Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001118.01.T01 | XP_003589619.1 | 94.314 | 299 | 17 | 0 | 18 | 316 | 18 | 316 | 0 | 592 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001118.01.T01 | Q9M2E2 | 39.465 | 299 | 146 | 8 | 42 | 316 | 9 | 296 | 1.19E-58 | 193 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001118.01.T01 | G7I950 | 94.314 | 299 | 17 | 0 | 18 | 316 | 18 | 316 | 0.0 | 592 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047791.01 | MsG0180001118.01 | 0.826285 | 2.950766e-54 | 2.755265e-51 |
MsG0080048152.01 | MsG0180001118.01 | 0.817444 | 3.288162e-52 | 2.395051e-49 |
MsG0080048817.01 | MsG0180001118.01 | 0.805577 | 1.248305e-49 | 6.627722e-47 |
MsG0080048878.01 | MsG0180001118.01 | 0.808911 | 2.454654e-50 | 1.420966e-47 |
MsG0080049011.01 | MsG0180001118.01 | 0.832803 | 7.673651e-56 | 8.670422e-53 |
MsG0180000038.01 | MsG0180001118.01 | 0.819457 | 1.150066e-52 | 8.855116e-50 |
MsG0180000205.01 | MsG0180001118.01 | 0.817904 | 2.588162e-52 | 1.909022e-49 |
MsG0180000355.01 | MsG0180001118.01 | 0.828574 | 8.337532e-55 | 8.320001e-52 |
MsG0180000384.01 | MsG0180001118.01 | 0.806864 | 6.686872e-50 | 3.669467e-47 |
MsG0180000568.01 | MsG0180001118.01 | 0.806790 | 6.933025e-50 | 3.797128e-47 |
MsG0180000790.01 | MsG0180001118.01 | 0.806466 | 8.115712e-50 | 4.408206e-47 |
MsG0180000982.01 | MsG0180001118.01 | 0.802760 | 4.813636e-49 | 2.377482e-46 |
MsG0180001118.01 | MsG0180001886.01 | 0.803249 | 3.814052e-49 | 1.907365e-46 |
MsG0180001118.01 | MsG0180002547.01 | 0.800998 | 1.107646e-48 | 5.231805e-46 |
MsG0180001118.01 | MsG0180003697.01 | 0.809506 | 1.829712e-50 | 1.076214e-47 |
MsG0180001118.01 | MsG0180003793.01 | 0.804917 | 1.716152e-49 | 8.959322e-47 |
MsG0180001118.01 | MsG0180003821.01 | 0.815484 | 9.027668e-52 | 6.232496e-49 |
MsG0180001118.01 | MsG0180004398.01 | 0.805188 | 1.506291e-49 | 7.917930e-47 |
MsG0180001118.01 | MsG0180004481.01 | 0.814808 | 1.275826e-51 | 8.646662e-49 |
MsG0180001118.01 | MsG0180004482.01 | 0.807024 | 6.185860e-50 | 3.408546e-47 |
MsG0180001118.01 | MsG0180004493.01 | 0.812196 | 4.788789e-51 | 3.025067e-48 |
MsG0180001118.01 | MsG0180004605.01 | -0.807136 | 5.856234e-50 | 3.236243e-47 |
MsG0180001118.01 | MsG0180004861.01 | 0.813793 | 2.138471e-51 | 1.409996e-48 |
MsG0180001118.01 | MsG0180005334.01 | 0.818187 | 2.233824e-52 | 1.660582e-49 |
MsG0180001118.01 | MsG0180005913.01 | 0.809180 | 2.148930e-50 | 1.253080e-47 |
MsG0180001118.01 | MsG0180006096.01 | 0.813030 | 3.145461e-51 | 2.031478e-48 |
MsG0180001118.01 | MsG0180006144.01 | 0.832986 | 6.912155e-56 | 7.853713e-53 |
MsG0180001118.01 | MsG0280006593.01 | 0.814263 | 1.684487e-51 | 1.124906e-48 |
MsG0180001118.01 | MsG0280007193.01 | -0.818718 | 1.693857e-52 | 1.277725e-49 |
MsG0180001118.01 | MsG0280007847.01 | 0.832276 | 1.036772e-55 | 1.153127e-52 |
MsG0180001118.01 | MsG0280008429.01 | 0.845839 | 3.160501e-59 | 5.336322e-56 |
MsG0180001118.01 | MsG0280009685.01 | 0.805000 | 1.649025e-49 | 8.626535e-47 |
MsG0180001118.01 | MsG0280010013.01 | 0.825477 | 4.589745e-54 | 4.187881e-51 |
MsG0180001118.01 | MsG0280010595.01 | 0.821538 | 3.829059e-53 | 3.123814e-50 |
MsG0180001118.01 | MsG0280010776.01 | 0.824715 | 6.947147e-54 | 6.203590e-51 |
MsG0180001118.01 | MsG0280011304.01 | 0.814063 | 1.864107e-51 | 1.238172e-48 |
MsG0180001118.01 | MsG0280011339.01 | 0.806567 | 7.724473e-50 | 4.206526e-47 |
MsG0180001118.01 | MsG0280011388.01 | 0.804645 | 1.956036e-49 | 1.013927e-46 |
MsG0180001118.01 | MsG0380011516.01 | 0.812202 | 4.773662e-51 | 3.015985e-48 |
MsG0180001118.01 | MsG0380011747.01 | 0.808843 | 2.537564e-50 | 1.466335e-47 |
MsG0180001118.01 | MsG0380012570.01 | 0.824116 | 9.608138e-54 | 8.432591e-51 |
MsG0180001118.01 | MsG0380013085.01 | 0.813279 | 2.774138e-51 | 1.803782e-48 |
MsG0180001118.01 | MsG0380014175.01 | 0.810378 | 1.187820e-50 | 7.148412e-48 |
MsG0180001118.01 | MsG0380015027.01 | 0.854102 | 1.539111e-61 | 3.400089e-58 |
MsG0180001118.01 | MsG0380015435.01 | 0.811500 | 6.785794e-51 | 4.207549e-48 |
MsG0180001118.01 | MsG0380015466.01 | 0.809862 | 1.534273e-50 | 9.109804e-48 |
MsG0180001118.01 | MsG0380016505.01 | 0.828220 | 1.014951e-54 | 1.002433e-51 |
MsG0180001118.01 | MsG0380016559.01 | 0.819666 | 1.030274e-52 | 7.978829e-50 |
MsG0180001118.01 | MsG0380016560.01 | 0.841794 | 3.828869e-58 | 5.688434e-55 |
MsG0180001118.01 | MsG0380016671.01 | 0.819890 | 9.156416e-53 | 7.135886e-50 |
MsG0180001118.01 | MsG0380017947.01 | 0.805038 | 1.619098e-49 | 8.478206e-47 |
MsG0180001118.01 | MsG0380018033.01 | 0.815419 | 9.333237e-52 | 6.431495e-49 |
MsG0180001118.01 | MsG0380018044.01 | 0.801610 | 8.300107e-49 | 3.980988e-46 |
MsG0180001118.01 | MsG0480018911.01 | 0.800768 | 1.234224e-48 | 5.795023e-46 |
MsG0180001118.01 | MsG0480021037.01 | 0.803760 | 2.988330e-49 | 1.514226e-46 |
MsG0180001118.01 | MsG0480021280.01 | 0.812210 | 4.754564e-51 | 3.004605e-48 |
MsG0180001118.01 | MsG0480021776.01 | -0.810944 | 8.961036e-51 | 5.475519e-48 |
MsG0180001118.01 | MsG0480022035.01 | 0.803709 | 3.063014e-49 | 1.549923e-46 |
MsG0180001118.01 | MsG0480022223.01 | 0.823844 | 1.112908e-53 | 9.693609e-51 |
MsG0180001118.01 | MsG0480022672.01 | 0.814708 | 1.342265e-51 | 9.072412e-49 |
MsG0180001118.01 | MsG0480022780.01 | 0.804808 | 1.807964e-49 | 9.412139e-47 |
MsG0180001118.01 | MsG0480023009.01 | 0.804879 | 1.747644e-49 | 9.115041e-47 |
MsG0180001118.01 | MsG0480023660.01 | 0.806989 | 6.293060e-50 | 3.464389e-47 |
MsG0180001118.01 | MsG0580024084.01 | 0.817872 | 2.631629e-52 | 1.939455e-49 |
MsG0180001118.01 | MsG0580024619.01 | 0.805714 | 1.168211e-49 | 6.224803e-47 |
