Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86038.t1 | XP_003618547.1 | 98.6 | 221 | 3 | 0 | 1 | 221 | 1 | 221 | 6.60E-110 | 406.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86038.t1 | Q9LVP9 | 74.7 | 221 | 56 | 0 | 1 | 221 | 1 | 221 | 1.2e-86 | 320.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86038.t1 | G7KKZ4 | 98.6 | 221 | 3 | 0 | 1 | 221 | 1 | 221 | 4.8e-110 | 406.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene86038 | 0.824835 | 6.51E-54 | -1.69E-46 |
| MS.gene04919 | MS.gene86038 | 0.820036 | 8.48E-53 | -1.69E-46 |
| MS.gene04920 | MS.gene86038 | 0.845756 | 3.33E-59 | -1.69E-46 |
| MS.gene049283 | MS.gene86038 | 0.869417 | 3.15E-66 | -1.69E-46 |
| MS.gene049368 | MS.gene86038 | 0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene049411 | MS.gene86038 | 0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene86038 | 0.828114 | 1.08E-54 | -1.69E-46 |
| MS.gene049680 | MS.gene86038 | 0.841338 | 5.05E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene86038 | 0.83511 | 2.03E-56 | -1.69E-46 |
| MS.gene04998 | MS.gene86038 | 0.830918 | 2.24E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene86038 | 0.813483 | 2.50E-51 | -1.69E-46 |
| MS.gene050384 | MS.gene86038 | 0.801766 | 7.71E-49 | -1.69E-46 |
| MS.gene050386 | MS.gene86038 | 0.804916 | 1.72E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene86038 | 0.850368 | 1.78E-60 | -1.69E-46 |
| MS.gene050646 | MS.gene86038 | 0.856123 | 3.98E-62 | -1.69E-46 |
| MS.gene050654 | MS.gene86038 | 0.813506 | 2.47E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene86038 | 0.832032 | 1.19E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene86038 | 0.819394 | 1.19E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene86038 | 0.886722 | 2.67E-72 | -1.69E-46 |
| MS.gene050955 | MS.gene86038 | 0.824682 | 7.07E-54 | -1.69E-46 |
| MS.gene051003 | MS.gene86038 | 0.860395 | 2.13E-63 | -1.69E-46 |
| MS.gene051043 | MS.gene86038 | 0.851441 | 8.86E-61 | -1.69E-46 |
| MS.gene051154 | MS.gene86038 | 0.802047 | 6.75E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene86038 | 0.842612 | 2.33E-58 | -1.69E-46 |
| MS.gene051343 | MS.gene86038 | 0.847558 | 1.07E-59 | -1.69E-46 |
| MS.gene051597 | MS.gene86038 | 0.805765 | 1.14E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene86038 | 0.889132 | 3.18E-73 | -1.69E-46 |
| MS.gene051902 | MS.gene86038 | 0.847569 | 1.06E-59 | -1.69E-46 |
| MS.gene051975 | MS.gene86038 | 0.808526 | 2.97E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene86038 | 0.846187 | 2.54E-59 | -1.69E-46 |
| MS.gene052239 | MS.gene86038 | -0.807751 | 4.34E-50 | -1.69E-46 |
| MS.gene052242 | MS.gene86038 | -0.829992 | 3.77E-55 | -1.69E-46 |
| MS.gene052296 | MS.gene86038 | 0.826532 | 2.58E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene86038 | 0.820604 | 6.28E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene86038 | 0.813353 | 2.67E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene86038 | 0.839626 | 1.42E-57 | -1.69E-46 |
| MS.gene052793 | MS.gene86038 | 0.868543 | 6.04E-66 | -1.69E-46 |
| MS.gene052818 | MS.gene86038 | -0.804572 | 2.03E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene86038 | 0.839388 | 1.63E-57 | -1.69E-46 |
| MS.gene053228 | MS.gene86038 | 0.829763 | 4.29E-55 | -1.69E-46 |
| MS.gene053272 | MS.gene86038 | -0.809897 | 1.51E-50 | -1.69E-46 |
| MS.gene053298 | MS.gene86038 | 0.820964 | 5.19E-53 | -1.69E-46 |
| MS.gene053456 | MS.gene86038 | 0.810931 | 9.02E-51 | -1.69E-46 |
| MS.gene053564 | MS.gene86038 | 0.814071 | 1.86E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene86038 | 0.817178 | 3.77E-52 | -1.69E-46 |
| MS.gene053879 | MS.gene86038 | 0.852446 | 4.59E-61 | -1.69E-46 |
| MS.gene053931 | MS.gene86038 | 0.809613 | 1.74E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene86038 | 0.830924 | 2.23E-55 | -1.69E-46 |
| MS.gene054004 | MS.gene86038 | 0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene86038 | 0.833 | 6.86E-56 | -1.69E-46 |
| MS.gene054222 | MS.gene86038 | 0.858716 | 6.80E-63 | -1.69E-46 |
| MS.gene054403 | MS.gene86038 | 0.838374 | 2.99E-57 | -1.69E-46 |
| MS.gene054413 | MS.gene86038 | 0.85318 | 2.83E-61 | -1.69E-46 |
| MS.gene054892 | MS.gene86038 | 0.814198 | 1.74E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene86038 | 0.821073 | 4.90E-53 | -1.69E-46 |
| MS.gene054957 | MS.gene86038 | 0.833185 | 6.17E-56 | -1.69E-46 |
| MS.gene055150 | MS.gene86038 | 0.814213 | 1.73E-51 | -1.69E-46 |
| MS.gene055229 | MS.gene86038 | 0.804141 | 2.49E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene86038 | 0.804493 | 2.10E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene86038 | 0.812838 | 3.47E-51 | -1.69E-46 |
| MS.gene056082 | MS.gene86038 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene86038 | 0.810629 | 1.05E-50 | -1.69E-46 |
| MS.gene056677 | MS.gene86038 | 0.823265 | 1.52E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene86038 | 0.816161 | 6.38E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene86038 | 0.804494 | 2.10E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene86038 | 0.809722 | 1.64E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene86038 | 0.867672 | 1.15E-65 | -1.69E-46 |
| MS.gene057208 | MS.gene86038 | 0.821554 | 3.80E-53 | -1.69E-46 |
