AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023098.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023098.01.T01 MTR_8g086630 86.239 327 30 5 1 322 1 317 0.0 546
MsG0480023098.01.T01 MTR_4g086490 77.003 287 27 6 1 282 1 253 2.20e-134 410
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023098.01.T01 AT3G19810 63.710 248 82 5 74 321 75 314 7.74e-103 305
MsG0480023098.01.T01 AT3G19810 63.710 248 82 5 74 321 75 314 7.74e-103 305

Find 61 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAATTCAGTATGTGATTC+TGG 0.271880 4:+80847131 MsG0480023098.01.T01:CDS
CCTCAATTTCTTCTTCTTCC+TGG 0.279746 4:-80842770 None:intergenic
GTGGTTCTTCAGTGAGTAAA+AGG 0.321200 4:-80846917 None:intergenic
TCATCACGCTTATGTGTAAT+AGG 0.323398 4:+80842815 MsG0480023098.01.T01:CDS
ATAGTCTCTGGTTCATTAAC+AGG 0.341261 4:-80846939 None:intergenic
TTCCATTGAGAGAAACAAAA+AGG 0.348900 4:-80842307 None:intergenic
TGAAGATGCACTAATTGATT+TGG 0.358713 4:+80847025 MsG0480023098.01.T01:CDS
CTTTGTAAAACAAGACATAT+TGG 0.361239 4:+80842403 MsG0480023098.01.T01:CDS
TTTGCTACAGCTGCAATTGC+CGG 0.362751 4:-80847195 None:intergenic
ATTGCAAGAAAATGTTGTTA+TGG 0.373717 4:-80842347 None:intergenic
AAGGCACAGTGTCCTTTGAT+TGG 0.380524 4:+80842503 MsG0480023098.01.T01:CDS
AAGAAGAAATTGAGGCTTGA+TGG 0.392126 4:+80842778 MsG0480023098.01.T01:CDS
TGTTAATGAACCAGAGACTA+TGG 0.398499 4:+80846941 MsG0480023098.01.T01:CDS
GAGGAAAGCTTTGGCCCACT+TGG 0.410018 4:+80847230 MsG0480023098.01.T01:CDS
GAAGAAATTGATAAAGATGA+AGG 0.421786 4:+80842544 MsG0480023098.01.T01:CDS
CATGTATGCATCAAAATGTA+TGG 0.428669 4:+80842453 MsG0480023098.01.T01:CDS
GAAGTAAAAGAGGAAAGCTT+TGG 0.436034 4:+80847221 MsG0480023098.01.T01:CDS
GAACCAGAGACTATGGATTT+CGG 0.437471 4:+80846948 MsG0480023098.01.T01:CDS
AGAAGAAATTGAGGCTTGAT+GGG 0.452423 4:+80842779 MsG0480023098.01.T01:CDS
GAACAGTTCTATGTTGAAAA+GGG 0.454686 4:-80842378 None:intergenic
GGAACAGTTCTATGTTGAAA+AGG 0.459393 4:-80842379 None:intergenic
AGGCACAGTGTCCTTTGATT+GGG 0.460660 4:+80842504 MsG0480023098.01.T01:CDS
ATCTGAACTGGAGTCCCATT+CGG 0.468773 4:-80842733 None:intergenic
ACATCAATAGAAATCTGAAC+TGG 0.473693 4:-80842745 None:intergenic
TCAATTTGTTTCTCTTCAAG+AGG 0.488439 4:-80847065 None:intergenic
TGCACTACTTTGGAGAGGTT+AGG 0.495564 4:+80842628 MsG0480023098.01.T01:CDS
GAGAATATGCTCTCGGCAGA+TGG 0.505785 4:-80846885 None:intergenic
TAGCAAAGAGGAAGTAAAAG+AGG 0.510851 4:+80847211 MsG0480023098.01.T01:CDS
ACACCGAAATCCATAGTCTC+TGG 0.511153 4:-80846951 None:intergenic
GAAGACAAAATTCCAACCCT+TGG 0.539761 4:+80846984 MsG0480023098.01.T01:CDS
AAAGGAGCTGAAGAGGATGA+AGG 0.540865 4:-80842289 None:intergenic
TGAATTCAGTATGTGATTCT+GGG 0.541883 4:+80847132 MsG0480023098.01.T01:CDS
AAAGGACACTGTGCCTTCCT+CGG 0.545029 4:-80842497 None:intergenic
