Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000568.01.T01 | XP_013465830.1 | 77.841 | 176 | 5 | 1 | 1 | 142 | 1 | 176 | 4.77E-87 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000568.01.T01 | A0A072VE84 | 77.841 | 176 | 5 | 1 | 1 | 142 | 1 | 176 | 2.28e-87 | 266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0180000568.01 | 0.812699 | 3.718215e-51 | 2.380423e-48 |
| MsG0080048152.01 | MsG0180000568.01 | 0.825317 | 5.005735e-54 | 4.547149e-51 |
| MsG0080048383.01 | MsG0180000568.01 | 0.833445 | 5.310448e-56 | 6.117211e-53 |
| MsG0080048784.01 | MsG0180000568.01 | 0.808795 | 2.598355e-50 | 1.499543e-47 |
| MsG0080048815.01 | MsG0180000568.01 | 0.816051 | 6.749740e-52 | 4.732704e-49 |
| MsG0080048856.01 | MsG0180000568.01 | 0.805571 | 1.251859e-49 | 6.645540e-47 |
| MsG0080048968.01 | MsG0180000568.01 | 0.819356 | 1.212281e-52 | 9.306946e-50 |
| MsG0080049011.01 | MsG0180000568.01 | 0.820390 | 7.036272e-53 | 5.560355e-50 |
| MsG0080049135.01 | MsG0180000568.01 | 0.800010 | 1.761025e-48 | 8.111108e-46 |
| MsG0180000205.01 | MsG0180000568.01 | 0.808454 | 3.073144e-50 | 1.757947e-47 |
| MsG0180000355.01 | MsG0180000568.01 | 0.802472 | 5.520735e-49 | 2.706676e-46 |
| MsG0180000568.01 | MsG0180000611.01 | 0.802088 | 6.621376e-49 | 3.214732e-46 |
| MsG0180000568.01 | MsG0180000806.01 | 0.826388 | 2.788320e-54 | 2.611340e-51 |
| MsG0180000568.01 | MsG0180000982.01 | 0.803831 | 2.888663e-49 | 1.466403e-46 |
| MsG0180000568.01 | MsG0180001118.01 | 0.806790 | 6.933025e-50 | 3.797128e-47 |
| MsG0180000568.01 | MsG0180001382.01 | 0.809519 | 1.817622e-50 | 1.069488e-47 |
| MsG0180000568.01 | MsG0180001599.01 | 0.803552 | 3.300622e-49 | 1.663613e-46 |
| MsG0180000568.01 | MsG0180001886.01 | 0.822071 | 2.881844e-53 | 2.386788e-50 |
| MsG0180000568.01 | MsG0180002547.01 | 0.837821 | 4.144426e-57 | 5.447909e-54 |
| MsG0180000568.01 | MsG0180002664.01 | 0.801593 | 8.370269e-49 | 4.012794e-46 |
| MsG0180000568.01 | MsG0180002794.01 | 0.829178 | 5.953007e-55 | 6.046751e-52 |
| MsG0180000568.01 | MsG0180003627.01 | 0.804791 | 1.823056e-49 | 9.486224e-47 |
| MsG0180000568.01 | MsG0180003793.01 | 0.822989 | 1.763558e-53 | 1.499396e-50 |
| MsG0180000568.01 | MsG0180003821.01 | 0.819834 | 9.433212e-53 | 7.339948e-50 |
| MsG0180000568.01 | MsG0180003922.01 | 0.815721 | 7.993893e-52 | 5.554705e-49 |
| MsG0180000568.01 | MsG0180003932.01 | 0.802837 | 4.642050e-49 | 2.297272e-46 |
| MsG0180000568.01 | MsG0180004016.01 | 0.818959 | 1.492962e-52 | 1.133855e-49 |
| MsG0180000568.01 | MsG0180004130.01 | 0.803772 | 2.972493e-49 | 1.506609e-46 |
| MsG0180000568.01 | MsG0180004152.01 | 0.801287 | 9.670476e-49 | 4.600708e-46 |
| MsG0180000568.01 | MsG0180004481.01 | 0.828401 | 9.175840e-55 | 9.110915e-52 |
| MsG0180000568.01 | MsG0180004482.01 | 0.825232 | 5.243192e-54 | 4.751386e-51 |
| MsG0180000568.01 | MsG0180004854.01 | 0.805432 | 1.339014e-49 | 7.082942e-47 |
| MsG0180000568.01 | MsG0180004861.01 | 0.807090 | 5.990913e-50 | 3.306666e-47 |
| MsG0180000568.01 | MsG0180004928.01 | 0.805495 | 1.298447e-49 | 6.879488e-47 |
| MsG0180000568.01 | MsG0180005169.01 | 0.802726 | 4.892447e-49 | 2.414356e-46 |
| MsG0180000568.01 | MsG0180005334.01 | 0.810808 | 9.586673e-51 | 5.836173e-48 |
| MsG0180000568.01 | MsG0180005786.01 | 0.813368 | 2.652505e-51 | 1.728939e-48 |
| MsG0180000568.01 | MsG0180005787.01 | 0.804796 | 1.819195e-49 | 9.467207e-47 |
| MsG0180000568.01 | MsG0180005913.01 | 0.829550 | 4.833600e-55 | 4.963063e-52 |
| MsG0180000568.01 | MsG0180006013.01 | 0.807850 | 4.132228e-50 | 2.326340e-47 |
| MsG0180000568.01 | MsG0180006046.01 | 0.812945 | 3.283819e-51 | 2.115902e-48 |
| MsG0180000568.01 | MsG0280006461.01 | 0.815384 | 9.504140e-52 | 6.542976e-49 |
| MsG0180000568.01 | MsG0280006678.01 | 0.809497 | 1.838204e-50 | 1.080924e-47 |
| MsG0180000568.01 | MsG0280006852.01 | 0.807821 | 4.190475e-50 | 2.357402e-47 |
| MsG0180000568.01 | MsG0280007153.01 | 0.804686 | 1.917876e-49 | 9.952058e-47 |
| MsG0180000568.01 | MsG0280007161.01 | 0.800635 | 1.313990e-48 | 6.148941e-46 |
