Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016134.01.T01 | XP_003601667.1 | 95.652 | 92 | 4 | 0 | 1 | 92 | 1 | 92 | 6.97E-60 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016134.01.T01 | P33080 | 72.826 | 92 | 25 | 0 | 1 | 92 | 1 | 92 | 4.34E-48 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016134.01.T01 | G7JAQ1 | 95.652 | 92 | 4 | 0 | 1 | 92 | 1 | 92 | 3.33e-60 | 187 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0380016134.01 | 0.811457 | 6.934990e-51 | 4.295079e-48 |
| MsG0080048780.01 | MsG0380016134.01 | 0.803652 | 3.147178e-49 | 1.590224e-46 |
| MsG0080048876.01 | MsG0380016134.01 | 0.806532 | 7.858672e-50 | 4.275702e-47 |
| MsG0080049039.01 | MsG0380016134.01 | 0.803757 | 2.993291e-49 | 1.516602e-46 |
| MsG0080049040.01 | MsG0380016134.01 | 0.829916 | 3.938148e-55 | 4.087284e-52 |
| MsG0080049063.01 | MsG0380016134.01 | 0.807659 | 4.537129e-50 | 2.541587e-47 |
| MsG0080049068.01 | MsG0380016134.01 | 0.824579 | 7.478219e-54 | 6.651376e-51 |
| MsG0180000671.01 | MsG0380016134.01 | 0.826641 | 2.426668e-54 | 2.288970e-51 |
| MsG0180000677.01 | MsG0380016134.01 | 0.828814 | 7.293983e-55 | 7.329242e-52 |
| MsG0180000678.01 | MsG0380016134.01 | 0.802312 | 5.956686e-49 | 2.908686e-46 |
| MsG0180000878.01 | MsG0380016134.01 | 0.813799 | 2.131674e-51 | 1.405760e-48 |
| MsG0180001085.01 | MsG0380016134.01 | 0.818910 | 1.531755e-52 | 1.161725e-49 |
| MsG0180001175.01 | MsG0380016134.01 | 0.827031 | 1.957997e-54 | 1.867846e-51 |
| MsG0180001270.01 | MsG0380016134.01 | 0.840762 | 7.151268e-58 | 1.028951e-54 |
| MsG0180001371.01 | MsG0380016134.01 | 0.811977 | 5.343596e-51 | 3.355406e-48 |
| MsG0180003906.01 | MsG0380016134.01 | 0.816569 | 5.168413e-52 | 3.675414e-49 |
| MsG0180004103.01 | MsG0380016134.01 | 0.802579 | 5.246728e-49 | 2.579313e-46 |
| MsG0180004542.01 | MsG0380016134.01 | 0.828001 | 1.145832e-54 | 1.124537e-51 |
| MsG0180004733.01 | MsG0380016134.01 | 0.822247 | 2.622931e-53 | 2.183482e-50 |
| MsG0180004735.01 | MsG0380016134.01 | 0.815537 | 8.785802e-52 | 6.073973e-49 |
| MsG0180005039.01 | MsG0380016134.01 | 0.812434 | 4.248835e-51 | 2.701360e-48 |
| MsG0180005349.01 | MsG0380016134.01 | 0.803316 | 3.694760e-49 | 1.850843e-46 |
| MsG0180005755.01 | MsG0380016134.01 | 0.819596 | 1.068826e-52 | 8.261264e-50 |
| MsG0180005807.01 | MsG0380016134.01 | 0.806786 | 6.947407e-50 | 3.804570e-47 |
| MsG0180005961.01 | MsG0380016134.01 | 0.812735 | 3.650195e-51 | 2.339134e-48 |
| MsG0280010569.01 | MsG0380016134.01 | 0.812915 | 3.333804e-51 | 2.146428e-48 |
| MsG0280010926.01 | MsG0380016134.01 | 0.822263 | 2.601587e-53 | 2.166669e-50 |
| MsG0280010975.01 | MsG0380016134.01 | 0.823711 | 1.195810e-53 | 1.037769e-50 |
| MsG0280011252.01 | MsG0380016134.01 | 0.800803 | 1.214021e-48 | 5.705370e-46 |
| MsG0280011411.01 | MsG0380016134.01 | 0.803543 | 3.315304e-49 | 1.670603e-46 |
| MsG0380013530.01 | MsG0380016134.01 | 0.800750 | 1.244570e-48 | 5.841062e-46 |
| MsG0380014940.01 | MsG0380016134.01 | 0.819651 | 1.038275e-52 | 8.037508e-50 |
| MsG0380015603.01 | MsG0380016134.01 | 0.857619 | 1.443038e-62 | 3.583532e-59 |
| MsG0380015693.01 | MsG0380016134.01 | 0.808301 | 3.311811e-50 | 1.886848e-47 |
| MsG0380015896.01 | MsG0380016134.01 | 0.817276 | 3.586553e-52 | 2.600215e-49 |
| MsG0380016134.01 | MsG0380016135.01 | 0.826255 | 2.998895e-54 | 2.797799e-51 |
| MsG0380016134.01 | MsG0380016137.01 | 0.870789 | 1.118743e-66 | 4.407106e-63 |
| MsG0380016134.01 | MsG0380016192.01 | 0.814539 | 1.463548e-51 | 9.847192e-49 |
| MsG0380016134.01 | MsG0380016284.01 | 0.809950 | 1.468697e-50 | 8.740744e-48 |
| MsG0380016134.01 | MsG0380016836.01 | 0.800697 | 1.276284e-48 | 5.981716e-46 |
| MsG0380016134.01 | MsG0380017087.01 | 0.805347 | 1.394836e-49 | 7.362142e-47 |
| MsG0380016134.01 | MsG0380017088.01 | 0.810968 | 8.853139e-51 | 5.413044e-48 |
| MsG0380016134.01 | MsG0380017423.01 | 0.812761 | 3.602699e-51 | 2.310193e-48 |
| MsG0380016134.01 | MsG0380017703.01 | 0.831182 | 1.930146e-55 | 2.078564e-52 |
