AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014940.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014940.01.T01 MTR_3g466250 87.500 496 25 2 1 460 1 495 0.0 844
MsG0380014940.01.T01 MTR_4g121070 82.857 490 41 7 1 460 1 477 0.0 795
MsG0380014940.01.T01 MTR_8g018280 81.095 201 37 1 446 645 710 910 1.35e-88 303
MsG0380014940.01.T01 MTR_8g018040 77.340 203 43 2 446 645 714 916 1.10e-84 290
MsG0380014940.01.T01 MTR_5g086690 76.617 201 46 1 446 645 725 925 2.01e-82 285
MsG0380014940.01.T01 MTR_8g017800 44.175 206 114 1 438 642 720 925 1.05e-37 151
MsG0380014940.01.T01 MTR_8g017800 44.175 206 114 1 438 642 1468 1673 1.05e-37 151
MsG0380014940.01.T01 MTR_8g018170 46.535 202 106 1 446 645 724 925 4.89e-36 146
MsG0380014940.01.T01 MTR_8g018260 46.535 202 106 1 446 645 724 925 9.80e-36 145
MsG0380014940.01.T01 MTR_8g018060 42.584 209 119 1 438 645 709 917 1.72e-35 144
MsG0380014940.01.T01 MTR_8g018130 41.256 223 123 5 438 652 719 941 2.59e-29 125
MsG0380014940.01.T01 MTR_0350s0040 39.500 200 119 1 446 643 174 373 4.46e-28 118
MsG0380014940.01.T01 MTR_8g017945 39.500 200 119 1 446 643 202 401 1.15e-27 119
MsG0380014940.01.T01 MTR_4g043630 35.429 175 112 1 446 619 732 906 1.81e-16 84.3
MsG0380014940.01.T01 MTR_4g043630 35.429 175 112 1 446 619 732 906 1.81e-16 84.3
MsG0380014940.01.T01 MTR_4g043630 35.429 175 112 1 446 619 732 906 1.82e-16 84.3
MsG0380014940.01.T01 MTR_0005s0110 35.429 175 112 1 446 619 732 906 3.46e-16 83.6
MsG0380014940.01.T01 MTR_2g099920 30.603 232 149 4 416 640 524 750 1.66e-15 81.3
MsG0380014940.01.T01 MTR_2g099920 30.603 232 149 4 416 640 703 929 1.76e-15 81.3
MsG0380014940.01.T01 MTR_2g099920 30.603 232 149 4 416 640 635 861 1.84e-15 80.9
MsG0380014940.01.T01 MTR_8g018020 38.793 116 68 2 530 643 612 726 2.51e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014940.01.T01 AT3G02660 69.104 424 107 3 60 460 84 506 0.0 597
MsG0380014940.01.T01 AT3G02660 69.104 424 107 3 60 460 84 506 0.0 597

Find 148 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCAACTCTTTAAATTT+TGG 0.121431 3:+62816167 None:intergenic
CTTGCATTTGGGCAATTTAT+TGG 0.174087 3:-62816381 MsG0380014940.01.T01:CDS
GAGGGTGTTAATGTTCAAAT+TGG 0.195282 3:-62815913 MsG0380014940.01.T01:CDS
ACTCAGTAACAGCTTGAATT+TGG 0.209750 3:-62812651 MsG0380014940.01.T01:CDS
GTTGATCTTTCTGTTTCTTC+TGG 0.223800 3:-62815385 MsG0380014940.01.T01:CDS
ATCTTCCCCATGAACAAATT+TGG 0.226803 3:+62815549 None:intergenic
TTCTGTCTTTGGTGAATTGC+AGG 0.294557 3:-62812805 MsG0380014940.01.T01:CDS
ATATTGAACCATCAACTTCT+TGG 0.297299 3:+62812513 None:intergenic
ATGGTTTGAACGAAGCTCTT+AGG 0.304100 3:-62815528 MsG0380014940.01.T01:CDS
ATTGTGGAGTTGAAGATTTA+TGG 0.308773 3:-62813031 MsG0380014940.01.T01:CDS
AATAAAACGTCGACATTGTT+GGG 0.314946 3:+62812908 None:intergenic
TTGCATTTGGGCAATTTATT+GGG 0.319343 3:-62816380 MsG0380014940.01.T01:CDS
GTGCGTGTCGGTGACCCGTC+TGG 0.321350 3:-62816290 MsG0380014940.01.T01:CDS
AACTGCCGAAAGCTTGCATT+TGG 0.323309 3:-62816393 MsG0380014940.01.T01:CDS
TTGATGAAATTAAACGTTGA+TGG 0.328844 3:-62812881 MsG0380014940.01.T01:CDS
AGAAATGGAAATTCTGTCTT+TGG 0.329953 3:-62812816 MsG0380014940.01.T01:CDS
AACAAATTTGGTAACTTCTT+CGG 0.340398 3:+62815561 None:intergenic
AGGGTGTTAATGTTCAAATT+GGG 0.342798 3:-62815912 MsG0380014940.01.T01:CDS
TTTGAAGATGCCCAATTGAT+AGG 0.345158 3:+62813125 None:intergenic
CAAACACTAGACCTATCAAT+TGG 0.356326 3:-62813136 MsG0380014940.01.T01:CDS
TGGGTCTCATTGTTCTCTCT+TGG 0.362873 3:-62816361 MsG0380014940.01.T01:CDS
TTCCGGATGCTGATGTTGTT+AGG 0.364256 3:-62815687 MsG0380014940.01.T01:CDS
AAATACTGATAAAACTTATA+AGG 0.365026 3:+62815718 None:intergenic
AAACGGAGTGGAAGAGAAAA+GGG 0.369578 3:+62816593 None:intergenic
AGTCAGAGGATGGTGCAATT+TGG 0.370053 3:-62815762 MsG0380014940.01.T01:CDS
CAAAGCTACGAGCTGTTTGA+TGG 0.382736 3:-62812986 MsG0380014940.01.T01:CDS
AAAAGTGATGGTACGAAATT+CGG 0.383590 3:-62815787 MsG0380014940.01.T01:CDS
AGGAAGATATTGCAGGTAGA+AGG 0.384359 3:-62815844 MsG0380014940.01.T01:CDS
GAAGTTACCAAATTTGTTCA+TGG 0.387892 3:-62815556 MsG0380014940.01.T01:CDS
TTTGAGGTTGTTGGTGATGT+TGG 0.389071 3:+62816543 None:intergenic
CATTAAGAAACTTGAAGAAA+TGG 0.393537 3:-62812831 MsG0380014940.01.T01:CDS
AGCCTCCGCTGAGCAGTATT+AGG 0.404057 3:+62815586 None:intergenic
CAATAAAACGTCGACATTGT+TGG 0.404767 3:+62812907 None:intergenic
CTGCTGGAACTGAATTGATT+AGG 0.405094 3:-62815864 MsG0380014940.01.T01:CDS
AAACACCATCAGAACAATCT+TGG 0.406125 3:-62816204 MsG0380014940.01.T01:CDS
TCAGCTTGATGTTGAAACTT+TGG 0.407860 3:-62816249 MsG0380014940.01.T01:CDS
GGAAAGTGTTAGGAAGAGAT+TGG 0.412929 3:-62816016 MsG0380014940.01.T01:CDS
TTTAAAGAGTTGAATGTGAA+TGG 0.416037 3:-62816161 MsG0380014940.01.T01:intron
