Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82600.t1 | XP_014634878.1 | 83.1 | 355 | 23 | 2 | 1 | 354 | 1 | 319 | 2.90E-168 | 601.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82600.t1 | Q9SJW6 | 79.5 | 298 | 55 | 4 | 58 | 352 | 80 | 374 | 3.9e-137 | 489.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82600.t1 | A0A3Q0EPH9 | 81.4 | 354 | 29 | 2 | 1 | 353 | 1 | 318 | 2.4e-164 | 587.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene82600 | 0.898496 | 5.01E-77 | -1.69E-46 |
| MS.gene049208 | MS.gene82600 | 0.809609 | 1.74E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene82600 | 0.874225 | 7.97E-68 | -1.69E-46 |
| MS.gene049368 | MS.gene82600 | 0.844761 | 6.19E-59 | -1.69E-46 |
| MS.gene049711 | MS.gene82600 | 0.805595 | 1.24E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene82600 | 0.835129 | 2.01E-56 | -1.69E-46 |
| MS.gene049887 | MS.gene82600 | 0.838691 | 2.47E-57 | -1.69E-46 |
| MS.gene050253 | MS.gene82600 | 0.803244 | 3.82E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene82600 | 0.818449 | 1.95E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene82600 | 0.813142 | 2.97E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene82600 | 0.839052 | 2.00E-57 | -1.69E-46 |
| MS.gene050689 | MS.gene82600 | 0.842692 | 2.21E-58 | -1.69E-46 |
| MS.gene050807 | MS.gene82600 | 0.807386 | 5.19E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene82600 | 0.834677 | 2.61E-56 | -1.69E-46 |
| MS.gene050844 | MS.gene82600 | 0.801692 | 7.98E-49 | -1.69E-46 |
| MS.gene050901 | MS.gene82600 | 0.808433 | 3.10E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene82600 | 0.819534 | 1.10E-52 | -1.69E-46 |
| MS.gene051029 | MS.gene82600 | 0.826413 | 2.75E-54 | -1.69E-46 |
| MS.gene051102 | MS.gene82600 | 0.824808 | 6.60E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene82600 | 0.822353 | 2.48E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene82600 | 0.844926 | 5.59E-59 | -1.69E-46 |
| MS.gene051328 | MS.gene82600 | 0.815307 | 9.88E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene82600 | 0.833483 | 5.20E-56 | -1.69E-46 |
| MS.gene05134 | MS.gene82600 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene82600 | 0.824933 | 6.17E-54 | -1.69E-46 |
| MS.gene051365 | MS.gene82600 | 0.836464 | 9.22E-57 | -1.69E-46 |
| MS.gene051381 | MS.gene82600 | 0.815031 | 1.14E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene82600 | 0.805246 | 1.46E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene82600 | 0.831743 | 1.40E-55 | -1.69E-46 |
| MS.gene051700 | MS.gene82600 | 0.860706 | 1.71E-63 | -1.69E-46 |
| MS.gene051719 | MS.gene82600 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene82600 | 0.820839 | 5.55E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene82600 | 0.820722 | 5.90E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene82600 | 0.828552 | 8.44E-55 | -1.69E-46 |
| MS.gene051902 | MS.gene82600 | 0.809328 | 2.00E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene82600 | 0.845053 | 5.16E-59 | -1.69E-46 |
| MS.gene052072 | MS.gene82600 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene82600 | 0.807551 | 4.78E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene82600 | 0.839029 | 2.02E-57 | -1.69E-46 |
| MS.gene052335 | MS.gene82600 | 0.827197 | 1.79E-54 | -1.69E-46 |