| MS.gene057576 | MS.gene86038 | 0.818763 | 1.65E-52 | -1.69E-46 |
| MS.gene057584 | MS.gene86038 | 0.802487 | 5.48E-49 | -1.69E-46 |
| MS.gene057586 | MS.gene86038 | 0.803342 | 3.65E-49 | -1.69E-46 |
| MS.gene057622 | MS.gene86038 | 0.827005 | 1.99E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene86038 | 0.801592 | 8.37E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene86038 | 0.843837 | 1.10E-58 | -1.69E-46 |
| MS.gene057890 | MS.gene86038 | -0.822201 | 2.69E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene86038 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene86038 | 0.845837 | 3.17E-59 | -1.69E-46 |
| MS.gene058008 | MS.gene86038 | 0.827875 | 1.23E-54 | -1.69E-46 |
| MS.gene058074 | MS.gene86038 | 0.823949 | 1.05E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene86038 | 0.815792 | 7.71E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene86038 | 0.866146 | 3.53E-65 | -1.69E-46 |
| MS.gene058261 | MS.gene86038 | 0.820611 | 6.26E-53 | -1.69E-46 |
| MS.gene058279 | MS.gene86038 | 0.853521 | 2.26E-61 | -1.69E-46 |
| MS.gene058330 | MS.gene86038 | 0.814415 | 1.56E-51 | -1.69E-46 |
| MS.gene058592 | MS.gene86038 | 0.833108 | 6.44E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene86038 | 0.809576 | 1.77E-50 | -1.69E-46 |
| MS.gene05878 | MS.gene86038 | 0.801505 | 8.73E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene86038 | 0.866523 | 2.68E-65 | -1.69E-46 |
| MS.gene05952 | MS.gene86038 | 0.858259 | 9.32E-63 | -1.69E-46 |
| MS.gene05985 | MS.gene86038 | -0.858419 | 8.34E-63 | -1.69E-46 |
| MS.gene059901 | MS.gene86038 | -0.813367 | 2.65E-51 | -1.69E-46 |
| MS.gene06018 | MS.gene86038 | 0.822803 | 1.95E-53 | -1.69E-46 |
| MS.gene060244 | MS.gene86038 | 0.807602 | 4.66E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene86038 | 0.820921 | 5.31E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene86038 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene060527 | MS.gene86038 | 0.812185 | 4.82E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene86038 | 0.816126 | 6.49E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene86038 | 0.833521 | 5.08E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene86038 | 0.842757 | 2.13E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene86038 | 0.861705 | 8.50E-64 | -1.69E-46 |
| MS.gene061100 | MS.gene86038 | 0.874814 | 5.03E-68 | -1.69E-46 |
| MS.gene061160 | MS.gene86038 | 0.836062 | 1.17E-56 | -1.69E-46 |
| MS.gene061188 | MS.gene86038 | 0.804642 | 1.96E-49 | -1.69E-46 |
| MS.gene061243 | MS.gene86038 | 0.802563 | 5.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86038.t1 | MTR_6g012860 | 98.643 | 221 | 3 | 0 | 1 | 221 | 1 | 221 | 3.14e-162 | 447 |
| MS.gene86038.t1 | MTR_7g011570 | 82.805 | 221 | 38 | 0 | 1 | 221 | 1 | 221 | 3.32e-135 | 379 |
| MS.gene86038.t1 | MTR_7g011570 | 82.805 | 221 | 38 | 0 | 1 | 221 | 83 | 303 | 8.76e-134 | 378 |
| MS.gene86038.t1 | MTR_3g037380 | 68.636 | 220 | 69 | 0 | 1 | 220 | 1 | 220 | 2.64e-114 | 325 |
| MS.gene86038.t1 | MTR_5g042530 | 63.182 | 220 | 80 | 1 | 1 | 219 | 1 | 220 | 8.28e-103 | 296 |
| MS.gene86038.t1 | MTR_3g037380 | 67.273 | 165 | 54 | 0 | 55 | 219 | 1 | 165 | 3.73e-80 | 237 |
| MS.gene86038.t1 | MTR_5g042530 | 62.424 | 165 | 62 | 0 | 55 | 219 | 1 | 165 | 9.21e-74 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86038.t1 | AT3G29100 | 74.661 | 221 | 56 | 0 | 1 | 221 | 1 | 221 | 2.46e-125 | 353 |
| MS.gene86038.t1 | AT5G39510 | 74.661 | 221 | 56 | 0 | 1 | 221 | 1 | 221 | 8.42e-117 | 332 |
| MS.gene86038.t1 | AT1G26670 | 65.909 | 220 | 74 | 1 | 1 | 219 | 1 | 220 | 5.69e-108 | 310 |
| MS.gene86038.t1 | AT3G29100 | 74.706 | 170 | 43 | 0 | 52 | 221 | 26 | 195 | 1.96e-93 | 272 |
| MS.gene86038.t1 | AT3G29100 | 75.449 | 167 | 41 | 0 | 55 | 221 | 1 | 167 | 2.43e-92 | 268 |
| MS.gene86038.t1 | AT3G29100 | 75.449 | 167 | 41 | 0 | 55 | 221 | 1 | 167 | 2.43e-92 | 268 |
| MS.gene86038.t1 | AT3G29100 | 75.449 | 167 | 41 | 0 | 55 | 221 | 1 | 167 | 2.43e-92 | 268 |
| MS.gene86038.t1 | AT5G39630 | 45.249 | 221 | 107 | 2 | 1 | 221 | 1 | 207 | 3.90e-57 | 180 |
Find 38 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGTACGCCCTTGATATT+TGG | 0.266172 | 6.3:+8148330 | None:intergenic |
| TATGCTCACTTGCAGCTTCA+TGG | 0.345802 | 6.3:-8147346 | MS.gene86038:intron |
| GAAGTTAAGAAAATTGTATC+TGG | 0.358519 | 6.3:-8148261 | MS.gene86038:CDS |
| ATTTAACAAGTTTGAAGTAT+AGG | 0.376074 | 6.3:+8147203 | None:intergenic |
| ACTGCAGCTACAGCTCTTAA+TGG | 0.384286 | 6.3:-8151186 | MS.gene86038:CDS |
| CGGGATGAATTGTTGGAATC+AGG | 0.384558 | 6.3:-8148219 | MS.gene86038:CDS |
| CGTACTTCTTGCTAAGTTGC+GGG | 0.400581 | 6.3:-8148316 | MS.gene86038:CDS |
| AATTGATGAAGCAGAGGCTT+TGG | 0.405885 | 6.3:-8148470 | MS.gene86038:intron |
| CAAGACTGGTGAACGAGTTA+AGG | 0.419278 | 6.3:-8148032 | MS.gene86038:CDS |
| TTCTGCACGGGATGAATTGT+TGG | 0.425706 | 6.3:-8148226 | MS.gene86038:CDS |
| AACAAGAACAAGTGGATCAT+TGG | 0.431646 | 6.3:-8147265 | MS.gene86038:CDS |
| TTATGACAAACATGTCTAGA+AGG | 0.449390 | 6.3:-8147291 | MS.gene86038:CDS |
| TGGCTGCATTGTGCTCGTCC+TGG | 0.452609 | 6.3:-8147245 | MS.gene86038:CDS |
| AATAGAAACACCTAGCTCTT+CGG | 0.477415 | 6.3:+8147985 | None:intergenic |
| GGATAGTAGGAGAACAATGT+TGG | 0.477424 | 6.3:-8148011 | MS.gene86038:CDS |
| GCTGTAAACTTCTTGCCTCA+AGG | 0.487755 | 6.3:+8148352 | None:intergenic |