| MsG0380016134.01 | MsG0380017728.01 | 0.803359 | 3.619665e-49 | 1.815186e-46 |
| MsG0380016134.01 | MsG0380018027.01 | 0.833381 | 5.509283e-56 | 6.334233e-53 |
| MsG0380016134.01 | MsG0380018037.01 | 0.805880 | 1.078060e-49 | 5.768792e-47 |
| MsG0380016134.01 | MsG0380018069.01 | 0.819878 | 9.214995e-53 | 7.179004e-50 |
| MsG0380016134.01 | MsG0480019340.01 | 0.803519 | 3.353861e-49 | 1.688961e-46 |
| MsG0380016134.01 | MsG0480019641.01 | 0.803416 | 3.522995e-49 | 1.769378e-46 |
| MsG0380016134.01 | MsG0480019751.01 | 0.806744 | 7.089315e-50 | 3.878158e-47 |
| MsG0380016134.01 | MsG0480019956.01 | 0.813414 | 2.590334e-51 | 1.690566e-48 |
| MsG0380016134.01 | MsG0480019971.01 | 0.824982 | 6.009482e-54 | 5.407172e-51 |
| MsG0380016134.01 | MsG0480020408.01 | 0.860248 | 2.357787e-63 | 6.402872e-60 |
| MsG0380016134.01 | MsG0480020690.01 | 0.826493 | 2.632077e-54 | 2.472124e-51 |
| MsG0380016134.01 | MsG0480020753.01 | 0.830565 | 2.734095e-55 | 2.891192e-52 |
| MsG0380016134.01 | MsG0480020783.01 | 0.806658 | 7.393022e-50 | 4.035090e-47 |
| MsG0380016134.01 | MsG0480020890.01 | 0.801638 | 8.192048e-49 | 3.931956e-46 |
| MsG0380016134.01 | MsG0480021254.01 | 0.808559 | 2.918661e-50 | 1.674057e-47 |
| MsG0380016134.01 | MsG0480021303.01 | 0.827690 | 1.361379e-54 | 1.323838e-51 |
| MsG0380016134.01 | MsG0480021337.01 | 0.819847 | 9.367537e-53 | 7.291392e-50 |
| MsG0380016134.01 | MsG0480021682.01 | 0.808080 | 3.692702e-50 | 2.091558e-47 |
| MsG0380016134.01 | MsG0480021783.01 | 0.817226 | 3.679736e-52 | 2.664212e-49 |
| MsG0380016134.01 | MsG0480022260.01 | 0.812020 | 5.230952e-51 | 3.288485e-48 |
| MsG0380016134.01 | MsG0480022646.01 | 0.813491 | 2.492023e-51 | 1.629831e-48 |
| MsG0380016134.01 | MsG0480022647.01 | 0.804394 | 2.206303e-49 | 1.136257e-46 |
| MsG0380016134.01 | MsG0480023098.01 | 0.802131 | 6.489982e-49 | 3.154314e-46 |
| MsG0380016134.01 | MsG0480023216.01 | 0.808529 | 2.961175e-50 | 1.697186e-47 |
| MsG0380016134.01 | MsG0480023314.01 | 0.850627 | 1.502424e-60 | 2.961287e-57 |
| MsG0380016134.01 | MsG0480023389.01 | 0.806900 | 6.570529e-50 | 3.608869e-47 |
| MsG0380016134.01 | MsG0480023569.01 | 0.809150 | 2.180883e-50 | 1.270697e-47 |
| MsG0380016134.01 | MsG0480023590.01 | 0.830699 | 2.534755e-55 | 2.691249e-52 |
| MsG0380016134.01 | MsG0480023661.01 | 0.821635 | 3.635565e-53 | 2.974071e-50 |
| MsG0380016134.01 | MsG0480023845.01 | 0.808622 | 2.829115e-50 | 1.625306e-47 |
| MsG0380016134.01 | MsG0480023992.01 | 0.800949 | 1.133790e-48 | 5.348299e-46 |
| MsG0380016134.01 | MsG0580024679.01 | 0.812020 | 5.230281e-51 | 3.288088e-48 |
| MsG0380016134.01 | MsG0580024873.01 | 0.822673 | 2.089285e-53 | 1.760509e-50 |
| MsG0380016134.01 | MsG0580027394.01 | 0.810107 | 1.358626e-50 | 8.119084e-48 |
| MsG0380016134.01 | MsG0580028024.01 | 0.812470 | 4.171768e-51 | 2.654899e-48 |
| MsG0380016134.01 | MsG0580028059.01 | 0.802963 | 4.372513e-49 | 2.170659e-46 |
| MsG0380016134.01 | MsG0580028306.01 | 0.811002 | 8.706177e-51 | 5.328150e-48 |
| MsG0380016134.01 | MsG0580028335.01 | 0.830884 | 2.283399e-55 | 2.437589e-52 |
| MsG0380016134.01 | MsG0580029354.01 | 0.811224 | 7.791000e-51 | 4.795528e-48 |
| MsG0380016134.01 | MsG0580029529.01 | 0.827282 | 1.705283e-54 | 1.638886e-51 |
| MsG0380016134.01 | MsG0580029605.01 | 0.805548 | 1.265664e-49 | 6.714867e-47 |
| MsG0380016134.01 | MsG0580029753.01 | 0.848518 | 5.822820e-60 | 1.071447e-56 |
| MsG0380016134.01 | MsG0680030627.01 | 0.808713 | 2.704881e-50 | 1.557648e-47 |
| MsG0380016134.01 | MsG0680030957.01 | 0.836670 | 8.166382e-57 | 1.036283e-53 |
| MsG0380016134.01 | MsG0680031115.01 | 0.809901 | 1.504989e-50 | 8.945114e-48 |
| MsG0380016134.01 | MsG0680031715.01 | 0.800399 | 1.467798e-48 | 6.827764e-46 |
| MsG0380016134.01 | MsG0680032515.01 | 0.817002 | 4.132462e-52 | 2.973967e-49 |
| MsG0380016134.01 | MsG0680033377.01 | 0.823911 | 1.073557e-53 | 9.368393e-51 |
| MsG0380016134.01 | MsG0680034064.01 | 0.844375 | 7.860398e-59 | 1.266418e-55 |