TTCTTCATAGTCCCAATCAA+AGG 0.549462 4:-80842515 None:intergenic
CCAGGAAGAAGAAGAAATTG+AGG 0.557383 4:+80842770 MsG0480023098.01.T01:CDS
ACTTTGGAGAGGTTAGGTCT+AGG 0.558661 4:+80842634 MsG0480023098.01.T01:CDS
AAGGAGCTGAAGAGGATGAA+GGG 0.560437 4:-80842288 None:intergenic
AGATTTCTATTGATGTTACC+AGG 0.564204 4:+80842752 MsG0480023098.01.T01:CDS
AAGAAATTGATAAAGATGAA+GGG 0.573818 4:+80842545 MsG0480023098.01.T01:CDS
TGGTTCTTCAGTGAGTAAAA+GGG 0.584264 4:-80846916 None:intergenic
CGTGATTTATACACCGAGGA+AGG 0.591548 4:+80842484 MsG0480023098.01.T01:CDS
TGTGGTCAAAACTTTAACAC+CGG 0.593260 4:+80847176 MsG0480023098.01.T01:CDS
GAACTCAGAGAATATGCTCT+CGG 0.593331 4:-80846892 None:intergenic
GAGGATGAAGGGGCTAAAAG+TGG 0.594967 4:-80842277 None:intergenic
TCTATGTTGAAAAGGGGTGA+AGG 0.595890 4:-80842371 None:intergenic
GTCTCTGGTTCATTAACAGG+TGG 0.598843 4:-80846936 None:intergenic
GATGAAGGGTCACCGTGGGA+AGG 0.602100 4:+80842559 MsG0480023098.01.T01:CDS
TATATAACCGCACCTTCCCA+CGG 0.608059 4:-80842571 None:intergenic
GCTCTCTTAGATTTCCAAGT+GGG 0.608668 4:-80847244 None:intergenic
TGCTCTCTTAGATTTCCAAG+TGG 0.611043 4:-80847245 None:intergenic
GCGAACTACGAAAGCAGTGA+AGG 0.615142 4:+80842705 MsG0480023098.01.T01:CDS
AGTATTGCACTACTTTGGAG+AGG 0.618407 4:+80842623 MsG0480023098.01.T01:CDS
AGGGTCACCGTGGGAAGGTG+CGG 0.618932 4:+80842564 MsG0480023098.01.T01:CDS
GTATGTGATTCTGGGTGCAA+AGG 0.624787 4:+80847140 MsG0480023098.01.T01:CDS
AACAGTTCTATGTTGAAAAG+GGG 0.635344 4:-80842377 None:intergenic
AGGAGCTGAAGAGGATGAAG+GGG 0.635760 4:-80842287 None:intergenic
CAATTGCAGCTGTAGCAAAG+AGG 0.644995 4:+80847199 MsG0480023098.01.T01:CDS
TAAAGATGAAGGGTCACCGT+GGG 0.665303 4:+80842555 MsG0480023098.01.T01:CDS
AAAGGTGCGTGCCTGAAATG+TGG 0.693871 4:+80847158 MsG0480023098.01.T01:CDS
ATAAAGATGAAGGGTCACCG+TGG 0.749113 4:+80842554 MsG0480023098.01.T01:CDS
TGATCGTGATTTATACACCG+AGG 0.771445 4:+80842480 MsG0480023098.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAAATGATAATAATTA+AGG + Chr4:80845181-80845200 MsG0480023098.01.T01:intron 10.0%
!! TAATATAATATGATATAACA+GGG - Chr4:80845710-80845729 None:intergenic 10.0%
!!! TTATTTTTTTTTACAAGATT+GGG + Chr4:80844083-80844102 MsG0480023098.01.T01:intron 10.0%
!!! TTTATTTTTTTTTACAAGAT+TGG + Chr4:80844082-80844101 MsG0480023098.01.T01:intron 10.0%
!! CATACTACTTTATTAAAATT+TGG + Chr4:80845565-80845584 MsG0480023098.01.T01:intron 15.0%
!! GTAATATAATATGATATAAC+AGG - Chr4:80845711-80845730 None:intergenic 15.0%
!! TGATTAAACTAAAAACAAAT+CGG - Chr4:80843178-80843197 None:intergenic 15.0%
!!! TATTTTTTTTTACAAGATTG+GGG + Chr4:80844084-80844103 MsG0480023098.01.T01:intron 15.0%
!!! TTTATGATTTTTTTTCTTTC+CGG + Chr4:80846302-80846321 MsG0480023098.01.T01:intron 15.0%
!! AAGAAATTGATAAAGATGAA+GGG + Chr4:80842545-80842564 MsG0480023098.01.T01:CDS 20.0%