MsG0180001118.01 | MsG0580025268.01 | 0.812177 | 4.834362e-51 | 3.052214e-48 |
MsG0180001118.01 | MsG0580025756.01 | 0.826881 | 2.127043e-54 | 2.020270e-51 |
MsG0180001118.01 | MsG0580026137.01 | 0.808063 | 3.723638e-50 | 2.108135e-47 |
MsG0180001118.01 | MsG0580026206.01 | 0.812085 | 5.062259e-51 | 3.188128e-48 |
MsG0180001118.01 | MsG0580026301.01 | 0.818254 | 2.157456e-52 | 1.606682e-49 |
MsG0180001118.01 | MsG0580026439.01 | 0.821043 | 4.980231e-53 | 4.007872e-50 |
MsG0180001118.01 | MsG0580026485.01 | 0.840484 | 8.456527e-58 | 1.206279e-54 |
MsG0180001118.01 | MsG0580026718.01 | 0.811438 | 7.001694e-51 | 4.334200e-48 |
MsG0180001118.01 | MsG0580027361.01 | 0.808525 | 2.966938e-50 | 1.700342e-47 |
MsG0180001118.01 | MsG0580028582.01 | 0.819924 | 8.994706e-53 | 7.016529e-50 |
MsG0180001118.01 | MsG0580029717.01 | 0.803555 | 3.296204e-49 | 1.661532e-46 |
MsG0180001118.01 | MsG0580029879.01 | 0.801670 | 8.071259e-49 | 3.877137e-46 |
MsG0180001118.01 | MsG0580029924.01 | 0.811483 | 6.846003e-51 | 4.242819e-48 |
MsG0180001118.01 | MsG0580029925.01 | 0.821621 | 3.662581e-53 | 2.994975e-50 |
MsG0180001118.01 | MsG0680030320.01 | 0.801567 | 8.471150e-49 | 4.058659e-46 |
MsG0180001118.01 | MsG0680030350.01 | 0.801789 | 7.627560e-49 | 3.675141e-46 |
MsG0180001118.01 | MsG0680030555.01 | 0.804161 | 2.467457e-49 | 1.263190e-46 |
MsG0180001118.01 | MsG0680031468.01 | 0.805994 | 1.020013e-49 | 5.474317e-47 |
MsG0180001118.01 | MsG0680035765.01 | 0.827061 | 1.926471e-54 | 1.839426e-51 |
MsG0180001118.01 | MsG0680035877.01 | 0.809800 | 1.581902e-50 | 9.377754e-48 |
MsG0180001118.01 | MsG0680035888.01 | 0.810512 | 1.111202e-50 | 6.711140e-48 |
MsG0180001118.01 | MsG0780036659.01 | 0.801811 | 7.550504e-49 | 3.640075e-46 |
MsG0180001118.01 | MsG0780037093.01 | 0.816163 | 6.371452e-52 | 4.480881e-49 |
MsG0180001118.01 | MsG0780038400.01 | 0.825763 | 3.924618e-54 | 3.610663e-51 |
MsG0180001118.01 | MsG0780039369.01 | 0.812014 | 5.245068e-51 | 3.296838e-48 |
MsG0180001118.01 | MsG0780039423.01 | 0.804300 | 2.307516e-49 | 1.185557e-46 |
MsG0180001118.01 | MsG0780040545.01 | 0.822537 | 2.247156e-53 | 1.886274e-50 |
MsG0180001118.01 | MsG0780041016.01 | 0.804225 | 2.392887e-49 | 1.226977e-46 |
MsG0180001118.01 | MsG0780041137.01 | 0.818844 | 1.585895e-52 | 1.200537e-49 |
MsG0180001118.01 | MsG0780041223.01 | 0.814237 | 1.706208e-51 | 1.138653e-48 |
MsG0180001118.01 | MsG0780041268.01 | 0.830279 | 3.211721e-55 | 3.368149e-52 |
MsG0180001118.01 | MsG0780041440.01 | 0.808419 | 3.126154e-50 | 1.786597e-47 |
MsG0180001118.01 | MsG0880042128.01 | 0.800085 | 1.700335e-48 | 7.846700e-46 |
MsG0180001118.01 | MsG0880042134.01 | 0.810707 | 1.008212e-50 | 6.121353e-48 |
MsG0180001118.01 | MsG0880042519.01 | 0.817326 | 3.495098e-52 | 2.537448e-49 |
MsG0180001118.01 | MsG0880043749.01 | 0.816180 | 6.317115e-52 | 4.444699e-49 |
MsG0180001118.01 | MsG0880044005.01 | 0.805140 | 1.541412e-49 | 8.092798e-47 |
MsG0180001118.01 | MsG0880044728.01 | 0.812206 | 4.764608e-51 | 3.010548e-48 |
MsG0180001118.01 | MsG0880044975.01 | 0.832325 | 1.008190e-55 | 1.122971e-52 |
MsG0180001118.01 | MsG0880045017.01 | 0.810637 | 1.044172e-50 | 6.327499e-48 |
MsG0180001118.01 | MsG0880045613.01 | 0.805021 | 1.632110e-49 | 8.542686e-47 |
MsG0180001118.01 | MsG0880045684.01 | 0.818691 | 1.717435e-52 | 1.294541e-49 |
MsG0180001118.01 | MsG0880045965.01 | 0.800819 | 1.204852e-48 | 5.664559e-46 |
MsG0180001118.01 | MsG0880046517.01 | 0.806113 | 9.628992e-50 | 5.183265e-47 |
MsG0180001118.01 | MsG0880047052.01 | 0.807946 | 3.943054e-50 | 2.225457e-47 |
MsG0180001118.01 | MsG0880047212.01 | 0.855406 | 6.446201e-62 | 1.486767e-58 |
MsG0180001118.01 | MsG0880047427.01 | 0.820157 | 7.954432e-53 | 6.245443e-50 |
MsG0180001118.01 | MsG0880047703.01 | 0.802114 | 6.542142e-49 | 3.178229e-46 |
MsG0180001118.01 | MsG0880047763.01 | 0.808634 | 2.812977e-50 | 1.616554e-47 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0180001118.01 | MsG0880045006.01 | PPI |
MsG0880045006.01 | MsG0180001118.01 | PPI |
MsG0180001118.01 | MsG0480022299.01 | PPI |
MsG0180001118.01 | MsG0880043253.01 | PPI |
MsG0180001118.01 | MsG0880043251.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001118.01.T01 | MTR_1g031180 | 94.314 | 299 | 17 | 0 | 18 | 316 | 18 | 316 | 0.0 | 592 |
MsG0180001118.01.T01 | MTR_3g098470 | 76.948 | 308 | 71 | 0 | 9 | 316 | 4 | 311 | 0.0 | 510 |
MsG0180001118.01.T01 | MTR_8g096060 | 73.667 | 300 | 76 | 1 | 17 | 316 | 14 | 310 | 3.69e-168 | 469 |
MsG0180001118.01.T01 | MTR_4g087460 | 42.034 | 295 | 153 | 8 | 34 | 316 | 16 | 304 | 4.19e-71 | 223 |
MsG0180001118.01.T01 | MTR_7g076660 | 40.484 | 289 | 147 | 6 | 42 | 316 | 9 | 286 | 4.28e-63 | 201 |
MsG0180001118.01.T01 | MTR_7g076660 | 40.484 | 289 | 147 | 6 | 42 | 316 | 10 | 287 | 6.72e-63 | 201 |
MsG0180001118.01.T01 | MTR_8g031610 | 40.667 | 300 | 141 | 8 | 42 | 316 | 7 | 294 | 1.05e-62 | 201 |
MsG0180001118.01.T01 | MTR_8g031630 | 40.532 | 301 | 141 | 9 | 42 | 316 | 9 | 297 | 1.27e-62 | 201 |
MsG0180001118.01.T01 | MTR_7g076655 | 40.484 | 289 | 147 | 6 | 42 | 316 | 9 | 286 | 1.54e-61 | 197 |
MsG0180001118.01.T01 | MTR_8g032000 | 38.305 | 295 | 145 | 5 | 42 | 310 | 9 | 292 | 8.84e-61 | 196 |
MsG0180001118.01.T01 | MTR_8g031650 | 40.333 | 300 | 141 | 9 | 43 | 316 | 104 | 391 | 9.24e-61 | 199 |
MsG0180001118.01.T01 | MTR_8g031650 | 35.537 | 121 | 67 | 4 | 182 | 297 | 2 | 116 | 2.90e-13 | 70.1 |
MsG0180001118.01.T01 | MTR_5g062280 | 39.935 | 308 | 141 | 8 | 37 | 316 | 4 | 295 | 1.10e-60 | 196 |
MsG0180001118.01.T01 | MTR_8g031960 | 39.333 | 300 | 144 | 6 | 41 | 314 | 9 | 296 | 3.06e-60 | 194 |
MsG0180001118.01.T01 | MTR_8g031600 | 40.264 | 303 | 144 | 7 | 40 | 316 | 7 | 298 | 3.47e-60 | 194 |