| MS.gene052397 | MS.gene82600 | 0.804843 | 1.78E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene82600 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene82600 | 0.820018 | 8.56E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene82600 | 0.842216 | 2.96E-58 | -1.69E-46 |
| MS.gene052609 | MS.gene82600 | 0.853964 | 1.69E-61 | -1.69E-46 |
| MS.gene052665 | MS.gene82600 | 0.805307 | 1.42E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene82600 | 0.831837 | 1.33E-55 | -1.69E-46 |
| MS.gene052863 | MS.gene82600 | 0.824904 | 6.27E-54 | -1.69E-46 |
| MS.gene052932 | MS.gene82600 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene82600 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene82600 | 0.807011 | 6.22E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene82600 | 0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene82600 | 0.823981 | 1.03E-53 | -1.69E-46 |
| MS.gene053122 | MS.gene82600 | 0.821427 | 4.06E-53 | -1.69E-46 |
| MS.gene053143 | MS.gene82600 | 0.804282 | 2.33E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene82600 | 0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene82600 | 0.857721 | 1.35E-62 | -1.69E-46 |
| MS.gene053542 | MS.gene82600 | 0.806671 | 7.35E-50 | -1.69E-46 |
| MS.gene053563 | MS.gene82600 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene82600 | 0.825291 | 5.08E-54 | -1.69E-46 |
| MS.gene053599 | MS.gene82600 | 0.820687 | 6.01E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene82600 | 0.836355 | 9.82E-57 | -1.69E-46 |
| MS.gene054139 | MS.gene82600 | 0.808664 | 2.77E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene82600 | 0.827095 | 1.89E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene82600 | 0.80817 | 3.53E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene82600 | 0.824921 | 6.21E-54 | -1.69E-46 |
| MS.gene05462 | MS.gene82600 | 0.815731 | 7.96E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene82600 | 0.808224 | 3.44E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene82600 | 0.805185 | 1.51E-49 | -1.69E-46 |
| MS.gene054943 | MS.gene82600 | 0.816954 | 4.24E-52 | -1.69E-46 |
| MS.gene055144 | MS.gene82600 | 0.812458 | 4.20E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene82600 | 0.821668 | 3.57E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene82600 | 0.837026 | 6.63E-57 | -1.69E-46 |
| MS.gene055313 | MS.gene82600 | 0.857586 | 1.48E-62 | -1.69E-46 |
| MS.gene055314 | MS.gene82600 | 0.831898 | 1.29E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene82600 | 0.841912 | 3.56E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene82600 | 0.834498 | 2.89E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene82600 | 0.851965 | 6.29E-61 | -1.69E-46 |
| MS.gene055469 | MS.gene82600 | 0.842529 | 2.45E-58 | -1.69E-46 |
| MS.gene055512 | MS.gene82600 | 0.839042 | 2.01E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene82600 | 0.875151 | 3.86E-68 | -1.69E-46 |
| MS.gene055537 | MS.gene82600 | 0.821919 | 3.13E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene82600 | -0.831503 | 1.61E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene82600 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene82600 | 0.806107 | 9.66E-50 | -1.69E-46 |
| MS.gene056005 | MS.gene82600 | 0.836608 | 8.47E-57 | -1.69E-46 |