| AAGTTTACAGCCAAATATCA+AGG | 0.491164 | 6.3:-8148340 | MS.gene86038:CDS |
| AGAATGAGTAACGTGTTTGA+AGG | 0.491550 | 6.3:-8151258 | MS.gene86038:CDS |
| GTCGCTGTGAATGCAAATCT+TGG | 0.499632 | 6.3:+8147960 | None:intergenic |
| GTGAACGAGTTAAGGATAGT+AGG | 0.508845 | 6.3:-8148024 | MS.gene86038:CDS |
| GCGTACTTCTTGCTAAGTTG+CGG | 0.526345 | 6.3:-8148317 | MS.gene86038:CDS |
| AACAATTCATCCCGTGCAGA+AGG | 0.532426 | 6.3:+8148228 | None:intergenic |
| AAAGTTTCGGAAGTAAAGGC+TGG | 0.543764 | 6.3:-8148493 | MS.gene86038:CDS |
| AAACTTGAATCCTTCTGCAC+GGG | 0.560531 | 6.3:-8148238 | MS.gene86038:CDS |
| ACTGAGAGGTTGAACAAGAC+TGG | 0.566247 | 6.3:-8148046 | MS.gene86038:CDS |
| GAAGGATGAACAAGAACAAG+TGG | 0.577885 | 6.3:-8147273 | MS.gene86038:CDS |
| GAAACTTGAATCCTTCTGCA+CGG | 0.597232 | 6.3:-8148239 | MS.gene86038:CDS |
| GGCTGGAATTGATGAAGCAG+AGG | 0.608179 | 6.3:-8148476 | MS.gene86038:CDS |
| TGAATTGTTGGAATCAGGCA+TGG | 0.618002 | 6.3:-8148214 | MS.gene86038:CDS |
| CATGGCGTGGATGATAACAT+AGG | 0.620321 | 6.3:-8147328 | MS.gene86038:CDS |
| ATGTTGGAAACCGAAGAGCT+AGG | 0.633551 | 6.3:-8147995 | MS.gene86038:CDS |
| AGTTTACAGCCAAATATCAA+GGG | 0.635893 | 6.3:-8148339 | MS.gene86038:CDS |
| TCACTTGCAGCTTCATGGCG+TGG | 0.637480 | 6.3:-8147341 | MS.gene86038:intron |
| TAGCAATGATAGCAACAACC+AGG | 0.682704 | 6.3:+8147227 | None:intergenic |
| TCTACTGCATGCTCATAACA+CGG | 0.687436 | 6.3:-8147933 | MS.gene86038:intron |
| AGGCATGGCAGATACTATGA+CGG | 0.691237 | 6.3:-8148199 | MS.gene86038:intron |
| GCAGCTACAGCTCTTAATGG+AGG | 0.704927 | 6.3:-8151183 | MS.gene86038:intron |
| GATTAATGACATCAACTGAG+AGG | 0.717585 | 6.3:-8148060 | MS.gene86038:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAGAAAAAAATAAAAAAT+TGG | - | chr6.3:8148212-8148231 | MS.gene86038:CDS | 10.0% |
| !! | TTAAAATTGAGTATAAAATA+GGG | - | chr6.3:8147653-8147672 | MS.gene86038:intron | 10.0% |
| !!! | AATCAAAAAAAATATTTTAC+AGG | + | chr6.3:8148126-8148145 | None:intergenic | 10.0% |
| !!! | ATACTAGTATTATTATTTTT+TGG | + | chr6.3:8148826-8148845 | None:intergenic | 10.0% |
| !!! | ATCAAAAAAAATATTTTACA+GGG | + | chr6.3:8148125-8148144 | None:intergenic | 10.0% |
| !!! | ATTTATACTTTTTTTTAGAT+AGG | + | chr6.3:8149441-8149460 | None:intergenic | 10.0% |
| !!! | CTAAAAAAAAGTATAAATTT+GGG | - | chr6.3:8149443-8149462 | MS.gene86038:intron | 10.0% |
| !!! | CTAATTGATAATTAAATTTT+GGG | + | chr6.3:8148366-8148385 | None:intergenic | 10.0% |
| !!! | TCTAAAAAAAAGTATAAATT+TGG | - | chr6.3:8149442-8149461 | MS.gene86038:intron | 10.0% |
| !!! | TCTAATTGATAATTAAATTT+TGG | + | chr6.3:8148367-8148386 | None:intergenic | 10.0% |
| !!! | TTTAAAATTGAGTATAAAAT+AGG | - | chr6.3:8147652-8147671 | MS.gene86038:intron | 10.0% |
| !!! | TTTCGTTTTTAAAAATTTAA+GGG | - | chr6.3:8148052-8148071 | MS.gene86038:CDS | 10.0% |
| !!! | TTTTCGTTTTTAAAAATTTA+AGG | - | chr6.3:8148051-8148070 | MS.gene86038:CDS | 10.0% |
| !! | AAAGAGAAATTAGATAAATT+TGG | + | chr6.3:8149554-8149573 | None:intergenic | 15.0% |
| !! | AAGAGAAATTAGATAAATTT+GGG | + | chr6.3:8149553-8149572 | None:intergenic | 15.0% |
| !! | AATCAAAAAAAATATTTGAC+AGG | - | chr6.3:8148291-8148310 | MS.gene86038:CDS | 15.0% |
| !! | ATCAAAAAAAATATTTGACA+GGG | - | chr6.3:8148292-8148311 | MS.gene86038:CDS | 15.0% |
| !! | ATTTCCAACTATAATATTAA+AGG | + | chr6.3:8150755-8150774 | None:intergenic | 15.0% |
| !! | TTTAAAAATTTAAGGGTTAA+TGG | - | chr6.3:8148059-8148078 | MS.gene86038:CDS | 15.0% |
| !!! | AAAACAAAAATATTTTACAG+GGG | - | chr6.3:8148265-8148284 | MS.gene86038:CDS | 15.0% |
| !!! | AAAACAAAAATATTTTACAG+GGG | + | chr6.3:8148284-8148265 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTTCAAAAATTC+TGG | + | chr6.3:8148205-8148224 | None:intergenic | 15.0% |
| !!! | CAAAACAAAAATATTTTACA+GGG | - | chr6.3:8148264-8148283 | MS.gene86038:CDS | 15.0% |
| !!! | CAAAACAAAAATATTTTACA+GGG | + | chr6.3:8148283-8148264 | None:intergenic | 15.0% |
| !!! | TCAAAACAAAAATATTTTAC+AGG | - | chr6.3:8148263-8148282 | MS.gene86038:CDS | 15.0% |
| !!! | TCAAAACAAAAATATTTTAC+AGG | + | chr6.3:8148282-8148263 | None:intergenic | 15.0% |
| !!! | TGTTTTTATAGCATTTATAT+GGG | + | chr6.3:8148622-8148641 | None:intergenic | 15.0% |
| !! | ATGTTGAATGATATTACTAA+TGG | + | chr6.3:8149209-8149228 | None:intergenic | 20.0% |
| !! | GTTTCCTTTAATATTATAGT+TGG | - | chr6.3:8150748-8150767 | MS.gene86038:intron | 20.0% |
| !! | TCGATTCTACAAAATTAATT+GGG | + | chr6.3:8148752-8148771 | None:intergenic | 20.0% |
| !! | TGTTGAATGATATTACTAAT+GGG | + | chr6.3:8149208-8149227 | None:intergenic | 20.0% |
| !! | TTACATCCATTATTTAAACT+CGG | + | chr6.3:8147501-8147520 | None:intergenic | 20.0% |
| !!! | AAACAAAAATATTTTACAGG+GGG | - | chr6.3:8148266-8148285 | MS.gene86038:CDS | 20.0% |
| !!! | AAACAAAAATATTTTACAGG+GGG | + | chr6.3:8148285-8148266 | None:intergenic | 20.0% |
| !!! | AATAGGGAAATTCTTTTATA+AGG | - | chr6.3:8147855-8147874 | MS.gene86038:intron | 20.0% |
| !!! | AATCAACAAAAAAAACCTTT+TGG | + | chr6.3:8150947-8150966 | None:intergenic | 20.0% |
| !!! | AATTAATTTTGTAGAATCGA+GGG | - | chr6.3:8148752-8148771 | MS.gene86038:intron | 20.0% |
| !!! | AATTTCCCTATTCTATTTTT+TGG | + | chr6.3:8147847-8147866 | None:intergenic | 20.0% |
| !!! | ACTTTGTTTTGATTTTTCAA+TGG | - | chr6.3:8147297-8147316 | MS.gene86038:CDS | 20.0% |