!! AATGTGAAACTTCAATTTAA+TGG + Chr4:80843972-80843991 MsG0480023098.01.T01:intron 20.0%
!! AGCAGTAATAAATACTATAA+AGG - Chr4:80845145-80845164 None:intergenic 20.0%
!! ATGAAAATAGAAGAAAGAAT+TGG + Chr4:80846712-80846731 MsG0480023098.01.T01:intron 20.0%
!! TAATAAACTGAGATTGATAA+TGG - Chr4:80846340-80846359 None:intergenic 20.0%
!! TATCATATTATATTACGTGT+TGG + Chr4:80845715-80845734 MsG0480023098.01.T01:intron 20.0%
!! TTCAAAAAACATAAGAGAAA+GGG + Chr4:80847091-80847110 MsG0480023098.01.T01:CDS 20.0%
!! TTTCAAAAAACATAAGAGAA+AGG + Chr4:80847090-80847109 MsG0480023098.01.T01:CDS 20.0%
!!! AATATGTCTTGTTTTACAAA+GGG - Chr4:80842404-80842423 None:intergenic 20.0%
!!! ACAACCAATATCATTTTTTT+AGG - Chr4:80846687-80846706 None:intergenic 20.0%
!!! ATATAATATTAAGAGGTGTT+TGG - Chr4:80845858-80845877 None:intergenic 20.0%
!!! ATTTTTTTTTACAAGATTGG+GGG + Chr4:80844085-80844104 MsG0480023098.01.T01:intron 20.0%
!!! GATTTGTTTTTAGTTTAATC+AGG + Chr4:80843177-80843196 MsG0480023098.01.T01:intron 20.0%
!!! TTAAAATTTGGAGTAATTGA+TGG + Chr4:80845577-80845596 MsG0480023098.01.T01:intron 20.0%
!!! TTCTTTCTTCTATTTTCATA+TGG - Chr4:80846711-80846730 None:intergenic 20.0%
!!! TTCTTTCTTTTATTTTCACA+TGG - Chr4:80846743-80846762 None:intergenic 20.0%
!!! TTTCTTATTCAGCATTTTTT+GGG - Chr4:80843015-80843034 None:intergenic 20.0%
! AAAAAATAAGGCTTCTGTTA+TGG + Chr4:80842678-80842697 MsG0480023098.01.T01:CDS 25.0%
! AAAAATAAGGCTTCTGTTAT+GGG + Chr4:80842679-80842698 MsG0480023098.01.T01:CDS 25.0%
! AAAGTGTATTTCATTGTAGT+AGG - Chr4:80843272-80843291 None:intergenic 25.0%
! AAATATAGACATAGAGTACA+CGG - Chr4:80843660-80843679 None:intergenic 25.0%
! AACAGGGATATAATATTAAG+AGG - Chr4:80845865-80845884 None:intergenic 25.0%
! AACCGATGTTTCAAAAAATA+AGG + Chr4:80842666-80842685 MsG0480023098.01.T01:CDS 25.0%
! AAGTTATGAAGAAGAGAATA+TGG - Chr4:80845934-80845953 None:intergenic 25.0%
! AATAGCATGTAAGAATTCTT+TGG + Chr4:80846396-80846415 MsG0480023098.01.T01:intron 25.0%
! ACAAAAACAATTGGATTTGA+GGG + Chr4:80844988-80845007 MsG0480023098.01.T01:intron 25.0%
! ACAACAATATAGTACATAAG+TGG + Chr4:80844156-80844175 MsG0480023098.01.T01:intron 25.0%
! ACAAGCTATAACTTTCTTTA+AGG - Chr4:80843487-80843506 None:intergenic 25.0%
! ACTATAAAGGATAAACTTCA+TGG - Chr4:80844025-80844044 None:intergenic 25.0%
! AGAGTTAAATGGAAAGATAT+AGG + Chr4:80843908-80843927 MsG0480023098.01.T01:intron 25.0%
! AGCACGACTATTTAAATATA+TGG - Chr4:80843766-80843785 None:intergenic 25.0%
! ATATCTATTCTATACTGTGT+TGG + Chr4:80845680-80845699 MsG0480023098.01.T01:intron 25.0%
! ATTGCAAGAAAATGTTGTTA+TGG - Chr4:80842350-80842369 None:intergenic 25.0%
! CAAGCTATAACTTTCTTTAA+GGG - Chr4:80843486-80843505 None:intergenic 25.0%
! CTTTGTAAAACAAGACATAT+TGG + Chr4:80842403-80842422 MsG0480023098.01.T01:CDS 25.0%