| MsG0380016134.01 | MsG0680035731.01 | 0.832762 | 7.858098e-56 | 8.868201e-53 |
| MsG0380016134.01 | MsG0680035791.01 | 0.814056 | 1.871022e-51 | 1.242477e-48 |
| MsG0380016134.01 | MsG0780036443.01 | 0.822925 | 1.824457e-53 | 1.548372e-50 |
| MsG0380016134.01 | MsG0780037184.01 | 0.807522 | 4.850794e-50 | 2.707787e-47 |
| MsG0380016134.01 | MsG0780038571.01 | 0.818567 | 1.832260e-52 | 1.376373e-49 |
| MsG0380016134.01 | MsG0780038616.01 | 0.825406 | 4.769795e-54 | 4.343608e-51 |
| MsG0380016134.01 | MsG0780038784.01 | 0.835603 | 1.523918e-56 | 1.872746e-53 |
| MsG0380016134.01 | MsG0780039675.01 | 0.834695 | 2.583469e-56 | 3.088985e-53 |
| MsG0380016134.01 | MsG0780039746.01 | 0.821747 | 3.425165e-53 | 2.810791e-50 |
| MsG0380016134.01 | MsG0780039975.01 | 0.827404 | 1.593840e-54 | 1.537362e-51 |
| MsG0380016134.01 | MsG0780040284.01 | 0.827611 | 1.422018e-54 | 1.379568e-51 |
| MsG0380016134.01 | MsG0780041138.01 | 0.803546 | 3.311203e-49 | 1.668638e-46 |
| MsG0380016134.01 | MsG0880042475.01 | 0.840940 | 6.422322e-58 | 9.291450e-55 |
| MsG0380016134.01 | MsG0880042555.01 | 0.821610 | 3.684478e-53 | 3.011917e-50 |
| MsG0380016134.01 | MsG0880042890.01 | 0.822019 | 2.963339e-53 | 2.450668e-50 |
| MsG0380016134.01 | MsG0880044392.01 | 0.822366 | 2.462273e-53 | 2.056856e-50 |
| MsG0380016134.01 | MsG0880044414.01 | 0.822616 | 2.154087e-53 | 1.812305e-50 |
| MsG0380016134.01 | MsG0880044487.01 | 0.810348 | 1.205679e-50 | 7.250231e-48 |
| MsG0380016134.01 | MsG0880045101.01 | 0.813578 | 2.384842e-51 | 1.563327e-48 |
| MsG0380016134.01 | MsG0880045361.01 | 0.817975 | 2.494356e-52 | 1.843416e-49 |
| MsG0380016134.01 | MsG0880046764.01 | 0.809736 | 1.632559e-50 | 9.661866e-48 |
| MsG0380016134.01 | MsG0880046765.01 | 0.813190 | 2.901367e-51 | 1.881870e-48 |
| MsG0380016134.01 | MsG0880046791.01 | 0.835854 | 1.316586e-56 | 1.630161e-53 |
| MsG0280006805.01 | MsG0380016134.01 | 0.821498 | 3.910205e-53 | 3.186405e-50 |
| MsG0280007075.01 | MsG0380016134.01 | 0.806861 | 6.695570e-50 | 3.673983e-47 |
| MsG0280008591.01 | MsG0380016134.01 | 0.822989 | 1.763377e-53 | 1.499249e-50 |
| MsG0280010353.01 | MsG0380016134.01 | 0.804669 | 1.933222e-49 | 1.002734e-46 |
| MsG0280010376.01 | MsG0380016134.01 | 0.815438 | 9.244191e-52 | 6.373538e-49 |
| MsG0280010503.01 | MsG0380016134.01 | 0.800042 | 1.735212e-48 | 7.998667e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380016134.01 | MsG0480021386.01 | PPI |
| MsG0380016134.01 | MsG0480021386.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016134.01.T01 | MTR_3g084150 | 95.652 | 92 | 4 | 0 | 1 | 92 | 1 | 92 | 8.44e-64 | 187 |
| MsG0380016134.01.T01 | MTR_3g084180 | 94.565 | 92 | 5 | 0 | 1 | 92 | 1 | 92 | 5.77e-63 | 185 |
| MsG0380016134.01.T01 | MTR_8g461410 | 92.391 | 92 | 7 | 0 | 1 | 92 | 1 | 92 | 3.13e-62 | 184 |
| MsG0380016134.01.T01 | MTR_3g110042 | 90.805 | 87 | 8 | 0 | 1 | 87 | 1 | 87 | 9.38e-56 | 167 |
| MsG0380016134.01.T01 | MTR_3g084170 | 87.097 | 93 | 10 | 2 | 1 | 92 | 1 | 92 | 4.02e-55 | 166 |
| MsG0380016134.01.T01 | MTR_3g084240 | 86.022 | 93 | 11 | 2 | 1 | 92 | 1 | 92 | 4.22e-54 | 163 |
| MsG0380016134.01.T01 | MTR_3g110038 | 86.022 | 93 | 11 | 2 | 1 | 92 | 1 | 92 | 4.70e-54 | 163 |
| MsG0380016134.01.T01 | MTR_3g084220 | 84.946 | 93 | 12 | 2 | 1 | 92 | 1 | 92 | 1.90e-53 | 161 |
| MsG0380016134.01.T01 | MTR_3g110032 | 81.720 | 93 | 16 | 1 | 1 | 92 | 1 | 93 | 1.00e-52 | 159 |
| MsG0380016134.01.T01 | MTR_3g117630 | 87.209 | 86 | 11 | 0 | 7 | 92 | 7 | 92 | 1.99e-52 | 159 |
| MsG0380016134.01.T01 | MTR_4g050700 | 80.645 | 93 | 17 | 1 | 1 | 92 | 1 | 93 | 2.07e-52 | 159 |
| MsG0380016134.01.T01 | MTR_2g012410 | 80.645 | 93 | 17 | 1 | 1 | 92 | 1 | 93 | 2.07e-52 | 159 |
| MsG0380016134.01.T01 | MTR_3g084260 | 78.495 | 93 | 19 | 1 | 1 | 92 | 1 | 93 | 5.77e-50 | 152 |
| MsG0380016134.01.T01 | MTR_4g072880 | 75.269 | 93 | 22 | 1 | 1 | 92 | 1 | 93 | 5.02e-49 | 150 |
