None:intergenic | 25.0% |
| ! | AAAATCAACTAATGAACCAT+TGG | + | chr8.4:12090061-12090080 | MS.gene58503:intron | 25.0% |
| ! | AAAGGAAACTTCATTCTAAA+TGG | + | chr8.4:12091551-12091570 | MS.gene58503:intron | 25.0% |
| ! | ACAGGAGAAAATTAAATTCT+AGG | + | chr8.4:12088876-12088895 | MS.gene58503:CDS | 25.0% |
| ! | ACCAACTCTTCAATTAATAT+AGG | - | chr8.4:12092074-12092093 | None:intergenic | 25.0% |
| ! | AGTGAAAAGTAAATATGAAG+GGG | + | chr8.4:12091527-12091546 | MS.gene58503:intron | 25.0% |
| ! | ATTGCAATTCAGGATAAATA+AGG | - | chr8.4:12093001-12093020 | None:intergenic | 25.0% |
| ! | CAACTGCATTTAATTAATGT+AGG | - | chr8.4:12090949-12090968 | None:intergenic | 25.0% |
| ! | CATCAAAAAAATTGCAATTC+AGG | - | chr8.4:12093011-12093030 | None:intergenic | 25.0% |
| ! | CATCATGTTTATCTCATAAA+TGG | - | chr8.4:12091637-12091656 | None:intergenic | 25.0% |
| ! | GATATTTGCATCATATCAAA+GGG | + | chr8.4:12090416-12090435 | MS.gene58503:intron | 25.0% |
| ! | TACAGATAATTTATGTGTTC+CGG | + | chr8.4:12092880-12092899 | MS.gene58503:intron | 25.0% |
| ! | TATATGACCGATATATAGAA+CGG | + | chr8.4:12089104-12089123 | MS.gene58503:intron | 25.0% |
| ! | TATATTAATTGAAGAGTTGG+TGG | + | chr8.4:12092073-12092092 | MS.gene58503:intron | 25.0% |
| ! | TATGAGAAAAATGTTGGATA+GGG | + | chr8.4:12088530-12088549 | MS.gene58503:intron | 25.0% |
| ! | TCAAAAGGATAGAATACAAT+AGG | + | chr8.4:12090175-12090194 | MS.gene58503:intron | 25.0% |
| ! | TCCAATAACTAAACTCAATA+GGG | - | chr8.4:12092345-12092364 | None:intergenic | 25.0% |
| ! | TCTAACTATGAGAAAAATGT+TGG | + | chr8.4:12088524-12088543 | MS.gene58503:intron | 25.0% |
| ! | TGATATTTGCATCATATCAA+AGG | + | chr8.4:12090415-12090434 | MS.gene58503:intron | 25.0% |
| ! | TTATCTTACAAGATTCTTTC+TGG | + | chr8.4:12092953-12092972 | MS.gene58503:intron | 25.0% |
| ! | TTCCAATAACTAAACTCAAT+AGG | - | chr8.4:12092346-12092365 | None:intergenic | 25.0% |
| ! | TTGCAATTCAGGATAAATAA+GGG | - | chr8.4:12093000-12093019 | None:intergenic | 25.0% |
| ! | TTTGTTCTACTGTCTATATA+TGG | + | chr8.4:12090354-12090373 | MS.gene58503:intron | 25.0% |
| !! | AAAATGAAATCGTTGATTGA+CGG | + | chr8.4:12091875-12091894 | MS.gene58503:intron | 25.0% |
| !! | ATATTAATTGAAGAGTTGGT+GGG | + | chr8.4:12092074-12092093 | MS.gene58503:intron | 25.0% |
| !! | CAATCAATCTCTTAAAGTTT+TGG | + | chr8.4:12089140-12089159 | MS.gene58503:intron | 25.0% |
| !! | CAATTAGCTCATTTGTTAAA+AGG | - | chr8.4:12091240-12091259 | None:intergenic | 25.0% |
| !! | GACAATTTCTTGATATGTTT+TGG | + | chr8.4:12092009-12092028 | MS.gene58503:intron | 25.0% |
| !! | GATTCATAAATTTGAGGTAT+TGG | - | chr8.4:12091767-12091786 | None:intergenic | 25.0% |
| !! | GTAGCAGAATCATAAATTTT+CGG | - | chr8.4:12089350-12089369 | None:intergenic | 25.0% |
| !! | TCACTTAAAAGTGTATTATG+TGG | - | chr8.4:12089978-12089997 | None:intergenic | 25.0% |
| !! | TCAGCTTTTAACAACTAAAA+GGG | - | chr8.4:12091129-12091148 | None:intergenic | 25.0% |
| !! | TTATCTCATAAATGGATTTG+TGG | - | chr8.4:12091629-12091648 | None:intergenic | 25.0% |
| !! | TTATTCTGCATTTCATTTTG+TGG | - | chr8.4:12092631-12092650 | None:intergenic | 25.0% |
| !! | TTCAGCTTTTAACAACTAAA+AGG | - | chr8.4:12091130-12091149 | None:intergenic | 25.0% |
| !!! | ACAGAAGTGTCAAATATAAA+AGG | - | chr8.4:12092730-12092749 | None:intergenic | 25.0% |