| MsG0180000568.01 | MsG0280007441.01 | 0.800905 | 1.157324e-48 | 5.453364e-46 |
| MsG0180000568.01 | MsG0280007527.01 | 0.803794 | 2.940169e-49 | 1.491116e-46 |
| MsG0180000568.01 | MsG0280007847.01 | 0.864611 | 1.073491e-64 | 3.391496e-61 |
| MsG0180000568.01 | MsG0280007903.01 | 0.802282 | 6.041853e-49 | 2.947933e-46 |
| MsG0180000568.01 | MsG0280008429.01 | 0.843259 | 1.563813e-58 | 2.432981e-55 |
| MsG0180000568.01 | MsG0280009441.01 | 0.801268 | 9.754316e-49 | 4.638449e-46 |
| MsG0180000568.01 | MsG0280009575.01 | 0.844515 | 7.205696e-59 | 1.166188e-55 |
| MsG0180000568.01 | MsG0280010013.01 | 0.834695 | 2.583168e-56 | 3.088652e-53 |
| MsG0180000568.01 | MsG0280010205.01 | 0.818484 | 1.914096e-52 | 1.434604e-49 |
| MsG0180000568.01 | MsG0280010411.01 | 0.808662 | 2.773942e-50 | 1.595317e-47 |
| MsG0180000568.01 | MsG0280010776.01 | 0.833632 | 4.769233e-56 | 5.524168e-53 |
| MsG0180000568.01 | MsG0280011109.01 | 0.819611 | 1.060315e-52 | 8.198603e-50 |
| MsG0180000568.01 | MsG0280011371.01 | 0.844849 | 5.860516e-59 | 9.584562e-56 |
| MsG0180000568.01 | MsG0280011387.01 | 0.821825 | 3.285109e-53 | 2.702110e-50 |
| MsG0180000568.01 | MsG0380011614.01 | 0.838582 | 2.639651e-57 | 3.551300e-54 |
| MsG0180000568.01 | MsG0380011704.01 | 0.805217 | 1.484902e-49 | 7.811430e-47 |
| MsG0180000568.01 | MsG0380012570.01 | 0.842230 | 2.936201e-58 | 4.422493e-55 |
| MsG0180000568.01 | MsG0380013085.01 | 0.820332 | 7.252437e-53 | 5.721593e-50 |
| MsG0180000568.01 | MsG0380014175.01 | 0.846202 | 2.519244e-59 | 4.302831e-56 |
| MsG0180000568.01 | MsG0380014296.01 | 0.818069 | 2.375641e-52 | 1.760201e-49 |
| MsG0180000568.01 | MsG0380014885.01 | 0.802642 | 5.092585e-49 | 2.507534e-46 |
| MsG0180000568.01 | MsG0380014908.01 | 0.810860 | 9.342079e-51 | 5.695353e-48 |
| MsG0180000568.01 | MsG0380015027.01 | 0.830508 | 2.823737e-55 | 2.980927e-52 |
| MsG0180000568.01 | MsG0380015435.01 | 0.812885 | 3.384449e-51 | 2.177375e-48 |
| MsG0180000568.01 | MsG0380015818.01 | 0.837932 | 3.881354e-57 | 5.119171e-54 |
| MsG0180000568.01 | MsG0380016067.01 | 0.805927 | 1.053745e-49 | 5.645421e-47 |
| MsG0180000568.01 | MsG0380016133.01 | 0.809088 | 2.249235e-50 | 1.308328e-47 |
| MsG0180000568.01 | MsG0380016505.01 | 0.818668 | 1.738320e-52 | 1.309442e-49 |
| MsG0180000568.01 | MsG0380016513.01 | 0.804971 | 1.671717e-49 | 8.739123e-47 |
| MsG0180000568.01 | MsG0380016560.01 | 0.820800 | 5.663042e-53 | 4.526143e-50 |
| MsG0180000568.01 | MsG0380017589.01 | 0.808160 | 3.550502e-50 | 2.015377e-47 |
| MsG0180000568.01 | MsG0380018022.01 | 0.813066 | 3.089381e-51 | 1.997102e-48 |
| MsG0180000568.01 | MsG0380018033.01 | 0.830838 | 2.344051e-55 | 2.498914e-52 |
| MsG0180000568.01 | MsG0480018235.01 | 0.815786 | 7.734739e-52 | 5.384170e-49 |
| MsG0180000568.01 | MsG0480018477.01 | 0.804334 | 2.270726e-49 | 1.167661e-46 |
| MsG0180000568.01 | MsG0480018911.01 | 0.801172 | 1.020602e-48 | 4.841487e-46 |
| MsG0180000568.01 | MsG0480019148.01 | 0.817197 | 3.735843e-52 | 2.702670e-49 |
| MsG0180000568.01 | MsG0480019380.01 | 0.809930 | 1.482878e-50 | 8.820642e-48 |
| MsG0180000568.01 | MsG0480021037.01 | 0.815516 | 8.884412e-52 | 6.138707e-49 |
| MsG0180000568.01 | MsG0480021041.01 | 0.816019 | 6.862147e-52 | 4.807117e-49 |
| MsG0180000568.01 | MsG0480021056.01 | 0.802841 | 4.633512e-49 | 2.293246e-46 |
| MsG0180000568.01 | MsG0480021706.01 | 0.847604 | 1.041257e-59 | 1.860568e-56 |
| MsG0180000568.01 | MsG0480021735.01 | 0.812556 | 3.994913e-51 | 2.547990e-48 |
| MsG0180000568.01 | MsG0480021750.01 | 0.800666 | 1.295089e-48 | 6.065290e-46 |
| MsG0180000568.01 | MsG0480021994.01 | 0.826844 | 2.169834e-54 | 2.058681e-51 |
| MsG0180000568.01 | MsG0480022035.01 | 0.811702 | 6.132863e-51 | 3.822763e-48 |
| MsG0180000568.01 | MsG0480022223.01 | 0.838064 | 3.590326e-57 | 4.754220e-54 |
| MsG0180000568.01 | MsG0480022292.01 | 0.826129 | 3.213258e-54 | 2.987048e-51 |
| MsG0180000568.01 | MsG0480022493.01 | 0.814522 | 1.475755e-51 | 9.925289e-49 |
| MsG0180000568.01 | MsG0480022672.01 | 0.834185 | 3.469522e-56 | 4.085675e-53 |