| MS.gene056043 | MS.gene82600 | -0.832251 | 1.05E-55 | -1.69E-46 |
| MS.gene056045 | MS.gene82600 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene82600 | 0.801823 | 7.51E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene82600 | 0.843295 | 1.53E-58 | -1.69E-46 |
| MS.gene056215 | MS.gene82600 | 0.80839 | 3.17E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene82600 | 0.867927 | 9.54E-66 | -1.69E-46 |
| MS.gene056390 | MS.gene82600 | 0.813939 | 1.99E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene82600 | 0.828467 | 8.84E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene82600 | 0.803954 | 2.72E-49 | -1.69E-46 |
| MS.gene056901 | MS.gene82600 | 0.801967 | 7.01E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene82600 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene82600 | 0.830639 | 2.62E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene82600 | 0.832401 | 9.66E-56 | -1.69E-46 |
| MS.gene057132 | MS.gene82600 | 0.82575 | 3.95E-54 | -1.69E-46 |
| MS.gene057360 | MS.gene82600 | 0.8516 | 7.99E-61 | -1.69E-46 |
| MS.gene057693 | MS.gene82600 | 0.821812 | 3.31E-53 | -1.69E-46 |
| MS.gene057694 | MS.gene82600 | 0.815234 | 1.03E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene82600 | 0.827726 | 1.33E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene82600 | 0.815778 | 7.76E-52 | -1.69E-46 |
| MS.gene058339 | MS.gene82600 | 0.808737 | 2.67E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene82600 | 0.802479 | 5.50E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene82600 | 0.823938 | 1.06E-53 | -1.69E-46 |
| MS.gene058638 | MS.gene82600 | 0.808516 | 2.98E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene82600 | 0.824341 | 8.51E-54 | -1.69E-46 |
| MS.gene058646 | MS.gene82600 | 0.802084 | 6.63E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene82600 | 0.825888 | 3.67E-54 | -1.69E-46 |
| MS.gene058852 | MS.gene82600 | 0.851783 | 7.09E-61 | -1.69E-46 |
| MS.gene05897 | MS.gene82600 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene82600 | 0.822787 | 1.96E-53 | -1.69E-46 |
| MS.gene059171 | MS.gene82600 | 0.852914 | 3.38E-61 | -1.69E-46 |
| MS.gene059227 | MS.gene82600 | 0.841657 | 4.16E-58 | -1.69E-46 |
| MS.gene059331 | MS.gene82600 | 0.800574 | 1.35E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene82600 | 0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene82600 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene82600 | 0.814556 | 1.45E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene82600 | 0.851867 | 6.71E-61 | -1.69E-46 |
| MS.gene059778 | MS.gene82600 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene82600 | 0.836088 | 1.15E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene82600 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene059937 | MS.gene82600 | 0.81386 | 2.07E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene82600 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene060365 | MS.gene82600 | 0.83962 | 1.42E-57 | -1.69E-46 |
| MS.gene060429 | MS.gene82600 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene82600 | 0.818929 | 1.52E-52 | -1.69E-46 |