TTCTATGTTACAAACGATAC+TGG 0.419468 3:-62812536 MsG0380014940.01.T01:CDS
CTCTCTTGGTTCCGCCGCTC+CGG 0.419798 3:-62816347 MsG0380014940.01.T01:CDS
TGTTCTTGAAGCAAAATTTG+TGG 0.422366 3:+62816685 None:intergenic
ATTGATTAGGAAGATATTGC+AGG 0.422855 3:-62815851 MsG0380014940.01.T01:CDS
TTTGTATTTGTTTCAGAATG+AGG 0.423118 3:-62815932 MsG0380014940.01.T01:CDS
CATTGTTGGGGAGTTCAAAC+GGG 0.424837 3:+62812921 None:intergenic
TTCGAGTGGTTTGAGGTTGT+TGG 0.427101 3:+62816534 None:intergenic
ACTTTGGAGAGGAATACTTT+AGG 0.434783 3:-62816233 MsG0380014940.01.T01:CDS
TGGTTTGAACGAAGCTCTTA+GGG 0.435112 3:-62815527 MsG0380014940.01.T01:CDS
TTGTATTTGTTTCAGAATGA+GGG 0.436229 3:-62815931 MsG0380014940.01.T01:CDS
GAAGAAAGAGAGGGTTTGAA+TGG 0.438610 3:+62816626 None:intergenic
GTTACTGAGTGAAATGTGTT+TGG 0.446397 3:+62812664 None:intergenic
TATTGATGAGATAGTGAAGT+TGG 0.446675 3:-62815638 MsG0380014940.01.T01:CDS
GAGTAGATAGTGAAAATAAG+AGG 0.448915 3:-62815294 MsG0380014940.01.T01:CDS
TGATGGCTAAGGAAAGTGTT+AGG 0.451139 3:-62816026 MsG0380014940.01.T01:CDS
AAATTTGTTCATGGGGAAGA+TGG 0.459792 3:-62815547 MsG0380014940.01.T01:CDS
GAATTAGCAACAAAGGTGAT+TGG 0.462088 3:-62812692 MsG0380014940.01.T01:CDS
GTTGTTGGTGATGTTGGTGT+TGG 0.462279 3:+62816549 None:intergenic
ATTGCCCAAATGCAAGCTTT+CGG 0.462905 3:+62816388 None:intergenic
ATGACATTTCGAGTGGTTTG+AGG 0.463983 3:+62816527 None:intergenic
TAGATAACTCCTTCGGAAGA+AGG 0.464679 3:+62813065 None:intergenic
CAGGTAGAAGGTGGTACCTA+TGG 0.467385 3:-62815832 MsG0380014940.01.T01:CDS
GGCGACTGAAGCGTTGAGGC+CGG 0.469483 3:-62815506 MsG0380014940.01.T01:CDS
TGCAGGTTGTTCTTGTGAAA+CGG 0.475058 3:+62816576 None:intergenic
GAAACGGAGTGGAAGAGAAA+AGG 0.475703 3:+62816592 None:intergenic
AAATGCAAGCTTTCGGCAGT+TGG 0.475737 3:+62816395 None:intergenic
ACATTGTTGGGGAGTTCAAA+CGG 0.478433 3:+62812920 None:intergenic
CAATATGTATTGAAGAGTGC+GGG 0.479214 3:-62812496 MsG0380014940.01.T01:CDS
TTGGACTGGAAAACTATTGA+GGG 0.479494 3:-62815469 MsG0380014940.01.T01:CDS
GATTGAGGCAGCTGATATAG+TGG 0.483535 3:-62815272 MsG0380014940.01.T01:CDS
ACTGCCGAAAGCTTGCATTT+GGG 0.489661 3:-62816392 MsG0380014940.01.T01:CDS
TGCGTGTCGGTGACCCGTCT+GGG 0.490168 3:-62816289 MsG0380014940.01.T01:CDS
CATAACGTTGTGGCATTGAT+CGG 0.490352 3:-62816323 MsG0380014940.01.T01:CDS
ATGTTGGTGTTGGAGAGTGC+AGG 0.494067 3:+62816559 None:intergenic
CAATGGGGTAATATAACTGC+TGG 0.495411 3:-62815880 MsG0380014940.01.T01:CDS
GTGATGAGAGGTGGAAGCTC+TGG 0.495807 3:+62812767 None:intergenic
AAGTTACCAAATTTGTTCAT+GGG 0.496359 3:-62815555 MsG0380014940.01.T01:CDS
AACACCATCAGAACAATCTT+GGG 0.501063 3:-62816203 MsG0380014940.01.T01:CDS
AATGCAAGCTTTCGGCAGTT+GGG 0.502532 3:+62816396 None:intergenic
GAGGTGTGAAGAAGAAAGAG+AGG 0.506075 3:+62816616 None:intergenic
GCGACTGAAGCGTTGAGGCC+GGG 0.522001 3:-62815505 MsG0380014940.01.T01:CDS
GGGTGTTAATGTTCAAATTG+GGG 0.524227 3:-62815911 MsG0380014940.01.T01:CDS
GAGGAAGAGATGAAGAGGCC+TGG 0.525789 3:-62815616 MsG0380014940.01.T01:CDS
AACCTAACAACATCAGCATC+CGG 0.526560 3:+62815685 None:intergenic
TGATGAGATAGTGAAGTTGG+AGG 0.529410 3:-62815635 MsG0380014940.01.T01:CDS
GATACTGGCCAAGAAGTTGA+TGG 0.532181 3:-62812521 MsG0380014940.01.T01:CDS
AGTAGGTTCAATGATGGCTA+AGG 0.544395 3:-62816037 MsG0380014940.01.T01:intron
GTTGGACTGGAAAACTATTG+AGG 0.545813 3:-62815470 MsG0380014940.01.T01:CDS
TAGTGAAAATAAGAGGATTG+AGG 0.546248 3:-62815287 MsG0380014940.01.T01:CDS
AAACACTAGACCTATCAATT+GGG 0.547347 3:-62813135 MsG0380014940.01.T01:CDS
TTTACTTATCAGTTATTGCA+AGG 0.547882 3:-62815964 MsG0380014940.01.T01:CDS
TCCAACTTTGTCTCAGATCC+CGG 0.548872 3:+62815487 None:intergenic
AAGACTAAACCTTCTTCCGA+AGG 0.553513 3:-62813074 MsG0380014940.01.T01:CDS
GCAGTATTAGGCACATATCC+AGG 0.555860 3:+62815598 None:intergenic
GCCGGGATCTGAGACAAAGT+TGG 0.556041 3:-62815488 MsG0380014940.01.T01:CDS
TCTGTCTTTGGTGAATTGCA+GGG 0.559285 3:-62812804 MsG0380014940.01.T01:CDS
AATGCTTCTGAGGGAATCGT+TGG 0.560260 3:+62816466 None:intergenic
AAGAGGAAATGTTAAACCAT+AGG 0.562252 3:+62815816 None:intergenic
CTCACACTAGATAACTCCTT+CGG 0.563919 3:+62813058 None:intergenic
TGCTAGAGTAGGTTCAATGA+TGG 0.566664 3:-62816043 MsG0380014940.01.T01:intron
GATCTGAGACAAAGTTGGAC+TGG 0.567564 3:-62815483 MsG0380014940.01.T01:CDS
ATCGGAATTCTCGAAGAAAG+AGG 0.569696 3:-62816506 MsG0380014940.01.T01:CDS
TCTAAAAGAATTAGCAACAA+AGG 0.570658 3:-62812699 MsG0380014940.01.T01:CDS
GTATTGAAGAGTGCGGGGTA+CGG 0.571984 3:-62812490 MsG0380014940.01.T01:CDS
ATCTAGTGTGAGATCTATTG+TGG 0.579449 3:-62813047 MsG0380014940.01.T01:CDS
AGTTACCAAATTTGTTCATG+GGG 0.583369 3:-62815554 MsG0380014940.01.T01:CDS
AGTTGGAGGAAGAGATGAAG+AGG 0.584304 3:-62815621 MsG0380014940.01.T01:CDS
ACGACCCAAGATTGTTCTGA+TGG 0.587418 3:+62816199 None:intergenic
AACGTTGTGGCATTGATCGG+TGG 0.594749 3:-62816320 MsG0380014940.01.T01:CDS