| !!! | GATATATTTTGTTGTTGGTA+TGG | - | chr8.4:12089730-12089749 | None:intergenic | 25.0% |
| !!! | GTATTCTATCCTTTTGATTT+TGG | - | chr8.4:12090172-12090191 | None:intergenic | 25.0% |
| !!! | TTGATATGTTTTGGAATTAG+AGG | + | chr8.4:12092018-12092037 | MS.gene58503:intron | 25.0% |
| !!! | TTTTCGTTTTGGTTTTGTAT+TGG | + | chr8.4:12088289-12088308 | MS.gene58503:intron | 25.0% |
| AAGGACTTGAGTTTCATATA+TGG | + | chr8.4:12090227-12090246 | MS.gene58503:intron | 30.0% | |
| AAGTAAGTCATGTGTTATGT+TGG | + | chr8.4:12088240-12088259 | MS.gene58503:intron | 30.0% | |
| AAGTATCTGCCAAAATCAAA+AGG | + | chr8.4:12090160-12090179 | MS.gene58503:intron | 30.0% | |
| AATCCACATTTAATGATGAG+TGG | + | chr8.4:12092147-12092166 | MS.gene58503:intron | 30.0% | |
| AATGATGTTCGATCAAAAGA+TGG | + | chr8.4:12088671-12088690 | MS.gene58503:CDS | 30.0% | |
| ACATATTGTTAAAAAGGCCA+AGG | - | chr8.4:12091194-12091213 | None:intergenic | 30.0% | |
| ACCCTATTGAGTTTAGTTAT+TGG | + | chr8.4:12092341-12092360 | MS.gene58503:intron | 30.0% | |
| ACTCTTCAATTAATATAGGC+AGG | - | chr8.4:12092070-12092089 | None:intergenic | 30.0% | |
| AGAATACAATAGGCTATGAA+AGG | + | chr8.4:12090185-12090204 | MS.gene58503:intron | 30.0% | |
| ATACATTCAGTAAGCACAAA+AGG | - | chr8.4:12089524-12089543 | None:intergenic | 30.0% | |
| ATCCACATTTAATGATGAGT+GGG | + | chr8.4:12092148-12092167 | MS.gene58503:intron | 30.0% | |
| CCAACTATCAACAAATGTAA+AGG | - | chr8.4:12089831-12089850 | None:intergenic | 30.0% | |
| CCATCTGATTCATAAATTTG+AGG | - | chr8.4:12091773-12091792 | None:intergenic | 30.0% | |
| CCTCAAATTTATGAATCAGA+TGG | + | chr8.4:12091770-12091789 | MS.gene58503:intron | 30.0% | |
| CTATGAGAAAAATGTTGGAT+AGG | + | chr8.4:12088529-12088548 | MS.gene58503:intron | 30.0% | |
| GAAATGAGTAAGTAAAGAAG+AGG | + | chr8.4:12091741-12091760 | MS.gene58503:intron | 30.0% | |
| GAAATTGCCTAAAATTTGAG+TGG | - | chr8.4:12090790-12090809 | None:intergenic | 30.0% | |
| GATATTTGTCTGCCAAAAAT+TGG | + | chr8.4:12089424-12089443 | MS.gene58503:CDS | 30.0% | |
| GCCTATATTAATTGAAGAGT+TGG | + | chr8.4:12092070-12092089 | MS.gene58503:intron | 30.0% | |
| GTCATATAGCTTATTCATAG+TGG | - | chr8.4:12089092-12089111 | None:intergenic | 30.0% | |
| GTGAAAAGTAAATATGAAGG+GGG | + | chr8.4:12091528-12091547 | MS.gene58503:intron | 30.0% | |
| GTGAGATAAAAAGACGAATT+CGG | - | chr8.4:12092448-12092467 | None:intergenic | 30.0% | |
| TAAAGGAGTTAGATCAAAGA+AGG | - | chr8.4:12089814-12089833 | None:intergenic | 30.0% | |
| TAATCATTGCAAGTCTTAGA+GGG | - | chr8.4:12092425-12092444 | None:intergenic | 30.0% | |
| TACATTCAGTAAGCACAAAA+GGG | - | chr8.4:12089523-12089542 | None:intergenic | 30.0% | |
| TATGAACTCATACCCTAAAA+TGG | + | chr8.4:12089548-12089567 | MS.gene58503:intron | 30.0% | |
| TATTCTTCACCAGTTTCTTA+TGG | + | chr8.4:12090551-12090570 | MS.gene58503:intron | 30.0% | |
| TATTTGTGTACCTTGTCATA+AGG | - | chr8.4:12091451-12091470 | None:intergenic | 30.0% | |
| TGAAATGCAGAATAAGCAAA+AGG | + | chr8.4:12092636-12092655 | MS.gene58503:CDS | 30.0% | |
| TGATATACCCATCAGAAAAA+TGG | - | chr8.4:12089480-12089499 | None:intergenic | 30.0% | |
| TTGAGCATGGTTAATGAATT+AGG | - | chr8.4:12092281-12092300 | None:intergenic | 30.0% | |
| TTGGAATTAGAGGAAAGATT+GGG | + | chr8.4:12092028-12092047 | MS.gene58503:intron | 30.0% | |