| MsG0180000568.01 | MsG0480022711.01 | 0.826335 | 2.871123e-54 | 2.684680e-51 |
| MsG0180000568.01 | MsG0480022780.01 | 0.810861 | 9.337278e-51 | 5.692590e-48 |
| MsG0180000568.01 | MsG0480023055.01 | 0.821696 | 3.519395e-53 | 2.884146e-50 |
| MsG0180000568.01 | MsG0480023221.01 | 0.817444 | 3.287248e-52 | 2.394424e-49 |
| MsG0180000568.01 | MsG0480023357.01 | 0.807912 | 4.008602e-50 | 2.260350e-47 |
| MsG0180000568.01 | MsG0480023660.01 | 0.809233 | 2.093460e-50 | 1.222498e-47 |
| MsG0180000568.01 | MsG0480023814.01 | 0.802836 | 4.643997e-49 | 2.298192e-46 |
| MsG0180000568.01 | MsG0480023867.01 | 0.801753 | 7.760997e-49 | 3.735806e-46 |
| MsG0180000568.01 | MsG0480023943.01 | 0.843339 | 1.488725e-58 | 2.322319e-55 |
| MsG0180000568.01 | MsG0480023994.01 | 0.818284 | 2.123515e-52 | 1.582769e-49 |
| MsG0180000568.01 | MsG0580024084.01 | 0.827428 | 1.573435e-54 | 1.518595e-51 |
| MsG0180000568.01 | MsG0580024197.01 | 0.802978 | 4.341396e-49 | 2.155967e-46 |
| MsG0180000568.01 | MsG0580024619.01 | 0.800934 | 1.141662e-48 | 5.383417e-46 |
| MsG0180000568.01 | MsG0580024727.01 | 0.802967 | 4.363571e-49 | 2.166438e-46 |
| MsG0180000568.01 | MsG0580025268.01 | 0.814575 | 1.436707e-51 | 9.676109e-49 |
| MsG0180000568.01 | MsG0580025400.01 | 0.807372 | 5.221264e-50 | 2.903093e-47 |
| MsG0180000568.01 | MsG0580025439.01 | 0.826659 | 2.403089e-54 | 2.267896e-51 |
| MsG0180000568.01 | MsG0580025756.01 | 0.848802 | 4.858639e-60 | 9.022324e-57 |
| MsG0180000568.01 | MsG0580025986.01 | 0.804542 | 2.055173e-49 | 1.062461e-46 |
| MsG0180000568.01 | MsG0580026137.01 | 0.833089 | 6.513890e-56 | 7.424402e-53 |
| MsG0180000568.01 | MsG0580026301.01 | 0.807452 | 5.020684e-50 | 2.797530e-47 |
| MsG0180000568.01 | MsG0580026439.01 | 0.836350 | 9.853660e-57 | 1.238615e-53 |
| MsG0180000568.01 | MsG0580026485.01 | 0.815675 | 8.185392e-52 | 5.680479e-49 |
| MsG0180000568.01 | MsG0580026718.01 | 0.807609 | 4.649748e-50 | 2.601255e-47 |
| MsG0180000568.01 | MsG0580027361.01 | 0.822466 | 2.333661e-53 | 1.954840e-50 |
| MsG0180000568.01 | MsG0580028582.01 | 0.819923 | 8.999151e-53 | 7.019867e-50 |
| MsG0180000568.01 | MsG0580028597.01 | 0.812093 | 5.042382e-51 | 3.176275e-48 |
| MsG0180000568.01 | MsG0580028918.01 | 0.804175 | 2.450974e-49 | 1.255203e-46 |
| MsG0180000568.01 | MsG0580029283.01 | 0.818718 | 1.693151e-52 | 1.277211e-49 |
| MsG0180000568.01 | MsG0680030413.01 | 0.824764 | 6.764210e-54 | 6.048543e-51 |
| MsG0180000568.01 | MsG0680031000.01 | 0.860107 | 2.601090e-63 | 7.030509e-60 |
| MsG0180000568.01 | MsG0680031468.01 | 0.820782 | 5.716658e-53 | 4.566734e-50 |
| MsG0180000568.01 | MsG0680031699.01 | 0.814818 | 1.269026e-51 | 8.602818e-49 |
| MsG0180000568.01 | MsG0680032075.01 | 0.825484 | 4.571085e-54 | 4.171773e-51 |
| MsG0180000568.01 | MsG0680034913.01 | 0.810789 | 9.680651e-51 | 5.890389e-48 |
| MsG0180000568.01 | MsG0680035306.01 | 0.817933 | 2.549891e-52 | 1.882360e-49 |
| MsG0180000568.01 | MsG0680035888.01 | 0.808910 | 2.455754e-50 | 1.421563e-47 |
| MsG0180000568.01 | MsG0780035937.01 | 0.805707 | 1.171963e-49 | 6.243895e-47 |
| MsG0180000568.01 | MsG0780036186.01 | 0.823340 | 1.460157e-53 | 1.253694e-50 |
| MsG0180000568.01 | MsG0780036240.01 | 0.823523 | 1.322946e-53 | 1.141868e-50 |
| MsG0180000568.01 | MsG0780036943.01 | 0.821798 | 3.332729e-53 | 2.739115e-50 |
| MsG0180000568.01 | MsG0780037124.01 | 0.816084 | 6.634899e-52 | 4.656340e-49 |
| MsG0180000568.01 | MsG0780038400.01 | 0.834532 | 2.839181e-56 | 3.379001e-53 |
| MsG0180000568.01 | MsG0780038443.01 | 0.800645 | 1.307687e-48 | 6.121061e-46 |
| MsG0180000568.01 | MsG0780039340.01 | 0.816687 | 4.862449e-52 | 3.468941e-49 |
| MsG0180000568.01 | MsG0780039369.01 | 0.801541 | 8.575302e-49 | 4.105921e-46 |
| MsG0180000568.01 | MsG0780039943.01 | 0.802561 | 5.292889e-49 | 2.600751e-46 |
| MsG0180000568.01 | MsG0780040384.01 | 0.801595 | 8.362416e-49 | 4.009219e-46 |
| MsG0180000568.01 | MsG0780040718.01 | 0.800151 | 1.648506e-48 | 7.620117e-46 |
| MsG0180000568.01 | MsG0780040734.01 | 0.823153 | 1.614880e-53 | 1.379340e-50 |