AGGTGTGAAGAAGAAAGAGA+GGG 0.599625 3:+62816617 None:intergenic
CAATGCCACAACGTTATGAC+CGG 0.600993 3:+62816328 None:intergenic
ACAGCAAATCTGCTGCGCGT+CGG 0.601569 3:-62815354 MsG0380014940.01.T01:CDS
GAAAACTATTGAGGGGATTG+CGG 0.602369 3:-62815461 MsG0380014940.01.T01:CDS
TTTAACAGCGTGATGAGAGG+TGG 0.602408 3:+62812758 None:intergenic
AACGGAGTGGAAGAGAAAAG+GGG 0.605055 3:+62816594 None:intergenic
GCATTTAACAGCGTGATGAG+AGG 0.616128 3:+62812755 None:intergenic
GCGCGTCGGTTGTTAAAGCA+AGG 0.617517 3:-62815340 MsG0380014940.01.T01:CDS
CCGCTCCGGTCATAACGTTG+TGG 0.618092 3:-62816333 MsG0380014940.01.T01:CDS
TTGATGGAAGCAACATGAAG+AGG 0.618549 3:-62812865 MsG0380014940.01.T01:CDS
TCGGAATTCTCGAAGAAAGA+GGG 0.619551 3:-62816505 MsG0380014940.01.T01:CDS
CAAACCACTCGAAATGTCAT+CGG 0.621062 3:-62816524 MsG0380014940.01.T01:CDS
ATAAAACGTCGACATTGTTG+GGG 0.624006 3:+62812909 None:intergenic
CAACGTTATGACCGGAGCGG+CGG 0.624768 3:+62816336 None:intergenic
GAGGCAGCTGATATAGTGGA+TGG 0.626682 3:-62815268 MsG0380014940.01.T01:intron
GTTGTTCTTGTGAAACGGAG+TGG 0.628582 3:+62816581 None:intergenic
AAGAGATTGGAATCTGAACA+AGG 0.631435 3:-62816003 MsG0380014940.01.T01:CDS
AAATTCGGTAAGTCAGAGGA+TGG 0.632365 3:-62815772 MsG0380014940.01.T01:CDS
AAGATATTGCAGGTAGAAGG+TGG 0.636964 3:-62815841 MsG0380014940.01.T01:CDS
TTGATGTTGAAACTTTGGAG+AGG 0.637770 3:-62816244 MsG0380014940.01.T01:CDS
TTAGGGCGACTGAAGCGTTG+AGG 0.638976 3:-62815510 MsG0380014940.01.T01:CDS
AATTCCGATGACATTTCGAG+TGG 0.640824 3:+62816520 None:intergenic
TACGAAATTCGGTAAGTCAG+AGG 0.642084 3:-62815776 MsG0380014940.01.T01:CDS
TGTTTGATGAAATGCTTCTG+AGG 0.642685 3:+62816456 None:intergenic
AAAGTTTCAACATCAAGCTG+AGG 0.647451 3:+62816251 None:intergenic
AACAACATCAGCATCCGGAA+CGG 0.648171 3:+62815690 None:intergenic
TGGACTGGAAAACTATTGAG+GGG 0.648535 3:-62815468 MsG0380014940.01.T01:CDS
AACTATTGAGGGGATTGCGG+AGG 0.649646 3:-62815458 MsG0380014940.01.T01:CDS
TGCCTAATACTGCTCAGCGG+AGG 0.652315 3:-62815588 MsG0380014940.01.T01:CDS
GGAGTGGAAGAGAAAAGGGG+AGG 0.653001 3:+62816597 None:intergenic
GTTTGATGAAATGCTTCTGA+GGG 0.654100 3:+62816457 None:intergenic
GGTGTTAATGTTCAAATTGG+GGG 0.656721 3:-62815910 MsG0380014940.01.T01:CDS
TCAATATGTATTGAAGAGTG+CGG 0.657861 3:-62812497 MsG0380014940.01.T01:CDS
GCACCCTTAAAAGTCTACTG+TGG 0.662552 3:-62816425 MsG0380014940.01.T01:CDS
GGTGGCGCGACAGTGCGTGT+CGG 0.665787 3:-62816302 MsG0380014940.01.T01:CDS
TTATAAGGAGATAACATCGA+CGG 0.669042 3:+62815733 None:intergenic
TCATAAGCTAAAGAACAAGA+CGG 0.675342 3:+62815430 None:intergenic
AATATGTATTGAAGAGTGCG+GGG 0.705813 3:-62812495 MsG0380014940.01.T01:CDS
CGTCGGTTGTTAAAGCAAGG+AGG 0.723269 3:-62815337 MsG0380014940.01.T01:CDS
CCACAACGTTATGACCGGAG+CGG 0.752480 3:+62816333 None:intergenic
ATGTGCCTAATACTGCTCAG+CGG 0.765814 3:-62815591 MsG0380014940.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATTTAAATAAGATATTT+AGG + Chr3:62814784-62814803 None:intergenic 10.0%
!!! TAGTTTTATTTGTTTTTTAT+AGG + Chr3:62815071-62815090 None:intergenic 10.0%
!! AAATACTGATAAAACTTATA+AGG + Chr3:62813440-62813459 None:intergenic 15.0%
!! AAGCTGTTAAAAAAATTAAT+AGG - Chr3:62814693-62814712 MsG0380014940.01.T01:intron 15.0%
!! AATAAGATATTTAGGTAATT+TGG + Chr3:62814776-62814795 None:intergenic 15.0%
!! ATAAGATATTTAGGTAATTT+GGG + Chr3:62814775-62814794 None:intergenic 15.0%
!! TTAACCTACTATATATATTA+AGG - Chr3:62815422-62815441 MsG0380014940.01.T01:CDS 15.0%
!!! TCAAATTTTCAAAATATAAG+AGG + Chr3:62814431-62814450 None:intergenic 15.0%
!! AACTTGATATTATTGTAAGT+TGG + Chr3:62815378-62815397 None:intergenic 20.0%
!! AAGTTCTTAAGTTATTTGAA+TGG - Chr3:62814359-62814378 MsG0380014940.01.T01:intron 20.0%
!! ACAAATCAAAAGTAAAATAG+TGG + Chr3:62815303-62815322 None:intergenic 20.0%
!! ACAAGAAAAAAAAAGTTGTT+GGG + Chr3:62815694-62815713 None:intergenic 20.0%
!! ATATGATTATTCTTTGTAGA+GGG - Chr3:62813979-62813998 MsG0380014940.01.T01:intron 20.0%
!! ATATTGCTAATTATCATATC+TGG + Chr3:62815664-62815683 None:intergenic 20.0%
!! CTGGATTAAAATTTATTTCA+AGG - Chr3:62815106-62815125 MsG0380014940.01.T01:intron 20.0%
!! CTTGAATTTAATTGAAAACT+TGG - Chr3:62815976-62815995 MsG0380014940.01.T01:CDS 20.0%
!! GTTACCTTAATATATATAGT+AGG + Chr3:62815429-62815448 None:intergenic 20.0%
!! TAATATATACTCAATGTCAT+TGG + Chr3:62814337-62814356 None:intergenic 20.0%
!! TATATGATTATTCTTTGTAG+AGG - Chr3:62813978-62813997 MsG0380014940.01.T01:intron 20.0%
!! TATATTAAAGCAAGAACAAT+GGG - Chr3:62814563-62814582 MsG0380014940.01.T01:intron 20.0%
!! TTATATTAAAGCAAGAACAA+TGG - Chr3:62814562-62814581 MsG0380014940.01.T01:intron 20.0%
!! TTTGTAATACTTAATCATCA+TGG - Chr3:62815264-62815283 MsG0380014940.01.T01:intron 20.0%
!!! ACATTCAACTCTTTAAATTT+TGG + Chr3:62812991-62813010 None:intergenic 20.0%