MsG0180001118.01.T01 | MTR_8g032010 | 38.047 | 297 | 147 | 5 | 38 | 308 | 5 | 290 | 4.95e-60 | 194 |
MsG0180001118.01.T01 | MTR_8g031980 | 38.284 | 303 | 149 | 6 | 39 | 315 | 6 | 296 | 6.69e-60 | 194 |
MsG0180001118.01.T01 | MTR_8g031650 | 40.333 | 300 | 141 | 9 | 43 | 316 | 270 | 557 | 3.13e-59 | 199 |
MsG0180001118.01.T01 | MTR_8g031650 | 40.000 | 285 | 131 | 9 | 42 | 297 | 9 | 282 | 2.92e-56 | 191 |
MsG0180001118.01.T01 | MTR_8g031910 | 42.123 | 292 | 139 | 8 | 37 | 311 | 4 | 282 | 1.21e-58 | 190 |
MsG0180001118.01.T01 | MTR_8g031990 | 36.066 | 305 | 158 | 5 | 38 | 316 | 5 | 298 | 4.59e-58 | 189 |
MsG0180001118.01.T01 | MTR_8g031900 | 36.149 | 296 | 157 | 5 | 42 | 316 | 9 | 293 | 4.33e-57 | 186 |
MsG0180001118.01.T01 | MTR_8g032020 | 37.086 | 302 | 152 | 6 | 42 | 316 | 10 | 300 | 1.08e-56 | 186 |
MsG0180001118.01.T01 | MTR_3g079320 | 37.500 | 296 | 146 | 5 | 42 | 308 | 13 | 298 | 6.48e-56 | 184 |
MsG0180001118.01.T01 | MTR_8g031940 | 39.116 | 294 | 141 | 8 | 42 | 308 | 9 | 291 | 9.57e-55 | 180 |
MsG0180001118.01.T01 | MTR_7g076665 | 37.248 | 298 | 153 | 6 | 42 | 316 | 9 | 295 | 2.85e-54 | 179 |
MsG0180001118.01.T01 | MTR_7g076660 | 38.971 | 272 | 141 | 6 | 59 | 316 | 2 | 262 | 3.69e-54 | 177 |
MsG0180001118.01.T01 | MTR_7g106800 | 37.589 | 282 | 127 | 7 | 42 | 316 | 11 | 250 | 1.01e-46 | 159 |
MsG0180001118.01.T01 | MTR_8g031850 | 32.734 | 278 | 153 | 4 | 42 | 316 | 9 | 255 | 3.19e-44 | 152 |
MsG0180001118.01.T01 | MTR_5g083430 | 38.265 | 196 | 109 | 4 | 121 | 316 | 1 | 184 | 9.40e-35 | 125 |
MsG0180001118.01.T01 | MTR_8g032030 | 40.828 | 169 | 72 | 5 | 39 | 180 | 6 | 173 | 1.97e-31 | 118 |
MsG0180001118.01.T01 | MTR_3g068070 | 34.722 | 144 | 91 | 3 | 34 | 175 | 12 | 154 | 1.98e-12 | 66.6 |
MsG0180001118.01.T01 | MTR_4g105310 | 24.567 | 289 | 170 | 10 | 42 | 313 | 51 | 308 | 1.94e-11 | 64.3 |
MsG0180001118.01.T01 | MTR_4g105310 | 25.316 | 237 | 144 | 7 | 42 | 276 | 51 | 256 | 4.73e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001118.01.T01 | AT5G51030 | 65.806 | 310 | 106 | 0 | 7 | 316 | 5 | 314 | 4.51e-164 | 459 |
MsG0180001118.01.T01 | AT5G61830 | 68.690 | 313 | 95 | 2 | 7 | 316 | 4 | 316 | 1.46e-162 | 456 |
MsG0180001118.01.T01 | AT5G61830 | 68.690 | 313 | 95 | 2 | 7 | 316 | 4 | 316 | 1.46e-162 | 456 |
MsG0180001118.01.T01 | AT3G59710 | 46.290 | 283 | 141 | 5 | 28 | 308 | 7 | 280 | 5.94e-79 | 242 |
MsG0180001118.01.T01 | AT3G59710 | 46.429 | 280 | 139 | 5 | 31 | 308 | 39 | 309 | 1.40e-77 | 240 |
MsG0180001118.01.T01 | AT3G59710 | 45.745 | 282 | 142 | 5 | 29 | 308 | 18 | 290 | 2.43e-76 | 236 |
MsG0180001118.01.T01 | AT3G61220 | 39.465 | 299 | 146 | 8 | 42 | 316 | 9 | 296 | 1.21e-59 | 193 |
MsG0180001118.01.T01 | AT3G61220 | 39.465 | 299 | 146 | 8 | 42 | 316 | 16 | 303 | 2.17e-59 | 192 |
MsG0180001118.01.T01 | AT3G61220 | 39.465 | 299 | 146 | 8 | 42 | 316 | 40 | 327 | 4.34e-59 | 192 |
MsG0180001118.01.T01 | AT2G24190 | 38.255 | 298 | 148 | 8 | 42 | 315 | 9 | 294 | 4.68e-57 | 186 |
MsG0180001118.01.T01 | AT2G24190 | 38.255 | 298 | 148 | 8 | 42 | 315 | 14 | 299 | 5.33e-57 | 186 |
MsG0180001118.01.T01 | AT1G01800 | 35.880 | 301 | 157 | 7 | 41 | 316 | 6 | 295 | 3.22e-54 | 179 |
MsG0180001118.01.T01 | AT1G01800 | 33.880 | 183 | 110 | 3 | 134 | 316 | 89 | 260 | 2.73e-26 | 105 |
MsG0180001118.01.T01 | AT5G50130 | 25.566 | 309 | 171 | 13 | 30 | 315 | 27 | 299 | 1.11e-13 | 71.2 |
MsG0180001118.01.T01 | AT5G50130 | 30.000 | 220 | 128 | 9 | 30 | 226 | 27 | 243 | 3.41e-13 | 68.9 |
MsG0180001118.01.T01 | AT5G50130 | 29.646 | 226 | 122 | 10 | 30 | 226 | 27 | 244 | 3.72e-13 | 68.9 |
MsG0180001118.01.T01 | AT5G50130 | 34.416 | 154 | 90 | 7 | 30 | 175 | 27 | 177 | 1.04e-12 | 68.2 |
MsG0180001118.01.T01 | AT5G50130 | 34.416 | 154 | 90 | 7 | 30 | 175 | 27 | 177 | 1.09e-12 | 68.2 |
MsG0180001118.01.T01 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 16 | 159 | 4.51e-12 | 65.9 |
MsG0180001118.01.T01 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 20 | 163 | 5.19e-12 | 65.9 |
MsG0180001118.01.T01 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 23 | 166 | 5.48e-12 | 65.9 |
MsG0180001118.01.T01 | AT1G63380 | 31.944 | 144 | 92 | 3 | 38 | 175 | 18 | 161 | 5.50e-12 | 65.5 |
MsG0180001118.01.T01 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 15 | 158 | 7.05e-12 | 65.1 |
MsG0180001118.01.T01 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 16 | 159 | 7.11e-12 | 65.1 |
MsG0180001118.01.T01 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 20 | 163 | 7.44e-12 | 65.1 |
MsG0180001118.01.T01 | AT1G62610 | 31.944 | 144 | 92 | 3 | 38 | 175 | 14 | 157 | 7.75e-12 | 65.1 |
MsG0180001118.01.T01 | AT5G50130 | 26.102 | 295 | 159 | 13 | 44 | 315 | 8 | 266 | 8.33e-12 | 65.5 |
MsG0180001118.01.T01 | AT3G46170 | 31.293 | 147 | 95 | 3 | 38 | 178 | 27 | 173 | 1.97e-11 | 63.9 |
MsG0180001118.01.T01 | AT3G55290 | 31.293 | 147 | 95 | 3 | 38 | 178 | 19 | 165 | 4.10e-11 | 63.2 |
MsG0180001118.01.T01 | AT3G55290 | 31.293 | 147 | 95 | 3 | 38 | 178 | 18 | 164 | 4.18e-11 | 63.2 |
MsG0180001118.01.T01 | AT3G55310 | 31.293 | 147 | 95 | 3 | 38 | 178 | 18 | 164 | 6.15e-11 | 62.4 |
MsG0180001118.01.T01 | AT4G24050 | 29.388 | 245 | 128 | 11 | 42 | 277 | 37 | 245 | 8.18e-11 | 62.0 |
Find 95 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAACGGATGGTTTCATTAA+TGG | 0.171749 | 1:-16260230 | None:intergenic |
TTATGGTGGTTTAGATATTC+TGG | 0.207457 | 1:+16259375 | MsG0180001118.01.T01:CDS |
TCCGACCACCATTGATAATA+AGG | 0.229858 | 1:+16261454 | MsG0180001118.01.T01:three_prime_UTR |
GTTGCTTCACTGCATATAAA+TGG | 0.234055 | 1:+16258751 | MsG0180001118.01.T01:exon |
ATGCTGGTGCTGAATCAATT+AGG | 0.236783 | 1:+16259257 | MsG0180001118.01.T01:CDS |