| MS.gene060637 | MS.gene82600 | 0.821348 | 4.24E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene82600 | 0.834079 | 3.69E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene82600 | 0.802087 | 6.63E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene82600 | 0.814536 | 1.47E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene82600 | 0.822101 | 2.84E-53 | -1.69E-46 |
| MS.gene061006 | MS.gene82600 | 0.816696 | 4.84E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene82600 | 0.828157 | 1.05E-54 | -1.69E-46 |
| MS.gene061188 | MS.gene82600 | 0.800391 | 1.47E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82600.t1 | MTR_3g049070 | 99.663 | 297 | 1 | 0 | 58 | 354 | 79 | 375 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82600.t1 | AT2G31300 | 79.530 | 298 | 55 | 4 | 58 | 352 | 80 | 374 | 3.49e-166 | 469 |
| MS.gene82600.t1 | AT2G30910 | 78.859 | 298 | 56 | 5 | 58 | 351 | 80 | 374 | 7.75e-166 | 468 |
| MS.gene82600.t1 | AT2G30910 | 78.859 | 298 | 56 | 5 | 58 | 351 | 80 | 374 | 7.75e-166 | 468 |
| MS.gene82600.t1 | AT2G30910 | 76.174 | 298 | 64 | 5 | 58 | 351 | 80 | 374 | 3.00e-158 | 449 |
| MS.gene82600.t1 | AT2G31300 | 79.787 | 282 | 51 | 4 | 58 | 336 | 80 | 358 | 6.51e-156 | 443 |
Find 76 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCATGTCTTTAATATT+TGG | 0.070354 | 3.1:+36045871 | None:intergenic |
| AACTCATGTCTTTAATATTT+GGG | 0.205079 | 3.1:+36045872 | None:intergenic |
| AGTACATCTGATATGAAATT+TGG | 0.233687 | 3.1:-36041781 | MS.gene82600:CDS |
| TATCAGTTCTCTGAAGCATT+TGG | 0.292881 | 3.1:-36039342 | MS.gene82600:intron |
| CTTCAGTGACAAGTGTTTCA+TGG | 0.301682 | 3.1:-36042900 | MS.gene82600:CDS |
| AATCACGGAACACGACATTC+TGG | 0.316967 | 3.1:+36040948 | None:intergenic |
| AAGAATTGCTGTATGGGATT+TGG | 0.350947 | 3.1:-36038901 | MS.gene82600:CDS |
| GTTTCTGAGAGAACGGTAAT+AGG | 0.350950 | 3.1:-36040793 | MS.gene82600:CDS |
| AAATATTAAAGACATGAGTT+TGG | 0.357732 | 3.1:-36045869 | MS.gene82600:CDS |
| TGATGTGGGTCCTTCTCCTT+TGG | 0.364729 | 3.1:-36040972 | MS.gene82600:CDS |
| CGCAAGAATACCAACATTAT+CGG | 0.368715 | 3.1:+36042873 | None:intergenic |
| GTACCCATTCTGATCCTTCA+AGG | 0.371878 | 3.1:+36044897 | None:intergenic |
| CTCTCATCATCTTGGACATT+CGG | 0.378975 | 3.1:-36041428 | MS.gene82600:CDS |
| ATAGCATATACAAACAGTTT+TGG | 0.380254 | 3.1:+36044214 | None:intergenic |
| CTGCAGATGAAAGAGGAGTT+TGG | 0.391042 | 3.1:-36040738 | MS.gene82600:intron |
| ATCAGTTCTCTGAAGCATTT+GGG | 0.393609 | 3.1:-36039341 | MS.gene82600:intron |
| AGCTTGATCTCTCATCATCT+TGG | 0.394251 | 3.1:-36041436 | MS.gene82600:CDS |
| AATATTAAAGACATGAGTTT+GGG | 0.394727 | 3.1:-36045868 | MS.gene82600:CDS |
| ATCGTTTCCCACACCATACT+TGG | 0.404007 | 3.1:+36039302 | None:intergenic |
| GTGCTGCTCTTTGTGTTCAA+TGG | 0.424300 | 3.1:-36044847 | MS.gene82600:CDS |
| ATAGATTGGTCGAAGACAAA+TGG | 0.455768 | 3.1:-36046176 | MS.gene82600:CDS |
| GTGTTCTTGCTAGATATGTC+TGG | 0.457083 | 3.1:-36044922 | MS.gene82600:intron |
| TGAAGTTCACATCTATAGAT+TGG | 0.461455 | 3.1:-36046190 | MS.gene82600:CDS |
| GTATCATCTGGATCAAGATA+TGG | 0.468909 | 3.1:-36040523 | MS.gene82600:CDS |
| TTCCCACACCATACTTGGAT+TGG | 0.478929 | 3.1:+36039307 | None:intergenic |
| ATCATACCTCTTGGTGAGCA+TGG | 0.490694 | 3.1:-36039075 | MS.gene82600:CDS |
| TGTGTTCAATGGAGTCCAAA+AGG | 0.493426 | 3.1:-36044836 | MS.gene82600:intron |
| TGTAGTTCTATCATACCTCT+TGG | 0.495135 | 3.1:-36039084 | MS.gene82600:intron |