!!! CAAGTTTTCAATTAAATTCA+AGG + Chr3:62815978-62815997 None:intergenic 20.0%
!!! GTTTTGAATAATTATGATTG+TGG - Chr3:62813045-62813064 MsG0380014940.01.T01:CDS 20.0%
!!! TTTATTGGATTTTCTGAAAA+GGG - Chr3:62813079-62813098 MsG0380014940.01.T01:CDS 20.0%
!!! TTTGAAAGTTCTTACTTTTT+TGG - Chr3:62813493-62813512 MsG0380014940.01.T01:intron 20.0%
! AATCAAAAGTAAAATAGTGG+AGG + Chr3:62815300-62815319 None:intergenic 25.0%
! AGAGATAGATAATGATGATT+TGG - Chr3:62815212-62815231 MsG0380014940.01.T01:intron 25.0%
! CACAAGAAAAAAAAAGTTGT+TGG + Chr3:62815695-62815714 None:intergenic 25.0%
! CATTAAGAAACTTGAAGAAA+TGG - Chr3:62816324-62816343 MsG0380014940.01.T01:CDS 25.0%
! GCTTCAAAGTTTATTGATAA+TGG + Chr3:62814185-62814204 None:intergenic 25.0%
! TCATTTAGATACAATCATTG+AGG + Chr3:62815451-62815470 None:intergenic 25.0%
! TCTAAAAGAATTAGCAACAA+AGG - Chr3:62816456-62816475 MsG0380014940.01.T01:CDS 25.0%
! TTGATGAAATTAAACGTTGA+TGG - Chr3:62816274-62816293 MsG0380014940.01.T01:CDS 25.0%
! TTGTATTTGTTTCAGAATGA+GGG - Chr3:62813224-62813243 MsG0380014940.01.T01:intron 25.0%
! TTTAAAGAGTTGAATGTGAA+TGG - Chr3:62812994-62813013 MsG0380014940.01.T01:CDS 25.0%
! TTTACTTATCAGTTATTGCA+AGG - Chr3:62813191-62813210 MsG0380014940.01.T01:intron 25.0%
! TTTGTATTTGTTTCAGAATG+AGG - Chr3:62813223-62813242 MsG0380014940.01.T01:intron 25.0%
!! AACAAATTTGGTAACTTCTT+CGG + Chr3:62813597-62813616 None:intergenic 25.0%
!! AAGTTACCAAATTTGTTCAT+GGG - Chr3:62813600-62813619 MsG0380014940.01.T01:intron 25.0%
!! ACATGATATAAACGTTTTAG+AGG - Chr3:62815527-62815546 MsG0380014940.01.T01:CDS 25.0%
!! ACATTTACTCAGACTTTTAA+CGG - Chr3:62816531-62816550 MsG0380014940.01.T01:CDS 25.0%
!!! AACTTTTTTTTTCTTGTGTG+AGG - Chr3:62815697-62815716 MsG0380014940.01.T01:CDS 25.0%
!!! ATAGATAATGATGATTTGGT+TGG - Chr3:62815216-62815235 MsG0380014940.01.T01:intron 25.0%
!!! GTTTATTGGATTTTCTGAAA+AGG - Chr3:62813078-62813097 MsG0380014940.01.T01:CDS 25.0%
!!! TCTCCATTTTTAAAAGTTTG+CGG - Chr3:62815614-62815633 MsG0380014940.01.T01:CDS 25.0%
AAAAGTGATGGTACGAAATT+CGG - Chr3:62813368-62813387 MsG0380014940.01.T01:intron 30.0%
AAACACTAGACCTATCAATT+GGG - Chr3:62816020-62816039 MsG0380014940.01.T01:CDS 30.0%
AAGAGGAAATGTTAAACCAT+AGG + Chr3:62813342-62813361 None:intergenic 30.0%
AATAAAACGTCGACATTGTT+GGG + Chr3:62816250-62816269 None:intergenic 30.0%
AGAAATGGAAATTCTGTCTT+TGG - Chr3:62816339-62816358 MsG0380014940.01.T01:CDS 30.0%
AGTGATCATTACAACAAACA+CGG - Chr3:62814848-62814867 MsG0380014940.01.T01:intron 30.0%
ATATTGAACCATCAACTTCT+TGG + Chr3:62816645-62816664 None:intergenic 30.0%
ATCTGCAGGAAAAAAGAATA+AGG - Chr3:62813925-62813944 MsG0380014940.01.T01:intron 30.0%
ATGTAATGAAAGTAAGACAC+TGG + Chr3:62814124-62814143 None:intergenic 30.0%
ATTGATTAGGAAGATATTGC+AGG - Chr3:62813304-62813323 MsG0380014940.01.T01:intron 30.0%
ATTGTGGAGTTGAAGATTTA+TGG - Chr3:62816124-62816143 MsG0380014940.01.T01:intron 30.0%
CATCAAACAAGTGTGTTTAT+CGG - Chr3:62814071-62814090 MsG0380014940.01.T01:intron 30.0%
GAGTAGATAGTGAAAATAAG+AGG - Chr3:62813861-62813880 MsG0380014940.01.T01:intron 30.0%
TAGTGAAAATAAGAGGATTG+AGG - Chr3:62813868-62813887 MsG0380014940.01.T01:intron 30.0%
TATTGATGAGATAGTGAAGT+TGG - Chr3:62813517-62813536 MsG0380014940.01.T01:intron 30.0%
TCAATATGTATTGAAGAGTG+CGG - Chr3:62816658-62816677 MsG0380014940.01.T01:CDS 30.0%
TCATAAGCTAAAGAACAAGA+CGG + Chr3:62813728-62813747 None:intergenic 30.0%
TGCTTGTGATATTTGTAACT+TGG - Chr3:62814157-62814176 MsG0380014940.01.T01:intron 30.0%
TGTAATGAAAGTAAGACACT+GGG + Chr3:62814123-62814142 None:intergenic 30.0%
TGTTCTTGAAGCAAAATTTG+TGG + Chr3:62812473-62812492 None:intergenic 30.0%
TTATAAGGAGATAACATCGA+CGG + Chr3:62813425-62813444 None:intergenic 30.0%
TTCTATGTTACAAACGATAC+TGG - Chr3:62816619-62816638 MsG0380014940.01.T01:CDS 30.0%
TTGCATTTGGGCAATTTATT+GGG - Chr3:62812775-62812794 MsG0380014940.01.T01:CDS 30.0%
! AATCCACAGTAGACTTTTAA+GGG + Chr3:62812736-62812755 None:intergenic 30.0%
! AGGGTGTTAATGTTCAAATT+GGG - Chr3:62813243-62813262 MsG0380014940.01.T01:intron 30.0%
! AGTTACCAAATTTGTTCATG+GGG - Chr3:62813601-62813620 MsG0380014940.01.T01:intron 30.0%
! GAAGTTACCAAATTTGTTCA+TGG - Chr3:62813599-62813618 MsG0380014940.01.T01:intron 30.0%
! GTGGAAAGAGTTTAGTTTAT+TGG - Chr3:62813064-62813083 MsG0380014940.01.T01:CDS 30.0%
! TTTTTATAGGCAAATGCTAG+TGG + Chr3:62815058-62815077 None:intergenic 30.0%
!! AAATCCTATTGGTTTCATGT+AGG + Chr3:62815017-62815036 None:intergenic 30.0%
!! AATCCTATTGGTTTCATGTA+GGG + Chr3:62815016-62815035 None:intergenic 30.0%
!! ACACCGCAAACTTTTAAAAA+TGG + Chr3:62815620-62815639 None:intergenic 30.0%
!! TAACTTAACATCGCTGTTTT+CGG - Chr3:62816426-62816445 MsG0380014940.01.T01:CDS 30.0%
!!! ACTTTTGATTTGTATCATCC+TGG - Chr3:62815310-62815329 MsG0380014940.01.T01:CDS 30.0%