TTGAAGAGATTAACCTTCTA+AGG | 0.249355 | 1:+16258822 | MsG0180001118.01.T01:CDS |
TCTGCATGACCAAACAATTA+TGG | 0.255042 | 1:+16261264 | MsG0180001118.01.T01:CDS |
GTTATCGAAACAAATTATTA+TGG | 0.280899 | 1:+16260179 | MsG0180001118.01.T01:CDS |
ATAAGCATTAACAGCAAGTT+TGG | 0.293083 | 1:-16261086 | None:intergenic |
GATTATCACTGATAATTATA+TGG | 0.296879 | 1:-16261543 | None:intergenic |
GGCTGCAACACCATACTTAT+AGG | 0.299373 | 1:+16261421 | MsG0180001118.01.T01:three_prime_UTR |
TACCTTTGGTGATCGGAATA+AGG | 0.301057 | 1:-16258851 | None:intergenic |
ATAGCGGGGAATAGTGATTC+TGG | 0.309682 | 1:+16258728 | MsG0180001118.01.T01:five_prime_UTR |
TAACACCATGGCATTGTTCT+TGG | 0.312898 | 1:-16261344 | None:intergenic |
ACCGGTGGAAATAGAGGAAT+TGG | 0.315043 | 1:+16259169 | MsG0180001118.01.T01:CDS |
TAATGCTTATACAAGGCTTA+TGG | 0.345742 | 1:+16261099 | MsG0180001118.01.T01:CDS |
GAAACTATTGCTGTCGTTAC+CGG | 0.347929 | 1:+16259151 | MsG0180001118.01.T01:CDS |
CAGTGGTTGCAGGAAAATTA+TGG | 0.362541 | 1:+16259358 | MsG0180001118.01.T01:CDS |
CAAAACCTGCCCTATAAGTA+TGG | 0.364894 | 1:-16261431 | None:intergenic |
AATAAGGAATAGACCTTAGA+AGG | 0.365707 | 1:-16258835 | None:intergenic |
TGCTGGTGCTGAATCAATTA+GGG | 0.366104 | 1:+16259258 | MsG0180001118.01.T01:CDS |
GAGTAATATCGAGTTTCTTT+CGG | 0.367468 | 1:+16260961 | MsG0180001118.01.T01:CDS |
GAATTGGGTTTGAGATTTGT+AGG | 0.377648 | 1:+16259185 | MsG0180001118.01.T01:CDS |
GTTGAGGAAGGAGCTGATAC+TGG | 0.389307 | 1:+16261226 | MsG0180001118.01.T01:CDS |
CTGCATGACCAAACAATTAT+GGG | 0.389652 | 1:+16261265 | MsG0180001118.01.T01:CDS |
CCACTTTGTTCAGTGGTTGC+AGG | 0.392622 | 1:+16259348 | MsG0180001118.01.T01:CDS |
TTTCCTAACCTTATTATCAA+TGG | 0.399790 | 1:-16261462 | None:intergenic |
GAAGATGGAAGCTGGACATC+AGG | 0.400850 | 1:+16261028 | MsG0180001118.01.T01:CDS |
TGGGTGAAGACGGCTTTAAC+AGG | 0.403091 | 1:+16261184 | MsG0180001118.01.T01:CDS |
AGAACAATGCCATGGTGTTA+TGG | 0.409616 | 1:+16261347 | MsG0180001118.01.T01:three_prime_UTR |
AAGGAGCTGATACTGGAGTA+TGG | 0.430228 | 1:+16261233 | MsG0180001118.01.T01:CDS |
TTAATGAAACCATCCGTTGT+TGG | 0.467745 | 1:+16260233 | MsG0180001118.01.T01:CDS |
CCACTGAACAAAGTGGTTGA+TGG | 0.467844 | 1:-16259341 | None:intergenic |
TAGCGGGGAATAGTGATTCT+GGG | 0.468207 | 1:+16258729 | MsG0180001118.01.T01:five_prime_UTR |
GCTGGTGTTAATTTCAATCT+CGG | 0.468354 | 1:+16260125 | MsG0180001118.01.T01:CDS |
GCAGGAAGGTGGTTTGGATG+TGG | 0.470123 | 1:+16259285 | MsG0180001118.01.T01:CDS |
AATGGGTAAGGCGGAGAAGA+AGG | 0.474975 | 1:+16258769 | MsG0180001118.01.T01:exon |
TCACGTCTAGGTCGACTAAA+CGG | 0.479378 | 1:+16260278 | MsG0180001118.01.T01:CDS |
TTTCGGAGGAACTGATTGAC+AGG | 0.480683 | 1:+16260978 | MsG0180001118.01.T01:CDS |
CCACCATTGATAATAAGGTT+AGG | 0.481688 | 1:+16261459 | MsG0180001118.01.T01:three_prime_UTR |
TGTAGGCAACTTGCTACTCA+TGG | 0.483655 | 1:+16259202 | MsG0180001118.01.T01:CDS |
ACTGCTGTTAGTTTGCTGCT+AGG | 0.485420 | 1:+16261503 | MsG0180001118.01.T01:three_prime_UTR |
GCTGCAACACCATACTTATA+GGG | 0.498968 | 1:+16261422 | MsG0180001118.01.T01:three_prime_UTR |
TTGCTTCACTGCATATAAAT+GGG | 0.500794 | 1:+16258752 | MsG0180001118.01.T01:exon |
TTAACTGCTATTGCCCGGGT+TGG | 0.500994 | 1:+16261164 | MsG0180001118.01.T01:CDS |
TAACTGCTATTGCCCGGGTT+GGG | 0.501130 | 1:+16261165 | MsG0180001118.01.T01:CDS |
CTCTGTTGAAAATGCGCGCA+AGG | 0.504384 | 1:+16260157 | MsG0180001118.01.T01:CDS |
AATCACCAATGTAGCCTTGA+GGG | 0.505474 | 1:+16260931 | MsG0180001118.01.T01:CDS |
AAGATGGAAGCTGGACATCA+GGG | 0.508335 | 1:+16261029 | MsG0180001118.01.T01:CDS |
AGATTGATACCTTTGGTGAT+CGG | 0.520596 | 1:-16258858 | None:intergenic |
TAATTGTTTGGTCATGCAGA+AGG | 0.520763 | 1:-16261261 | None:intergenic |
CCGGTGGAAATAGAGGAATT+GGG | 0.523137 | 1:+16259170 | MsG0180001118.01.T01:CDS |
TTGTATGTGTTATGGCTTAG+CGG | 0.523393 | 1:+16261381 | MsG0180001118.01.T01:three_prime_UTR |
AACAAGTAGAAGATGGAAGC+TGG | 0.524013 | 1:+16261020 | MsG0180001118.01.T01:CDS |
CCTAACCTTATTATCAATGG+TGG | 0.526178 | 1:-16261459 | None:intergenic |
GAGTAATCAGTATATATTTG+AGG | 0.527703 | 1:-16261058 | None:intergenic |
CCATCAACCACTTTGTTCAG+TGG | 0.531554 | 1:+16259341 | MsG0180001118.01.T01:CDS |
CAACACCATACTTATAGGGC+AGG | 0.531569 | 1:+16261426 | MsG0180001118.01.T01:three_prime_UTR |
TAATGGTAGGTAAACAATGC+TGG | 0.537419 | 1:+16260107 | MsG0180001118.01.T01:intron |
TTTGTTAACTGCTATTGCCC+GGG | 0.539327 | 1:+16261160 | MsG0180001118.01.T01:CDS |
TTGCTGTTAATGCTTATACA+AGG | 0.539788 | 1:+16261092 | MsG0180001118.01.T01:CDS |
CCCAATTCCTCTATTTCCAC+CGG | 0.540422 | 1:-16259170 | None:intergenic |
TTGCCCGGGTTGGGTGAAGA+CGG | 0.541413 | 1:+16261174 | MsG0180001118.01.T01:CDS |
TTCCTTATTCCGATCACCAA+AGG | 0.551276 | 1:+16258849 | MsG0180001118.01.T01:CDS |
TTGCTCCCTCAAGGCTACAT+TGG | 0.555869 | 1:-16260936 | None:intergenic |
TCACTGCATATAAATGGGTA+AGG | 0.561657 | 1:+16258757 | MsG0180001118.01.T01:exon |
GTCGTTACCGGTGGAAATAG+AGG | 0.562574 | 1:+16259163 | MsG0180001118.01.T01:CDS |
CTTCTGGCCTTCTGGTCGCT+CGG | 0.566219 | 1:-16261134 | None:intergenic |
CCTGCAACCACTGAACAAAG+TGG | 0.566437 | 1:-16259348 | None:intergenic |
GATGGAAGCTGGACATCAGG+GGG | 0.568512 | 1:+16261031 | MsG0180001118.01.T01:CDS |
AAAGCCGTCTTCACCCAACC+CGG | 0.568919 | 1:-16261178 | None:intergenic |
ACATCAAGAGATGCTAATGC+TGG | 0.581456 | 1:+16259241 | MsG0180001118.01.T01:CDS |
AAGCTTTCCGAGCGACCAGA+AGG | 0.585315 | 1:+16261127 | MsG0180001118.01.T01:CDS |
TGCAGGGAACAATACTGTTG+AGG | 0.586655 | 1:+16261210 | MsG0180001118.01.T01:CDS |
TAATATCGAGTTTCTTTCGG+AGG | 0.586814 | 1:+16260964 | MsG0180001118.01.T01:CDS |
AATTGTTTGGTCATGCAGAA+GGG | 0.587655 | 1:-16261260 | None:intergenic |
ACCTTATTATCAATGGTGGT+CGG | 0.588454 | 1:-16261455 | None:intergenic |