| MsG0380016134.01.T01 | MTR_3g084250 | 73.913 | 92 | 24 | 0 | 1 | 92 | 1 | 92 | 4.77e-48 | 148 |
| MsG0380016134.01.T01 | MTR_4g072500 | 75.000 | 92 | 23 | 0 | 1 | 92 | 1 | 92 | 5.62e-48 | 147 |
| MsG0380016134.01.T01 | MTR_4g072310 | 74.194 | 93 | 23 | 1 | 1 | 92 | 1 | 93 | 8.80e-48 | 147 |
| MsG0380016134.01.T01 | MTR_4g072250 | 76.344 | 93 | 20 | 2 | 1 | 92 | 1 | 92 | 1.40e-47 | 147 |
| MsG0380016134.01.T01 | MTR_4g072570 | 76.087 | 92 | 22 | 0 | 1 | 92 | 1 | 92 | 2.89e-47 | 146 |
| MsG0380016134.01.T01 | MTR_4g072480 | 72.826 | 92 | 25 | 0 | 1 | 92 | 1 | 92 | 3.23e-46 | 143 |
| MsG0380016134.01.T01 | MTR_4g072270 | 72.043 | 93 | 25 | 1 | 1 | 92 | 1 | 93 | 3.51e-46 | 143 |
| MsG0380016134.01.T01 | MTR_4g072680 | 72.826 | 92 | 25 | 0 | 1 | 92 | 1 | 92 | 5.46e-46 | 142 |
| MsG0380016134.01.T01 | MTR_4g072620 | 71.739 | 92 | 26 | 0 | 1 | 92 | 1 | 92 | 8.20e-46 | 142 |
| MsG0380016134.01.T01 | MTR_4g072230 | 76.344 | 93 | 19 | 2 | 1 | 92 | 1 | 91 | 8.31e-46 | 142 |
| MsG0380016134.01.T01 | MTR_4g072330 | 72.222 | 90 | 23 | 1 | 1 | 90 | 1 | 88 | 1.49e-45 | 141 |
| MsG0380016134.01.T01 | MTR_4g072730 | 72.527 | 91 | 25 | 0 | 1 | 91 | 1 | 91 | 1.57e-45 | 141 |
| MsG0380016134.01.T01 | MTR_4g072610 | 74.444 | 90 | 17 | 1 | 1 | 90 | 1 | 84 | 1.58e-45 | 141 |
| MsG0380016134.01.T01 | MTR_4g072370 | 74.444 | 90 | 21 | 1 | 1 | 90 | 1 | 88 | 1.88e-45 | 141 |
| MsG0380016134.01.T01 | MTR_4g072530 | 73.333 | 90 | 24 | 0 | 1 | 90 | 1 | 90 | 1.98e-45 | 141 |
| MsG0380016134.01.T01 | MTR_4g072640 | 74.444 | 90 | 23 | 0 | 1 | 90 | 1 | 90 | 2.40e-45 | 141 |
| MsG0380016134.01.T01 | MTR_4g072860 | 73.118 | 93 | 24 | 1 | 1 | 92 | 1 | 93 | 2.61e-45 | 141 |
| MsG0380016134.01.T01 | MTR_4g072870 | 69.231 | 91 | 27 | 1 | 1 | 90 | 1 | 91 | 1.32e-44 | 139 |
| MsG0380016134.01.T01 | MTR_4g072740 | 73.333 | 90 | 19 | 1 | 1 | 90 | 1 | 85 | 1.39e-44 | 139 |
| MsG0380016134.01.T01 | MTR_4g072240 | 71.429 | 91 | 25 | 1 | 1 | 90 | 1 | 91 | 1.46e-44 | 139 |
| MsG0380016134.01.T01 | MTR_4g072460 | 70.652 | 92 | 27 | 0 | 1 | 92 | 1 | 92 | 2.02e-44 | 139 |
| MsG0380016134.01.T01 | MTR_4g072490 | 73.626 | 91 | 17 | 2 | 1 | 90 | 1 | 85 | 2.13e-44 | 138 |
| MsG0380016134.01.T01 | MTR_4g072830 | 75.281 | 89 | 20 | 1 | 1 | 89 | 1 | 87 | 3.33e-44 | 138 |
| MsG0380016134.01.T01 | MTR_4g072300 | 71.429 | 91 | 25 | 1 | 1 | 90 | 1 | 91 | 5.93e-44 | 137 |
| MsG0380016134.01.T01 | MTR_4g072470 | 72.222 | 90 | 20 | 1 | 1 | 90 | 1 | 85 | 1.11e-43 | 136 |
| MsG0380016134.01.T01 | MTR_4g072580 | 73.626 | 91 | 17 | 2 | 1 | 90 | 1 | 85 | 2.08e-43 | 136 |
| MsG0380016134.01.T01 | MTR_4g072650 | 72.222 | 90 | 19 | 1 | 1 | 90 | 1 | 84 | 2.40e-43 | 135 |
| MsG0380016134.01.T01 | MTR_4g072220 | 68.817 | 93 | 28 | 1 | 1 | 92 | 1 | 93 | 4.85e-43 | 135 |
| MsG0380016134.01.T01 | MTR_4g072260 | 66.667 | 93 | 30 | 1 | 1 | 92 | 1 | 93 | 6.24e-43 | 135 |
| MsG0380016134.01.T01 | MTR_4g072465 | 70.000 | 90 | 23 | 1 | 1 | 90 | 1 | 86 | 6.24e-43 | 135 |
| MsG0380016134.01.T01 | MTR_4g072820 | 72.527 | 91 | 18 | 2 | 1 | 90 | 1 | 85 | 1.45e-42 | 134 |
| MsG0380016134.01.T01 | MTR_3g084210 | 72.826 | 92 | 25 | 0 | 1 | 92 | 1 | 92 | 2.49e-42 | 133 |
| MsG0380016134.01.T01 | MTR_4g072630 | 68.889 | 90 | 24 | 1 | 1 | 90 | 1 | 86 | 5.48e-42 | 132 |
| MsG0380016134.01.T01 | MTR_4g072890 | 67.033 | 91 | 29 | 1 | 1 | 90 | 1 | 91 | 5.63e-42 | 132 |
| MsG0380016134.01.T01 | MTR_4g072850 | 73.404 | 94 | 23 | 1 | 1 | 92 | 1 | 94 | 2.01e-41 | 131 |
| MsG0380016134.01.T01 | MTR_4g072540 | 73.333 | 90 | 20 | 1 | 1 | 90 | 1 | 86 | 3.70e-41 | 130 |
| MsG0380016134.01.T01 | MTR_4g072670 | 71.111 | 90 | 22 | 1 | 1 | 90 | 1 | 86 | 7.63e-41 | 129 |
| MsG0380016134.01.T01 | MTR_5g008360 | 77.215 | 79 | 18 | 0 | 14 | 92 | 5 | 83 | 9.00e-41 | 129 |
| MsG0380016134.01.T01 | MTR_4g072660 | 67.391 | 92 | 25 | 1 | 1 | 92 | 1 | 87 | 1.57e-40 | 129 |
| MsG0380016134.01.T01 | MTR_3g084190 | 70.652 | 92 | 27 | 0 | 1 | 92 | 1 | 92 | 3.39e-40 | 128 |
| MsG0380016134.01.T01 | MTR_4g072720 | 71.111 | 90 | 22 | 1 | 1 | 90 | 1 | 86 | 5.03e-40 | 127 |