!!! GGTGGAGTTTATTTTTTACT+TGG - Chr3:62815237-62815256 MsG0380014940.01.T01:intron 30.0%
!!! TCTTTTTTCCTGCAGATAAA+AGG + Chr3:62813922-62813941 None:intergenic 30.0%
AAACACCATCAGAACAATCT+TGG - Chr3:62812951-62812970 MsG0380014940.01.T01:CDS 35.0%
AAAGTTTCAACATCAAGCTG+AGG + Chr3:62812907-62812926 None:intergenic 35.0%
AACACCATCAGAACAATCTT+GGG - Chr3:62812952-62812971 MsG0380014940.01.T01:CDS 35.0%
AAGAGATTGGAATCTGAACA+AGG - Chr3:62813152-62813171 MsG0380014940.01.T01:intron 35.0%
ACTCAGTAACAGCTTGAATT+TGG - Chr3:62816504-62816523 MsG0380014940.01.T01:CDS 35.0%
AGGAAAAAAGAATAAGGTGC+TGG - Chr3:62813931-62813950 MsG0380014940.01.T01:intron 35.0%
AGTCTAGGGATGAATATTGT+TGG + Chr3:62814460-62814479 None:intergenic 35.0%
ATAAAACGTCGACATTGTTG+GGG + Chr3:62816249-62816268 None:intergenic 35.0%
ATCAGTATACTGATGCTACA+AGG + Chr3:62814980-62814999 None:intergenic 35.0%
ATCTAGTGTGAGATCTATTG+TGG - Chr3:62816108-62816127 MsG0380014940.01.T01:intron 35.0%
ATCTTCCCCATGAACAAATT+TGG + Chr3:62813609-62813628 None:intergenic 35.0%
ATTAAAGCAAGAACAATGGG+TGG - Chr3:62814566-62814585 MsG0380014940.01.T01:intron 35.0%
CAAACACTAGACCTATCAAT+TGG - Chr3:62816019-62816038 MsG0380014940.01.T01:CDS 35.0%
CAAGATTATAACCGCAGTTA+TGG - Chr3:62815559-62815578 MsG0380014940.01.T01:CDS 35.0%
CAATAAAACGTCGACATTGT+TGG + Chr3:62816251-62816270 None:intergenic 35.0%
CTTATGTTGAAGTGAGTGTT+TGG - Chr3:62814386-62814405 MsG0380014940.01.T01:intron 35.0%
CTTGCATTTGGGCAATTTAT+TGG - Chr3:62812774-62812793 MsG0380014940.01.T01:CDS 35.0%
GAATTAGCAACAAAGGTGAT+TGG - Chr3:62816463-62816482 MsG0380014940.01.T01:CDS 35.0%
GGGTGTTAATGTTCAAATTG+GGG - Chr3:62813244-62813263 MsG0380014940.01.T01:intron 35.0%
GGTGTTAATGTTCAAATTGG+GGG - Chr3:62813245-62813264 MsG0380014940.01.T01:intron 35.0%
GTTACTGAGTGAAATGTGTT+TGG + Chr3:62816494-62816513 None:intergenic 35.0%
GTTTGATGAAATGCTTCTGA+GGG + Chr3:62812701-62812720 None:intergenic 35.0%
TCAGCTTGATGTTGAAACTT+TGG - Chr3:62812906-62812925 MsG0380014940.01.T01:CDS 35.0%
TGTTTGATGAAATGCTTCTG+AGG + Chr3:62812702-62812721 None:intergenic 35.0%
TTTCCTTGCATGACATTGAT+TGG - Chr3:62815132-62815151 MsG0380014940.01.T01:intron 35.0%
TTTGAAGATGCCCAATTGAT+AGG + Chr3:62816033-62816052 None:intergenic 35.0%
! AAAGTTCTCCTTTTATCTGC+AGG - Chr3:62813911-62813930 MsG0380014940.01.T01:intron 35.0%
! AAATTTGTTCATGGGGAAGA+TGG - Chr3:62813608-62813627 MsG0380014940.01.T01:intron 35.0%
! AATATGTATTGAAGAGTGCG+GGG - Chr3:62816660-62816679 MsG0380014940.01.T01:CDS 35.0%
! ACTTTGGAGAGGAATACTTT+AGG - Chr3:62812922-62812941 MsG0380014940.01.T01:CDS 35.0%
! CAATATGTATTGAAGAGTGC+GGG - Chr3:62816659-62816678 MsG0380014940.01.T01:CDS 35.0%
! CCTCTTTTGTTGAAAAGTGA+TGG - Chr3:62813356-62813375 MsG0380014940.01.T01:intron 35.0%
! CTTTCAATGTTTTTCCCAGA+CGG + Chr3:62812883-62812902 None:intergenic 35.0%
! GAATCCACAGTAGACTTTTA+AGG + Chr3:62812737-62812756 None:intergenic 35.0%
! GCTTGGTTTGAAATAGATTC+TGG - Chr3:62815159-62815178 MsG0380014940.01.T01:intron 35.0%
! GTTGATCTTTCTGTTTCTTC+TGG - Chr3:62813770-62813789 MsG0380014940.01.T01:intron 35.0%
! GTTGGTAAATATGCTAGAGT+AGG - Chr3:62813101-62813120 MsG0380014940.01.T01:CDS 35.0%
! TTCCTTGCATGACATTGATT+GGG - Chr3:62815133-62815152 MsG0380014940.01.T01:intron 35.0%
! TTGATGTTGAAACTTTGGAG+AGG - Chr3:62812911-62812930 MsG0380014940.01.T01:CDS 35.0%
! TTGGACTGGAAAACTATTGA+GGG - Chr3:62813686-62813705 MsG0380014940.01.T01:intron 35.0%
! TTTCAATGTTTTTCCCAGAC+GGG + Chr3:62812882-62812901 None:intergenic 35.0%
!! CCATCACTTTTCAACAAAAG+AGG + Chr3:62813359-62813378 None:intergenic 35.0%
!! CGATGTTTTGAATCAGTCTT+TGG - Chr3:62813748-62813767 MsG0380014940.01.T01:intron 35.0%
!! GAGGGTGTTAATGTTCAAAT+TGG - Chr3:62813242-62813261 MsG0380014940.01.T01:intron 35.0%
!! GATAATGATGATTTGGTTGG+TGG - Chr3:62815219-62815238 MsG0380014940.01.T01:intron 35.0%
!! TAGTGGTTAATTTGTCACGA+GGG + Chr3:62815041-62815060 None:intergenic 35.0%
!! TTGGATTTTCTGAAAAGGGT+TGG - Chr3:62813083-62813102 MsG0380014940.01.T01:CDS 35.0%
!!! TCAGTATTTTTTCTCCGTTC+CGG - Chr3:62813451-62813470 MsG0380014940.01.T01:intron 35.0%
AAACGGAGTGGAAGAGAAAA+GGG + Chr3:62812565-62812584 None:intergenic 40.0%
AAATTCGGTAAGTCAGAGGA+TGG - Chr3:62813383-62813402 MsG0380014940.01.T01:intron 40.0%
AAATTGGGGGTAGTGATCAA+TGG - Chr3:62813258-62813277 MsG0380014940.01.T01:intron 40.0%
AACCCAATCAATGTCATGCA+AGG + Chr3:62815138-62815157 None:intergenic 40.0%
AACCTAACAACATCAGCATC+CGG + Chr3:62813473-62813492 None:intergenic 40.0%
AACTTGGACTTAAGCAGTAC+AGG - Chr3:62815992-62816011 MsG0380014940.01.T01:CDS 40.0%
AAGACTAAACCTTCTTCCGA+AGG - Chr3:62816081-62816100 MsG0380014940.01.T01:intron 40.0%