| MsG0180000568.01 | MsG0780041137.01 | 0.840385 | 8.976822e-58 | 1.276644e-54 |
| MsG0180000568.01 | MsG0780041223.01 | 0.821288 | 4.371739e-53 | 3.541818e-50 |
| MsG0180000568.01 | MsG0780041258.01 | 0.804513 | 2.083630e-49 | 1.076347e-46 |
| MsG0180000568.01 | MsG0780041268.01 | 0.839629 | 1.413071e-57 | 1.962851e-54 |
| MsG0180000568.01 | MsG0780041435.01 | 0.823353 | 1.449746e-53 | 1.245188e-50 |
| MsG0180000568.01 | MsG0780041440.01 | 0.816742 | 4.727543e-52 | 3.377798e-49 |
| MsG0180000568.01 | MsG0780041729.01 | -0.816733 | 4.748200e-52 | 3.391776e-49 |
| MsG0180000568.01 | MsG0880042033.01 | 0.826645 | 2.420684e-54 | 2.283586e-51 |
| MsG0180000568.01 | MsG0880042108.01 | 0.809185 | 2.143497e-50 | 1.250107e-47 |
| MsG0180000568.01 | MsG0880042324.01 | 0.806618 | 7.538379e-50 | 4.110285e-47 |
| MsG0180000568.01 | MsG0880042519.01 | 0.854468 | 1.206156e-61 | 2.696410e-58 |
| MsG0180000568.01 | MsG0880043081.01 | 0.800240 | 1.581161e-48 | 7.325374e-46 |
| MsG0180000568.01 | MsG0880044728.01 | 0.809755 | 1.617775e-50 | 9.579130e-48 |
| MsG0180000568.01 | MsG0880044975.01 | 0.820039 | 8.465297e-53 | 6.625004e-50 |
| MsG0180000568.01 | MsG0880045017.01 | 0.820234 | 7.637532e-53 | 6.009065e-50 |
| MsG0180000568.01 | MsG0880045145.01 | 0.803904 | 2.789830e-49 | 1.418942e-46 |
| MsG0180000568.01 | MsG0880045362.01 | 0.802939 | 4.422081e-49 | 2.193900e-46 |
| MsG0180000568.01 | MsG0880045460.01 | 0.821475 | 3.959443e-53 | 3.224488e-50 |
| MsG0180000568.01 | MsG0880045656.01 | 0.824687 | 7.054024e-54 | 6.293960e-51 |
| MsG0180000568.01 | MsG0880045684.01 | 0.850067 | 2.157259e-60 | 4.174891e-57 |
| MsG0180000568.01 | MsG0880047038.01 | 0.808693 | 2.732653e-50 | 1.572821e-47 |
| MsG0180000568.01 | MsG0880047052.01 | 0.809498 | 1.836706e-50 | 1.080101e-47 |
| MsG0180000568.01 | MsG0880047212.01 | 0.850313 | 1.840767e-60 | 3.591118e-57 |
| MsG0180000568.01 | MsG0880047427.01 | 0.820731 | 5.874162e-53 | 4.685690e-50 |
| MsG0180000568.01 | MsG0880047428.01 | 0.819394 | 1.188281e-52 | 9.132579e-50 |
| MsG0180000568.01 | MsG0880047696.01 | 0.810153 | 1.327746e-50 | 7.943894e-48 |
| MsG0180000568.01 | MsG0880047764.01 | 0.812191 | 4.800602e-51 | 3.032141e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000568.01.T01 | MTR_1g013120 | 77.841 | 176 | 5 | 1 | 1 | 142 | 1 | 176 | 5.77e-91 | 266 |
| MsG0180000568.01.T01 | MTR_3g007690 | 63.889 | 72 | 13 | 2 | 1 | 71 | 1 | 60 | 2.67e-20 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000568.01.T01 | AT4G31930 | 41.011 | 178 | 68 | 3 | 1 | 142 | 1 | 177 | 6.30e-38 | 130 |
| MsG0180000568.01.T01 | AT1G80720 | 32.927 | 164 | 63 | 6 | 10 | 134 | 20 | 175 | 6.94e-19 | 81.6 |
Find 53 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTACCTGGACCTGATTTC+AGG | 0.120508 | 1:-7969285 | MsG0180000568.01.T01:intron |
| CAAAACTTCTCCTGAATCTT+AGG | 0.262004 | 1:+7967859 | None:intergenic |
| GTTGGATTCAAATGGAGATT+TGG | 0.300681 | 1:+7969901 | None:intergenic |
| GAGAGAACATTACTGATTCT+AGG | 0.315397 | 1:+7969971 | None:intergenic |
| ACGATGAATGAATGATAAAA+AGG | 0.332773 | 1:-7967513 | MsG0180000568.01.T01:three_prime_UTR |
| AGGATAGAATTGAACTTCTA+AGG | 0.343544 | 1:-7967770 | MsG0180000568.01.T01:three_prime_UTR |
| CTCAGCGTGGCCTGATAGTT+TGG | 0.345831 | 1:-7969355 | MsG0180000568.01.T01:CDS |
| TGCTAACACTACAAATCAAA+TGG | 0.360244 | 1:+7967633 | None:intergenic |
| GAATCTGAAGCCTAAGATTC+AGG | 0.365605 | 1:-7967869 | MsG0180000568.01.T01:three_prime_UTR |
| CGCAAAATGTTGGATTCAAA+TGG | 0.377903 | 1:+7969893 | None:intergenic |
| GCATATGGAGATGATAGTTC+AGG | 0.394315 | 1:-7969456 | MsG0180000568.01.T01:intron |
| CCGTAAGAATGTTAAGCATT+AGG | 0.404340 | 1:-7967583 | MsG0180000568.01.T01:three_prime_UTR |
| TTCTGAACATCCAAACTATC+AGG | 0.406918 | 1:+7969345 | None:intergenic |
| CATAATTCAAACCTGAAATC+AGG | 0.448439 | 1:+7969274 | None:intergenic |
| TGAATACGCTCCTCCTCATC+AGG | 0.457720 | 1:-7969840 | MsG0180000568.01.T01:intron |
| CCTAATGCTTAACATTCTTA+CGG | 0.462342 | 1:+7967583 | None:intergenic |