| MsG0380016134.01.T01 | MTR_8g461420 | 71.111 | 90 | 26 | 0 | 1 | 90 | 1 | 90 | 9.94e-40 | 127 |
| MsG0380016134.01.T01 | MTR_4g072600 | 72.727 | 88 | 17 | 2 | 1 | 87 | 1 | 82 | 1.33e-39 | 126 |
| MsG0380016134.01.T01 | MTR_3g084200 | 84.932 | 73 | 9 | 2 | 1 | 72 | 1 | 72 | 1.37e-39 | 127 |
| MsG0380016134.01.T01 | MTR_3g084160 | 69.565 | 92 | 28 | 0 | 1 | 92 | 1 | 92 | 1.78e-39 | 126 |
| MsG0380016134.01.T01 | MTR_3g084230 | 71.111 | 90 | 26 | 0 | 1 | 90 | 1 | 90 | 2.50e-39 | 125 |
| MsG0380016134.01.T01 | MTR_4g072510 | 70.000 | 90 | 23 | 1 | 1 | 90 | 1 | 86 | 5.15e-39 | 125 |
| MsG0380016134.01.T01 | MTR_4g072590 | 71.111 | 90 | 21 | 1 | 1 | 90 | 1 | 85 | 7.03e-39 | 124 |
| MsG0380016134.01.T01 | MTR_3g110045 | 72.222 | 90 | 25 | 0 | 3 | 92 | 62 | 151 | 7.89e-39 | 126 |
| MsG0380016134.01.T01 | MTR_4g072380 | 70.330 | 91 | 21 | 2 | 1 | 90 | 1 | 86 | 1.50e-38 | 124 |
| MsG0380016134.01.T01 | MTR_5g008370 | 67.033 | 91 | 30 | 0 | 1 | 91 | 1 | 91 | 5.74e-38 | 124 |
| MsG0380016134.01.T01 | MTR_4g072940 | 70.652 | 92 | 25 | 1 | 3 | 92 | 33 | 124 | 7.75e-37 | 120 |
| MsG0380016134.01.T01 | MTR_4g072690 | 70.000 | 90 | 22 | 1 | 1 | 90 | 1 | 85 | 1.62e-36 | 118 |
| MsG0380016134.01.T01 | MTR_4g072450 | 68.889 | 90 | 23 | 1 | 1 | 90 | 1 | 85 | 8.48e-36 | 117 |
| MsG0380016134.01.T01 | MTR_5g008350 | 71.250 | 80 | 16 | 2 | 1 | 79 | 1 | 74 | 8.69e-36 | 116 |
| MsG0380016134.01.T01 | MTR_4g072550 | 71.233 | 73 | 21 | 0 | 20 | 92 | 31 | 103 | 1.76e-34 | 114 |
| MsG0380016134.01.T01 | MTR_4g072980 | 56.842 | 95 | 38 | 2 | 1 | 92 | 1 | 95 | 3.32e-34 | 113 |
| MsG0380016134.01.T01 | MTR_4g072560 | 52.041 | 98 | 39 | 3 | 1 | 90 | 1 | 98 | 7.08e-32 | 107 |
| MsG0380016134.01.T01 | MTR_4g072770 | 58.889 | 90 | 27 | 1 | 1 | 90 | 1 | 80 | 1.70e-31 | 105 |
| MsG0380016134.01.T01 | MTR_4g072910 | 59.036 | 83 | 34 | 0 | 8 | 90 | 18 | 100 | 1.78e-31 | 106 |
| MsG0380016134.01.T01 | MTR_3g117640 | 66.667 | 69 | 22 | 1 | 24 | 91 | 33 | 101 | 2.66e-30 | 103 |
| MsG0380016134.01.T01 | MTR_4g072750 | 68.919 | 74 | 21 | 1 | 1 | 72 | 1 | 74 | 6.22e-30 | 102 |
| MsG0380016134.01.T01 | MTR_4g072290 | 58.065 | 93 | 24 | 2 | 1 | 92 | 1 | 79 | 8.89e-30 | 101 |
| MsG0380016134.01.T01 | MTR_8g461400 | 58.065 | 93 | 11 | 3 | 1 | 92 | 1 | 66 | 2.33e-28 | 97.4 |
| MsG0380016134.01.T01 | MTR_4g072280 | 62.667 | 75 | 27 | 1 | 1 | 74 | 1 | 75 | 5.15e-27 | 94.7 |
| MsG0380016134.01.T01 | MTR_3g110035 | 65.152 | 66 | 23 | 0 | 27 | 92 | 73 | 138 | 5.32e-27 | 96.3 |
| MsG0380016134.01.T01 | MTR_4g072930 | 48.936 | 94 | 42 | 2 | 3 | 90 | 17 | 110 | 1.19e-25 | 92.0 |
| MsG0380016134.01.T01 | MTR_3g113310 | 58.462 | 65 | 26 | 1 | 23 | 87 | 40 | 103 | 1.81e-24 | 89.0 |
| MsG0380016134.01.T01 | MTR_3g117610 | 60.000 | 65 | 25 | 1 | 23 | 87 | 43 | 106 | 1.88e-23 | 86.7 |
| MsG0380016134.01.T01 | MTR_6g077850 | 55.224 | 67 | 30 | 0 | 24 | 90 | 33 | 99 | 1.91e-23 | 86.3 |
| MsG0380016134.01.T01 | MTR_4g072190 | 51.250 | 80 | 36 | 2 | 8 | 87 | 21 | 97 | 4.79e-23 | 85.1 |
| MsG0380016134.01.T01 | MTR_4g072840 | 52.273 | 88 | 10 | 3 | 1 | 87 | 1 | 57 | 2.12e-22 | 82.4 |
| MsG0380016134.01.T01 | MTR_5g021820 | 54.688 | 64 | 28 | 1 | 24 | 87 | 39 | 101 | 8.07e-20 | 77.0 |
| MsG0380016134.01.T01 | MTR_8g076040 | 50.000 | 74 | 36 | 1 | 14 | 87 | 30 | 102 | 8.85e-20 | 77.0 |
| MsG0380016134.01.T01 | MTR_2g043960 | 53.030 | 66 | 30 | 1 | 17 | 82 | 68 | 132 | 9.11e-19 | 75.9 |
| MsG0380016134.01.T01 | MTR_4g124750 | 53.125 | 64 | 29 | 1 | 24 | 87 | 68 | 130 | 5.92e-18 | 73.6 |
| MsG0380016134.01.T01 | MTR_1g009150 | 52.113 | 71 | 33 | 1 | 15 | 85 | 61 | 130 | 7.84e-18 | 73.9 |
| MsG0380016134.01.T01 | MTR_4g005310 | 50.000 | 66 | 32 | 1 | 21 | 85 | 58 | 123 | 6.53e-17 | 70.9 |
| MsG0380016134.01.T01 | MTR_4g005320 | 54.098 | 61 | 27 | 1 | 25 | 85 | 70 | 129 | 7.41e-17 | 71.2 |
| MsG0380016134.01.T01 | MTR_1g094750 | 44.318 | 88 | 45 | 2 | 1 | 85 | 23 | 109 | 1.18e-16 | 69.3 |