| TTGTAAGATAACAAACTCAC+AGG | - | chr8.4:12092944-12092963 | None:intergenic | 30.0% | |
| TTTCTCTGTGTTTAAGGATA+TGG | - | chr8.4:12091153-12091172 | None:intergenic | 30.0% | |
| ! | AAATCTTCACCTTGTCATTT+AGG | + | chr8.4:12092755-12092774 | MS.gene58503:intron | 30.0% |
| ! | AAATGACCCAATCCAATTTT+TGG | - | chr8.4:12089439-12089458 | None:intergenic | 30.0% |
| ! | ATCTTTTATAGACTGACCTT+AGG | - | chr8.4:12092849-12092868 | None:intergenic | 30.0% |
| ! | CTTTTGTGTTTTCTGAATCA+AGG | + | chr8.4:12090208-12090227 | MS.gene58503:intron | 30.0% |
| ! | GATTTTCTTCTTCTACATGA+TGG | - | chr8.4:12091386-12091405 | None:intergenic | 30.0% |
| ! | GCTAATGCTTTAATTTCCAT+GGG | + | chr8.4:12092673-12092692 | MS.gene58503:CDS | 30.0% |
| ! | GTCAATCAACGATTTCATTT+TGG | - | chr8.4:12091876-12091895 | None:intergenic | 30.0% |
| ! | TGCAATTTGCAACCATTTTA+GGG | - | chr8.4:12089563-12089582 | None:intergenic | 30.0% |
| ! | TTGCAATTTGCAACCATTTT+AGG | - | chr8.4:12089564-12089583 | None:intergenic | 30.0% |
| ! | TTTGGAATTAGAGGAAAGAT+TGG | + | chr8.4:12092027-12092046 | MS.gene58503:intron | 30.0% |
| ! | TTTGTGTAGGTTTTACACTA+CGG | + | chr8.4:12088776-12088795 | MS.gene58503:intron | 30.0% |
| !! | AAAGCTTACCATTTTTCTGA+TGG | + | chr8.4:12089469-12089488 | MS.gene58503:CDS | 30.0% |
| !! | AAGCTTACCATTTTTCTGAT+GGG | + | chr8.4:12089470-12089489 | MS.gene58503:CDS | 30.0% |
| !! | ATTGTTTAATTTTATGCGGG+AGG | + | chr8.4:12089777-12089796 | MS.gene58503:intron | 30.0% |
| !! | CCTTTACATTTGTTGATAGT+TGG | + | chr8.4:12089828-12089847 | MS.gene58503:intron | 30.0% |
| !! | TTCAAGTTTTGCCTTCTTAT+AGG | - | chr8.4:12090642-12090661 | None:intergenic | 30.0% |
| !! | TTTGCTATTGTATTGTTTCC+AGG | + | chr8.4:12092578-12092597 | MS.gene58503:intron | 30.0% |
| !!! | AGGACATCAGTTTTAACTTA+AGG | - | chr8.4:12090929-12090948 | None:intergenic | 30.0% |
| AAATCAACAATGACAGCCTA+AGG | + | chr8.4:12091939-12091958 | MS.gene58503:intron | 35.0% | |
| AAATGTTGCACGCAATAATG+AGG | + | chr8.4:12091687-12091706 | MS.gene58503:intron | 35.0% | |
| AACCCTCTACATGATTAGAT+GGG | + | chr8.4:12090521-12090540 | MS.gene58503:intron | 35.0% | |
| AAGCCAAACTGCATCATTAT+TGG | - | chr8.4:12089884-12089903 | None:intergenic | 35.0% | |
| AAGTAAATATGAAGGGGGAA+AGG | + | chr8.4:12091533-12091552 | MS.gene58503:intron | 35.0% | |
| AAGTCTTAGAGGGACTAATT+TGG | - | chr8.4:12092415-12092434 | None:intergenic | 35.0% | |
| ACACCTTTATATTCAACCCA+AGG | - | chr8.4:12092604-12092623 | None:intergenic | 35.0% | |
| ACATCCTCTTGTGTAAAAAC+AGG | + | chr8.4:12091023-12091042 | MS.gene58503:intron | 35.0% | |
| AGAACAACTATAGTGCTTTG+TGG | - | chr8.4:12089001-12089020 | None:intergenic | 35.0% | |
| AGAAGACTCTCAATGATGTT+AGG | - | chr8.4:12090619-12090638 | None:intergenic | 35.0% | |
| ATCATAGTAATCCAGCTTTG+TGG | - | chr8.4:12088389-12088408 | None:intergenic | 35.0% | |
| ATTCATCTCGTTATTTGTGC+AGG | + | chr8.4:12089377-12089396 | MS.gene58503:intron | 35.0% | |
| CATCCTCTTGTGTAAAAACA+GGG | + | chr8.4:12091024-12091043 | MS.gene58503:intron | 35.0% | |
| CCATGTAGAAGAAAAATCAG+AGG | + | chr8.4:12090036-12090055 | MS.gene58503:intron | 35.0% | |
| GAACCAATAATGATGCAGTT+TGG | + | chr8.4:12089878-12089897 | MS.gene58503:intron | 35.0% | |
| GCAACAACAGATTAATGATC+AGG | - | chr8.4:12089198-12089217 | None:intergenic | 35.0% | |