| AATGTTCTCTCTCAAACCTC+AGG | 0.465355 | 1:-7969959 | MsG0180000568.01.T01:CDS |
| ACGGAGAATTCGCAAAATGT+TGG | 0.477227 | 1:+7969883 | None:intergenic |
| GATGTCGACTAGGCCTTACC+TGG | 0.480589 | 1:-7969298 | MsG0180000568.01.T01:CDS |
| TCTTCATCTCAGTTTGATTG+TGG | 0.483776 | 1:-7969421 | MsG0180000568.01.T01:CDS |
| CACAATTGCAGCTACATCAA+TGG | 0.491050 | 1:+7969089 | None:intergenic |
| GCTAACACTACAAATCAAAT+GGG | 0.498261 | 1:+7967634 | None:intergenic |
| CTTGATACTCGATTTCGTTA+CGG | 0.514717 | 1:+7969864 | None:intergenic |
| TGTTAAGCATTAGGAGGCAA+GGG | 0.528526 | 1:-7967574 | MsG0180000568.01.T01:three_prime_UTR |
| TGATTGTGGATATATCGAAA+GGG | 0.531126 | 1:-7969407 | MsG0180000568.01.T01:CDS |
| TATTGATGCGTTAAGAGTTG+TGG | 0.533840 | 1:-7969118 | MsG0180000568.01.T01:CDS |
| ATTCCTACAATGGTAAAACT+TGG | 0.542661 | 1:+7967675 | None:intergenic |
| CATATGGAGATGATAGTTCA+GGG | 0.543217 | 1:-7969455 | MsG0180000568.01.T01:intron |
| AACGATTTGAATTCTGTCAC+AGG | 0.543255 | 1:+7969587 | None:intergenic |
| TTGATTGTGGATATATCGAA+AGG | 0.546720 | 1:-7969408 | MsG0180000568.01.T01:CDS |
| CCTGAAATCAGGTCCAGGTA+AGG | 0.559053 | 1:+7969285 | None:intergenic |
| ATGTTAAGCATTAGGAGGCA+AGG | 0.560179 | 1:-7967575 | MsG0180000568.01.T01:three_prime_UTR |
| AATTGAACTTCTAAGGTGGA+TGG | 0.561187 | 1:-7967763 | MsG0180000568.01.T01:three_prime_UTR |
| TTGCGAGTACTTGGACGCAA+GGG | 0.561929 | 1:-7967839 | MsG0180000568.01.T01:three_prime_UTR |
| TCAAACCTGAAATCAGGTCC+AGG | 0.566699 | 1:+7969280 | None:intergenic |
| GATTGTGGATATATCGAAAG+GGG | 0.572237 | 1:-7969406 | MsG0180000568.01.T01:CDS |
| GAAGAAACTAATTCCTACAA+TGG | 0.594842 | 1:+7967665 | None:intergenic |
| GATATATCGAAAGGGGAAGG+TGG | 0.596404 | 1:-7969399 | MsG0180000568.01.T01:CDS |
| AGAATAGTGGGAACCTGATG+AGG | 0.597183 | 1:+7969827 | None:intergenic |
| TTTGCGAGTACTTGGACGCA+AGG | 0.601738 | 1:-7967840 | MsG0180000568.01.T01:three_prime_UTR |
| ATAGAATTGAACTTCTAAGG+TGG | 0.601785 | 1:-7967767 | MsG0180000568.01.T01:three_prime_UTR |
| TGCGAGTACTTGGACGCAAG+GGG | 0.604395 | 1:-7967838 | MsG0180000568.01.T01:three_prime_UTR |
| CATTGATGTAGCTGCAATTG+TGG | 0.608396 | 1:-7969088 | MsG0180000568.01.T01:CDS |
| TAAGAATGTTAAGCATTAGG+AGG | 0.614195 | 1:-7967580 | MsG0180000568.01.T01:three_prime_UTR |
| TTTATTGTTGAAGAGAGACC+TGG | 0.619462 | 1:-7969566 | MsG0180000568.01.T01:intron |
| GTAGCTGCAATTGTGGTCGC+AGG | 0.622424 | 1:-7969081 | MsG0180000568.01.T01:CDS |
| GTGGATATATCGAAAGGGGA+AGG | 0.628718 | 1:-7969402 | MsG0180000568.01.T01:CDS |
| ATAGTGGGAACCTGATGAGG+AGG | 0.642607 | 1:+7969830 | None:intergenic |
| TAGAATTTGTCTGCTCAGCG+TGG | 0.646106 | 1:-7969368 | MsG0180000568.01.T01:CDS |
| AGCGAGGGAAGATGTCGACT+AGG | 0.671718 | 1:-7969308 | MsG0180000568.01.T01:CDS |
| AGCTCTGTTACTGAAACCTG+AGG | 0.676912 | 1:+7969943 | None:intergenic |
| ATATGGAGATGATAGTTCAG+GGG | 0.730665 | 1:-7969454 | MsG0180000568.01.T01:intron |
| TTACACGTATATGATGAACA+AGG | 0.731200 | 1:-7967790 | MsG0180000568.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAAAGGTTAAAAT+TGG | - | Chr1:7969148-7969167 | MsG0180000568.01.T01:CDS | 10.0% |
| !! | ATAAATATAAAATGACATAA+AGG | - | Chr1:7968752-7968771 | MsG0180000568.01.T01:intron | 10.0% |
| !! | ATTATTTATCATATGAATTA+AGG | - | Chr1:7968973-7968992 | MsG0180000568.01.T01:intron | 10.0% |
| !!! | AAATCTAAATCAAAAAATTT+TGG | + | Chr1:7969528-7969547 | None:intergenic | 10.0% |
| !!! | CTTATTAAAATTAAAAGTTT+TGG | - | Chr1:7968707-7968726 | MsG0180000568.01.T01:intron | 10.0% |
| !!! | TGAGTAAAAAATAATTTTTT+TGG | - | Chr1:7967859-7967878 | MsG0180000568.01.T01:three_prime_UTR | 10.0% |
| !!! | AAAAATAATTTTTTTGGAAG+TGG | - | Chr1:7967865-7967884 | MsG0180000568.01.T01:three_prime_UTR | 15.0% |
| !!! | AAAATAATTTTTTTGGAAGT+GGG | - | Chr1:7967866-7967885 | MsG0180000568.01.T01:three_prime_UTR | 15.0% |
| !!! | ATTTGATCAATTTTGTTATT+AGG | - | Chr1:7967749-7967768 | MsG0180000568.01.T01:three_prime_UTR | 15.0% |
| !!! | TTTGATCAATTTTGTTATTA+GGG | - | Chr1:7967750-7967769 | MsG0180000568.01.T01:three_prime_UTR | 15.0% |
| !! | AACATTTCAACTTTATTCAT+TGG | - | Chr1:7969502-7969521 | MsG0180000568.01.T01:intron | 20.0% |