| ATCACGGAACACGACATTCT+GGG | 0.498335 | 3.1:+36040949 | None:intergenic |
| TAGATTGGTCGAAGACAAAT+GGG | 0.500826 | 3.1:-36046175 | MS.gene82600:CDS |
| AACAAGTTTGCAGTGGGAAG+TGG | 0.503387 | 3.1:-36044239 | MS.gene82600:CDS |
| AAAGGTGCATGTTCTTCAAA+AGG | 0.504464 | 3.1:-36046151 | MS.gene82600:intron |
| GAGCGGAAGACAGTATCATC+TGG | 0.508128 | 3.1:-36040535 | MS.gene82600:CDS |
| ATTATGAGCAGGAAAACAAC+TGG | 0.512153 | 3.1:-36044193 | MS.gene82600:intron |
| TGGATGGAAGAATTGCTGTA+TGG | 0.522720 | 3.1:-36038908 | MS.gene82600:CDS |
| GCAAGAATACCAACATTATC+GGG | 0.523262 | 3.1:+36042874 | None:intergenic |
| TACCAACTCTTGTTATCCTT+AGG | 0.525803 | 3.1:-36044877 | MS.gene82600:CDS |
| TTGTATATGCTATTATGAGC+AGG | 0.529086 | 3.1:-36044204 | MS.gene82600:CDS |
| AGATATGTCTGGAACCTTGA+AGG | 0.529442 | 3.1:-36044911 | MS.gene82600:CDS |
| GGATGGAAGAATTGCTGTAT+GGG | 0.529737 | 3.1:-36038907 | MS.gene82600:CDS |
| ATTATTTGTTTCTGAGAGAA+CGG | 0.529928 | 3.1:-36040800 | MS.gene82600:CDS |
| GAGCAGCACGGTTTAGCCTA+AGG | 0.537294 | 3.1:+36044861 | None:intergenic |
| ACTCATGTCTTTAATATTTG+GGG | 0.538210 | 3.1:+36045873 | None:intergenic |
| GAACCTTGAAGGATCAGAAT+GGG | 0.538758 | 3.1:-36044900 | MS.gene82600:CDS |
| TACTCTGCACTTCCCATCCG+TGG | 0.545713 | 3.1:+36041941 | None:intergenic |
| TTTCTTACCTACATAAGCTA+GGG | 0.545926 | 3.1:+36041379 | None:intergenic |
| AGCCTAAGGATAACAAGAGT+TGG | 0.549485 | 3.1:+36044875 | None:intergenic |
| ATGGGATTTGGAAAATGAGC+AGG | 0.551586 | 3.1:-36038889 | MS.gene82600:CDS |
| GGTCGAAGACAAATGGGAAA+AGG | 0.558159 | 3.1:-36046169 | MS.gene82600:CDS |
| GCAGAAAACAAGTTTGCAGT+GGG | 0.561048 | 3.1:-36044245 | MS.gene82600:intron |
| CCTGAAACTACAGGATTGGA+TGG | 0.561224 | 3.1:-36038924 | MS.gene82600:intron |
| GGCAGAAAACAAGTTTGCAG+TGG | 0.567517 | 3.1:-36044246 | MS.gene82600:intron |
| GGAACCTTGAAGGATCAGAA+TGG | 0.576474 | 3.1:-36044901 | MS.gene82600:CDS |
| GGCCAATCCAAGTATGGTGT+GGG | 0.581786 | 3.1:-36039309 | MS.gene82600:CDS |
| ACATTCTGGGCCAAAGGAGA+AGG | 0.582007 | 3.1:+36040962 | None:intergenic |
| AATAAGCTTATAATTCAAGA+AGG | 0.583387 | 3.1:+36038865 | None:intergenic |
| GAGAGAACGGTAATAGGTGT+GGG | 0.585251 | 3.1:-36040787 | MS.gene82600:CDS |
| CTTGCGACAACATCCACGGA+TGG | 0.586607 | 3.1:-36041954 | MS.gene82600:CDS |
| TGAGAGAACGGTAATAGGTG+TGG | 0.589873 | 3.1:-36040788 | MS.gene82600:CDS |
| TGGATCAAGATATGGCTCAC+AGG | 0.591647 | 3.1:-36040515 | MS.gene82600:intron |
| GGCAATACCCTAGCTTATGT+AGG | 0.594026 | 3.1:-36041386 | MS.gene82600:intron |
| TGGCCAATCCAAGTATGGTG+TGG | 0.598684 | 3.1:-36039310 | MS.gene82600:CDS |
| TTGCGACAACATCCACGGAT+GGG | 0.605771 | 3.1:-36041953 | MS.gene82600:CDS |
| TAAGCTAGGGTATTGCCACT+TGG | 0.608759 | 3.1:+36041392 | None:intergenic |
| AACACGACATTCTGGGCCAA+AGG | 0.611884 | 3.1:+36040956 | None:intergenic |
| TCTTCTTGCGACAACATCCA+CGG | 0.612313 | 3.1:-36041958 | MS.gene82600:CDS |
| ATCTGATATGAAATTTGGAG+AGG | 0.617391 | 3.1:-36041776 | MS.gene82600:intron |
| GGGATATGATTGTAACCCAA+TGG | 0.637775 | 3.1:-36040767 | MS.gene82600:CDS |
| CATCACGGAGAGGCAAATCA+CGG | 0.642366 | 3.1:+36040933 | None:intergenic |
| TTGTCAGGTATCTTGGAGAG+CGG | 0.646625 | 3.1:-36040552 | MS.gene82600:CDS |
| CTTGGACATTCGGAGTCAAG+TGG | 0.649894 | 3.1:-36041418 | MS.gene82600:CDS |
| ATTGAACACAAAGAGCAGCA+CGG | 0.658833 | 3.1:+36044849 | None:intergenic |