GTAAATGTAAGCTCACGTCT+AGG | 0.591413 | 1:+16260266 | MsG0180001118.01.T01:CDS |
ATTACTCAGTTGCTCCCTCA+AGG | 0.595356 | 1:-16260945 | None:intergenic |
ATTCGAGCACCAACAACGGA+TGG | 0.604995 | 1:-16260242 | None:intergenic |
GGGAACAATACTGTTGAGGA+AGG | 0.613804 | 1:+16261214 | MsG0180001118.01.T01:CDS |
TACAATTCGAGCACCAACAA+CGG | 0.619020 | 1:-16260246 | None:intergenic |
AGATGGAAGCTGGACATCAG+GGG | 0.625603 | 1:+16261030 | MsG0180001118.01.T01:CDS |
AGCAGCCAAGAACAATGCCA+TGG | 0.632347 | 1:+16261339 | MsG0180001118.01.T01:three_prime_UTR |
TAAGGCGGAGAAGAAGGAGA+AGG | 0.634663 | 1:+16258775 | MsG0180001118.01.T01:CDS |
AAGCCGTCTTCACCCAACCC+GGG | 0.642912 | 1:-16261177 | None:intergenic |
GAATCACCAATGTAGCCTTG+AGG | 0.646638 | 1:+16260930 | MsG0180001118.01.T01:CDS |
ACTATTGCTGTCGTTACCGG+TGG | 0.647178 | 1:+16259154 | MsG0180001118.01.T01:CDS |
TGGTTGCAGGAAAATTATGG+TGG | 0.649893 | 1:+16259361 | MsG0180001118.01.T01:CDS |
CTTATACAAGGCTTATGGCG+AGG | 0.650044 | 1:+16261104 | MsG0180001118.01.T01:CDS |
TAGGTCGACTAAACGGAAGA+CGG | 0.659235 | 1:+16260285 | MsG0180001118.01.T01:CDS |
CTGCATATAAATGGGTAAGG+CGG | 0.662103 | 1:+16258760 | MsG0180001118.01.T01:exon |
TCCGCTATGCCATAACACCA+TGG | 0.672600 | 1:-16261356 | None:intergenic |
GCCATGGTGTTATGGCATAG+CGG | 0.696253 | 1:+16261355 | MsG0180001118.01.T01:three_prime_UTR |
ATGGAAGCTGGACATCAGGG+GGG | 0.712462 | 1:+16261032 | MsG0180001118.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATTTTAGAATAATTGATTT+TGG | - | Chr1:16259024-16259043 | None:intergenic | 15.0% |
!! | AAAAACTATTAGGAAAGATT+TGG | + | Chr1:16259855-16259874 | MsG0180001118.01.T01:intron | 20.0% |
!! | ATCAAAATGGATAAAAATCT+TGG | - | Chr1:16259451-16259470 | None:intergenic | 20.0% |
!! | CTTCTAACTATTATCTTTAA+TGG | + | Chr1:16260090-16260109 | MsG0180001118.01.T01:intron | 20.0% |
!! | GATTATCACTGATAATTATA+TGG | - | Chr1:16261546-16261565 | None:intergenic | 20.0% |
!! | GTTATCGAAACAAATTATTA+TGG | + | Chr1:16260179-16260198 | MsG0180001118.01.T01:CDS | 20.0% |
!! | TAACTATTATCTTTAATGGT+AGG | + | Chr1:16260094-16260113 | MsG0180001118.01.T01:intron | 20.0% |
!!! | AAATGTAGAGTTGATATTAA+TGG | + | Chr1:16260890-16260909 | MsG0180001118.01.T01:intron | 20.0% |
!!! | AATGTAGAGTTGATATTAAT+GGG | + | Chr1:16260891-16260910 | MsG0180001118.01.T01:intron | 20.0% |
!!! | AGTAACAAAAATTTTAACGT+TGG | - | Chr1:16260704-16260723 | None:intergenic | 20.0% |
!!! | AGTGATAATCTAATTCTTTT+AGG | + | Chr1:16261556-16261575 | MsG0180001118.01.T01:three_prime_UTR | 20.0% |
!!! | ATTTCACTTTTAAGTGTTTA+TGG | + | Chr1:16258888-16258907 | MsG0180001118.01.T01:intron | 20.0% |
!!! | GATTACAATTTTTGCAAAAA+TGG | - | Chr1:16260325-16260344 | None:intergenic | 20.0% |
!!! | TTATCCATTTTGATTACTTT+TGG | + | Chr1:16259457-16259476 | MsG0180001118.01.T01:intron | 20.0% |
!!! | TTATGTCAGATAGAAATTTT+AGG | - | Chr1:16260612-16260631 | None:intergenic | 20.0% |
! | AAAAACTTCCCATAATTGTT+TGG | - | Chr1:16261276-16261295 | None:intergenic | 25.0% |
! | AGTCTGAATTACATATATTG+TGG | + | Chr1:16260671-16260690 | MsG0180001118.01.T01:intron | 25.0% |
! | CAATCCAAAAGTAATCAAAA+TGG | - | Chr1:16259464-16259483 | None:intergenic | 25.0% |
! | GAGTAATCAGTATATATTTG+AGG | - | Chr1:16261061-16261080 | None:intergenic | 25.0% |
! | TCTTTCACATTTGATCTAAA+TGG | + | Chr1:16259548-16259567 | MsG0180001118.01.T01:intron | 25.0% |
! | TGAGAATAAAATAAGCATAG+TGG | + | Chr1:16259609-16259628 | MsG0180001118.01.T01:intron | 25.0% |
! | TTTCCTAACCTTATTATCAA+TGG | - | Chr1:16261465-16261484 | None:intergenic | 25.0% |
!! | TCTTTCCTAATAGTTTTTCT+AGG | - | Chr1:16259853-16259872 | None:intergenic | 25.0% |
!! | TTTTTACAACAAGTAGAAGA+TGG | + | Chr1:16261013-16261032 | MsG0180001118.01.T01:CDS | 25.0% |
!!! | AGATGCATTTTTTTACTTTG+AGG | - | Chr1:16260389-16260408 | None:intergenic | 25.0% |
!!! | ATTTTAGGTGATAAGGTAAT+AGG | - | Chr1:16260597-16260616 | None:intergenic | 25.0% |
!!! | GATAGAAATTTTAGGTGATA+AGG | - | Chr1:16260604-16260623 | None:intergenic | 25.0% |
!!! | TGCTTATTTTATTCTCATGT+TGG | - | Chr1:16259606-16259625 | None:intergenic | 25.0% |
AAATCTGAGCAAAACTATGA+AGG | - | Chr1:16260356-16260375 | None:intergenic | 30.0% | |
AATAAGGAATAGACCTTAGA+AGG | - | Chr1:16258838-16258857 | None:intergenic | 30.0% | |
AGCAGTTAACAAAAATCTTC+TGG | - | Chr1:16261153-16261172 | None:intergenic | 30.0% | |
ATAAGCATTAACAGCAAGTT+TGG | - | Chr1:16261089-16261108 | None:intergenic | 30.0% | |
ATAGTTTACCACAAAGTAGA+TGG | - | Chr1:16260819-16260838 | None:intergenic | 30.0% | |
ATGACTATATTAGAGAGAGT+TGG | + | Chr1:16259686-16259705 | MsG0180001118.01.T01:intron | 30.0% | |
CGAAAAATTAGAAAAAGCTC+CGG | - | Chr1:16259098-16259117 | None:intergenic | 30.0% | |
GAAATTCCATAAACCATACA+AGG | - | Chr1:16259062-16259081 | None:intergenic | 30.0% | |
GAAGACCTAGAAAAACTATT+AGG | + | Chr1:16259845-16259864 | MsG0180001118.01.T01:intron | 30.0% | |
GAGTAATATCGAGTTTCTTT+CGG | + | Chr1:16260961-16260980 | MsG0180001118.01.T01:CDS | 30.0% | |
GCAAAATAGATTGATACCTT+TGG | - | Chr1:16258868-16258887 | None:intergenic | 30.0% | |
GTGATAAGGTAATAGGATAA+GGG | - | Chr1:16260590-16260609 | None:intergenic | 30.0% | |
TAATGCTTATACAAGGCTTA+TGG | + | Chr1:16261099-16261118 | MsG0180001118.01.T01:CDS | 30.0% | |
TGACTATATTAGAGAGAGTT+GGG | + | Chr1:16259687-16259706 | MsG0180001118.01.T01:intron | 30.0% | |
TGATCTTAACATTGTGAACA+TGG | + | Chr1:16259987-16260006 | MsG0180001118.01.T01:intron | 30.0% | |
TTATGGTGGTTTAGATATTC+TGG | + | Chr1:16259375-16259394 | MsG0180001118.01.T01:CDS | 30.0% | |
TTGAAGAGATTAACCTTCTA+AGG | + | Chr1:16258822-16258841 | MsG0180001118.01.T01:CDS | 30.0% | |
TTGCTTCACTGCATATAAAT+GGG | + | Chr1:16258752-16258771 | MsG0180001118.01.T01:exon | 30.0% | |