! GAACGATAAAATAAATATCC+AGG - Chr4:80846556-80846575 None:intergenic 25.0%
! GAAGAAATTGATAAAGATGA+AGG + Chr4:80842544-80842563 MsG0480023098.01.T01:CDS 25.0%
! GAATAAAGTAACAAACCAAA+AGG + Chr4:80846648-80846667 MsG0480023098.01.T01:intron 25.0%
! GCACGACTATTTAAATATAT+GGG - Chr4:80843765-80843784 None:intergenic 25.0%
! TCTTATCTTATCTTATCACA+AGG + Chr4:80845807-80845826 MsG0480023098.01.T01:intron 25.0%
!! AAATTGTTGTCTCCTTTTAA+AGG - Chr4:80845255-80845274 None:intergenic 25.0%
!! AATTGTTGTCTCCTTTTAAA+GGG - Chr4:80845254-80845273 None:intergenic 25.0%
!! ACTACAATGAAATACACTTT+TGG + Chr4:80843272-80843291 MsG0480023098.01.T01:intron 25.0%
!! TTTCTTAATGCTGTTTGAAA+TGG - Chr4:80843240-80843259 None:intergenic 25.0%
!!! ACCACAGAAATTTTAACATT+TGG - Chr4:80842935-80842954 None:intergenic 25.0%
!!! AGACAACAATTTTTTTCAAG+AGG + Chr4:80845263-80845282 MsG0480023098.01.T01:intron 25.0%
!!! AGCCTTATTTTTTGAAACAT+CGG - Chr4:80842671-80842690 None:intergenic 25.0%
!!! ATAATGGATTACTATTGTTC+CGG - Chr4:80846324-80846343 None:intergenic 25.0%
!!! ATATGTCTTGTTTTACAAAG+GGG - Chr4:80842403-80842422 None:intergenic 25.0%
!!! ATCATCAACTGGTTTTAAAT+CGG - Chr4:80843353-80843372 None:intergenic 25.0%
!!! CAATATGTCTTGTTTTACAA+AGG - Chr4:80842405-80842424 None:intergenic 25.0%
!!! CACAGAAATTTTAACATTTG+GGG - Chr4:80842933-80842952 None:intergenic 25.0%
!!! CCACAGAAATTTTAACATTT+GGG - Chr4:80842934-80842953 None:intergenic 25.0%
!!! CTTTCTTATTCAGCATTTTT+TGG - Chr4:80843016-80843035 None:intergenic 25.0%
!!! GACAACAATTTTTTTCAAGA+GGG + Chr4:80845264-80845283 MsG0480023098.01.T01:intron 25.0%
!!! TTTGTTTTCGTTTTTGATAC+AGG - Chr4:80844637-80844656 None:intergenic 25.0%
!!! TTTTTTTTTACAAGATTGGG+GGG + Chr4:80844086-80844105 MsG0480023098.01.T01:intron 25.0%
AAATAAACTCATGCTTTCAG+TGG - Chr4:80843721-80843740 None:intergenic 30.0%
AACAGTTCTATGTTGAAAAG+GGG - Chr4:80842380-80842399 None:intergenic 30.0%
ACAAACCAATCATATCAAGA+AGG - Chr4:80846282-80846301 None:intergenic 30.0%
ACATCAATAGAAATCTGAAC+TGG - Chr4:80842748-80842767 None:intergenic 30.0%
AGAAGAAATAATCTATCCTG+TGG - Chr4:80846807-80846826 None:intergenic 30.0%
AGATTTCTATTGATGTTACC+AGG + Chr4:80842752-80842771 MsG0480023098.01.T01:CDS 30.0%
AGGTTCAAGATCAACAAATT+AGG + Chr4:80844582-80844601 MsG0480023098.01.T01:intron 30.0%
ATAAAGGATAAACTTCATGG+AGG - Chr4:80844022-80844041 None:intergenic 30.0%
ATAGCTCAATATATGAAGCA+TGG - Chr4:80846000-80846019 None:intergenic 30.0%
ATGAATTCAGTATGTGATTC+TGG + Chr4:80847131-80847150 MsG0480023098.01.T01:CDS 30.0%
CAAACCAATCATATCAAGAA+GGG - Chr4:80846281-80846300 None:intergenic 30.0%
CAGGCCTAAAAAAATGATAT+TGG + Chr4:80846680-80846699 MsG0480023098.01.T01:intron 30.0%
CATGTATGCATCAAAATGTA+TGG + Chr4:80842453-80842472 MsG0480023098.01.T01:CDS 30.0%
CATGTCATACACAGTTTATT+TGG - Chr4:80845896-80845915 None:intergenic 30.0%