| AATGTTCCATGCTCACCAAG+AGG | 0.660956 | 3.1:+36039069 | None:intergenic |
| TGCTGACCCACATCACGGAG+AGG | 0.674971 | 3.1:+36040923 | None:intergenic |
| GTGAGCATGGAACATTGACA+AGG | 0.696012 | 3.1:-36039062 | MS.gene82600:CDS |
| GGAGTCAAGTGGTCACCAAG+TGG | 0.703568 | 3.1:-36041407 | MS.gene82600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 36038872 | 36046213 | 36038872 | ID=MS.gene82600 |
| chr3.1 | mRNA | 36038872 | 36046213 | 36038872 | ID=MS.gene82600.t1;Parent=MS.gene82600 |
| chr3.1 | exon | 36046152 | 36046213 | 36046152 | ID=MS.gene82600.t1.exon1;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36046152 | 36046213 | 36046152 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36045802 | 36045909 | 36045802 | ID=MS.gene82600.t1.exon2;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36045802 | 36045909 | 36045802 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36044837 | 36044931 | 36044837 | ID=MS.gene82600.t1.exon3;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36044837 | 36044931 | 36044837 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36044194 | 36044263 | 36044194 | ID=MS.gene82600.t1.exon4;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36044194 | 36044263 | 36044194 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36042888 | 36042957 | 36042888 | ID=MS.gene82600.t1.exon5;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36042888 | 36042957 | 36042888 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36041909 | 36041982 | 36041909 | ID=MS.gene82600.t1.exon6;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36041909 | 36041982 | 36041909 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36041777 | 36041816 | 36041777 | ID=MS.gene82600.t1.exon7;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36041777 | 36041816 | 36041777 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36041387 | 36041468 | 36041387 | ID=MS.gene82600.t1.exon8;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36041387 | 36041468 | 36041387 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36040934 | 36041022 | 36040934 | ID=MS.gene82600.t1.exon9;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36040934 | 36041022 | 36040934 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36040739 | 36040824 | 36040739 | ID=MS.gene82600.t1.exon10;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36040739 | 36040824 | 36040739 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36040516 | 36040579 | 36040516 | ID=MS.gene82600.t1.exon11;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36040516 | 36040579 | 36040516 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36039252 | 36039358 | 36039252 | ID=MS.gene82600.t1.exon12;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36039252 | 36039358 | 36039252 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36039046 | 36039101 | 36039046 | ID=MS.gene82600.t1.exon13;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36039046 | 36039101 | 36039046 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| chr3.1 | exon | 36038872 | 36038933 | 36038872 | ID=MS.gene82600.t1.exon14;Parent=MS.gene82600.t1 |
| chr3.1 | CDS | 36038872 | 36038933 | 36038872 | ID=cds.MS.gene82600.t1;Parent=MS.gene82600.t1 |
| Gene Sequence |
| Protein sequence |