| !!! | ATAGGGAAATTCTTTTATAA+GGG | - | chr6.3:8147856-8147875 | MS.gene86038:intron | 20.0% |
| !!! | ATTTAACAAGTTTGAAGTAT+AGG | + | chr6.3:8151256-8151275 | None:intergenic | 20.0% |
| !!! | ATTTCCCTATTCTATTTTTT+GGG | + | chr6.3:8147846-8147865 | None:intergenic | 20.0% |
| !!! | GTGTTTTTATAGCATTTATA+TGG | + | chr6.3:8148623-8148642 | None:intergenic | 20.0% |
| !!! | TAGCTCCTATTATTTTTATT+TGG | - | chr6.3:8148551-8148570 | MS.gene86038:intron | 20.0% |
| !!! | TTTTCTTAACTTCACTTTTA+AGG | + | chr6.3:8150188-8150207 | None:intergenic | 20.0% |
| ! | AAAAACTACTACTAGATAGT+TGG | + | chr6.3:8150690-8150709 | None:intergenic | 25.0% |
| ! | AAACTTTCATAAACCATGTT+AGG | + | chr6.3:8150833-8150852 | None:intergenic | 25.0% |
| ! | AAATTAGATAAATTTGGGAG+AGG | + | chr6.3:8149548-8149567 | None:intergenic | 25.0% |
| ! | AACAACTGGTTACAAAAAAA+GGG | + | chr6.3:8147981-8148000 | None:intergenic | 25.0% |
| ! | AACAATGTATGGTTAGAAAA+AGG | - | chr6.3:8148932-8148951 | MS.gene86038:intron | 25.0% |
| ! | AAGACCCAAAAAATAGAATA+GGG | - | chr6.3:8147839-8147858 | MS.gene86038:intron | 25.0% |
| ! | ACCAAAAAGAACAAAAACAA+GGG | + | chr6.3:8149718-8149737 | None:intergenic | 25.0% |
| ! | ACTTAAAAGATGAATCGTTT+GGG | - | chr6.3:8147470-8147489 | MS.gene86038:intron | 25.0% |
| ! | AGAGAAATTAGGAAAATCAA+GGG | + | chr6.3:8149169-8149188 | None:intergenic | 25.0% |
| ! | ATAACACGACAAAAATTAGT+TGG | + | chr6.3:8148518-8148537 | None:intergenic | 25.0% |
| ! | ATAATCAAGTTAACAATCCA+AGG | + | chr6.3:8149304-8149323 | None:intergenic | 25.0% |
| ! | CCTGACCAAATAAAAATAAT+AGG | + | chr6.3:8148559-8148578 | None:intergenic | 25.0% |
| ! | CTCGATTCTACAAAATTAAT+TGG | + | chr6.3:8148753-8148772 | None:intergenic | 25.0% |
| ! | GAAGTTAAGAAAATTGTATC+TGG | - | chr6.3:8150195-8150214 | MS.gene86038:intron | 25.0% |
| ! | GAATTTGTAGATTCGAAAAA+TGG | - | chr6.3:8150080-8150099 | MS.gene86038:intron | 25.0% |
| ! | GCTCTATAGTAATTTCTATA+TGG | - | chr6.3:8150609-8150628 | MS.gene86038:intron | 25.0% |
| ! | TAACATGGTTTATGAAAGTT+TGG | - | chr6.3:8150832-8150851 | MS.gene86038:intron | 25.0% |
| ! | TAAGACCCAAAAAATAGAAT+AGG | - | chr6.3:8147838-8147857 | MS.gene86038:intron | 25.0% |
| ! | TACATCCATTATTTAAACTC+GGG | + | chr6.3:8147500-8147519 | None:intergenic | 25.0% |
| ! | TAGAGAAATTAGGAAAATCA+AGG | + | chr6.3:8149170-8149189 | None:intergenic | 25.0% |
| ! | TCATGAATATGTTAAACTCA+GGG | + | chr6.3:8149817-8149836 | None:intergenic | 25.0% |
| ! | TTACTTACTTTGTGTATAGT+TGG | - | chr6.3:8150976-8150995 | MS.gene86038:intron | 25.0% |
| ! | TTCATGAATATGTTAAACTC+AGG | + | chr6.3:8149818-8149837 | None:intergenic | 25.0% |
| !! | AAAAAGTATAAATTTGGGAG+AGG | - | chr6.3:8149448-8149467 | MS.gene86038:intron | 25.0% |
| !! | AACTATCTAGTAGTAGTTTT+TGG | - | chr6.3:8150689-8150708 | MS.gene86038:intron | 25.0% |
| !! | ATTCTTTTATAAGGGTTCAT+AGG | - | chr6.3:8147864-8147883 | MS.gene86038:intron | 25.0% |
| !! | CAATTAATTTTGTAGAATCG+AGG | - | chr6.3:8148751-8148770 | MS.gene86038:intron | 25.0% |
| !! | TTCTTTTATAAGGGTTCATA+GGG | - | chr6.3:8147865-8147884 | MS.gene86038:intron | 25.0% |
| !! | TTTTGATATGGATATGGATA+TGG | + | chr6.3:8147923-8147942 | None:intergenic | 25.0% |
| !!! | ATTTTTGAAGCATTAGCTAT+AGG | - | chr6.3:8149849-8149868 | MS.gene86038:intron | 25.0% |
| !!! | CCTATTATTTTTATTTGGTC+AGG | - | chr6.3:8148556-8148575 | MS.gene86038:intron | 25.0% |
| !!! | TAGAAAAAATGGGGTATTTT+TGG | - | chr6.3:8148904-8148923 | MS.gene86038:intron | 25.0% |
| !!! | TATTTTTATTTGGTCAGGAT+TGG | - | chr6.3:8148561-8148580 | MS.gene86038:intron | 25.0% |
| !!! | TTTTGGAGAAAAACAATGTA+TGG | - | chr6.3:8148921-8148940 | MS.gene86038:intron | 25.0% |
| AAAATGACCTATATTACAGG+GGG | + | chr6.3:8148092-8148111 | None:intergenic | 30.0% | |
| AAAATTGCAAGCAAGATAGA+GGG | - | chr6.3:8148794-8148813 | MS.gene86038:intron | 30.0% | |
| AAACTTTCACCACTACAATT+CGG | + | chr6.3:8151068-8151087 | None:intergenic | 30.0% | |
| AAGTTTACAGCCAAATATCA+AGG | - | chr6.3:8150116-8150135 | MS.gene86038:intron | 30.0% | |
| AATAAAGCCATCTTTCTGAA+AGG | + | chr6.3:8150027-8150046 | None:intergenic | 30.0% | |
| AATGGCATATAGCATGAATT+AGG | - | chr6.3:8148418-8148437 | MS.gene86038:intron | 30.0% | |
| AATTAGTGATTGAGCTTAAG+TGG | - | chr6.3:8147435-8147454 | MS.gene86038:intron | 30.0% | |
| AATTTCTATATGGCTTATGC+TGG | - | chr6.3:8150619-8150638 | MS.gene86038:intron | 30.0% | |
| ACAGTAGTCATAGAGAAATT+AGG | + | chr6.3:8149180-8149199 | None:intergenic | 30.0% | |
| ACATAGTAATACTAGAACAG+TGG | - | chr6.3:8148852-8148871 | MS.gene86038:intron | 30.0% | |
| AGAATCCCGATTAATGTAAT+GGG | + | chr6.3:8149025-8149044 | None:intergenic | 30.0% | |
| AGTTTACAGCCAAATATCAA+GGG | - | chr6.3:8150117-8150136 | MS.gene86038:intron | 30.0% | |
| ATACCTAATGCAATCACAAA+GGG | + | chr6.3:8150358-8150377 | None:intergenic | 30.0% | |
| ATCTACAACATACTATACAG+AGG | + | chr6.3:8148015-8148034 | None:intergenic | 30.0% | |
| CACTTAAAAGATGAATCGTT+TGG | - | chr6.3:8147469-8147488 | MS.gene86038:intron | 30.0% | |
| CGAAAATGACCTATATTACA+GGG | + | chr6.3:8148094-8148113 | None:intergenic | 30.0% | |
| CTTAAAAGATGAATCGTTTG+GGG | - | chr6.3:8147471-8147490 | MS.gene86038:intron | 30.0% | |
| GAAAATGACCTATATTACAG+GGG | + | chr6.3:8148093-8148112 | None:intergenic | 30.0% | |
| GAAATTAAAAACCATTCTCG+TGG | - | chr6.3:8150770-8150789 | MS.gene86038:intron | 30.0% | |