| GTAATCATTGCAAGTCTTAG+AGG | - | chr8.4:12092426-12092445 | None:intergenic | 35.0% | |
| GTTAGATCAAAGAAGGTAGA+AGG | - | chr8.4:12089807-12089826 | None:intergenic | 35.0% | |
| TACCCACTCATCATTAAATG+TGG | - | chr8.4:12092153-12092172 | None:intergenic | 35.0% | |
| TCTTCCTGATTATGTTCCTA+AGG | + | chr8.4:12092830-12092849 | MS.gene58503:CDS | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr8.4:12091029-12091048 | MS.gene58503:intron | 35.0% | |
| TGAGTCACCGTTCTATATAT+CGG | - | chr8.4:12089114-12089133 | None:intergenic | 35.0% | |
| TGCAATAGCTTAACACTTCT+CGG | - | chr8.4:12092121-12092140 | None:intergenic | 35.0% | |
| TGGATTACTATGATGACATG+TGG | + | chr8.4:12088395-12088414 | MS.gene58503:CDS | 35.0% | |
| TGTCTGCCAAAAATTGGATT+GGG | + | chr8.4:12089430-12089449 | MS.gene58503:CDS | 35.0% | |
| TGTTGTAACCAAACCAATAC+AGG | + | chr8.4:12093054-12093073 | MS.gene58503:CDS | 35.0% | |
| TTAAGCCTACCATAAGAAAC+TGG | - | chr8.4:12090563-12090582 | None:intergenic | 35.0% | |
| TTAATGATGAGTGGGTAGTT+GGG | + | chr8.4:12092156-12092175 | MS.gene58503:intron | 35.0% | |
| TTGTCTGCCAAAAATTGGAT+TGG | + | chr8.4:12089429-12089448 | MS.gene58503:CDS | 35.0% | |
| TTGTTCATCTTTCTTGCAAG+TGG | - | chr8.4:12089857-12089876 | None:intergenic | 35.0% | |
| TTTAATGATGAGTGGGTAGT+TGG | + | chr8.4:12092155-12092174 | MS.gene58503:intron | 35.0% | |
| ! | AAAAGCTTAACTTGATGTGC+TGG | - | chr8.4:12092244-12092263 | None:intergenic | 35.0% |
| ! | AATGCTTTAATTTCCATGGG+AGG | + | chr8.4:12092676-12092695 | MS.gene58503:CDS | 35.0% |
| ! | AATTTTGAACAGAAGTCTCG+TGG | - | chr8.4:12092528-12092547 | None:intergenic | 35.0% |
| ! | ACTATTTTCTATCCACAAGG+TGG | + | chr8.4:12088587-12088606 | MS.gene58503:CDS | 35.0% |
| ! | ATGCTCCAGTACATTTTCTA+GGG | + | chr8.4:12090699-12090718 | MS.gene58503:intron | 35.0% |
| ! | ATTTTGAACAGAAGTCTCGT+GGG | - | chr8.4:12092527-12092546 | None:intergenic | 35.0% |
| ! | CCTCTGATTTTTCTTCTACA+TGG | - | chr8.4:12090039-12090058 | None:intergenic | 35.0% |
| ! | GAAAAATGGTAAGCTTTTCC+AGG | - | chr8.4:12089466-12089485 | None:intergenic | 35.0% |
| ! | GGCTAATGCTTTAATTTCCA+TGG | + | chr8.4:12092672-12092691 | MS.gene58503:CDS | 35.0% |
| ! | TATGATTGCAAGTGCGTTTT+TGG | + | chr8.4:12090271-12090290 | MS.gene58503:intron | 35.0% |
| ! | TATGCATGTGCTGAATGTTT+TGG | - | chr8.4:12090445-12090464 | None:intergenic | 35.0% |
| ! | TATGCTCCAGTACATTTTCT+AGG | + | chr8.4:12090698-12090717 | MS.gene58503:intron | 35.0% |
| ! | TCATAGTAATCCAGCTTTGT+GGG | - | chr8.4:12088388-12088407 | None:intergenic | 35.0% |
| !! | CGTTTAACTTCTTTTCGGTA+GGG | - | chr8.4:12089630-12089649 | None:intergenic | 35.0% |
| !! | GCTTATTCATAGTGGATGTT+AGG | - | chr8.4:12089084-12089103 | None:intergenic | 35.0% |
| !! | TCGTTTAACTTCTTTTCGGT+AGG | - | chr8.4:12089631-12089650 | None:intergenic | 35.0% |
| !! | TTAACTTACTTTTCCTCCCA+TGG | - | chr8.4:12092692-12092711 | None:intergenic | 35.0% |
| !! | TTACACTACGGTGTTTTTGA+GGG | + | chr8.4:12088788-12088807 | MS.gene58503:CDS | 35.0% |
| !! | TTATTTCGCCTGTATTGGTT+TGG | - | chr8.4:12093065-12093084 | None:intergenic | 35.0% |
| !! | TTTACACTACGGTGTTTTTG+AGG | + | chr8.4:12088787-12088806 | MS.gene58503:CDS | 35.0% |
| !!! | ATCTCTTAAAGTTTTGGGTG+AGG | + | chr8.4:12089146-12089165 | MS.gene58503:intron | 35.0% |