AAGATATTGCAGGTAGAAGG+TGG - Chr3:62813314-62813333 MsG0380014940.01.T01:intron 40.0%
AATGTGCTAGCATGTAGCAA+GGG - Chr3:62815841-62815860 MsG0380014940.01.T01:CDS 40.0%
AATTCCGATGACATTTCGAG+TGG + Chr3:62812638-62812657 None:intergenic 40.0%
AATTGGGGGTAGTGATCAAT+GGG - Chr3:62813259-62813278 MsG0380014940.01.T01:intron 40.0%
ACATTGTTGGGGAGTTCAAA+CGG + Chr3:62816238-62816257 None:intergenic 40.0%
AGGAAGATATTGCAGGTAGA+AGG - Chr3:62813311-62813330 MsG0380014940.01.T01:intron 40.0%
AGGTGTGAAGAAGAAAGAGA+GGG + Chr3:62812541-62812560 None:intergenic 40.0%
AGTAGGTTCAATGATGGCTA+AGG - Chr3:62813118-62813137 MsG0380014940.01.T01:CDS 40.0%
ATCGGAATTCTCGAAGAAAG+AGG - Chr3:62812649-62812668 MsG0380014940.01.T01:CDS 40.0%
ATGGTTTGAACGAAGCTCTT+AGG - Chr3:62813627-62813646 MsG0380014940.01.T01:intron 40.0%
ATTGCCCAAATGCAAGCTTT+CGG + Chr3:62812770-62812789 None:intergenic 40.0%
CAAACCACTCGAAATGTCAT+CGG - Chr3:62812631-62812650 MsG0380014940.01.T01:CDS 40.0%
CAAGTCAAATGTACATGACC+AGG + Chr3:62815331-62815350 None:intergenic 40.0%
CAAGTGTGTTTATCGGTAAC+TGG - Chr3:62814078-62814097 MsG0380014940.01.T01:intron 40.0%
CAATGGGGTAATATAACTGC+TGG - Chr3:62813275-62813294 MsG0380014940.01.T01:intron 40.0%
CTCACACTAGATAACTCCTT+CGG + Chr3:62816100-62816119 None:intergenic 40.0%
CTGCGGTTATAATCTTGTTG+TGG + Chr3:62815556-62815575 None:intergenic 40.0%
CTGCTGGAACTGAATTGATT+AGG - Chr3:62813291-62813310 MsG0380014940.01.T01:intron 40.0%
CTGGTGCGAATAGCTTAATA+GGG - Chr3:62813950-62813969 MsG0380014940.01.T01:intron 40.0%
GAAAACTATTGAGGGGATTG+CGG - Chr3:62813694-62813713 MsG0380014940.01.T01:intron 40.0%
GAAGAAAGAGAGGGTTTGAA+TGG + Chr3:62812532-62812551 None:intergenic 40.0%
GATCCCTACATGAAACCAAT+AGG - Chr3:62815010-62815029 MsG0380014940.01.T01:intron 40.0%
TACGAAATTCGGTAAGTCAG+AGG - Chr3:62813379-62813398 MsG0380014940.01.T01:intron 40.0%
TAGATAACTCCTTCGGAAGA+AGG + Chr3:62816093-62816112 None:intergenic 40.0%
TCGGAATTCTCGAAGAAAGA+GGG - Chr3:62812650-62812669 MsG0380014940.01.T01:CDS 40.0%
TCTGTCTTTGGTGAATTGCA+GGG - Chr3:62816351-62816370 MsG0380014940.01.T01:CDS 40.0%
TGATGAGATAGTGAAGTTGG+AGG - Chr3:62813520-62813539 MsG0380014940.01.T01:intron 40.0%
TGCACTACGATGTCAAAATC+AGG - Chr3:62815817-62815836 MsG0380014940.01.T01:CDS 40.0%
TGCAGGTTGTTCTTGTGAAA+CGG + Chr3:62812582-62812601 None:intergenic 40.0%
TGCTAGAGTAGGTTCAATGA+TGG - Chr3:62813112-62813131 MsG0380014940.01.T01:CDS 40.0%
TGGTTTGAACGAAGCTCTTA+GGG - Chr3:62813628-62813647 MsG0380014940.01.T01:intron 40.0%
TTCTGTCTTTGGTGAATTGC+AGG - Chr3:62816350-62816369 MsG0380014940.01.T01:CDS 40.0%
TTGATGGAAGCAACATGAAG+AGG - Chr3:62816290-62816309 MsG0380014940.01.T01:CDS 40.0%
TTGTAATGATCACTCAGCAG+TGG + Chr3:62814842-62814861 None:intergenic 40.0%
! AGTGTTGTACCTTTTGTGAC+TGG - Chr3:62815751-62815770 MsG0380014940.01.T01:CDS 40.0%
! ATGACATTTCGAGTGGTTTG+AGG + Chr3:62812631-62812650 None:intergenic 40.0%
! ATTGGTTTCATGTAGGGATC+TGG + Chr3:62815010-62815029 None:intergenic 40.0%
! GTTGGACTGGAAAACTATTG+AGG - Chr3:62813685-62813704 MsG0380014940.01.T01:intron 40.0%
! TGACATTGATTGGGTTTGCT+TGG - Chr3:62815142-62815161 MsG0380014940.01.T01:intron 40.0%
! TGGACTGGAAAACTATTGAG+GGG - Chr3:62813687-62813706 MsG0380014940.01.T01:intron 40.0%
! TTTTTCTTGTGTGAGGTCAC+AGG - Chr3:62815704-62815723 MsG0380014940.01.T01:CDS 40.0%
!! CATAACGTTGTGGCATTGAT+CGG - Chr3:62812832-62812851 MsG0380014940.01.T01:CDS 40.0%
!! CTAGTGGTTAATTTGTCACG+AGG + Chr3:62815042-62815061 None:intergenic 40.0%
!! GACTTTTAAGGGTGCATTGA+TGG + Chr3:62812725-62812744 None:intergenic 40.0%
!! GGAAAGTGTTAGGAAGAGAT+TGG - Chr3:62813139-62813158 MsG0380014940.01.T01:CDS 40.0%
!! TGATGGCTAAGGAAAGTGTT+AGG - Chr3:62813129-62813148 MsG0380014940.01.T01:CDS 40.0%
!! TTTGAGGTTGTTGGTGATGT+TGG + Chr3:62812615-62812634 None:intergenic 40.0%
!!! CTGTGAGTTTGTTTTGTGCT+CGG - Chr3:62814013-62814032 MsG0380014940.01.T01:intron 40.0%
AAATGCAAGCTTTCGGCAGT+TGG + Chr3:62812763-62812782 None:intergenic 45.0%
AACAACATCAGCATCCGGAA+CGG + Chr3:62813468-62813487 None:intergenic 45.0%
AACGGAGTGGAAGAGAAAAG+GGG + Chr3:62812564-62812583 None:intergenic 45.0%
AACTGCCGAAAGCTTGCATT+TGG - Chr3:62812762-62812781 MsG0380014940.01.T01:CDS 45.0%
AAGATCAGTGTGCAGAAGTC+TGG - Chr3:62815937-62815956 MsG0380014940.01.T01:CDS 45.0%
AATGCAAGCTTTCGGCAGTT+GGG + Chr3:62812762-62812781 None:intergenic 45.0%
ACACTCTTTCTCCAAACAGG+AGG - Chr3:62815778-62815797 MsG0380014940.01.T01:CDS 45.0%
ACGACCCAAGATTGTTCTGA+TGG + Chr3:62812959-62812978 None:intergenic 45.0%
ACTCTTTCTCCAAACAGGAG+GGG - Chr3:62815780-62815799 MsG0380014940.01.T01:CDS 45.0%
ACTGCCGAAAGCTTGCATTT+GGG - Chr3:62812763-62812782 MsG0380014940.01.T01:CDS 45.0%
AGTCAGAGGATGGTGCAATT+TGG - Chr3:62813393-62813412 MsG0380014940.01.T01:intron 45.0%