CCCAAATGTTAAAATTTCTG+TGG + Chr4:80842931-80842950 MsG0480023098.01.T01:intron 30.0%
CTAACAGATTAATTCCCTTT+AGG + Chr4:80846462-80846481 MsG0480023098.01.T01:intron 30.0%
CTATACTGTGTTGTAGTAAA+GGG + Chr4:80845754-80845773 MsG0480023098.01.T01:intron 30.0%
GAACAGTTCTATGTTGAAAA+GGG - Chr4:80842381-80842400 None:intergenic 30.0%
GACAAAAACAATTGGATTTG+AGG + Chr4:80844987-80845006 MsG0480023098.01.T01:intron 30.0%
GCATGAGTTTATTTGATATG+AGG + Chr4:80843727-80843746 MsG0480023098.01.T01:intron 30.0%
TACATCGTGACAAAAACAAT+TGG + Chr4:80844979-80844998 MsG0480023098.01.T01:intron 30.0%
TCTATACTGTGTTGTAGTAA+AGG + Chr4:80845753-80845772 MsG0480023098.01.T01:intron 30.0%
TGAAGATGCACTAATTGATT+TGG + Chr4:80847025-80847044 MsG0480023098.01.T01:CDS 30.0%
TGAATTCAGTATGTGATTCT+GGG + Chr4:80847132-80847151 MsG0480023098.01.T01:CDS 30.0%
TGATGAGATTCACCTATAAA+CGG + Chr4:80845434-80845453 MsG0480023098.01.T01:intron 30.0%
TTATTTGGACAGGTTTAACA+GGG - Chr4:80845881-80845900 None:intergenic 30.0%
TTCATAATAGCTTGGTAAGT+GGG - Chr4:80843691-80843710 None:intergenic 30.0%
TTCCATTGAGAGAAACAAAA+AGG - Chr4:80842310-80842329 None:intergenic 30.0%
TTTATTTGGACAGGTTTAAC+AGG - Chr4:80845882-80845901 None:intergenic 30.0%
TTTGAAAGAGTCCCTTTAAA+AGG + Chr4:80845240-80845259 MsG0480023098.01.T01:intron 30.0%
! AATCAACTTTTCACACTAGA+AGG - Chr4:80845100-80845119 None:intergenic 30.0%
! ACACTGATGTTTTCTTGTTA+CGG - Chr4:80843426-80843445 None:intergenic 30.0%
! CATACTCCTACATTTTTAAC+CGG + Chr4:80845458-80845477 MsG0480023098.01.T01:intron 30.0%
! GCACAAGGTTTAAAATATGA+TGG - Chr4:80845836-80845855 None:intergenic 30.0%
! GTTATAGCTTGTGATTATAG+TGG + Chr4:80843495-80843514 MsG0480023098.01.T01:intron 30.0%
! TCAAGAGGGTCTTATATTTA+GGG + Chr4:80845278-80845297 MsG0480023098.01.T01:intron 30.0%
! TCAATGTGATTTTCTGTTGA+AGG + Chr4:80846853-80846872 MsG0480023098.01.T01:intron 30.0%
! TCAATTTGTTTCTCTTCAAG+AGG - Chr4:80847068-80847087 None:intergenic 30.0%
! TGACATTTAGAGCATCAAAT+AGG + Chr4:80844270-80844289 MsG0480023098.01.T01:intron 30.0%
! TTAGTTGTAGTGTATTTTCC+TGG + Chr4:80846535-80846554 MsG0480023098.01.T01:intron 30.0%
! TTCAAGAGGGTCTTATATTT+AGG + Chr4:80845277-80845296 MsG0480023098.01.T01:intron 30.0%
! TTTTAGCAAAACTAACAGGA+CGG - Chr4:80843089-80843108 None:intergenic 30.0%
!! TAAAGTTTTGACCACATTTC+AGG - Chr4:80847172-80847191 None:intergenic 30.0%
!! TAATTTGTTGATCTTGAACC+TGG - Chr4:80844583-80844602 None:intergenic 30.0%
!! TAGTTTTGCTAAAACCATGT+AGG + Chr4:80843095-80843114 MsG0480023098.01.T01:intron 30.0%
!! TTTTGAGTATTGCACTACTT+TGG + Chr4:80842618-80842637 MsG0480023098.01.T01:CDS 30.0%
!! TTTTTCCTGGATTTGAGATT+TGG - Chr4:80844560-80844579 None:intergenic 30.0%
!!! AATTGTTTTTGTCACGATGT+AGG - Chr4:80844980-80844999 None:intergenic 30.0%