| !!! | GGCATGTTTTGATATTGGAT+CGG | + | chr8.4:12088564-12088583 | MS.gene58503:CDS | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr8.4:12091030-12091049 | None:intergenic | 35.0% |
| AAAGATTGGGAGAAGATGCA+TGG | + | chr8.4:12092041-12092060 | MS.gene58503:intron | 40.0% | |
| AATGTTGGATAGGGAGTTGA+TGG | + | chr8.4:12088539-12088558 | MS.gene58503:intron | 40.0% | |
| ACCCTCTACATGATTAGATG+GGG | + | chr8.4:12090522-12090541 | MS.gene58503:intron | 40.0% | |
| ATCAGGACCATCAAAAAACC+AGG | - | chr8.4:12089181-12089200 | None:intergenic | 40.0% | |
| ATTAAGAATCCAGTGTCTGC+CGG | - | chr8.4:12088620-12088639 | None:intergenic | 40.0% | |
| ATTGTATTGTTTCCAGGCCT+TGG | + | chr8.4:12092584-12092603 | MS.gene58503:intron | 40.0% | |
| CAACCCTCTACATGATTAGA+TGG | + | chr8.4:12090520-12090539 | MS.gene58503:intron | 40.0% | |
| CACACTCATCCGACATAAAT+TGG | + | chr8.4:12090102-12090121 | MS.gene58503:intron | 40.0% | |
| CAGCAGAAACCTAAATGACA+AGG | - | chr8.4:12092767-12092786 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr8.4:12091055-12091074 | MS.gene58503:intron | 40.0% | |
| CTAATCATGTAGAGGGTTGA+TGG | - | chr8.4:12090519-12090538 | None:intergenic | 40.0% | |
| CTACTACTCAATTCCAGAAG+CGG | - | chr8.4:12088340-12088359 | None:intergenic | 40.0% | |
| CTGACCTTAGGAACATAATC+AGG | - | chr8.4:12092837-12092856 | None:intergenic | 40.0% | |
| CTTCACCAGTTTCTTATGGT+AGG | + | chr8.4:12090555-12090574 | MS.gene58503:intron | 40.0% | |
| GAGAGTCTTCTCCTATAAGA+AGG | + | chr8.4:12090628-12090647 | MS.gene58503:intron | 40.0% | |
| GCAGAATAAGCAAAAGGAGT+TGG | + | chr8.4:12092642-12092661 | MS.gene58503:CDS | 40.0% | |
| GTCATGTGACTGTAATGTCA+CGG | + | chr8.4:12090985-12091004 | MS.gene58503:intron | 40.0% | |
| TAACAACTAAAAGGGCAACC+TGG | - | chr8.4:12091121-12091140 | None:intergenic | 40.0% | |
| TATTGTGCAGGATCTGAGAA+AGG | - | chr8.4:12091820-12091839 | None:intergenic | 40.0% | |
| TCAAAACCAGCAACTAGTTC+CGG | - | chr8.4:12092902-12092921 | None:intergenic | 40.0% | |
| TCATGTGACTGTAATGTCAC+GGG | + | chr8.4:12090986-12091005 | MS.gene58503:intron | 40.0% | |
| TGAATGCCTACCTTATGACA+AGG | + | chr8.4:12091438-12091457 | MS.gene58503:intron | 40.0% | |
| TGTGTACCTTGTCATAAGGT+AGG | - | chr8.4:12091447-12091466 | None:intergenic | 40.0% | |
| TTACACAAGAGGATGTTTCC+AGG | - | chr8.4:12091019-12091038 | None:intergenic | 40.0% | |
| TTCCTCCCTAGAAAATGTAC+TGG | - | chr8.4:12090707-12090726 | None:intergenic | 40.0% | |
| TTGTATTGTTTCCAGGCCTT+GGG | + | chr8.4:12092585-12092604 | MS.gene58503:intron | 40.0% | |
| TTTATATTCAACCCAAGGCC+TGG | - | chr8.4:12092599-12092618 | None:intergenic | 40.0% | |
| ! | AAACAACACGAGACTAGTCA+AGG | - | chr8.4:12092500-12092519 | None:intergenic | 40.0% |
| ! | ATGAAATCGTTGATTGACGG+AGG | + | chr8.4:12091878-12091897 | MS.gene58503:intron | 40.0% |
| ! | ATGTTGGATAGGGAGTTGAT+GGG | + | chr8.4:12088540-12088559 | MS.gene58503:intron | 40.0% |
| ! | ATTTTCTATCCACAAGGTGG+TGG | + | chr8.4:12088590-12088609 | MS.gene58503:CDS | 40.0% |
| ! | CACTATCTGTTGATGAGAAC+AGG | + | chr8.4:12088858-12088877 | MS.gene58503:CDS | 40.0% |
| ! | CGGACTATTTTCTATCCACA+AGG | + | chr8.4:12088584-12088603 | MS.gene58503:CDS | 40.0% |
| ! | TTTGAAGTGAGAGACAAGTG+TGG | - | chr8.4:12088437-12088456 | None:intergenic | 40.0% |
| ! | TTTTGACATAACTGTGCTGC+TGG | + | chr8.4:12092916-12092935 | MS.gene58503:intron | 40.0% |