| GAACAACTGGTTACAAAAAA+AGG | + | chr6.3:8147982-8148001 | None:intergenic | 30.0% | |
| GACCAAAAAGAACAAAAACA+AGG | + | chr6.3:8149719-8149738 | None:intergenic | 30.0% | |
| GAGAAATTAGGAAAATCAAG+GGG | + | chr6.3:8149168-8149187 | None:intergenic | 30.0% | |
| GCAAAAGAAGCAAAAAGTTT+CGG | - | chr6.3:8149950-8149969 | MS.gene86038:intron | 30.0% | |
| TAAAATCCAACCAAAACAAG+CGG | + | chr6.3:8147946-8147965 | None:intergenic | 30.0% | |
| TAAAATTGCAAGCAAGATAG+AGG | - | chr6.3:8148793-8148812 | MS.gene86038:intron | 30.0% | |
| TAACAATCCAAGGAAATGAA+GGG | + | chr6.3:8149294-8149313 | None:intergenic | 30.0% | |
| TAGAATCCCGATTAATGTAA+TGG | + | chr6.3:8149026-8149045 | None:intergenic | 30.0% | |
| TCTACAACATACTATACAGA+GGG | + | chr6.3:8148014-8148033 | None:intergenic | 30.0% | |
| TGAAAACTAAGTTTGAATCC+TGG | - | chr6.3:8147736-8147755 | MS.gene86038:intron | 30.0% | |
| TGGATGTGGTTAGAAAAAAT+GGG | - | chr6.3:8148894-8148913 | MS.gene86038:intron | 30.0% | |
| TTAACAATCCAAGGAAATGA+AGG | + | chr6.3:8149295-8149314 | None:intergenic | 30.0% | |
| TTACAAAAAAAGGGATGGAT+TGG | + | chr6.3:8147972-8147991 | None:intergenic | 30.0% | |
| TTATGACAAACATGTCTAGA+AGG | - | chr6.3:8151165-8151184 | MS.gene86038:intron | 30.0% | |
| TTGAATTTCAGCTCAAGTAA+AGG | - | chr6.3:8150891-8150910 | MS.gene86038:intron | 30.0% | |
| ! | AAATTTTACAACCATTGACC+GGG | - | chr6.3:8147676-8147695 | MS.gene86038:intron | 30.0% |
| ! | AATCGTATATTCGACGATTT+TGG | - | chr6.3:8149076-8149095 | MS.gene86038:intron | 30.0% |
| ! | ACAATCAAACTTTTATCCTC+TGG | - | chr6.3:8149135-8149154 | MS.gene86038:intron | 30.0% |
| ! | ACCTTTCTTTGACTTACTTT+GGG | - | chr6.3:8148386-8148405 | MS.gene86038:intron | 30.0% |
| ! | ATCGTATATTCGACGATTTT+GGG | - | chr6.3:8149077-8149096 | MS.gene86038:intron | 30.0% |
| ! | CAAACGATTCATCTTTTAAG+TGG | + | chr6.3:8147471-8147490 | None:intergenic | 30.0% |
| ! | GAAATTTTACAACCATTGAC+CGG | - | chr6.3:8147675-8147694 | MS.gene86038:intron | 30.0% |
| ! | GGTTTTTGAATGACCTATTA+GGG | - | chr6.3:8148233-8148252 | MS.gene86038:CDS | 30.0% |
| ! | GGTTTTTGAATGACCTATTA+GGG | + | chr6.3:8148252-8148233 | None:intergenic | 30.0% |
| ! | GTTTCTCTTTGATTTACTGA+TGG | - | chr6.3:8151084-8151103 | MS.gene86038:intron | 30.0% |
| ! | GTTTTTGAATGACCTATTAG+GGG | - | chr6.3:8148234-8148253 | MS.gene86038:CDS | 30.0% |
| ! | GTTTTTGAATGACCTATTAG+GGG | + | chr6.3:8148253-8148234 | None:intergenic | 30.0% |
| ! | TGGTTTTTGAATGACCTATT+AGG | - | chr6.3:8148232-8148251 | MS.gene86038:CDS | 30.0% |
| ! | TGGTTTTTGAATGACCTATT+AGG | + | chr6.3:8148251-8148232 | None:intergenic | 30.0% |
| ! | TTTGCTGTGAAAATACTATG+AGG | - | chr6.3:8150316-8150335 | MS.gene86038:intron | 30.0% |
| ! | TTTTCTTCCTTTCAGAAAGA+TGG | - | chr6.3:8150017-8150036 | MS.gene86038:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | - | chr6.3:8148235-8148254 | MS.gene86038:CDS | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | + | chr6.3:8148254-8148235 | None:intergenic | 30.0% |
| !! | AACATTTTAGCATGTTGTCA+GGG | - | chr6.3:8149224-8149243 | MS.gene86038:intron | 30.0% |
| !! | ATAATGGATGTAACGATCAT+TGG | - | chr6.3:8147508-8147527 | MS.gene86038:intron | 30.0% |
| !! | CCTGTAATATAGGTCATTTT+CGG | - | chr6.3:8148092-8148111 | MS.gene86038:intron | 30.0% |
| !! | CGGTAATCTTTTCTATTTCT+TGG | - | chr6.3:8150543-8150562 | MS.gene86038:intron | 30.0% |
| !! | CTTCAAGTTGGAAGATTAAT+TGG | - | chr6.3:8149629-8149648 | MS.gene86038:intron | 30.0% |
| !! | GCTACACATCAATACTTTTT+CGG | + | chr6.3:8148474-8148493 | None:intergenic | 30.0% |
| !! | GGATTTGTTAATTCCTAACA+TGG | - | chr6.3:8150817-8150836 | MS.gene86038:intron | 30.0% |
| !! | GTTCTTTTTGGTCAATTGAT+TGG | - | chr6.3:8149726-8149745 | MS.gene86038:intron | 30.0% |
| !!! | ACGATTTTGGGATTTAAATC+AGG | - | chr6.3:8149089-8149108 | MS.gene86038:intron | 30.0% |
| !!! | ACTCTGAGACTCTTAATTTT+AGG | - | chr6.3:8149508-8149527 | MS.gene86038:intron | 30.0% |
| !!! | GTATTTTTTGAGGTAAAGAG+TGG | - | chr6.3:8148874-8148893 | MS.gene86038:intron | 30.0% |
| !!! | TAGAACAGTGGTATTTTTTG+AGG | - | chr6.3:8148864-8148883 | MS.gene86038:intron | 30.0% |
| !!! | TTTTTTTCTCCGAATTGTAG+TGG | - | chr6.3:8151056-8151075 | MS.gene86038:intron | 30.0% |
| AATTTCAGCTCAAGTAAAGG+TGG | - | chr6.3:8150894-8150913 | MS.gene86038:intron | 35.0% | |
| ACCCAAAGTAAGTCAAAGAA+AGG | + | chr6.3:8148390-8148409 | None:intergenic | 35.0% | |
| ACTGGTTACAAAAAAAGGGA+TGG | + | chr6.3:8147977-8147996 | None:intergenic | 35.0% | |
| AGAGAATTATCACCCAACAT+CGG | + | chr6.3:8149369-8149388 | None:intergenic | 35.0% | |
| AGCTAATGATTGTTTCATCC+AGG | + | chr6.3:8147757-8147776 | None:intergenic | 35.0% | |
| AGTGTCCCATTTCTTAGAAA+CGG | - | chr6.3:8147569-8147588 | MS.gene86038:intron | 35.0% | |
| ATACATGCCAACAACTGAAA+GGG | + | chr6.3:8148445-8148464 | None:intergenic | 35.0% | |
| ATTTCAGCTCAAGTAAAGGT+GGG | - | chr6.3:8150895-8150914 | MS.gene86038:intron | 35.0% | |
| CAGAGTCTACTAGAATGATT+TGG | + | chr6.3:8149494-8149513 | None:intergenic | 35.0% | |
| CCAACTTGAAGAAACAAACA+TGG | + | chr6.3:8149620-8149639 | None:intergenic | 35.0% | |
| CCGAAAATGACCTATATTAC+AGG | + | chr6.3:8148095-8148114 | None:intergenic | 35.0% | |
| CTAAAACATGGACGACATAT+CGG | + | chr6.3:8150922-8150941 | None:intergenic | 35.0% | |
| GACACTAGTAATCCAAAGTT+CGG | + | chr6.3:8147555-8147574 | None:intergenic | 35.0% | |