! | ACTATGAAGTATGTTGATTG+TGG | + | Chr1:16260043-16260062 | MsG0180001118.01.T01:intron | 30.0% |
! | CAATTTTGAATACATGTAGG+TGG | + | Chr1:16259119-16259138 | MsG0180001118.01.T01:intron | 30.0% |
! | CGTCAATTTTGAATACATGT+AGG | + | Chr1:16259116-16259135 | MsG0180001118.01.T01:intron | 30.0% |
! | TTGCTGTTAATGCTTATACA+AGG | + | Chr1:16261092-16261111 | MsG0180001118.01.T01:CDS | 30.0% |
AAGGAATTGCAGCATTTGAA+AGG | - | Chr1:16260754-16260773 | None:intergenic | 35.0% | |
AATTGTTTGGTCATGCAGAA+GGG | - | Chr1:16261263-16261282 | None:intergenic | 35.0% | |
AATTTCAAACCACTCTTGTC+CGG | + | Chr1:16259076-16259095 | MsG0180001118.01.T01:intron | 35.0% | |
ACAACGGATGGTTTCATTAA+TGG | - | Chr1:16260233-16260252 | None:intergenic | 35.0% | |
ACCTATAGTAGAAAAGATGG+TGG | + | Chr1:16259715-16259734 | MsG0180001118.01.T01:intron | 35.0% | |
ACCTTATTATCAATGGTGGT+CGG | - | Chr1:16261458-16261477 | None:intergenic | 35.0% | |
ACTTTGTCCCCTATGAAATA+GGG | + | Chr1:16260496-16260515 | MsG0180001118.01.T01:intron | 35.0% | |
AGCACCTATAGTAGAAAAGA+TGG | + | Chr1:16259712-16259731 | MsG0180001118.01.T01:intron | 35.0% | |
AGTCATGGTAAAACACCTTT+AGG | - | Chr1:16260479-16260498 | None:intergenic | 35.0% | |
ATAAGGTAATAGGATAAGGG+CGG | - | Chr1:16260587-16260606 | None:intergenic | 35.0% | |
ATGGTGTATGGTAGAACATA+TGG | + | Chr1:16259901-16259920 | MsG0180001118.01.T01:intron | 35.0% | |
CACCTATAGATTCTGTAGTA+AGG | + | Chr1:16259773-16259792 | MsG0180001118.01.T01:intron | 35.0% | |
CATCACTAGAGTATGCTAAA+AGG | - | Chr1:16260773-16260792 | None:intergenic | 35.0% | |
CCTAACCTTATTATCAATGG+TGG | - | Chr1:16261462-16261481 | None:intergenic | 35.0% | |
CTCCTTACTACAGAATCTAT+AGG | - | Chr1:16259778-16259797 | None:intergenic | 35.0% | |
CTGCATGACCAAACAATTAT+GGG | + | Chr1:16261265-16261284 | MsG0180001118.01.T01:CDS | 35.0% | |
GAAGTTCCTTGTATGGTTTA+TGG | + | Chr1:16259053-16259072 | MsG0180001118.01.T01:intron | 35.0% | |
GACTATATTAGAGAGAGTTG+GGG | + | Chr1:16259688-16259707 | MsG0180001118.01.T01:intron | 35.0% | |
GGTGATAAGGTAATAGGATA+AGG | - | Chr1:16260591-16260610 | None:intergenic | 35.0% | |
GTGAACATGGAATTAAACAC+AGG | + | Chr1:16260000-16260019 | MsG0180001118.01.T01:intron | 35.0% | |
GTTGCTTCACTGCATATAAA+TGG | + | Chr1:16258751-16258770 | MsG0180001118.01.T01:exon | 35.0% | |
TAATATCGAGTTTCTTTCGG+AGG | + | Chr1:16260964-16260983 | MsG0180001118.01.T01:CDS | 35.0% | |
TAATGGTAGGTAAACAATGC+TGG | + | Chr1:16260107-16260126 | MsG0180001118.01.T01:intron | 35.0% | |
TAATTGTTTGGTCATGCAGA+AGG | - | Chr1:16261264-16261283 | None:intergenic | 35.0% | |
TAGCAAGTGTTCACTATACT+GGG | - | Chr1:16258984-16259003 | None:intergenic | 35.0% | |
TAGTGAGTTGTACCAAAACA+TGG | + | Chr1:16259882-16259901 | MsG0180001118.01.T01:intron | 35.0% | |
TCACTGCATATAAATGGGTA+AGG | + | Chr1:16258757-16258776 | MsG0180001118.01.T01:exon | 35.0% | |
TCTGCATGACCAAACAATTA+TGG | + | Chr1:16261264-16261283 | MsG0180001118.01.T01:CDS | 35.0% | |
TTAATGAAACCATCCGTTGT+TGG | + | Chr1:16260233-16260252 | MsG0180001118.01.T01:CDS | 35.0% | |
TTAGCAAGTGTTCACTATAC+TGG | - | Chr1:16258985-16259004 | None:intergenic | 35.0% | |
TTGTACCAAAACATGGTGTA+TGG | + | Chr1:16259889-16259908 | MsG0180001118.01.T01:intron | 35.0% | |
TTGTATGTGTTATGGCTTAG+CGG | + | Chr1:16261381-16261400 | MsG0180001118.01.T01:three_prime_UTR | 35.0% | |
! | AAATAAGCATAGTGGAGATG+AGG | + | Chr1:16259617-16259636 | MsG0180001118.01.T01:intron | 35.0% |
! | AGATTGATACCTTTGGTGAT+CGG | - | Chr1:16258861-16258880 | None:intergenic | 35.0% |
! | CATCTCACTGTCATCTTTTT+GGG | + | Chr1:16260404-16260423 | MsG0180001118.01.T01:intron | 35.0% |
! | CCACCATTGATAATAAGGTT+AGG | + | Chr1:16261459-16261478 | MsG0180001118.01.T01:three_prime_UTR | 35.0% |
! | GAATTGGGTTTGAGATTTGT+AGG | + | Chr1:16259185-16259204 | MsG0180001118.01.T01:CDS | 35.0% |
! | GCTGGTGTTAATTTCAATCT+CGG | + | Chr1:16260125-16260144 | MsG0180001118.01.T01:CDS | 35.0% |
! | TCCACCATCTTTTCTACTAT+AGG | - | Chr1:16259719-16259738 | None:intergenic | 35.0% |
! | TGAATCAATTAGGGTTTTGC+AGG | + | Chr1:16259267-16259286 | MsG0180001118.01.T01:CDS | 35.0% |
! | TTCTACCATACACCATGTTT+TGG | - | Chr1:16259897-16259916 | None:intergenic | 35.0% |
! | TTTGATTGCGCTTCATTTTG+TGG | + | Chr1:16260852-16260871 | MsG0180001118.01.T01:intron | 35.0% |
! | TTTTGAATACATGTAGGTGG+TGG | + | Chr1:16259122-16259141 | MsG0180001118.01.T01:intron | 35.0% |
! | TTTTGTTAACTGCTATTGCC+CGG | + | Chr1:16261159-16261178 | MsG0180001118.01.T01:CDS | 35.0% |
!! | AGCGGATTTTGTATGTGTTA+TGG | + | Chr1:16261373-16261392 | MsG0180001118.01.T01:three_prime_UTR | 35.0% |
!! | TTCTGAAATATACCGCCTAA+AGG | + | Chr1:16260461-16260480 | MsG0180001118.01.T01:intron | 35.0% |
!! | TTGTTCTGAAGTTCCTTGTA+TGG | + | Chr1:16259046-16259065 | MsG0180001118.01.T01:intron | 35.0% |
!!! | AAGTTTTTTTGCTGAGAGAC+GGG | + | Chr1:16261288-16261307 | MsG0180001118.01.T01:CDS | 35.0% |
!!! | GAAGTTTTTTTGCTGAGAGA+CGG | + | Chr1:16261287-16261306 | MsG0180001118.01.T01:CDS | 35.0% |
AACAAGTAGAAGATGGAAGC+TGG | + | Chr1:16261020-16261039 | MsG0180001118.01.T01:CDS | 40.0% | |
ACATCAAGAGATGCTAATGC+TGG | + | Chr1:16259241-16259260 | MsG0180001118.01.T01:CDS | 40.0% | |
AGCAAGTGTTCACTATACTG+GGG | - | Chr1:16258983-16259002 | None:intergenic | 40.0% | |
AGTAAGGAGAGTAGATCAGA+TGG | + | Chr1:16259789-16259808 | MsG0180001118.01.T01:intron | 40.0% | |
ATCTAAATGGAACAGAGTGC+TGG | + | Chr1:16259561-16259580 | MsG0180001118.01.T01:intron | 40.0% | |
CAAAACCTGCCCTATAAGTA+TGG | - | Chr1:16261434-16261453 | None:intergenic | 40.0% | |
CAGTGGTTGCAGGAAAATTA+TGG | + | Chr1:16259358-16259377 | MsG0180001118.01.T01:CDS | 40.0% | |