| !! | AGGCCTTGGGTTGAATATAA+AGG | + | chr8.4:12092598-12092617 | MS.gene58503:intron | 40.0% |
| !! | ATGCAACATTGACTTGAGCA+TGG | - | chr8.4:12092294-12092313 | None:intergenic | 40.0% |
| !! | ATTGGTTTGGTTACAACAGC+TGG | - | chr8.4:12093052-12093071 | None:intergenic | 40.0% |
| !! | CATTTAAGGCTAGCTTAGGA+GGG | + | chr8.4:12092190-12092209 | MS.gene58503:intron | 40.0% |
| !! | GCTTCTGGAATTGAGTAGTA+GGG | + | chr8.4:12088339-12088358 | MS.gene58503:CDS | 40.0% |
| !! | TACGGTGTTTTTGAGGGTAT+GGG | + | chr8.4:12088794-12088813 | MS.gene58503:CDS | 40.0% |
| !! | TTAATTGAAGAGTTGGTGGG+TGG | + | chr8.4:12092077-12092096 | MS.gene58503:intron | 40.0% |
| !!! | AGAGTGGAGGTTTTGAATAG+CGG | + | chr8.4:12091987-12092006 | MS.gene58503:intron | 40.0% |
| !!! | GTGATGTCCTGGTTTTTTGA+TGG | + | chr8.4:12089171-12089190 | MS.gene58503:intron | 40.0% |
| !!! | TGGGAGGCATGTTTTGATAT+TGG | + | chr8.4:12088559-12088578 | MS.gene58503:CDS | 40.0% |
| ACATTGGGGAGTCTGAAAAG+CGG | - | chr8.4:12089257-12089276 | None:intergenic | 45.0% | |
| CCCCCATCTAATCATGTAGA+GGG | - | chr8.4:12090526-12090545 | None:intergenic | 45.0% | |
| CCCTCTACATGATTAGATGG+GGG | + | chr8.4:12090523-12090542 | MS.gene58503:intron | 45.0% | |
| CCTCTACATGATTAGATGGG+GGG | + | chr8.4:12090524-12090543 | MS.gene58503:intron | 45.0% | |
| GATGAAGCTGCTAAGCTTTG+CGG | + | chr8.4:12092801-12092820 | MS.gene58503:CDS | 45.0% | |
| GCAAAAGGAGTTGGAGTTAG+AGG | + | chr8.4:12092651-12092670 | MS.gene58503:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr8.4:12091054-12091073 | MS.gene58503:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr8.4:12091051-12091070 | MS.gene58503:intron | 45.0% | |
| GGGAGGTTAAGTCGCATTTA+AGG | + | chr8.4:12092176-12092195 | MS.gene58503:intron | 45.0% | |
| TTGATTGACGGAGGAGAAAG+AGG | + | chr8.4:12091887-12091906 | MS.gene58503:intron | 45.0% | |
| TTTGTGGCAGAAGAACTTCC+AGG | - | chr8.4:12088985-12089004 | None:intergenic | 45.0% | |
| ! | CACGAGACTAGTCAAGGTTA+TGG | - | chr8.4:12092494-12092513 | None:intergenic | 45.0% |
| ! | TCTGGAATTGAGTAGTAGGG+TGG | + | chr8.4:12088342-12088361 | MS.gene58503:CDS | 45.0% |
| ! | TCTTTGTGCTGCTATTGTGC+AGG | - | chr8.4:12091832-12091851 | None:intergenic | 45.0% |
| ! | TTGAGGGCACACTAGAGAAA+GGG | + | chr8.4:12088825-12088844 | MS.gene58503:CDS | 45.0% |
| ! | TTTGAGGGCACACTAGAGAA+AGG | + | chr8.4:12088824-12088843 | MS.gene58503:CDS | 45.0% |
| !! | CGCTTCTGGAATTGAGTAGT+AGG | + | chr8.4:12088338-12088357 | MS.gene58503:CDS | 45.0% |
| !! | CTACGGTGTTTTTGAGGGTA+TGG | + | chr8.4:12088793-12088812 | MS.gene58503:CDS | 45.0% |
| !! | CTCCAGTACATTTTCTAGGG+AGG | + | chr8.4:12090702-12090721 | MS.gene58503:intron | 45.0% |
| !! | GCATTTAAGGCTAGCTTAGG+AGG | + | chr8.4:12092189-12092208 | MS.gene58503:intron | 45.0% |
| !! | GTCGCATTTAAGGCTAGCTT+AGG | + | chr8.4:12092186-12092205 | MS.gene58503:intron | 45.0% |
| !! | GTGTTTTTGAGGGTATGGGA+GGG | + | chr8.4:12088798-12088817 | MS.gene58503:CDS | 45.0% |
| !! | TCATGTAGAGGGTTGATGGT+TGG | - | chr8.4:12090515-12090534 | None:intergenic | 45.0% |
| !! | TGTTTTTGAGGGTATGGGAG+GGG | + | chr8.4:12088799-12088818 | MS.gene58503:CDS | 45.0% |
| !!! | AGTTTTGAGGAGCTCAAGAG+TGG | + | chr8.4:12091971-12091990 | MS.gene58503:intron | 45.0% |