| !! | ATTTCATCTGTTTAAATTGT+TGG | - | Chr1:7969638-7969657 | MsG0180000568.01.T01:intron | 20.0% |
| !! | TGAATAAAGTTGAAATGTTT+AGG | + | Chr1:7969501-7969520 | None:intergenic | 20.0% |
| !! | TTAATAAAATGTCATGTGTT+TGG | + | Chr1:7969259-7969278 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCATGTAGAATAG+TGG | + | Chr1:7967725-7967744 | None:intergenic | 20.0% |
| !!! | TTTAAAACTTTGATAGCTTA+AGG | - | Chr1:7968521-7968540 | MsG0180000568.01.T01:intron | 20.0% |
| !!! | TTTTTTTCATGTAGAATAGT+GGG | + | Chr1:7967724-7967743 | None:intergenic | 20.0% |
| ! | ACGATGAATGAATGATAAAA+AGG | - | Chr1:7970023-7970042 | MsG0180000568.01.T01:CDS | 25.0% |
| ! | ATATCACAATGTGATTGTTA+TGG | + | Chr1:7968345-7968364 | None:intergenic | 25.0% |
| ! | TTATCATATGAATTAAGGCA+AGG | - | Chr1:7968978-7968997 | MsG0180000568.01.T01:intron | 25.0% |
| !! | AAAAAAGAGTACAGTACTAA+CGG | - | Chr1:7969029-7969048 | MsG0180000568.01.T01:intron | 25.0% |
| !! | CAATTTTACTTACAAAAGCA+CGG | + | Chr1:7969451-7969470 | None:intergenic | 25.0% |
| !! | CACATTGTGATATTTTATAG+TGG | - | Chr1:7968352-7968371 | MsG0180000568.01.T01:intron | 25.0% |
| !!! | TCTTGTTTTTTGTTTTGAAG+AGG | - | Chr1:7969069-7969088 | MsG0180000568.01.T01:CDS | 25.0% |
| AATTGAAGCTACATGTTTGA+TGG | - | Chr1:7968041-7968060 | MsG0180000568.01.T01:intron | 30.0% | |
| AGGATAGAATTGAACTTCTA+AGG | - | Chr1:7969766-7969785 | MsG0180000568.01.T01:intron | 30.0% | |
| ATTCCTACAATGGTAAAACT+TGG | + | Chr1:7969864-7969883 | None:intergenic | 30.0% | |
| ATTGAAGCTACATGTTTGAT+GGG | - | Chr1:7968042-7968061 | MsG0180000568.01.T01:intron | 30.0% | |
| CATAATTCAAACCTGAAATC+AGG | + | Chr1:7968265-7968284 | None:intergenic | 30.0% | |
| CCAAACAACAAATGTACAAT+AGG | + | Chr1:7968301-7968320 | None:intergenic | 30.0% | |
| CCTAATGCTTAACATTCTTA+CGG | + | Chr1:7969956-7969975 | None:intergenic | 30.0% | |
| GAAGAAACTAATTCCTACAA+TGG | + | Chr1:7969874-7969893 | None:intergenic | 30.0% | |
| GCTAACACTACAAATCAAAT+GGG | + | Chr1:7969905-7969924 | None:intergenic | 30.0% | |
| TAAGAATGTTAAGCATTAGG+AGG | - | Chr1:7969956-7969975 | MsG0180000568.01.T01:CDS | 30.0% | |
| TGATTGTGGATATATCGAAA+GGG | - | Chr1:7968129-7968148 | MsG0180000568.01.T01:intron | 30.0% | |
| TGCTAACACTACAAATCAAA+TGG | + | Chr1:7969906-7969925 | None:intergenic | 30.0% | |
| TTACACGTATATGATGAACA+AGG | - | Chr1:7969746-7969765 | MsG0180000568.01.T01:intron | 30.0% | |
| TTCATTACTAAGTGTGTGTT+TGG | - | Chr1:7968588-7968607 | MsG0180000568.01.T01:intron | 30.0% | |
| TTGATTGTGGATATATCGAA+AGG | - | Chr1:7968128-7968147 | MsG0180000568.01.T01:intron | 30.0% | |
| ! | AAAGTTTTCATGTTAAAGCG+AGG | - | Chr1:7968212-7968231 | MsG0180000568.01.T01:intron | 30.0% |
| ! | AAGTTTTCATGTTAAAGCGA+GGG | - | Chr1:7968213-7968232 | MsG0180000568.01.T01:intron | 30.0% |
| ! | ATAGAATTGAACTTCTAAGG+TGG | - | Chr1:7969769-7969788 | MsG0180000568.01.T01:intron | 30.0% |
| ! | CAAGTCTTTTGTGGAAAAAT+AGG | - | Chr1:7969803-7969822 | MsG0180000568.01.T01:intron | 30.0% |
| ! | CATTGCAAAACTTTTATCGA+AGG | - | Chr1:7969572-7969591 | MsG0180000568.01.T01:CDS | 30.0% |
| ! | TGAAATGTTTAGGATCTGTT+AGG | + | Chr1:7969491-7969510 | None:intergenic | 30.0% |
| !! | ATTGTACATTTGTTGTTTGG+TGG | - | Chr1:7968301-7968320 | MsG0180000568.01.T01:intron | 30.0% |
| !! | CCTATTGTACATTTGTTGTT+TGG | - | Chr1:7968298-7968317 | MsG0180000568.01.T01:intron | 30.0% |
| !! | CTAACTTGCTTCAATAGTTA+TGG | - | Chr1:7968935-7968954 | MsG0180000568.01.T01:intron | 30.0% |
| !! | TTTTTGGAAGTGGGTAATTT+CGG | - | Chr1:7967875-7967894 | MsG0180000568.01.T01:intron | 30.0% |
| AACAAATGTACAATAGGCAC+AGG | + | Chr1:7968295-7968314 | None:intergenic | 35.0% | |
| AACGATTTGAATTCTGTCAC+AGG | + | Chr1:7967952-7967971 | None:intergenic | 35.0% | |
| AACTACGCAAAGACTGAATT+TGG | - | Chr1:7969549-7969568 | MsG0180000568.01.T01:intron | 35.0% | |
| ATATGGAGATGATAGTTCAG+GGG | - | Chr1:7968082-7968101 | MsG0180000568.01.T01:intron | 35.0% | |
| CAAAACTTCTCCTGAATCTT+AGG | + | Chr1:7969680-7969699 | None:intergenic | 35.0% | |