| MsG0380016134.01.T01 | MTR_3g105900 | 83.333 | 36 | 6 | 0 | 24 | 59 | 1171 | 1206 | 2.45e-15 | 69.7 |
| MsG0380016134.01.T01 | MTR_1g024085 | 49.254 | 67 | 33 | 1 | 16 | 82 | 28 | 93 | 3.54e-15 | 66.2 |
| MsG0380016134.01.T01 | MTR_3g109160 | 52.239 | 67 | 31 | 1 | 25 | 91 | 69 | 134 | 4.92e-15 | 66.6 |
| MsG0380016134.01.T01 | MTR_4g072160 | 50.000 | 70 | 32 | 2 | 17 | 85 | 29 | 96 | 6.76e-15 | 65.5 |
| MsG0380016134.01.T01 | MTR_8g461210 | 42.529 | 87 | 47 | 2 | 7 | 91 | 17 | 102 | 9.16e-15 | 64.7 |
| MsG0380016134.01.T01 | MTR_7g118010 | 50.794 | 63 | 28 | 2 | 25 | 85 | 23 | 84 | 2.27e-14 | 63.2 |
| MsG0380016134.01.T01 | MTR_3g092220 | 41.667 | 84 | 43 | 4 | 1 | 82 | 12 | 91 | 3.13e-14 | 63.2 |
| MsG0380016134.01.T01 | MTR_4g025830 | 44.776 | 67 | 33 | 2 | 25 | 88 | 79 | 144 | 4.04e-14 | 63.9 |
| MsG0380016134.01.T01 | MTR_1g061570 | 42.169 | 83 | 44 | 2 | 9 | 91 | 6 | 84 | 6.14e-14 | 62.8 |
| MsG0380016134.01.T01 | MTR_0388s0020 | 41.975 | 81 | 42 | 3 | 10 | 87 | 61 | 139 | 7.06e-14 | 63.2 |
| MsG0380016134.01.T01 | MTR_7g101740 | 46.875 | 64 | 33 | 1 | 24 | 87 | 39 | 101 | 1.14e-13 | 61.6 |
| MsG0380016134.01.T01 | MTR_7g405740 | 40.476 | 84 | 45 | 3 | 6 | 85 | 44 | 126 | 2.73e-13 | 62.0 |
| MsG0380016134.01.T01 | MTR_1g063950 | 40.580 | 69 | 40 | 1 | 17 | 85 | 40 | 107 | 3.84e-13 | 60.5 |
| MsG0380016134.01.T01 | MTR_8g026730 | 48.333 | 60 | 28 | 2 | 25 | 82 | 27 | 85 | 6.65e-13 | 59.7 |
| MsG0380016134.01.T01 | MTR_8g101520 | 37.500 | 88 | 50 | 2 | 7 | 90 | 28 | 114 | 1.72e-12 | 59.7 |
| MsG0380016134.01.T01 | MTR_3g098970 | 34.211 | 76 | 49 | 1 | 17 | 92 | 45 | 119 | 2.12e-12 | 59.3 |
| MsG0380016134.01.T01 | MTR_4g021810 | 52.542 | 59 | 26 | 2 | 25 | 82 | 26 | 83 | 2.53e-12 | 58.2 |
| MsG0380016134.01.T01 | MTR_1g059770 | 31.707 | 82 | 55 | 1 | 6 | 87 | 30 | 110 | 1.35e-11 | 56.6 |
| MsG0380016134.01.T01 | MTR_3g097120 | 38.750 | 80 | 40 | 2 | 19 | 90 | 3 | 81 | 1.83e-11 | 55.8 |
| MsG0380016134.01.T01 | MTR_8g096470 | 41.667 | 60 | 34 | 1 | 26 | 85 | 47 | 105 | 4.70e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016134.01.T01 | AT4G38840 | 59.596 | 99 | 31 | 2 | 1 | 90 | 1 | 99 | 2.76e-36 | 118 |
| MsG0380016134.01.T01 | AT5G18020 | 67.105 | 76 | 24 | 1 | 16 | 90 | 15 | 90 | 1.62e-34 | 114 |
| MsG0380016134.01.T01 | AT5G18060 | 68.919 | 74 | 21 | 2 | 19 | 90 | 17 | 90 | 4.04e-33 | 110 |
| MsG0380016134.01.T01 | AT5G18050 | 63.158 | 76 | 27 | 1 | 16 | 90 | 15 | 90 | 9.91e-33 | 109 |
| MsG0380016134.01.T01 | AT4G38825 | 65.333 | 75 | 25 | 1 | 17 | 90 | 15 | 89 | 1.17e-32 | 109 |
| MsG0380016134.01.T01 | AT5G18030 | 68.056 | 72 | 22 | 1 | 20 | 90 | 17 | 88 | 1.26e-32 | 108 |
| MsG0380016134.01.T01 | AT5G18080 | 64.474 | 76 | 26 | 1 | 16 | 90 | 15 | 90 | 1.28e-32 | 108 |
| MsG0380016134.01.T01 | AT2G21200 | 66.667 | 72 | 23 | 1 | 19 | 89 | 15 | 86 | 7.02e-32 | 107 |
| MsG0380016134.01.T01 | AT2G21210 | 63.514 | 74 | 25 | 1 | 19 | 90 | 22 | 95 | 1.23e-31 | 107 |
| MsG0380016134.01.T01 | AT5G18010 | 61.842 | 76 | 28 | 1 | 16 | 90 | 15 | 90 | 3.06e-31 | 105 |
| MsG0380016134.01.T01 | AT2G21210 | 63.514 | 74 | 25 | 1 | 19 | 90 | 89 | 162 | 7.70e-31 | 107 |
| MsG0380016134.01.T01 | AT4G34770 | 65.789 | 76 | 24 | 1 | 18 | 91 | 28 | 103 | 1.12e-30 | 104 |
| MsG0380016134.01.T01 | AT3G03840 | 61.644 | 73 | 26 | 1 | 21 | 91 | 23 | 95 | 1.16e-29 | 101 |
| MsG0380016134.01.T01 | AT4G34800 | 56.322 | 87 | 34 | 2 | 7 | 89 | 2 | 88 | 1.71e-29 | 101 |
| MsG0380016134.01.T01 | AT3G03850 | 67.647 | 68 | 20 | 1 | 26 | 91 | 26 | 93 | 9.81e-29 | 99.4 |
| MsG0380016134.01.T01 | AT4G38850 | 56.098 | 82 | 31 | 2 | 12 | 88 | 6 | 87 | 3.05e-28 | 98.2 |
| MsG0380016134.01.T01 | AT3G03820 | 57.143 | 77 | 30 | 1 | 18 | 91 | 20 | 96 | 4.43e-28 | 97.8 |
| MsG0380016134.01.T01 | AT4G34810 | 61.765 | 68 | 22 | 1 | 24 | 87 | 47 | 114 | 8.31e-28 | 97.8 |
| MsG0380016134.01.T01 | AT3G03830 | 51.648 | 91 | 37 | 2 | 7 | 90 | 2 | 92 | 1.26e-26 | 94.0 |
| MsG0380016134.01.T01 | AT4G13790 | 50.602 | 83 | 34 | 2 | 8 | 88 | 13 | 90 | 2.16e-25 | 90.9 |