| !!! | TTATTATTATTATTTTTGTT+AGG | + | chr8.4:12088935-12088954 | MS.gene58503:intron | 5.0% |
| AATGTCACGGGTTCAAGTCC+TGG | + | chr8.4:12090998-12091017 | MS.gene58503:intron | 50.0% | |
| ATGATGAGTGGGTAGTTGGG+AGG | + | chr8.4:12092159-12092178 | MS.gene58503:intron | 50.0% | |
| CACACTAGAGAAAGGGAAGG+AGG | + | chr8.4:12088832-12088851 | MS.gene58503:CDS | 50.0% | |
| CCCCCCATCTAATCATGTAG+AGG | - | chr8.4:12090527-12090546 | None:intergenic | 50.0% | |
| GGAATTGAGTAGTAGGGTGG+TGG | + | chr8.4:12088345-12088364 | MS.gene58503:CDS | 50.0% | |
| GGTGGCTATGAGAAGTGGAA+AGG | + | chr8.4:12092095-12092114 | MS.gene58503:intron | 50.0% | |
| TGAGCTCCTCAAAACTCCCT+CGG | - | chr8.4:12091967-12091986 | None:intergenic | 50.0% | |
| TGCGTGCAACATTTCTGTCG+TGG | - | chr8.4:12091681-12091700 | None:intergenic | 50.0% | |
| TGTGTTCCGGAACTAGTTGC+TGG | + | chr8.4:12092893-12092912 | MS.gene58503:intron | 50.0% | |
| TTTGAGGAGCTCAAGAGTGG+AGG | + | chr8.4:12091974-12091993 | MS.gene58503:intron | 50.0% | |
| ! | ATTGAGTAGTAGGGTGGTGG+TGG | + | chr8.4:12088348-12088367 | MS.gene58503:CDS | 50.0% |
| ! | GGATTGGGTCATTTAGAGCC+TGG | + | chr8.4:12089445-12089464 | MS.gene58503:CDS | 50.0% |
| !! | GGTGTTTTTGAGGGTATGGG+AGG | + | chr8.4:12088797-12088816 | MS.gene58503:CDS | 50.0% |
| !! | TTGGATAGGGAGTTGATGGG+AGG | + | chr8.4:12088543-12088562 | MS.gene58503:intron | 50.0% |
| AATGACAGCCTAAGGAGCCG+AGG | + | chr8.4:12091947-12091966 | MS.gene58503:intron | 55.0% | |
| ATGACAGCCTAAGGAGCCGA+GGG | + | chr8.4:12091948-12091967 | MS.gene58503:intron | 55.0% | |
| CAAAACTCCCTCGGCTCCTT+AGG | - | chr8.4:12091958-12091977 | None:intergenic | 55.0% | |
| GAAGCTGCTAAGCTTTGCGG+TGG | + | chr8.4:12092804-12092823 | MS.gene58503:CDS | 55.0% | |
| GGACAAGAGTCCCACAAAGC+TGG | + | chr8.4:12088375-12088394 | MS.gene58503:CDS | 55.0% | |
| GGGCACACTAGAGAAAGGGA+AGG | + | chr8.4:12088829-12088848 | MS.gene58503:CDS | 55.0% | |
| GGTATGGGAGGGGAGTTTGA+GGG | + | chr8.4:12088809-12088828 | MS.gene58503:CDS | 55.0% | |
| TGGGTGAGGATGTGATGTCC+TGG | + | chr8.4:12089160-12089179 | MS.gene58503:intron | 55.0% | |
| TGTGCAGGTTGCACTCAGCA+GGG | + | chr8.4:12089392-12089411 | MS.gene58503:intron | 55.0% | |
| TTGTGCAGGTTGCACTCAGC+AGG | + | chr8.4:12089391-12089410 | MS.gene58503:intron | 55.0% | |
| ! | AAGGAGCCGAGGGAGTTTTG+AGG | + | chr8.4:12091958-12091977 | MS.gene58503:intron | 55.0% |
| ! | TGGTGGGTGGCTATGAGAAG+TGG | + | chr8.4:12092090-12092109 | MS.gene58503:intron | 55.0% |
| !! | TAGTAGGGTGGTGGTGGAGA+TGG | + | chr8.4:12088354-12088373 | MS.gene58503:CDS | 55.0% |
| GGGTATGGGAGGGGAGTTTG+AGG | + | chr8.4:12088808-12088827 | MS.gene58503:CDS | 60.0% | |
| GTGCTAACCGTGCGGTAGCA+CGG | - | chr8.4:12089604-12089623 | None:intergenic | 60.0% | |
| GTGCTACCGCACGGTTAGCA+CGG | + | chr8.4:12089603-12089622 | MS.gene58503:intron | 60.0% | |
| TCTTGACCCGTGCTACCGCA+CGG | + | chr8.4:12089594-12089613 | MS.gene58503:intron | 60.0% | |
| TGCTAACCGTGCGGTAGCAC+GGG | - | chr8.4:12089603-12089622 | None:intergenic | 60.0% | |
| TGCTACCGCACGGTTAGCAC+GGG | + | chr8.4:12089604-12089623 | MS.gene58503:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8.4:12091067-12091086 | MS.gene58503:intron | 60.0% |
| ! | TCCACAAGGTGGTGGTCAGC+CGG | + | chr8.4:12088598-12088617 | MS.gene58503:CDS | 60.0% |