!!! AGTTGTTGTTTTTTAGAGAG+AGG + Chr4:80845038-80845057 MsG0480023098.01.T01:intron 30.0%
!!! ATGGATTTCGGTGTTATTTT+TGG + Chr4:80846960-80846979 MsG0480023098.01.T01:CDS 30.0%
!!! ATGGTTTTAGCAAAACTAAC+AGG - Chr4:80843093-80843112 None:intergenic 30.0%
!!! GGTTGTTTTTGTGGTTTTTT+GGG - Chr4:80844123-80844142 None:intergenic 30.0%
!!! TATCATTTTTTTAGGCCTGA+CGG - Chr4:80846679-80846698 None:intergenic 30.0%
!!! TGGATTTCGGTGTTATTTTT+GGG + Chr4:80846961-80846980 MsG0480023098.01.T01:CDS 30.0%
!!! TTTTTGAAACATCGGTTGAA+AGG - Chr4:80842663-80842682 None:intergenic 30.0%
AAGAAGAAATTGAGGCTTGA+TGG + Chr4:80842778-80842797 MsG0480023098.01.T01:CDS 35.0%
AAGACACTATAGAACATGCA+AGG - Chr4:80846781-80846800 None:intergenic 35.0%
AAGATCCAAATCTCAAATCC+AGG + Chr4:80844552-80844571 MsG0480023098.01.T01:intron 35.0%
AATATATGAAGCATGGAGAG+TGG - Chr4:80845993-80846012 None:intergenic 35.0%
AATCCGAGAGAACTAGTAAA+AGG + Chr4:80844907-80844926 MsG0480023098.01.T01:intron 35.0%
AGAACCAAGCAATTAGTTGT+TGG + Chr4:80845633-80845652 MsG0480023098.01.T01:intron 35.0%
AGAAGAAATTGAGGCTTGAT+GGG + Chr4:80842779-80842798 MsG0480023098.01.T01:CDS 35.0%
AGTCGTTAAACATAGAACTC+GGG - Chr4:80846231-80846250 None:intergenic 35.0%
ATACACTACAACTAAGCAAG+TGG - Chr4:80846530-80846549 None:intergenic 35.0%
ATCCGAGAGAACTAGTAAAA+GGG + Chr4:80844908-80844927 MsG0480023098.01.T01:intron 35.0%
ATGCAACATTCCATGTAAAG+AGG - Chr4:80845662-80845681 None:intergenic 35.0%
ATGGTCAATAGACCTTATAG+AGG + Chr4:80846120-80846139 MsG0480023098.01.T01:intron 35.0%
ATTGGATTTGAGGGAAGAAA+AGG + Chr4:80844997-80845016 MsG0480023098.01.T01:intron 35.0%
ATTTGAGGGAAGAAAAGGAA+AGG + Chr4:80845002-80845021 MsG0480023098.01.T01:intron 35.0%
ATTTGTCTCTCAGATCTAGT+GGG - Chr4:80844812-80844831 None:intergenic 35.0%
CAACTTCCGGTTAAAAATGT+AGG - Chr4:80845467-80845486 None:intergenic 35.0%
CACATTCGCAAAAGCAATAA+AGG - Chr4:80843958-80843977 None:intergenic 35.0%
CACTTACCAAGCTATTATGA+AGG + Chr4:80843690-80843709 MsG0480023098.01.T01:intron 35.0%
CAGACCGAGTAAGAAATAAA+GGG - Chr4:80843532-80843551 None:intergenic 35.0%
CAGTCAGCTTAAGAGTTAAA+TGG + Chr4:80843897-80843916 MsG0480023098.01.T01:intron 35.0%
CAGTCGTTAAACATAGAACT+CGG - Chr4:80846232-80846251 None:intergenic 35.0%
CATACACAGTTTATTTGGAC+AGG - Chr4:80845891-80845910 None:intergenic 35.0%
CATTTAACTCTTAAGCTGAC+TGG - Chr4:80843899-80843918 None:intergenic 35.0%
CTATGAGAATTGAGAGAATG+AGG + Chr4:80846583-80846602 MsG0480023098.01.T01:intron 35.0%
CTTATGCTCTTATCATCAAC+TGG - Chr4:80843364-80843383 None:intergenic 35.0%
CTTCATAATAGCTTGGTAAG+TGG - Chr4:80843692-80843711 None:intergenic 35.0%
GAAGTAAAAGAGGAAAGCTT+TGG + Chr4:80847221-80847240 MsG0480023098.01.T01:CDS 35.0%
GAAGTTGAGTTTGCATTTGA+TGG + Chr4:80845480-80845499 MsG0480023098.01.T01:intron 35.0%