CATGGTAAAACACCTTTAGG+CGG | - | Chr1:16260476-16260495 | None:intergenic | 40.0% | |
CTACAGACCCCTATTTCATA+GGG | - | Chr1:16260507-16260526 | None:intergenic | 40.0% | |
CTGCATATAAATGGGTAAGG+CGG | + | Chr1:16258760-16258779 | MsG0180001118.01.T01:exon | 40.0% | |
CTTTGTCCCCTATGAAATAG+GGG | + | Chr1:16260497-16260516 | MsG0180001118.01.T01:intron | 40.0% | |
GAAACTATTGCTGTCGTTAC+CGG | + | Chr1:16259151-16259170 | MsG0180001118.01.T01:CDS | 40.0% | |
GACTTTGTCCCCTATGAAAT+AGG | + | Chr1:16260495-16260514 | MsG0180001118.01.T01:intron | 40.0% | |
GCTGCAACACCATACTTATA+GGG | + | Chr1:16261422-16261441 | MsG0180001118.01.T01:three_prime_UTR | 40.0% | |
GGTCTGTAGCTGATGTTTAT+CGG | + | Chr1:16260518-16260537 | MsG0180001118.01.T01:intron | 40.0% | |
GTAAATGTAAGCTCACGTCT+AGG | + | Chr1:16260266-16260285 | MsG0180001118.01.T01:CDS | 40.0% | |
GTGGTAAGACTAGATGAGAT+AGG | + | Chr1:16259656-16259675 | MsG0180001118.01.T01:intron | 40.0% | |
TAACACCATGGCATTGTTCT+TGG | - | Chr1:16261347-16261366 | None:intergenic | 40.0% | |
TAAGGTAATAGGATAAGGGC+GGG | - | Chr1:16260586-16260605 | None:intergenic | 40.0% | |
TACAATTCGAGCACCAACAA+CGG | - | Chr1:16260249-16260268 | None:intergenic | 40.0% | |
TACAGACCCCTATTTCATAG+GGG | - | Chr1:16260506-16260525 | None:intergenic | 40.0% | |
TCACTAGACCATCTACTTTG+TGG | + | Chr1:16260808-16260827 | MsG0180001118.01.T01:intron | 40.0% | |
TGGATAGATTACAACAGCAC+AGG | - | Chr1:16259431-16259450 | None:intergenic | 40.0% | |
TGGTTGCAGGAAAATTATGG+TGG | + | Chr1:16259361-16259380 | MsG0180001118.01.T01:CDS | 40.0% | |
TTCCTTATTCCGATCACCAA+AGG | + | Chr1:16258849-16258868 | MsG0180001118.01.T01:CDS | 40.0% | |
TTTCATAGGGGACAAAGTCA+TGG | - | Chr1:16260494-16260513 | None:intergenic | 40.0% | |
TTTGTTAACTGCTATTGCCC+GGG | + | Chr1:16261160-16261179 | MsG0180001118.01.T01:CDS | 40.0% | |
! | AAGCCTTTTCTCACTAAGTG+GGG | - | Chr1:16259950-16259969 | None:intergenic | 40.0% |
! | AATCACCAATGTAGCCTTGA+GGG | + | Chr1:16260931-16260950 | MsG0180001118.01.T01:CDS | 40.0% |
! | ACAAAAATCTTCTGGCCTTC+TGG | - | Chr1:16261145-16261164 | None:intergenic | 40.0% |
! | AGAACAATGCCATGGTGTTA+TGG | + | Chr1:16261347-16261366 | MsG0180001118.01.T01:three_prime_UTR | 40.0% |
! | ATGCTGGTGCTGAATCAATT+AGG | + | Chr1:16259257-16259276 | MsG0180001118.01.T01:CDS | 40.0% |
! | CAAGCCTTTTCTCACTAAGT+GGG | - | Chr1:16259951-16259970 | None:intergenic | 40.0% |
! | GCATCTCACTGTCATCTTTT+TGG | + | Chr1:16260403-16260422 | MsG0180001118.01.T01:intron | 40.0% |
! | TACCTTTGGTGATCGGAATA+AGG | - | Chr1:16258854-16258873 | None:intergenic | 40.0% |
! | TCAATTAGGGTTTTGCAGGA+AGG | + | Chr1:16259271-16259290 | MsG0180001118.01.T01:CDS | 40.0% |
! | TCCGACCACCATTGATAATA+AGG | + | Chr1:16261454-16261473 | MsG0180001118.01.T01:three_prime_UTR | 40.0% |
! | TGCTGGTGCTGAATCAATTA+GGG | + | Chr1:16259258-16259277 | MsG0180001118.01.T01:CDS | 40.0% |
AAGATGGAAGCTGGACATCA+GGG | + | Chr1:16261029-16261048 | MsG0180001118.01.T01:CDS | 45.0% | |
AAGGAGCTGATACTGGAGTA+TGG | + | Chr1:16261233-16261252 | MsG0180001118.01.T01:CDS | 45.0% | |
AAGGTAATAGGATAAGGGCG+GGG | - | Chr1:16260585-16260604 | None:intergenic | 45.0% | |
ACCGGTGGAAATAGAGGAAT+TGG | + | Chr1:16259169-16259188 | MsG0180001118.01.T01:CDS | 45.0% | |
ATTACTCAGTTGCTCCCTCA+AGG | - | Chr1:16260948-16260967 | None:intergenic | 45.0% | |
CAACACCATACTTATAGGGC+AGG | + | Chr1:16261426-16261445 | MsG0180001118.01.T01:three_prime_UTR | 45.0% | |
CCACTGAACAAAGTGGTTGA+TGG | - | Chr1:16259344-16259363 | None:intergenic | 45.0% | |
CCACTTAGTGAGAAAAGGCT+TGG | + | Chr1:16259949-16259968 | MsG0180001118.01.T01:intron | 45.0% | |
CCATCAACCACTTTGTTCAG+TGG | + | Chr1:16259341-16259360 | MsG0180001118.01.T01:CDS | 45.0% | |
CCCAATTCCTCTATTTCCAC+CGG | - | Chr1:16259173-16259192 | None:intergenic | 45.0% | |
CCGGTGGAAATAGAGGAATT+GGG | + | Chr1:16259170-16259189 | MsG0180001118.01.T01:CDS | 45.0% | |
CTTATACAAGGCTTATGGCG+AGG | + | Chr1:16261104-16261123 | MsG0180001118.01.T01:CDS | 45.0% | |
GATTACAACAGCACAGGCTA+TGG | - | Chr1:16259425-16259444 | None:intergenic | 45.0% | |
GCTACAGACCCCTATTTCAT+AGG | - | Chr1:16260508-16260527 | None:intergenic | 45.0% | |
GGCTGCAACACCATACTTAT+AGG | + | Chr1:16261421-16261440 | MsG0180001118.01.T01:three_prime_UTR | 45.0% | |
GGGAACAATACTGTTGAGGA+AGG | + | Chr1:16261214-16261233 | MsG0180001118.01.T01:CDS | 45.0% | |
TAGCGGGGAATAGTGATTCT+GGG | + | Chr1:16258729-16258748 | MsG0180001118.01.T01:five_prime_UTR | 45.0% | |
TAGGTCGACTAAACGGAAGA+CGG | + | Chr1:16260285-16260304 | MsG0180001118.01.T01:CDS | 45.0% | |
TCACGTCTAGGTCGACTAAA+CGG | + | Chr1:16260278-16260297 | MsG0180001118.01.T01:CDS | 45.0% | |
TGACCCCACTTAGTGAGAAA+AGG | + | Chr1:16259944-16259963 | MsG0180001118.01.T01:intron | 45.0% | |
TGCAGGGAACAATACTGTTG+AGG | + | Chr1:16261210-16261229 | MsG0180001118.01.T01:CDS | 45.0% | |
TTTCGGAGGAACTGATTGAC+AGG | + | Chr1:16260978-16260997 | MsG0180001118.01.T01:CDS | 45.0% | |
! | AGTTGATGCAGTGAAGCAGA+TGG | + | Chr1:16260635-16260654 | MsG0180001118.01.T01:intron | 45.0% |
! | ATAGCGGGGAATAGTGATTC+TGG | + | Chr1:16258728-16258747 | MsG0180001118.01.T01:five_prime_UTR | 45.0% |
! | ATTAGGGTTTTGCAGGAAGG+TGG | + | Chr1:16259274-16259293 | MsG0180001118.01.T01:CDS | 45.0% |
! | CCAAGCCTTTTCTCACTAAG+TGG | - | Chr1:16259952-16259971 | None:intergenic | 45.0% |
! | GAATCACCAATGTAGCCTTG+AGG | + | Chr1:16260930-16260949 | MsG0180001118.01.T01:CDS | 45.0% |
! | TGTATTTGCCCCTCTAGAAG+AGG | - | Chr1:16260555-16260574 | None:intergenic | 45.0% |
!! | ACGGCTTTAACAGGTTTTGC+AGG | + | Chr1:16261193-16261212 | MsG0180001118.01.T01:CDS | 45.0% |
!! | ACTGCTGTTAGTTTGCTGCT+AGG | + | Chr1:16261503-16261522 | MsG0180001118.01.T01:three_prime_UTR | 45.0% |