| ACACAGAGTCGCGCCGCTTC+TGG | + | chr8.4:12088324-12088343 | MS.gene58503:intron | 65.0% | |
| AGAAGCGGCGCGACTCTGTG+TGG | - | chr8.4:12088325-12088344 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr8.4:12091082-12091101 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8.4:12091069-12091088 | None:intergenic | 65.0% | |
| CTGACGCTCCCGCATACGCA+GGG | - | chr8.4:12091094-12091113 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr8.4:12091082-12091101 | MS.gene58503:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr8.4:12091083-12091102 | None:intergenic | 65.0% | |
| TAGGGCCCGTGCTAACCGTG+CGG | - | chr8.4:12089612-12089631 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr8.4:12091083-12091102 | MS.gene58503:intron | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr8.4:12091084-12091103 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr8.4:12091088-12091107 | None:intergenic | 70.0% | |
| GCCGGCTGACCACCACCTTG+TGG | - | chr8.4:12088602-12088621 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr8.4:12091089-12091108 | None:intergenic | 70.0% | |
| GCTGACGCTCCCGCATACGC+AGG | - | chr8.4:12091095-12091114 | None:intergenic | 70.0% | |
| GGTGGTCAGCCGGCAGACAC+TGG | + | chr8.4:12088608-12088627 | MS.gene58503:CDS | 70.0% | |
| !! | TGCGGGAGCGTCAGCGCACC+AGG | + | chr8.4:12091100-12091119 | MS.gene58503:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 12088219 | 12093084 | 12088219 | ID=MS.gene58503 |
| chr8.4 | mRNA | 12088219 | 12093084 | 12088219 | ID=MS.gene58503.t1;Parent=MS.gene58503 |
| chr8.4 | exon | 12088219 | 12088226 | 12088219 | ID=MS.gene58503.t1.exon1;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12088219 | 12088226 | 12088219 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| chr8.4 | exon | 12088330 | 12088456 | 12088330 | ID=MS.gene58503.t1.exon2;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12088330 | 12088456 | 12088330 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| chr8.4 | exon | 12088551 | 12088697 | 12088551 | ID=MS.gene58503.t1.exon3;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12088551 | 12088697 | 12088551 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| chr8.4 | exon | 12088785 | 12088897 | 12088785 | ID=MS.gene58503.t1.exon4;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12088785 | 12088897 | 12088785 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| chr8.4 | exon | 12089399 | 12089491 | 12089399 | ID=MS.gene58503.t1.exon5;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12089399 | 12089491 | 12089399 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| chr8.4 | exon | 12092600 | 12092702 | 12092600 | ID=MS.gene58503.t1.exon6;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12092600 | 12092702 | 12092600 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| chr8.4 | exon | 12092777 | 12092851 | 12092777 | ID=MS.gene58503.t1.exon7;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12092777 | 12092851 | 12092777 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| chr8.4 | exon | 12093034 | 12093084 | 12093034 | ID=MS.gene58503.t1.exon8;Parent=MS.gene58503.t1 |
| chr8.4 | CDS | 12093034 | 12093084 | 12093034 | ID=cds.MS.gene58503.t1;Parent=MS.gene58503.t1 |
| Gene Sequence |
| Protein sequence |