GATGTCTGTAAATGGTTACA+AGG - Chr4:80843621-80843640 None:intergenic 35.0%
GCTATTATCACACCAAAATC+AGG - Chr4:80846382-80846401 None:intergenic 35.0%
GGAACAGTTCTATGTTGAAA+AGG - Chr4:80842382-80842401 None:intergenic 35.0%
GTTGTATGTGTCTCAAAACA+TGG + Chr4:80843147-80843166 MsG0480023098.01.T01:intron 35.0%
TAGCAAAGAGGAAGTAAAAG+AGG + Chr4:80847211-80847230 MsG0480023098.01.T01:CDS 35.0%
TATCACACCAAAATCAGGTT+TGG - Chr4:80846377-80846396 None:intergenic 35.0%
TATTTGTATCGTAGAGTCTG+AGG + Chr4:80846090-80846109 MsG0480023098.01.T01:intron 35.0%
TCAAATGCAAACTCAACTTC+CGG - Chr4:80845480-80845499 None:intergenic 35.0%
TCAGACCGAGTAAGAAATAA+AGG - Chr4:80843533-80843552 None:intergenic 35.0%
TCATCACGCTTATGTGTAAT+AGG + Chr4:80842815-80842834 MsG0480023098.01.T01:CDS 35.0%
TCCGTGTTAGTGAATGTTTA+GGG - Chr4:80844196-80844215 None:intergenic 35.0%
TGGTCAATAGACCTTATAGA+GGG + Chr4:80846121-80846140 MsG0480023098.01.T01:intron 35.0%
TGGTTCTTCAGTGAGTAAAA+GGG - Chr4:80846919-80846938 None:intergenic 35.0%
TGTATTTCATTGTAGTAGGC+AGG - Chr4:80843268-80843287 None:intergenic 35.0%
TGTGGTCAAAACTTTAACAC+CGG + Chr4:80847176-80847195 MsG0480023098.01.T01:CDS 35.0%
TGTTAATGAACCAGAGACTA+TGG + Chr4:80846941-80846960 MsG0480023098.01.T01:CDS 35.0%
TTCAGAATGTATGGTGTAAC+TGG + Chr4:80846155-80846174 MsG0480023098.01.T01:intron 35.0%
TTCTTCATAGTCCCAATCAA+AGG - Chr4:80842518-80842537 None:intergenic 35.0%
TTGACCCTTCTTGATATGAT+TGG + Chr4:80846274-80846293 MsG0480023098.01.T01:intron 35.0%
TTGCCATAGATTAATCCTTC+AGG + Chr4:80842907-80842926 MsG0480023098.01.T01:intron 35.0%
TTTAGCAAAACTAACAGGAC+GGG - Chr4:80843088-80843107 None:intergenic 35.0%
! AGTGCCCTTTATTTCTTACT+CGG + Chr4:80843525-80843544 MsG0480023098.01.T01:intron 35.0%
! ATAGTCTCTGGTTCATTAAC+AGG - Chr4:80846942-80846961 None:intergenic 35.0%
! TCTATAGTGTCTTATTCCAC+AGG + Chr4:80846788-80846807 MsG0480023098.01.T01:intron 35.0%
! TGGATTTGAGATTTGGATCT+TGG - Chr4:80844553-80844572 None:intergenic 35.0%
! TGTTTCTACTTTGCACTACA+TGG + Chr4:80845529-80845548 MsG0480023098.01.T01:intron 35.0%
!! AAACCAATTTTGGGTGTCAA+GGG - Chr4:80843050-80843069 None:intergenic 35.0%
!! AGTAGTCTTATCGAACCTTA+TGG - Chr4:80844474-80844493 None:intergenic 35.0%
!! CTCCTTTTTGTTTCTCTCAA+TGG + Chr4:80842305-80842324 MsG0480023098.01.T01:CDS 35.0%
!! GCAAGATGCAGTTTTAACAA+TGG + Chr4:80845776-80845795 MsG0480023098.01.T01:intron 35.0%
!!! GGATTTCGGTGTTATTTTTG+GGG + Chr4:80846962-80846981 MsG0480023098.01.T01:CDS 35.0%
!!! GGGTTGTTTTTGTGGTTTTT+TGG - Chr4:80844124-80844143 None:intergenic 35.0%
!!! TAACGACTGTTGCTTTTCTT+TGG + Chr4:80846243-80846262 MsG0480023098.01.T01:intron 35.0%
!!! TTTTTGTGGTTTTTTGGGTC+AGG - Chr4:80844118-80844137 None:intergenic 35.0%
AACCGAATTGCAAAAAGACG+TGG + Chr4:80844245-80844264 MsG0480023098.01.T01:intron 40.0%