| CAGTAACCAAAGTGAAAACA+AGG | + | Chr1:7969355-7969374 | None:intergenic | 35.0% | |
| CATATGGAGATGATAGTTCA+GGG | - | Chr1:7968081-7968100 | MsG0180000568.01.T01:intron | 35.0% | |
| CCGTAAGAATGTTAAGCATT+AGG | - | Chr1:7969953-7969972 | MsG0180000568.01.T01:CDS | 35.0% | |
| CGCAAAATGTTGGATTCAAA+TGG | + | Chr1:7967646-7967665 | None:intergenic | 35.0% | |
| CTTGATACTCGATTTCGTTA+CGG | + | Chr1:7967675-7967694 | None:intergenic | 35.0% | |
| GAAAAATAGGCTGGTAAGTT+TGG | - | Chr1:7969816-7969835 | MsG0180000568.01.T01:intron | 35.0% | |
| GATTGTGGATATATCGAAAG+GGG | - | Chr1:7968130-7968149 | MsG0180000568.01.T01:intron | 35.0% | |
| GTTGGATTCAAATGGAGATT+TGG | + | Chr1:7967638-7967657 | None:intergenic | 35.0% | |
| TATTGATGCGTTAAGAGTTG+TGG | - | Chr1:7968418-7968437 | MsG0180000568.01.T01:intron | 35.0% | |
| TCTTCATCTCAGTTTGATTG+TGG | - | Chr1:7968115-7968134 | MsG0180000568.01.T01:intron | 35.0% | |
| TGGGTGGTTATATTGAAAAG+CGG | - | Chr1:7969096-7969115 | MsG0180000568.01.T01:CDS | 35.0% | |
| TTCTGAACATCCAAACTATC+AGG | + | Chr1:7968194-7968213 | None:intergenic | 35.0% | |
| TTTATTGTTGAAGAGAGACC+TGG | - | Chr1:7967970-7967989 | MsG0180000568.01.T01:intron | 35.0% | |
| TTTGAACATGTTCCTGCATA+TGG | - | Chr1:7968065-7968084 | MsG0180000568.01.T01:intron | 35.0% | |
| ! | AACTCTCTGTTTTCGTACAT+GGG | - | Chr1:7969997-7970016 | MsG0180000568.01.T01:CDS | 35.0% |
| ! | ACACCAAGTTTTACCATTGT+AGG | - | Chr1:7969858-7969877 | MsG0180000568.01.T01:CDS | 35.0% |
| ! | CTGTTTAAATTGTTGGTTGC+AGG | - | Chr1:7969645-7969664 | MsG0180000568.01.T01:intron | 35.0% |
| ! | TAAGCTAGCTTATAGCTTGT+TGG | + | Chr1:7969301-7969320 | None:intergenic | 35.0% |
| ! | TCTTTTGTGGAAAAATAGGC+TGG | - | Chr1:7969807-7969826 | MsG0180000568.01.T01:intron | 35.0% |
| ! | TGATAGCTTAAGGATTTGCT+TGG | - | Chr1:7968531-7968550 | MsG0180000568.01.T01:intron | 35.0% |
| !! | AATTGAACTTCTAAGGTGGA+TGG | - | Chr1:7969773-7969792 | MsG0180000568.01.T01:intron | 35.0% |
| !! | GAGAGAACATTACTGATTCT+AGG | + | Chr1:7967568-7967587 | None:intergenic | 35.0% |
| !! | GTAATTTCGGGTTAGTGATT+TGG | - | Chr1:7967888-7967907 | MsG0180000568.01.T01:intron | 35.0% |
| !! | TTTTGGAAGTGGGTAATTTC+GGG | - | Chr1:7967876-7967895 | MsG0180000568.01.T01:intron | 35.0% |
| !!! | TGAAAACAAGGTGTCGTTTT+AGG | + | Chr1:7969343-7969362 | None:intergenic | 35.0% |
| !!! | TTTGTTTTGAAGAGGAACGT+GGG | - | Chr1:7969077-7969096 | MsG0180000568.01.T01:CDS | 35.0% |
| !!! | TTTTGTTTTGAAGAGGAACG+TGG | - | Chr1:7969076-7969095 | MsG0180000568.01.T01:CDS | 35.0% |
| AATGTTCTCTCTCAAACCTC+AGG | - | Chr1:7967577-7967596 | MsG0180000568.01.T01:three_prime_UTR | 40.0% | |
| ACGGAGAATTCGCAAAATGT+TGG | + | Chr1:7967656-7967675 | None:intergenic | 40.0% | |
| ATGTTAAGCATTAGGAGGCA+AGG | - | Chr1:7969961-7969980 | MsG0180000568.01.T01:CDS | 40.0% | |
| CACAATTGCAGCTACATCAA+TGG | + | Chr1:7968450-7968469 | None:intergenic | 40.0% | |
| CATTGATGTAGCTGCAATTG+TGG | - | Chr1:7968448-7968467 | MsG0180000568.01.T01:intron | 40.0% | |
| GAACTATCATCTCCATATGC+AGG | + | Chr1:7968080-7968099 | None:intergenic | 40.0% | |
| GCATATGGAGATGATAGTTC+AGG | - | Chr1:7968080-7968099 | MsG0180000568.01.T01:intron | 40.0% | |
| GTTACGATGAAGGGGAAATT+TGG | - | Chr1:7968002-7968021 | MsG0180000568.01.T01:intron | 40.0% | |
| TGTTAAGCATTAGGAGGCAA+GGG | - | Chr1:7969962-7969981 | MsG0180000568.01.T01:CDS | 40.0% | |
| ! | GAACTCTCTGTTTTCGTACA+TGG | - | Chr1:7969996-7970015 | MsG0180000568.01.T01:CDS | 40.0% |
| ! | GAATCTGAAGCCTAAGATTC+AGG | - | Chr1:7969667-7969686 | MsG0180000568.01.T01:intron | 40.0% |
| ! | GGATAGTCTCAAGTCTTTTG+TGG | - | Chr1:7969794-7969813 | MsG0180000568.01.T01:intron | 40.0% |
| !!! | ACGACACCTTGTTTTCACTT+TGG | - | Chr1:7969346-7969365 | MsG0180000568.01.T01:CDS | 40.0% |
| AGCTCTGTTACTGAAACCTG+AGG | + | Chr1:7967596-7967615 | None:intergenic | 45.0% | |
| CGACTTTGCAGTCATAGTCA+AGG | - | Chr1:7968492-7968511 | MsG0180000568.01.T01:intron | 45.0% | |
| CTGAATGCCTTCAAACGACT+AGG | + | Chr1:7969598-7969617 | None:intergenic | 45.0% | |