| MsG0380016134.01.T01 | AT4G34780 | 59.155 | 71 | 26 | 1 | 23 | 90 | 26 | 96 | 8.43e-25 | 89.7 |
| MsG0380016134.01.T01 | AT1G75580 | 51.899 | 79 | 37 | 1 | 9 | 87 | 28 | 105 | 1.40e-23 | 86.7 |
| MsG0380016134.01.T01 | AT4G34790 | 60.000 | 65 | 24 | 1 | 25 | 87 | 39 | 103 | 2.11e-23 | 86.3 |
| MsG0380016134.01.T01 | AT4G38860 | 56.923 | 65 | 28 | 0 | 23 | 87 | 38 | 102 | 2.22e-23 | 86.3 |
| MsG0380016134.01.T01 | AT4G34760 | 46.429 | 84 | 44 | 1 | 4 | 87 | 22 | 104 | 5.09e-22 | 82.8 |
| MsG0380016134.01.T01 | AT2G21220 | 56.923 | 65 | 27 | 1 | 23 | 87 | 38 | 101 | 5.24e-22 | 82.8 |
| MsG0380016134.01.T01 | AT4G36110 | 47.619 | 84 | 41 | 2 | 8 | 89 | 21 | 103 | 4.75e-21 | 80.1 |
| MsG0380016134.01.T01 | AT2G16580 | 49.315 | 73 | 36 | 1 | 15 | 87 | 34 | 105 | 4.52e-20 | 77.8 |
| MsG0380016134.01.T01 | AT3G43120 | 50.725 | 69 | 33 | 1 | 14 | 82 | 68 | 135 | 6.85e-20 | 79.0 |
| MsG0380016134.01.T01 | AT2G18010 | 53.030 | 66 | 30 | 1 | 24 | 89 | 47 | 111 | 7.51e-20 | 77.4 |
| MsG0380016134.01.T01 | AT3G20220 | 48.052 | 77 | 38 | 2 | 14 | 89 | 36 | 111 | 1.48e-19 | 77.0 |
| MsG0380016134.01.T01 | AT1G19830 | 45.977 | 87 | 34 | 2 | 8 | 82 | 19 | 104 | 7.36e-19 | 75.1 |
| MsG0380016134.01.T01 | AT5G20810 | 53.030 | 66 | 30 | 1 | 17 | 82 | 71 | 135 | 3.22e-18 | 74.7 |
| MsG0380016134.01.T01 | AT5G20810 | 53.030 | 66 | 30 | 1 | 17 | 82 | 71 | 135 | 3.65e-18 | 75.1 |
| MsG0380016134.01.T01 | AT5G66260 | 47.674 | 86 | 40 | 3 | 8 | 90 | 15 | 98 | 1.14e-16 | 68.9 |
| MsG0380016134.01.T01 | AT1G75590 | 54.237 | 59 | 26 | 1 | 24 | 82 | 41 | 98 | 6.41e-16 | 68.6 |
| MsG0380016134.01.T01 | AT5G10990 | 48.611 | 72 | 30 | 2 | 24 | 89 | 40 | 110 | 2.24e-15 | 67.0 |
| MsG0380016134.01.T01 | AT4G31320 | 48.101 | 79 | 33 | 3 | 8 | 85 | 68 | 139 | 3.45e-15 | 67.4 |
| MsG0380016134.01.T01 | AT1G19840 | 54.237 | 59 | 26 | 1 | 24 | 82 | 40 | 97 | 8.72e-15 | 65.5 |
| MsG0380016134.01.T01 | AT4G34750 | 37.975 | 79 | 48 | 1 | 9 | 87 | 21 | 98 | 9.95e-15 | 65.5 |
| MsG0380016134.01.T01 | AT4G34750 | 37.975 | 79 | 48 | 1 | 9 | 87 | 21 | 98 | 9.95e-15 | 65.5 |
| MsG0380016134.01.T01 | AT3G51200 | 46.269 | 67 | 34 | 2 | 20 | 85 | 34 | 99 | 2.52e-14 | 63.2 |
| MsG0380016134.01.T01 | AT2G24400 | 49.367 | 79 | 32 | 3 | 8 | 85 | 52 | 123 | 3.85e-14 | 64.3 |
| MsG0380016134.01.T01 | AT2G37030 | 46.032 | 63 | 33 | 1 | 24 | 86 | 48 | 109 | 1.24e-13 | 62.0 |
| MsG0380016134.01.T01 | AT2G46690 | 39.744 | 78 | 43 | 2 | 17 | 91 | 16 | 92 | 1.35e-13 | 61.6 |
| MsG0380016134.01.T01 | AT3G61900 | 44.286 | 70 | 35 | 2 | 24 | 90 | 29 | 97 | 4.46e-13 | 60.8 |
| MsG0380016134.01.T01 | AT3G12830 | 38.095 | 84 | 47 | 2 | 6 | 85 | 27 | 109 | 2.47e-12 | 58.9 |
| MsG0380016134.01.T01 | AT3G53250 | 42.857 | 63 | 32 | 1 | 24 | 86 | 51 | 109 | 3.15e-12 | 58.2 |
| MsG0380016134.01.T01 | AT4G00880 | 52.459 | 61 | 26 | 2 | 24 | 82 | 27 | 86 | 3.29e-12 | 58.2 |
| MsG0380016134.01.T01 | AT3G09870 | 47.692 | 65 | 31 | 2 | 15 | 77 | 35 | 98 | 4.79e-12 | 57.4 |
| MsG0380016134.01.T01 | AT3G53250 | 42.857 | 63 | 32 | 1 | 24 | 86 | 82 | 140 | 5.89e-12 | 58.2 |
| MsG0380016134.01.T01 | AT1G56150 | 45.902 | 61 | 32 | 1 | 25 | 85 | 38 | 97 | 1.26e-11 | 56.2 |
| MsG0380016134.01.T01 | AT4G09530 | 41.667 | 72 | 37 | 3 | 14 | 82 | 19 | 88 | 1.61e-11 | 55.8 |
| MsG0380016134.01.T01 | AT4G12410 | 42.647 | 68 | 35 | 2 | 25 | 89 | 76 | 142 | 2.18e-11 | 57.0 |
| MsG0380016134.01.T01 | AT5G53590 | 41.791 | 67 | 33 | 2 | 24 | 85 | 45 | 110 | 2.56e-11 | 56.2 |
Find 22 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGACGAACTTCATTTAC+AGG | 0.268008 | 3:-79477613 | MsG0380016134.01.T01:CDS |
| CAAATTACTTCTCGCTTCAA+TGG | 0.364677 | 3:-79477385 | MsG0380016134.01.T01:CDS |
| TTCGTCTAATAGCAGGTAAA+CGG | 0.451949 | 3:+79477626 | None:intergenic |
| AAATTACTTCTCGCTTCAAT+GGG | 0.465238 | 3:-79477384 | MsG0380016134.01.T01:CDS |
| AGTCAAGCAGAGGAAGAATT+CGG | 0.474154 | 3:-79477463 | MsG0380016134.01.T01:CDS |
| GAATTGTGAGGCCACCCATT+GGG | 0.504738 | 3:+79477431 | None:intergenic |