| GATACCTAATGCAATCACAA+AGG | + | chr6.3:8150359-8150378 | None:intergenic | 35.0% | |
| GATTAATGACATCAACTGAG+AGG | - | chr6.3:8150396-8150415 | MS.gene86038:intron | 35.0% | |
| GCAAAAAGTTTCGGAAGTAA+AGG | - | chr6.3:8149959-8149978 | MS.gene86038:intron | 35.0% | |
| GCTTATGCTGGAAATTTCTT+GGG | - | chr6.3:8150631-8150650 | MS.gene86038:intron | 35.0% | |
| GGAAACCCGAGTTTAAATAA+TGG | - | chr6.3:8147492-8147511 | MS.gene86038:intron | 35.0% | |
| GGATGTGGTTAGAAAAAATG+GGG | - | chr6.3:8148895-8148914 | MS.gene86038:intron | 35.0% | |
| GTGGATGTGGTTAGAAAAAA+TGG | - | chr6.3:8148893-8148912 | MS.gene86038:intron | 35.0% | |
| GTTCTGTGATTGATGCTTAT+TGG | - | chr6.3:8147325-8147344 | MS.gene86038:CDS | 35.0% | |
| TAAAACATGGACGACATATC+GGG | + | chr6.3:8150921-8150940 | None:intergenic | 35.0% | |
| TAATAGGAGCTAGAGAGATT+TGG | + | chr6.3:8148543-8148562 | None:intergenic | 35.0% | |
| TACCTAATGCAATCACAAAG+GGG | + | chr6.3:8150357-8150376 | None:intergenic | 35.0% | |
| TACTTTGGGTAGTTGGATAA+TGG | - | chr6.3:8148400-8148419 | MS.gene86038:intron | 35.0% | |
| TATTTGACAGGGTGTAAAAC+CGG | - | chr6.3:8148303-8148322 | MS.gene86038:CDS | 35.0% | |
| TGGTCATGATTATGAGTTTC+TGG | - | chr6.3:8150563-8150582 | MS.gene86038:intron | 35.0% | |
| TTTCATGAACGATTCGTAAG+TGG | + | chr6.3:8147721-8147740 | None:intergenic | 35.0% | |
| ! | AACCTTTTGGACCTAAAACA+TGG | + | chr6.3:8150934-8150953 | None:intergenic | 35.0% |
| ! | AATAGAAACACCTAGCTCTT+CGG | + | chr6.3:8150474-8150493 | None:intergenic | 35.0% |
| ! | AGTGTCATCTACACATGTTT+TGG | - | chr6.3:8148985-8149004 | MS.gene86038:intron | 35.0% |
| ! | AGTGTGCATTTTACATGACA+AGG | - | chr6.3:8149775-8149794 | MS.gene86038:intron | 35.0% |
| ! | ATCTCTCAATTTTCGACATC+TGG | - | chr6.3:8150725-8150744 | MS.gene86038:intron | 35.0% |
| ! | CACTCAACAACTTAAGCTTT+TGG | - | chr6.3:8150796-8150815 | MS.gene86038:intron | 35.0% |
| ! | CATATCAAAACCGCTTGTTT+TGG | - | chr6.3:8147933-8147952 | MS.gene86038:intron | 35.0% |
| ! | CCATGTTTGTTTCTTCAAGT+TGG | - | chr6.3:8149617-8149636 | MS.gene86038:intron | 35.0% |
| ! | GACCTTTCTTTGACTTACTT+TGG | - | chr6.3:8148385-8148404 | MS.gene86038:intron | 35.0% |
| ! | GTGTCATCTACACATGTTTT+GGG | - | chr6.3:8148986-8149005 | MS.gene86038:intron | 35.0% |
| ! | GTGTGCATTTTACATGACAA+GGG | - | chr6.3:8149776-8149795 | MS.gene86038:intron | 35.0% |
| ! | TCTCTCAATTTTCGACATCT+GGG | - | chr6.3:8150726-8150745 | MS.gene86038:intron | 35.0% |
| ! | TGTTTTACCCCCTGTAATAT+AGG | - | chr6.3:8148082-8148101 | MS.gene86038:CDS | 35.0% |
| ! | TTTGACTTACTTTGGGTAGT+TGG | - | chr6.3:8148393-8148412 | MS.gene86038:intron | 35.0% |
| ! | TTTTGAATGACCTATTAGGG+GGG | - | chr6.3:8148236-8148255 | MS.gene86038:CDS | 35.0% |
| ! | TTTTGAATGACCTATTAGGG+GGG | + | chr6.3:8148255-8148236 | None:intergenic | 35.0% |
| !! | AAGCGGTTTTGATATGGATA+TGG | + | chr6.3:8147929-8147948 | None:intergenic | 35.0% |
| !! | AAGTATTGATGTGTAGCTTC+TGG | - | chr6.3:8148477-8148496 | MS.gene86038:CDS | 35.0% |
| !! | CAAAACAAGCGGTTTTGATA+TGG | + | chr6.3:8147935-8147954 | None:intergenic | 35.0% |
| !! | CAACATTTTAGCATGTTGTC+AGG | - | chr6.3:8149223-8149242 | MS.gene86038:intron | 35.0% |
| !! | CTTTTTGGTCAATTGATTGG+TGG | - | chr6.3:8149729-8149748 | MS.gene86038:intron | 35.0% |
| !! | TAGGAAAATCAAGGGGTATT+AGG | + | chr6.3:8149161-8149180 | None:intergenic | 35.0% |
| !!! | CACATCAATACTTTTTCGGA+AGG | + | chr6.3:8148470-8148489 | None:intergenic | 35.0% |
| !!! | GATGGCTTTATTTTTTCTGC+AGG | - | chr6.3:8150035-8150054 | MS.gene86038:intron | 35.0% |
| !!! | GCCCTTGTTTTTGTTCTTTT+TGG | - | chr6.3:8149714-8149733 | MS.gene86038:intron | 35.0% |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | - | chr6.3:8148168-8148187 | MS.gene86038:intron | 35.0% |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | + | chr6.3:8148187-8148168 | None:intergenic | 35.0% |
| AAACTTGAATCCTTCTGCAC+GGG | - | chr6.3:8150218-8150237 | MS.gene86038:intron | 40.0% | |
| AAAGTTTCGGAAGTAAAGGC+TGG | - | chr6.3:8149963-8149982 | MS.gene86038:intron | 40.0% | |
| AAATCCGGATACGTAGTATG+GGG | - | chr6.3:8147608-8147627 | MS.gene86038:intron | 40.0% | |
| AAATGACCTGTATTACAGGG+GGG | - | chr6.3:8148326-8148345 | MS.gene86038:CDS | 40.0% | |
| AACACCGGTAATCCAAAGTT+CGG | + | chr6.3:8147795-8147814 | None:intergenic | 40.0% | |
| AACATGGCATAGAGATTCCA+AGG | + | chr6.3:8149604-8149623 | None:intergenic | 40.0% | |
| AATCCAAGGAAATGAAGGGT+GGG | + | chr6.3:8149290-8149309 | None:intergenic | 40.0% | |
| AATTGATGAAGCAGAGGCTT+TGG | - | chr6.3:8149986-8150005 | MS.gene86038:intron | 40.0% | |
| ACTACGTATCCGGATTTCAT+AGG | + | chr6.3:8147605-8147624 | None:intergenic | 40.0% | |
| ATACTATACAGAGGGTTCTG+AGG | + | chr6.3:8148006-8148025 | None:intergenic | 40.0% | |
| ATCCCCTTTGTGATTGCATT+AGG | - | chr6.3:8150352-8150371 | MS.gene86038:intron | 40.0% | |
| ATGTCCGAACTTTGGATTAC+CGG | - | chr6.3:8147788-8147807 | MS.gene86038:intron | 40.0% | |
| ATTAGGACCCTTTCAGTTGT+TGG | - | chr6.3:8148435-8148454 | MS.gene86038:intron | 40.0% | |
| ATTCTATACGCGATCTGGAT+CGG | - | chr6.3:8149040-8149059 | MS.gene86038:intron | 40.0% | |
| CAAGGTCTGACACAATAGTA+AGG | + | chr6.3:8149586-8149605 | None:intergenic | 40.0% | |
| CATAACCAATTGCCGATGTT+GGG | - | chr6.3:8149354-8149373 | MS.gene86038:intron | 40.0% | |