AGTGTAGGACCAGTCACAAA+AGG + Chr3:62815763-62815782 None:intergenic 45.0%
AGTTGGAGGAAGAGATGAAG+AGG - Chr3:62813534-62813553 MsG0380014940.01.T01:intron 45.0%
ATGTGCCTAATACTGCTCAG+CGG - Chr3:62813564-62813583 MsG0380014940.01.T01:intron 45.0%
ATTGGGGGTAGTGATCAATG+GGG - Chr3:62813260-62813279 MsG0380014940.01.T01:intron 45.0%
CAAAGCTACGAGCTGTTTGA+TGG - Chr3:62816169-62816188 MsG0380014940.01.T01:CDS 45.0%
CAATGCCACAACGTTATGAC+CGG + Chr3:62812830-62812849 None:intergenic 45.0%
CAATGTGCTAGCATGTAGCA+AGG - Chr3:62815840-62815859 MsG0380014940.01.T01:CDS 45.0%
CACTCTTTCTCCAAACAGGA+GGG - Chr3:62815779-62815798 MsG0380014940.01.T01:CDS 45.0%
CATTGTTGGGGAGTTCAAAC+GGG + Chr3:62816237-62816256 None:intergenic 45.0%
CCAACCTTGAACGAAGTCTA+GGG + Chr3:62814474-62814493 None:intergenic 45.0%
CCTACACTCTTTCTCCAAAC+AGG - Chr3:62815775-62815794 MsG0380014940.01.T01:CDS 45.0%
GAAACGGAGTGGAAGAGAAA+AGG + Chr3:62812566-62812585 None:intergenic 45.0%
GAGGTGTGAAGAAGAAAGAG+AGG + Chr3:62812542-62812561 None:intergenic 45.0%
GATACAGTCGACCATAACTG+CGG + Chr3:62815573-62815592 None:intergenic 45.0%
GATACTGGCCAAGAAGTTGA+TGG - Chr3:62816634-62816653 MsG0380014940.01.T01:CDS 45.0%
GATTGAGGCAGCTGATATAG+TGG - Chr3:62813883-62813902 MsG0380014940.01.T01:intron 45.0%
GCACCCTTAAAAGTCTACTG+TGG - Chr3:62812730-62812749 MsG0380014940.01.T01:CDS 45.0%
GCAGTATTAGGCACATATCC+AGG + Chr3:62813560-62813579 None:intergenic 45.0%
GCAGTTATGGTCGACTGTAT+CGG - Chr3:62815572-62815591 MsG0380014940.01.T01:CDS 45.0%
GCATTTAACAGCGTGATGAG+AGG + Chr3:62816403-62816422 None:intergenic 45.0%
GCTGGTGCGAATAGCTTAAT+AGG - Chr3:62813949-62813968 MsG0380014940.01.T01:intron 45.0%
GTCACGAGGGAAAATCCTAT+TGG + Chr3:62815028-62815047 None:intergenic 45.0%
GTGTCTTCGCACAAAACAGA+TGG + Chr3:62815901-62815920 None:intergenic 45.0%
GTTGTTCTTGTGAAACGGAG+TGG + Chr3:62812577-62812596 None:intergenic 45.0%
TCATCCCTAGACTTCGTTCA+AGG - Chr3:62814467-62814486 MsG0380014940.01.T01:intron 45.0%
TCCAACCTTGAACGAAGTCT+AGG + Chr3:62814475-62814494 None:intergenic 45.0%
TCCAACTTTGTCTCAGATCC+CGG + Chr3:62813671-62813690 None:intergenic 45.0%
TGGGTCTCATTGTTCTCTCT+TGG - Chr3:62812794-62812813 MsG0380014940.01.T01:CDS 45.0%
TTCCGGATGCTGATGTTGTT+AGG - Chr3:62813468-62813487 MsG0380014940.01.T01:intron 45.0%
TTTAACAGCGTGATGAGAGG+TGG + Chr3:62816400-62816419 None:intergenic 45.0%
! AACAGATGGAGAAAGAGTGC+AGG + Chr3:62815887-62815906 None:intergenic 45.0%
! AATGCTTCTGAGGGAATCGT+TGG + Chr3:62812692-62812711 None:intergenic 45.0%
! CCTGTTTGGAGAAAGAGTGT+AGG + Chr3:62815778-62815797 None:intergenic 45.0%
! GATCTGAGACAAAGTTGGAC+TGG - Chr3:62813672-62813691 MsG0380014940.01.T01:intron 45.0%
! TAACTGGCAGCCTTTTTGCT+TGG - Chr3:62814094-62814113 MsG0380014940.01.T01:intron 45.0%
! TTCGAGTGGTTTGAGGTTGT+TGG + Chr3:62812624-62812643 None:intergenic 45.0%
!! GTTGTTGGTGATGTTGGTGT+TGG + Chr3:62812609-62812628 None:intergenic 45.0%
AACTATTGAGGGGATTGCGG+AGG - Chr3:62813697-62813716 MsG0380014940.01.T01:intron 50.0%
ACGGTTATTGCACGCATTGC+AGG - Chr3:62814867-62814886 MsG0380014940.01.T01:intron 50.0%
CACTGGGACACCAAGCAAAA+AGG + Chr3:62814107-62814126 None:intergenic 50.0%
CAGGTAGAAGGTGGTACCTA+TGG - Chr3:62813323-62813342 MsG0380014940.01.T01:intron 50.0%
CCCTAGACTTCGTTCAAGGT+TGG - Chr3:62814471-62814490 MsG0380014940.01.T01:intron 50.0%
CTCTTTCTCCAAACAGGAGG+GGG - Chr3:62815781-62815800 MsG0380014940.01.T01:CDS 50.0%
GATCACTCAGCAGTGGAGAA+AGG + Chr3:62814835-62814854 None:intergenic 50.0%
TTGGCTTCATCTTGCTGCAG+TGG - Chr3:62814405-62814424 MsG0380014940.01.T01:intron 50.0%
! ACTAGCTTGCGTGTGTCTTC+TGG - Chr3:62815087-62815106 MsG0380014940.01.T01:intron 50.0%
! CGTCGGTTGTTAAAGCAAGG+AGG - Chr3:62813818-62813837 MsG0380014940.01.T01:intron 50.0%
! CTGGTGAGTGCTACTACTAC+TGG - Chr3:62815178-62815197 MsG0380014940.01.T01:intron 50.0%
! GAGGCAGCTGATATAGTGGA+TGG - Chr3:62813887-62813906 MsG0380014940.01.T01:intron 50.0%
! GTATTGAAGAGTGCGGGGTA+CGG - Chr3:62816665-62816684 MsG0380014940.01.T01:CDS 50.0%
!! AACGTTGTGGCATTGATCGG+TGG - Chr3:62812835-62812854 MsG0380014940.01.T01:CDS 50.0%
!! ATGTTGGTGTTGGAGAGTGC+AGG + Chr3:62812599-62812618 None:intergenic 50.0%
ACAGCAAATCTGCTGCGCGT+CGG - Chr3:62813801-62813820 MsG0380014940.01.T01:intron 55.0%
AGCCTCCGCTGAGCAGTATT+AGG + Chr3:62813572-62813591 None:intergenic 55.0%
CAGATACACCCCCTCCTGTT+TGG + Chr3:62815792-62815811 None:intergenic 55.0%
CCACAACGTTATGACCGGAG+CGG + Chr3:62812825-62812844 None:intergenic 55.0%
GAGGAAGAGATGAAGAGGCC+TGG - Chr3:62813539-62813558 MsG0380014940.01.T01:intron 55.0%
GGAGTGGAAGAGAAAAGGGG+AGG + Chr3:62812561-62812580 None:intergenic 55.0%
GTGATGAGAGGTGGAAGCTC+TGG + Chr3:62816391-62816410 None:intergenic 55.0%