| GGATATCTTGCAGTATATGT+TGG | 0.514243 | 3:-79477553 | MsG0380016134.01.T01:CDS |
| AATGAAGTTCGTCTAATAGC+AGG | 0.529225 | 3:+79477619 | None:intergenic |
| TTCGGATATGATCACCCAAT+GGG | 0.534324 | 3:-79477445 | MsG0380016134.01.T01:CDS |
| GGAATTGTGAGGCCACCCAT+TGG | 0.541668 | 3:+79477430 | None:intergenic |
| TATACTGCAAGATATCCCTT+TGG | 0.554191 | 3:+79477559 | None:intergenic |
| ATGAAAACATCTTCTGTGCA+AGG | 0.577322 | 3:+79477409 | None:intergenic |
| AAAGCTGTGAATGTGCCAAA+GGG | 0.583150 | 3:-79477574 | MsG0380016134.01.T01:CDS |
| AAAAGCTGTGAATGTGCCAA+AGG | 0.600085 | 3:-79477575 | MsG0380016134.01.T01:CDS |
| ATTCGGATATGATCACCCAA+TGG | 0.609742 | 3:-79477446 | MsG0380016134.01.T01:CDS |
| AGCTTGGTTCAAGTATGACA+TGG | 0.610689 | 3:+79477504 | None:intergenic |
| GCTTGGTTCAAGTATGACAT+GGG | 0.618074 | 3:+79477505 | None:intergenic |
| AAATTTATTGAGTCAAGCAG+AGG | 0.625368 | 3:-79477473 | MsG0380016134.01.T01:CDS |
| GGATATGATCACCCAATGGG+TGG | 0.648309 | 3:-79477442 | MsG0380016134.01.T01:CDS |
| CTTGGTTCAAGTATGACATG+GGG | 0.689184 | 3:+79477506 | None:intergenic |
| ATGTTGGAGAGCAAATGAAG+CGG | 0.701417 | 3:-79477537 | MsG0380016134.01.T01:CDS |
| CTTCTGTGCAAGGAATTGTG+AGG | 0.738315 | 3:+79477419 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATTTTGAAATGAAGCT+TGG | + | Chr3:79477527-79477546 | None:intergenic | 20.0% |
| AAATTACTTCTCGCTTCAAT+GGG | - | Chr3:79477628-79477647 | MsG0380016134.01.T01:CDS | 30.0% | |
| AAATTTATTGAGTCAAGCAG+AGG | - | Chr3:79477539-79477558 | MsG0380016134.01.T01:CDS | 30.0% | |
| ATTAGACGAACTTCATTTAC+AGG | - | Chr3:79477399-79477418 | MsG0380016134.01.T01:CDS | 30.0% | |
| AATGAAGTTCGTCTAATAGC+AGG | + | Chr3:79477396-79477415 | None:intergenic | 35.0% | |
| ATGAAAACATCTTCTGTGCA+AGG | + | Chr3:79477606-79477625 | None:intergenic | 35.0% | |
| CAAATTACTTCTCGCTTCAA+TGG | - | Chr3:79477627-79477646 | MsG0380016134.01.T01:CDS | 35.0% | |
| GGATATCTTGCAGTATATGT+TGG | - | Chr3:79477459-79477478 | MsG0380016134.01.T01:CDS | 35.0% | |
| TATACTGCAAGATATCCCTT+TGG | + | Chr3:79477456-79477475 | None:intergenic | 35.0% | |
| TTCGTCTAATAGCAGGTAAA+CGG | + | Chr3:79477389-79477408 | None:intergenic | 35.0% | |
| AAAAGCTGTGAATGTGCCAA+AGG | - | Chr3:79477437-79477456 | MsG0380016134.01.T01:CDS | 40.0% | |
| AAAGCTGTGAATGTGCCAAA+GGG | - | Chr3:79477438-79477457 | MsG0380016134.01.T01:CDS | 40.0% | |
| AGCTTGGTTCAAGTATGACA+TGG | + | Chr3:79477511-79477530 | None:intergenic | 40.0% | |
| AGTCAAGCAGAGGAAGAATT+CGG | - | Chr3:79477549-79477568 | MsG0380016134.01.T01:CDS | 40.0% | |
| ATGTTGGAGAGCAAATGAAG+CGG | - | Chr3:79477475-79477494 | MsG0380016134.01.T01:CDS | 40.0% | |
| ATTCGGATATGATCACCCAA+TGG | - | Chr3:79477566-79477585 | MsG0380016134.01.T01:CDS | 40.0% | |
| CTTGGTTCAAGTATGACATG+GGG | + | Chr3:79477509-79477528 | None:intergenic | 40.0% | |
| GCTTGGTTCAAGTATGACAT+GGG | + | Chr3:79477510-79477529 | None:intergenic | 40.0% | |
| TTCGGATATGATCACCCAAT+GGG | - | Chr3:79477567-79477586 | MsG0380016134.01.T01:CDS | 40.0% | |
| !!! | TCACAGCTTTTGATGATGCT+TGG | + | Chr3:79477428-79477447 | None:intergenic | 40.0% |
| CTTCTGTGCAAGGAATTGTG+AGG | + | Chr3:79477596-79477615 | None:intergenic | 45.0% | |
| GAATTGTGAGGCCACCCATT+GGG | + | Chr3:79477584-79477603 | None:intergenic | 50.0% | |
| GGATATGATCACCCAATGGG+TGG | - | Chr3:79477570-79477589 | MsG0380016134.01.T01:CDS | 50.0% | |
| GGAATTGTGAGGCCACCCAT+TGG | + | Chr3:79477585-79477604 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 79477378 | 79477656 | 79477378 | ID=MsG0380016134.01;Name=MsG0380016134.01 |
| Chr3 | mRNA | 79477378 | 79477656 | 79477378 | ID=MsG0380016134.01.T01;Parent=MsG0380016134.01;Name=MsG0380016134.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|92 |
| Chr3 | exon | 79477378 | 79477656 | 79477378 | ID=MsG0380016134.01.T01:exon:10310;Parent=MsG0380016134.01.T01 |
| Chr3 | CDS | 79477378 | 79477656 | 79477378 | ID=MsG0380016134.01.T01:cds;Parent=MsG0380016134.01.T01 |
| Gene Sequence |
| Protein sequence |