| CATATCTCATGTCCGAACTT+TGG | - | chr6.3:8147780-8147799 | MS.gene86038:intron | 40.0% | |
| CCAAGCCCATTACATTAATC+GGG | - | chr6.3:8149017-8149036 | MS.gene86038:intron | 40.0% | |
| CCAGGTGTATTTATAGCATC+AGG | + | chr6.3:8148645-8148664 | None:intergenic | 40.0% | |
| CCCAAGCCCATTACATTAAT+CGG | - | chr6.3:8149016-8149035 | MS.gene86038:intron | 40.0% | |
| CCTGATGCTATAAATACACC+TGG | - | chr6.3:8148642-8148661 | MS.gene86038:intron | 40.0% | |
| CCTGTAATACAGGTCATTTC+CGG | + | chr6.3:8148325-8148344 | None:intergenic | 40.0% | |
| CGGAAATGACCTGTATTACA+GGG | - | chr6.3:8148323-8148342 | MS.gene86038:CDS | 40.0% | |
| CTTACTATTGTGTCAGACCT+TGG | - | chr6.3:8149584-8149603 | MS.gene86038:intron | 40.0% | |
| CTTTGTGTATAGTTGGATCG+TGG | - | chr6.3:8150983-8151002 | MS.gene86038:intron | 40.0% | |
| GAAACTTGAATCCTTCTGCA+CGG | - | chr6.3:8150217-8150236 | MS.gene86038:intron | 40.0% | |
| GAAATCCGGATACGTAGTAT+GGG | - | chr6.3:8147607-8147626 | MS.gene86038:intron | 40.0% | |
| GAAATGACCTGTATTACAGG+GGG | - | chr6.3:8148325-8148344 | MS.gene86038:CDS | 40.0% | |
| GAGGTGATGTCTTATAGTCT+TGG | - | chr6.3:8149467-8149486 | MS.gene86038:intron | 40.0% | |
| GATACATGCCAACAACTGAA+AGG | + | chr6.3:8148446-8148465 | None:intergenic | 40.0% | |
| GATTCGAAAAATGGACCTTG+AGG | - | chr6.3:8150089-8150108 | MS.gene86038:intron | 40.0% | |
| GGAAATGACCTGTATTACAG+GGG | - | chr6.3:8148324-8148343 | MS.gene86038:CDS | 40.0% | |
| GGATAGTAGGAGAACAATGT+TGG | - | chr6.3:8150445-8150464 | MS.gene86038:intron | 40.0% | |
| GGCTTATGCTGGAAATTTCT+TGG | - | chr6.3:8150630-8150649 | MS.gene86038:intron | 40.0% | |
| GGGTTAAGACCTATGAAATC+CGG | - | chr6.3:8147593-8147612 | MS.gene86038:intron | 40.0% | |
| GTGAACGAGTTAAGGATAGT+AGG | - | chr6.3:8150432-8150451 | MS.gene86038:intron | 40.0% | |
| TAGCAATGATAGCAACAACC+AGG | + | chr6.3:8151232-8151251 | None:intergenic | 40.0% | |
| TAGTAATCCAAAGTTCGGTC+AGG | + | chr6.3:8147550-8147569 | None:intergenic | 40.0% | |
| TCCCATTTCTTAGAAACGGT+GGG | - | chr6.3:8147573-8147592 | MS.gene86038:intron | 40.0% | |
| TCTACTGCATGCTCATAACA+CGG | - | chr6.3:8150523-8150542 | MS.gene86038:intron | 40.0% | |
| TGAAATCCGGATACGTAGTA+TGG | - | chr6.3:8147606-8147625 | MS.gene86038:intron | 40.0% | |
| TGAATTGTTGGAATCAGGCA+TGG | - | chr6.3:8150242-8150261 | MS.gene86038:intron | 40.0% | |
| TGGGTAAGATCCTTCAATCT+TGG | + | chr6.3:8148733-8148752 | None:intergenic | 40.0% | |
| ! | AACCCACCGTTTCTAAGAAA+TGG | + | chr6.3:8147578-8147597 | None:intergenic | 40.0% |
| ! | ACCCACCGTTTCTAAGAAAT+GGG | + | chr6.3:8147577-8147596 | None:intergenic | 40.0% |
| ! | AGAAGTACGCCCTTGATATT+TGG | + | chr6.3:8150129-8150148 | None:intergenic | 40.0% |
| ! | ATGCTTTTAAGCGGAAGCAA+AGG | - | chr6.3:8148668-8148687 | MS.gene86038:intron | 40.0% |
| ! | CGATATGTCGTCCATGTTTT+AGG | - | chr6.3:8150920-8150939 | MS.gene86038:intron | 40.0% |
| ! | GTTTCTAGAGAATGCAACAC+CGG | + | chr6.3:8147810-8147829 | None:intergenic | 40.0% |
| ! | TGCATTCTCTAGAAACCAGA+GGG | - | chr6.3:8147814-8147833 | MS.gene86038:intron | 40.0% |
| ! | TTGCATTCTCTAGAAACCAG+AGG | - | chr6.3:8147813-8147832 | MS.gene86038:intron | 40.0% |
| ! | TTTGAGGTAAAGAGTGGATG+TGG | - | chr6.3:8148880-8148899 | MS.gene86038:intron | 40.0% |
| !! | CCGATTAATGTAATGGGCTT+GGG | + | chr6.3:8149019-8149038 | None:intergenic | 40.0% |
| !! | GTCCATGTTTTAGGTCCAAA+AGG | - | chr6.3:8150929-8150948 | MS.gene86038:intron | 40.0% |
| !! | TGATTGGTGGAAGCATTGTA+AGG | - | chr6.3:8149742-8149761 | MS.gene86038:intron | 40.0% |
| !!! | TCAAAACCGCTTGTTTTGGT+TGG | - | chr6.3:8147937-8147956 | MS.gene86038:CDS | 40.0% |
| !!! | TTTTTTGGGTCTTAACCCTC+TGG | + | chr6.3:8147832-8147851 | None:intergenic | 40.0% |
| AACAATTCATCCCGTGCAGA+AGG | + | chr6.3:8150231-8150250 | None:intergenic | 45.0% | |
| ACTGAGAGGTTGAACAAGAC+TGG | - | chr6.3:8150410-8150429 | MS.gene86038:intron | 45.0% | |
| ACTGCAGCTACAGCTCTTAA+TGG | - | chr6.3:8147270-8147289 | MS.gene86038:CDS | 45.0% | |
| ACTTTCTCCTGACCGAACTT+TGG | - | chr6.3:8147540-8147559 | MS.gene86038:intron | 45.0% | |
| AGGCATGGCAGATACTATGA+CGG | - | chr6.3:8150257-8150276 | MS.gene86038:intron | 45.0% | |
| AGTCATTAACCACTTGAGCC+CGG | + | chr6.3:8147697-8147716 | None:intergenic | 45.0% | |
| ATGTTGGAAACCGAAGAGCT+AGG | - | chr6.3:8150461-8150480 | MS.gene86038:intron | 45.0% | |
| CAAGAAACTTGGAGGGTTTC+AGG | + | chr6.3:8149263-8149282 | None:intergenic | 45.0% | |
| CAAGACTGGTGAACGAGTTA+AGG | - | chr6.3:8150424-8150443 | MS.gene86038:intron | 45.0% | |
| CAATCCAAGGAAATGAAGGG+TGG | + | chr6.3:8149291-8149310 | None:intergenic | 45.0% | |
| CATGGCGTGGATGATAACAT+AGG | - | chr6.3:8151128-8151147 | MS.gene86038:intron | 45.0% | |
| CCAACATCGGCAATTGGTTA+TGG | + | chr6.3:8149356-8149375 | None:intergenic | 45.0% | |
| CCATAACCAATTGCCGATGT+TGG | - | chr6.3:8149353-8149372 | MS.gene86038:intron | 45.0% | |
| CCGGAAATGACCTGTATTAC+AGG | - | chr6.3:8148322-8148341 | MS.gene86038:CDS | 45.0% | |
| CGGGATGAATTGTTGGAATC+AGG | - | chr6.3:8150237-8150256 | MS.gene86038:intron | 45.0% | |
| CGTACTTCTTGCTAAGTTGC+GGG | - | chr6.3:8150140-8150159 | MS.gene86038:intron | 45.0% | |
| CTGAAACCCTCCAAGTTTCT+TGG | - | chr6.3:8149261-8149280 | MS.gene86038:intron | 45.0% | |
| GAGATCGCAACCAAGATTGA+AGG | - | chr6.3:8148720-8148739 | MS.gene86038:intron | 45.0% | |
| GCGTACTTCTTGCTAAGTTG+CGG | - | chr6.3:8150139-8150158 | MS.gene86038:intron | 45.0% | |