TGCCTAATACTGCTCAGCGG+AGG - Chr3:62813567-62813586 MsG0380014940.01.T01:intron 55.0%
! GCCGGGATCTGAGACAAAGT+TGG - Chr3:62813667-62813686 MsG0380014940.01.T01:intron 55.0%
!! GCGCGTCGGTTGTTAAAGCA+AGG - Chr3:62813815-62813834 MsG0380014940.01.T01:intron 55.0%
!! TTAGGGCGACTGAAGCGTTG+AGG - Chr3:62813645-62813664 MsG0380014940.01.T01:intron 55.0%
CAACGTTATGACCGGAGCGG+CGG + Chr3:62812822-62812841 None:intergenic 60.0%
CCGCTCCGGTCATAACGTTG+TGG - Chr3:62812822-62812841 MsG0380014940.01.T01:CDS 60.0%
CTCTCTTGGTTCCGCCGCTC+CGG - Chr3:62812808-62812827 MsG0380014940.01.T01:CDS 65.0%
! TGCGTGTCGGTGACCCGTCT+GGG - Chr3:62812866-62812885 MsG0380014940.01.T01:CDS 65.0%
!! GCGACTGAAGCGTTGAGGCC+GGG - Chr3:62813650-62813669 MsG0380014940.01.T01:intron 65.0%
!! GGCGACTGAAGCGTTGAGGC+CGG - Chr3:62813649-62813668 MsG0380014940.01.T01:intron 65.0%
GGTGGCGCGACAGTGCGTGT+CGG - Chr3:62812853-62812872 MsG0380014940.01.T01:CDS 70.0%
! GTGCGTGTCGGTGACCCGTC+TGG - Chr3:62812865-62812884 MsG0380014940.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 62812466 62816711 62812466 ID=MsG0380014940.01;Name=MsG0380014940.01
Chr3 mRNA 62812466 62816711 62812466 ID=MsG0380014940.01.T01;Parent=MsG0380014940.01;Name=MsG0380014940.01.T01;_AED=0.48;_eAED=0.66;_QI=0|0|0|1|1|1|3|0|677
Chr3 exon 62816162 62816711 62816162 ID=MsG0380014940.01.T01:exon:29645;Parent=MsG0380014940.01.T01
Chr3 exon 62815269 62816054 62815269 ID=MsG0380014940.01.T01:exon:29644;Parent=MsG0380014940.01.T01
Chr3 exon 62812466 62813163 62812466 ID=MsG0380014940.01.T01:exon:29643;Parent=MsG0380014940.01.T01
Chr3 CDS 62816162 62816711 62816162 ID=MsG0380014940.01.T01:cds;Parent=MsG0380014940.01.T01
Chr3 CDS 62815269 62816054 62815269 ID=MsG0380014940.01.T01:cds;Parent=MsG0380014940.01.T01
Chr3 CDS 62812466 62813163 62812466 ID=MsG0380014940.01.T01:cds;Parent=MsG0380014940.01.T01
Gene Sequence

>MsG0380014940.01.T01

ATGGCCACAAATTTTGCTTCAAGAACAATTTTCTTCTCTCATTCTATCAAACTCTTAATCTTTCCATTCAAACCCTCTCTTTCTTCTTCACACCTCCCCTTTTCTCTTCCACTCCGTTTCACAAGAACAACCTGCACTCTCCAACACCAACATCACCAACAACCTCAAACCACTCGAAATGTCATCGGAATTCTCGAAGAAAGAGGGTTATTAGACTCATTAACCAACGATTCCCTCAGAAGCATTTCATCAAACACCATCAATGCACCCTTAAAAGTCTACTGTGGATTCGACCCAACTGCCGAAAGCTTGCATTTGGGCAATTTATTGGGTCTCATTGTTCTCTCTTGGTTCCGCCGCTCCGGTCATAACGTTGTGGCATTGATCGGTGGCGCGACAGTGCGTGTCGGTGACCCGTCTGGGAAAAACATTGAAAGACCTCAGCTTGATGTTGAAACTTTGGAGAGGAATACTTTAGGCATTGAAAACACCATCAGAACAATCTTGGGTCGTTCTCAAAATCCAAAATTTAAAGAGTTGAATGTGAATGGTTCAATGATGGCTAAGGAAAGTGTTAGGAAGAGATTGGAATCTGAACAAGGAATGAGTTATACTGAATTTACTTATCAGTTATTGCAAGGTTATGATTTTTTGTATTTGTTTCAGAATGAGGGTGTTAATGTTCAAATTGGGGGTAGTGATCAATGGGGTAATATAACTGCTGGAACTGAATTGATTAGGAAGATATTGCAGGTAGAAGGTGGTACCTATGGTTTAACATTTCCTCTTTTGTTGAAAAGTGATGGTACGAAATTCGGTAAGTCAGAGGATGGTGCAATTTGGTTGTCTCCGTCGATGTTATCTCCTTATAAGTTTTATCAGTATTTTTTCTCCGTTCCGGATGCTGATGTTGTTAGGTTTTTGAAAGTTCTTACTTTTTTGGATATTGATGAGATAGTGAAGTTGGAGGAAGAGATGAAGAGGCCTGGATATGTGCCTAATACTGCTCAGCGGAGGCTTGCCGAAGAAGTTACCAAATTTGTTCATGGGGAAGATGGTTTGAACGAAGCTCTTAGGGCGACTGAAGCGTTGAGGCCGGGATCTGAGACAAAGTTGGACTGGAAAACTATTGAGGGGATTGCGGAGGATGTTCCGTCTTGTTCTTTAGCTTATGACGATGTTTTGAATCAGTCTTTGGTTGATCTTTCTGTTTCTTCTGGTTTGTTTGACAGCAAATCTGCTGCGCGTCGGTTGTTAAAGCAAGGAGGTGTTTACTTGAATAACAGCAGAGTAGATAGTGAAAATAAGAGGATTGAGGCAGCTGATATAGTGGATGGAATTCAAACACTAGACCTATCAATTGGGCATCTTCAAAAACTCAAACGACTTAATCTAGAGTGTTTAAGACTAAACCTTCTTCCGAAGGAGTTATCTAGTGTGAGATCTATTGTGGAGTTGAAGATTTATGGCAGTAGACTAATAGTTGAGAAACAAAGCTACGAGCTGTTTGATGGCTTACGATCACTACTAATACTACATAAGAAAGATTTTAGAAACCCGTTTGAACTCCCCAACAATGTCGACGTTTTATTGAAGTTGATGAAATTAAACGTTGATGGAAGCAACATGAAGAGGTTGACTCAAAGCATTAAGAAACTTGAAGAAATGGAAATTCTGTCTTTGGTGAATTGCAGGGAGCTTGTGTGCATACCAGAGCTTCCACCTCTCATCACGCTGTTAAATGCAGTTAACTTAACATCGCTGTTTTCGGTGTCAAATCTAAAAGAATTAGCAACAAAGGTGATTGGAAAAACCAAACACATTTCACTCAGTAACAGCTTGAATTTGGATAGACATTTACTCAGACTTTTAACGGAAAGTCTCAATTTAACAATGATGAGTGCTGTGTTTCATAATGTGTTTGTAAGAAGATTTGTTGAGTTCTATGTTACAAACGATACTGGCCAAGAAGTTGATGGTTCAATATGTATTGAAGAGTGCGGGGTACGGCTAGTAAGTGTTGAAGAATTGTAA

Protein sequence

>MsG0380014940.01.T01

MATNFASRTIFFSHSIKLLIFPFKPSLSSSHLPFSLPLRFTRTTCTLQHQHHQQPQTTRNVIGILEERGLLDSLTNDSLRSISSNTINAPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRSGHNVVALIGGATVRVGDPSGKNIERPQLDVETLERNTLGIENTIRTILGRSQNPKFKELNVNGSMMAKESVRKRLESEQGMSYTEFTYQLLQGYDFLYLFQNEGVNVQIGGSDQWGNITAGTELIRKILQVEGGTYGLTFPLLLKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLKVLTFLDIDEIVKLEEEMKRPGYVPNTAQRRLAEEVTKFVHGEDGLNEALRATEALRPGSETKLDWKTIEGIAEDVPSCSLAYDDVLNQSLVDLSVSSGLFDSKSAARRLLKQGGVYLNNSRVDSENKRIEAADIVDGIQTLDLSIGHLQKLKRLNLECLRLNLLPKELSSVRSIVELKIYGSRLIVEKQSYELFDGLRSLLILHKKDFRNPFELPNNVDVLLKLMKLNVDGSNMKRLTQSIKKLEEMEILSLVNCRELVCIPELPPLITLLNAVNLTSLFSVSNLKELATKVIGKTKHISLSNSLNLDRHLLRLLTESLNLTMMSAVFHNVFVRRFVEFYVTNDTGQEVDGSICIEECGVRLVSVEEL*