!! | CGGCTTTAACAGGTTTTGCA+GGG | + | Chr1:16261194-16261213 | MsG0180001118.01.T01:CDS | 45.0% |
!! | TGTAGGCAACTTGCTACTCA+TGG | + | Chr1:16259202-16259221 | MsG0180001118.01.T01:CDS | 45.0% |
!!! | TGGCTTAGCGGAGTTTTTTC+TGG | + | Chr1:16261393-16261412 | MsG0180001118.01.T01:three_prime_UTR | 45.0% |
AATGGGTAAGGCGGAGAAGA+AGG | + | Chr1:16258769-16258788 | MsG0180001118.01.T01:exon | 50.0% | |
ACTAAGTGGGGTCAGCTACA+TGG | - | Chr1:16259938-16259957 | None:intergenic | 50.0% | |
ACTATTGCTGTCGTTACCGG+TGG | + | Chr1:16259154-16259173 | MsG0180001118.01.T01:CDS | 50.0% | |
AGATGGAAGCTGGACATCAG+GGG | + | Chr1:16261030-16261049 | MsG0180001118.01.T01:CDS | 50.0% | |
AGCAGCCAAGAACAATGCCA+TGG | + | Chr1:16261339-16261358 | MsG0180001118.01.T01:three_prime_UTR | 50.0% | |
AGGATGTTGCGTTGGATGTG+TGG | + | Chr1:16259637-16259656 | MsG0180001118.01.T01:intron | 50.0% | |
ATTCGAGCACCAACAACGGA+TGG | - | Chr1:16260245-16260264 | None:intergenic | 50.0% | |
CCACTTTGTTCAGTGGTTGC+AGG | + | Chr1:16259348-16259367 | MsG0180001118.01.T01:CDS | 50.0% | |
CCTGCAACCACTGAACAAAG+TGG | - | Chr1:16259351-16259370 | None:intergenic | 50.0% | |
CTCTGTTGAAAATGCGCGCA+AGG | + | Chr1:16260157-16260176 | MsG0180001118.01.T01:CDS | 50.0% | |
GAAAAAGCTCCGGACAAGAG+TGG | - | Chr1:16259088-16259107 | None:intergenic | 50.0% | |
GAAGATGGAAGCTGGACATC+AGG | + | Chr1:16261028-16261047 | MsG0180001118.01.T01:CDS | 50.0% | |
GTCGTTACCGGTGGAAATAG+AGG | + | Chr1:16259163-16259182 | MsG0180001118.01.T01:CDS | 50.0% | |
GTTGAGGAAGGAGCTGATAC+TGG | + | Chr1:16261226-16261245 | MsG0180001118.01.T01:CDS | 50.0% | |
TAACTGCTATTGCCCGGGTT+GGG | + | Chr1:16261165-16261184 | MsG0180001118.01.T01:CDS | 50.0% | |
TAAGGCGGAGAAGAAGGAGA+AGG | + | Chr1:16258775-16258794 | MsG0180001118.01.T01:CDS | 50.0% | |
TAGCCGCTTCCTCTTCTAGA+GGG | + | Chr1:16260543-16260562 | MsG0180001118.01.T01:intron | 50.0% | |
TCCGCTATGCCATAACACCA+TGG | - | Chr1:16261359-16261378 | None:intergenic | 50.0% | |
TGGAGATGAGGATGTTGCGT+TGG | + | Chr1:16259629-16259648 | MsG0180001118.01.T01:intron | 50.0% | |
TGTCAGATCGCTAGAGACAG+AGG | + | Chr1:16259823-16259842 | MsG0180001118.01.T01:intron | 50.0% | |
TTAACTGCTATTGCCCGGGT+TGG | + | Chr1:16261164-16261183 | MsG0180001118.01.T01:CDS | 50.0% | |
TTAGCCGCTTCCTCTTCTAG+AGG | + | Chr1:16260542-16260561 | MsG0180001118.01.T01:intron | 50.0% | |
TTGCTCCCTCAAGGCTACAT+TGG | - | Chr1:16260939-16260958 | None:intergenic | 50.0% | |
! | GGTTTTGCAGGAAGGTGGTT+TGG | + | Chr1:16259279-16259298 | MsG0180001118.01.T01:CDS | 50.0% |
! | TGGGTGAAGACGGCTTTAAC+AGG | + | Chr1:16261184-16261203 | MsG0180001118.01.T01:CDS | 50.0% |
!! | GCCATGGTGTTATGGCATAG+CGG | + | Chr1:16261355-16261374 | MsG0180001118.01.T01:three_prime_UTR | 50.0% |
!!! | GCGGAGTTTTTTCTGGTCGT+AGG | + | Chr1:16261400-16261419 | MsG0180001118.01.T01:three_prime_UTR | 50.0% |
AAAGCCGTCTTCACCCAACC+CGG | - | Chr1:16261181-16261200 | None:intergenic | 55.0% | |
AAGCTTTCCGAGCGACCAGA+AGG | + | Chr1:16261127-16261146 | MsG0180001118.01.T01:CDS | 55.0% | |
AATAGGATAAGGGCGGGGTC+AGG | - | Chr1:16260580-16260599 | None:intergenic | 55.0% | |
ATGGAAGCTGGACATCAGGG+GGG | + | Chr1:16261032-16261051 | MsG0180001118.01.T01:CDS | 55.0% | |
GATGGAAGCTGGACATCAGG+GGG | + | Chr1:16261031-16261050 | MsG0180001118.01.T01:CDS | 55.0% | |
! | AGCCGCTTCCTCTTCTAGAG+GGG | + | Chr1:16260544-16260563 | MsG0180001118.01.T01:intron | 55.0% |
! | GCAGGAAGGTGGTTTGGATG+TGG | + | Chr1:16259285-16259304 | MsG0180001118.01.T01:CDS | 55.0% |
! | TGCCCCTCTAGAAGAGGAAG+CGG | - | Chr1:16260549-16260568 | None:intergenic | 55.0% |
!! | GAACAGAGTGCTGGCTTGCT+GGG | + | Chr1:16259570-16259589 | MsG0180001118.01.T01:intron | 55.0% |
AAGCCGTCTTCACCCAACCC+GGG | - | Chr1:16261180-16261199 | None:intergenic | 60.0% | |
! | CTTCTGGCCTTCTGGTCGCT+CGG | - | Chr1:16261137-16261156 | None:intergenic | 60.0% |
! | TTGCCCGGGTTGGGTGAAGA+CGG | + | Chr1:16261174-16261193 | MsG0180001118.01.T01:CDS | 60.0% |
!! | GGAACAGAGTGCTGGCTTGC+TGG | + | Chr1:16259569-16259588 | MsG0180001118.01.T01:intron | 60.0% |
GAAGCTGGACATCAGGGGGG+TGG | + | Chr1:16261035-16261054 | MsG0180001118.01.T01:CDS | 65.0% | |
!! | CAGAGTGCTGGCTTGCTGGG+CGG | + | Chr1:16259573-16259592 | MsG0180001118.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 16258728 | 16261582 | 16258728 | ID=MsG0180001118.01;Name=MsG0180001118.01 |
Chr1 | mRNA | 16258728 | 16261582 | 16258728 | ID=MsG0180001118.01.T01;Parent=MsG0180001118.01;Name=MsG0180001118.01.T01;_AED=0.36;_eAED=0.36;_QI=42|1|1|1|1|1|4|258|316 |
Chr1 | exon | 16258728 | 16258870 | 16258728 | ID=MsG0180001118.01.T01:exon:31248;Parent=MsG0180001118.01.T01 |
Chr1 | exon | 16259138 | 16259396 | 16259138 | ID=MsG0180001118.01.T01:exon:31249;Parent=MsG0180001118.01.T01 |
Chr1 | exon | 16260116 | 16260310 | 16260116 | ID=MsG0180001118.01.T01:exon:31250;Parent=MsG0180001118.01.T01 |
Chr1 | exon | 16260929 | 16261582 | 16260929 | ID=MsG0180001118.01.T01:exon:31251;Parent=MsG0180001118.01.T01 |
Chr1 | five_prime_UTR | 16258728 | 16258769 | 16258728 | ID=MsG0180001118.01.T01:five_prime_utr;Parent=MsG0180001118.01.T01 |
Chr1 | CDS | 16258770 | 16258870 | 16258770 | ID=MsG0180001118.01.T01:cds;Parent=MsG0180001118.01.T01 |
Chr1 | CDS | 16259138 | 16259396 | 16259138 | ID=MsG0180001118.01.T01:cds;Parent=MsG0180001118.01.T01 |
Chr1 | CDS | 16260116 | 16260310 | 16260116 | ID=MsG0180001118.01.T01:cds;Parent=MsG0180001118.01.T01 |
Chr1 | CDS | 16260929 | 16261324 | 16260929 | ID=MsG0180001118.01.T01:cds;Parent=MsG0180001118.01.T01 |
Chr1 | three_prime_UTR | 16261325 | 16261582 | 16261325 | ID=MsG0180001118.01.T01:three_prime_utr;Parent=MsG0180001118.01.T01 |
Gene Sequence |
Protein sequence |