| GCTGTAAACTTCTTGCCTCA+AGG | + | chr6.3:8150107-8150126 | None:intergenic | 45.0% | |
| GGGAAACCAAGAAACTTGGA+GGG | + | chr6.3:8149270-8149289 | None:intergenic | 45.0% | |
| GTCCCATTTCTTAGAAACGG+TGG | - | chr6.3:8147572-8147591 | MS.gene86038:intron | 45.0% | |
| GTCGCTGTGAATGCAAATCT+TGG | + | chr6.3:8150499-8150518 | None:intergenic | 45.0% | |
| TATCACCCAACATCGGCAAT+TGG | + | chr6.3:8149362-8149381 | None:intergenic | 45.0% | |
| TATGCTCACTTGCAGCTTCA+TGG | - | chr6.3:8151110-8151129 | MS.gene86038:intron | 45.0% | |
| TGGGAAACCAAGAAACTTGG+AGG | + | chr6.3:8149271-8149290 | None:intergenic | 45.0% | |
| TTCTGCACGGGATGAATTGT+TGG | - | chr6.3:8150230-8150249 | MS.gene86038:intron | 45.0% | |
| TTTCCCACCCTTCATTTCCT+TGG | - | chr6.3:8149284-8149303 | MS.gene86038:intron | 45.0% | |
| ! | ACCTGGCGAATGCTTTTAAG+CGG | - | chr6.3:8148659-8148678 | MS.gene86038:intron | 45.0% |
| ! | ATTGGGTGGGGAATGGTTTT+TGG | + | chr6.3:8149684-8149703 | None:intergenic | 45.0% |
| ! | TTGGGTGGGGAATGGTTTTT+GGG | + | chr6.3:8149683-8149702 | None:intergenic | 45.0% |
| !! | ACAAGGGCATCAACCATGAT+TGG | + | chr6.3:8149702-8149721 | None:intergenic | 45.0% |
| !! | CAAGGGCATCAACCATGATT+GGG | + | chr6.3:8149701-8149720 | None:intergenic | 45.0% |
| !! | CCCGATTAATGTAATGGGCT+TGG | + | chr6.3:8149020-8149039 | None:intergenic | 45.0% |
| AACCATGATTGGGTGGGGAA+TGG | + | chr6.3:8149691-8149710 | None:intergenic | 50.0% | |
| AACCATTCCCCACCCAATCA+TGG | - | chr6.3:8149686-8149705 | MS.gene86038:intron | 50.0% | |
| AAGCGGAAGCAAAGGTTGTC+AGG | - | chr6.3:8148676-8148695 | MS.gene86038:intron | 50.0% | |
| ACGTCCCCATACTACGTATC+CGG | + | chr6.3:8147615-8147634 | None:intergenic | 50.0% | |
| AGCGGAAGCAAAGGTTGTCA+GGG | - | chr6.3:8148677-8148696 | MS.gene86038:intron | 50.0% | |
| AGGGTTCATAGGGTTGCTCA+TGG | - | chr6.3:8147875-8147894 | MS.gene86038:intron | 50.0% | |
| GCAGCTACAGCTCTTAATGG+AGG | - | chr6.3:8147273-8147292 | MS.gene86038:CDS | 50.0% | |
| GCATCAACCATGATTGGGTG+GGG | + | chr6.3:8149696-8149715 | None:intergenic | 50.0% | |
| GCTTTACCCCCCTGTAATAC+AGG | + | chr6.3:8148335-8148354 | None:intergenic | 50.0% | |
| GGCATCAACCATGATTGGGT+GGG | + | chr6.3:8149697-8149716 | None:intergenic | 50.0% | |
| GGCTGGAATTGATGAAGCAG+AGG | - | chr6.3:8149980-8149999 | MS.gene86038:intron | 50.0% | |
| GGGTGGGAAACCAAGAAACT+TGG | + | chr6.3:8149274-8149293 | None:intergenic | 50.0% | |
| GTTGAGTGAAGCCACGAGAA+TGG | + | chr6.3:8150784-8150803 | None:intergenic | 50.0% | |
| TCGGGATTCTATACGCGATC+TGG | - | chr6.3:8149035-8149054 | MS.gene86038:intron | 50.0% | |
| ! | TGGGTGGGGAATGGTTTTTG+GGG | + | chr6.3:8149682-8149701 | None:intergenic | 50.0% |
| !! | AATGGTTTTTGGGGGGAAGG+GGG | + | chr6.3:8149673-8149692 | None:intergenic | 50.0% |
| !! | AGGGTTCTGAGGTGAACAAC+TGG | + | chr6.3:8147995-8148014 | None:intergenic | 50.0% |
| !! | ATCAAGGGGTATTAGGCCAG+AGG | + | chr6.3:8149154-8149173 | None:intergenic | 50.0% |
| !! | ATGTAATGGGCTTGGGCGTT+TGG | + | chr6.3:8149012-8149031 | None:intergenic | 50.0% |
| !! | GAATGGTTTTTGGGGGGAAG+GGG | + | chr6.3:8149674-8149693 | None:intergenic | 50.0% |
| !! | GGAATGGTTTTTGGGGGGAA+GGG | + | chr6.3:8149675-8149694 | None:intergenic | 50.0% |
| !! | TCCGCTTAAAAGCATTCGCC+AGG | + | chr6.3:8148663-8148682 | None:intergenic | 50.0% |
| AACCACTTGAGCCCGGTCAA+TGG | + | chr6.3:8147690-8147709 | None:intergenic | 55.0% | |
| AACCATTGACCGGGCTCAAG+TGG | - | chr6.3:8147685-8147704 | MS.gene86038:intron | 55.0% | |
| GCGGAAGCAAAGGTTGTCAG+GGG | - | chr6.3:8148678-8148697 | MS.gene86038:intron | 55.0% | |
| GGGCATCAACCATGATTGGG+TGG | + | chr6.3:8149698-8149717 | None:intergenic | 55.0% | |
| TCACTTGCAGCTTCATGGCG+TGG | - | chr6.3:8151115-8151134 | MS.gene86038:intron | 55.0% | |
| !! | GGGAATGGTTTTTGGGGGGA+AGG | + | chr6.3:8149676-8149695 | None:intergenic | 55.0% |
| !! | GGGTGGGGAATGGTTTTTGG+GGG | + | chr6.3:8149681-8149700 | None:intergenic | 55.0% |
| !! | GGTGGGGAATGGTTTTTGGG+GGG | + | chr6.3:8149680-8149699 | None:intergenic | 55.0% |
| TGGCTGCATTGTGCTCGTCC+TGG | - | chr6.3:8151211-8151230 | MS.gene86038:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 8147201 | 8151277 | 8147201 | ID=MS.gene86038 |
| chr6.3 | mRNA | 8147201 | 8151277 | 8147201 | ID=MS.gene86038.t1;Parent=MS.gene86038 |
| chr6.3 | exon | 8151184 | 8151277 | 8151184 | ID=MS.gene86038.t1.exon1;Parent=MS.gene86038.t1 |
| chr6.3 | CDS | 8151184 | 8151277 | 8151184 | ID=cds.MS.gene86038.t1;Parent=MS.gene86038.t1 |
| chr6.3 | exon | 8148471 | 8148529 | 8148471 | ID=MS.gene86038.t1.exon2;Parent=MS.gene86038.t1 |
| chr6.3 | CDS | 8148471 | 8148529 | 8148471 | ID=cds.MS.gene86038.t1;Parent=MS.gene86038.t1 |
| chr6.3 | exon | 8148200 | 8148388 | 8148200 | ID=MS.gene86038.t1.exon3;Parent=MS.gene86038.t1 |
| chr6.3 | CDS | 8148200 | 8148388 | 8148200 | ID=cds.MS.gene86038.t1;Parent=MS.gene86038.t1 |
| chr6.3 | exon | 8147934 | 8148104 | 8147934 | ID=MS.gene86038.t1.exon4;Parent=MS.gene86038.t1 |
| chr6.3 | CDS | 8147934 | 8148104 | 8147934 | ID=cds.MS.gene86038.t1;Parent=MS.gene86038.t1 |
| chr6.3 | exon | 8147201 | 8147353 | 8147201 | ID=MS.gene86038.t1.exon5;Parent=MS.gene86038.t1 |
| chr6.3 | CDS | 8147201 | 8147353 | 8147201 | ID=cds.MS.gene86038.t1;Parent=MS.gene86038.t1 |
| Gene Sequence |
| Protein sequence |