| GATATATCGAAAGGGGAAGG+TGG | - | Chr1:7968137-7968156 | MsG0180000568.01.T01:intron | 45.0% | |
| GTGGATATATCGAAAGGGGA+AGG | - | Chr1:7968134-7968153 | MsG0180000568.01.T01:intron | 45.0% | |
| TAGAATTTGTCTGCTCAGCG+TGG | - | Chr1:7968168-7968187 | MsG0180000568.01.T01:intron | 45.0% | |
| TCAAACCTGAAATCAGGTCC+AGG | + | Chr1:7968259-7968278 | None:intergenic | 45.0% | |
| TGAGCAGTGGTTACGATGAA+GGG | - | Chr1:7967993-7968012 | MsG0180000568.01.T01:intron | 45.0% | |
| ! | AGAATAGTGGGAACCTGATG+AGG | + | Chr1:7967712-7967731 | None:intergenic | 45.0% |
| ! | GGAGAAGTTTTGCGAGTACT+TGG | - | Chr1:7969688-7969707 | MsG0180000568.01.T01:intron | 45.0% |
| !! | AGTCGTTTGAAGGCATTCAG+TGG | - | Chr1:7969598-7969617 | MsG0180000568.01.T01:intron | 45.0% |
| !!! | GTGTCGTTTTAGGCTGTGTT+TGG | + | Chr1:7969333-7969352 | None:intergenic | 45.0% |
| !! | AACAATAAATAAAATAATAA+AGG | - | Chr1:7969138-7969157 | MsG0180000568.01.T01:CDS | 5.0% |
| CCTGAAATCAGGTCCAGGTA+AGG | + | Chr1:7968254-7968273 | None:intergenic | 50.0% | |
| CCTTACCTGGACCTGATTTC+AGG | - | Chr1:7968251-7968270 | MsG0180000568.01.T01:intron | 50.0% | |
| GAGCAGTGGTTACGATGAAG+GGG | - | Chr1:7967994-7968013 | MsG0180000568.01.T01:intron | 50.0% | |
| GTGAGCAGTGGTTACGATGA+AGG | - | Chr1:7967992-7968011 | MsG0180000568.01.T01:intron | 50.0% | |
| TCGAAGGCCTAGTCGTTTGA+AGG | - | Chr1:7969588-7969607 | MsG0180000568.01.T01:CDS | 50.0% | |
| TGAATACGCTCCTCCTCATC+AGG | - | Chr1:7967696-7967715 | MsG0180000568.01.T01:three_prime_UTR | 50.0% | |
| TTGCGAGTACTTGGACGCAA+GGG | - | Chr1:7969697-7969716 | MsG0180000568.01.T01:intron | 50.0% | |
| TTTGCGAGTACTTGGACGCA+AGG | - | Chr1:7969696-7969715 | MsG0180000568.01.T01:intron | 50.0% | |
| ! | ATAGTGGGAACCTGATGAGG+AGG | + | Chr1:7967709-7967728 | None:intergenic | 50.0% |
| !!! | GTTTTGAAGAGGAACGTGGG+TGG | - | Chr1:7969080-7969099 | MsG0180000568.01.T01:CDS | 50.0% |
| AAGAGAGACCTGGTGAGCAG+TGG | - | Chr1:7967980-7967999 | MsG0180000568.01.T01:intron | 55.0% | |
| CATCGTAACCACTGCTCACC+AGG | + | Chr1:7967991-7968010 | None:intergenic | 55.0% | |
| CTCAGCGTGGCCTGATAGTT+TGG | - | Chr1:7968181-7968200 | MsG0180000568.01.T01:intron | 55.0% | |
| GTAGCTGCAATTGTGGTCGC+AGG | - | Chr1:7968455-7968474 | MsG0180000568.01.T01:intron | 55.0% | |
| TGCGAGTACTTGGACGCAAG+GGG | - | Chr1:7969698-7969717 | MsG0180000568.01.T01:intron | 55.0% | |
| ! | AGCGAGGGAAGATGTCGACT+AGG | - | Chr1:7968228-7968247 | MsG0180000568.01.T01:intron | 55.0% |
| ! | GATGTCGACTAGGCCTTACC+TGG | - | Chr1:7968238-7968257 | MsG0180000568.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 7967505 | 7970053 | 7967505 | ID=MsG0180000568.01;Name=MsG0180000568.01 |
| Chr1 | mRNA | 7967505 | 7970053 | 7967505 | ID=MsG0180000568.01.T01;Parent=MsG0180000568.01;Name=MsG0180000568.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0.25|0.2|0.8|1|1|5|386|191 |
| Chr1 | exon | 7969841 | 7970053 | 7969841 | ID=MsG0180000568.01.T01:exon:2682;Parent=MsG0180000568.01.T01 |
| Chr1 | exon | 7969567 | 7969609 | 7969567 | ID=MsG0180000568.01.T01:exon:2683;Parent=MsG0180000568.01.T01 |
| Chr1 | exon | 7969286 | 7969468 | 7969286 | ID=MsG0180000568.01.T01:exon:2684;Parent=MsG0180000568.01.T01 |
| Chr1 | exon | 7969051 | 7969186 | 7969051 | ID=MsG0180000568.01.T01:exon:2685;Parent=MsG0180000568.01.T01 |
| Chr1 | exon | 7967505 | 7967891 | 7967505 | ID=MsG0180000568.01.T01:exon:2686;Parent=MsG0180000568.01.T01 |
| Chr1 | CDS | 7969841 | 7970053 | 7969841 | ID=MsG0180000568.01.T01:cds;Parent=MsG0180000568.01.T01 |
| Chr1 | CDS | 7969567 | 7969609 | 7969567 | ID=MsG0180000568.01.T01:cds;Parent=MsG0180000568.01.T01 |
| Chr1 | CDS | 7969286 | 7969468 | 7969286 | ID=MsG0180000568.01.T01:cds;Parent=MsG0180000568.01.T01 |
| Chr1 | CDS | 7969051 | 7969186 | 7969051 | ID=MsG0180000568.01.T01:cds;Parent=MsG0180000568.01.T01 |
| Chr1 | CDS | 7967891 | 7967891 | 7967891 | ID=MsG0180000568.01.T01:cds;Parent=MsG0180000568.01.T01 |
| Chr1 | three_prime_UTR | 7967505 | 7967890 | 7967505 | ID=MsG0180000568.01.T01:three_prime_utr;Parent=MsG0180000568.01.T01 |
| Gene Sequence |
| Protein sequence |