AAGCAAGCTAAAAGCCCTTT+CGG + Chr4:80844352-80844371 MsG0480023098.01.T01:intron 40.0%
AAGTAACAAACCAAAAGGCG+TGG + Chr4:80846653-80846672 MsG0480023098.01.T01:intron 40.0%
ACAACTAAGCAAGTGGACAA+TGG - Chr4:80846523-80846542 None:intergenic 40.0%
ACAGATCAGCAATGAAGCTA+AGG - Chr4:80845351-80845370 None:intergenic 40.0%
ACCAAATACGAACCGAAACA+CGG + Chr4:80844384-80844403 MsG0480023098.01.T01:intron 40.0%
ATTCCAACCCTTGGAAAAAG+TGG + Chr4:80846993-80847012 MsG0480023098.01.T01:CDS 40.0%
ATTGCATCTAGACGCCTAAA+GGG - Chr4:80846479-80846498 None:intergenic 40.0%
CAAGGAACGATGTCTGTAAA+TGG - Chr4:80843629-80843648 None:intergenic 40.0%
CCAGGAAGAAGAAGAAATTG+AGG + Chr4:80842770-80842789 MsG0480023098.01.T01:CDS 40.0%
CCTCAATTTCTTCTTCTTCC+TGG - Chr4:80842773-80842792 None:intergenic 40.0%
GAAACAAAAAGGAGCTGAAG+AGG - Chr4:80842299-80842318 None:intergenic 40.0%
GAAACCATTCATTGCAACAC+AGG - Chr4:80843805-80843824 None:intergenic 40.0%
GAACCAGAGACTATGGATTT+CGG + Chr4:80846948-80846967 MsG0480023098.01.T01:CDS 40.0%
GAACTAGTAAAAGGGTGGTA+CGG + Chr4:80844916-80844935 MsG0480023098.01.T01:intron 40.0%
GAACTCAGAGAATATGCTCT+CGG - Chr4:80846895-80846914 None:intergenic 40.0%
GAAGACAAAATTCCAACCCT+TGG + Chr4:80846984-80847003 MsG0480023098.01.T01:CDS 40.0%
GACACCAACAACTAATTGCT+TGG - Chr4:80845640-80845659 None:intergenic 40.0%
GATTTGTCTCTCAGATCTAG+TGG - Chr4:80844813-80844832 None:intergenic 40.0%
GCCCTAAACATTCACTAACA+CGG + Chr4:80844192-80844211 MsG0480023098.01.T01:intron 40.0%
GCTCTCTTAGATTTCCAAGT+GGG - Chr4:80847247-80847266 None:intergenic 40.0%
GTCCGTGTTAGTGAATGTTT+AGG - Chr4:80844197-80844216 None:intergenic 40.0%
GTCGTTAAACATAGAACTCG+GGG - Chr4:80846230-80846249 None:intergenic 40.0%
GTCTTATCGAACCTTATGGA+TGG - Chr4:80844470-80844489 None:intergenic 40.0%
GTGGTTCTTCAGTGAGTAAA+AGG - Chr4:80846920-80846939 None:intergenic 40.0%
GTGTAACTGGACTTAAATGC+TGG + Chr4:80846168-80846187 MsG0480023098.01.T01:intron 40.0%
GTTCAGCCTTCATAATAGCT+TGG - Chr4:80843699-80843718 None:intergenic 40.0%
GTTGTATGACACTGAAAGCA+AGG + Chr4:80845605-80845624 MsG0480023098.01.T01:intron 40.0%
TACAGGAAGCTGAAGATTGT+TGG - Chr4:80844620-80844639 None:intergenic 40.0%
TATTGTTGTATCACCCGTCT+CGG - Chr4:80844145-80844164 None:intergenic 40.0%
TCATGGAGGTAGTAGATACT+GGG - Chr4:80844008-80844027 None:intergenic 40.0%
TCGTTAAACATAGAACTCGG+GGG - Chr4:80846229-80846248 None:intergenic 40.0%
TCTATGTTGAAAAGGGGTGA+AGG - Chr4:80842374-80842393 None:intergenic 40.0%
TCTCAAATCCAGGAAAAACC+AGG + Chr4:80844562-80844581 MsG0480023098.01.T01:intron 40.0%
TGAAATGGAGCAGAAACTCT+TGG - Chr4:80843225-80843244 None:intergenic 40.0%
TGATCAGCATGATTCCTACA+TGG - Chr4:80843112-80843131 None:intergenic 40.0%
TGATCGTGATTTATACACCG+AGG + Chr4:80842480-80842499 MsG0480023098.01.T01:CDS 40.0%
TGCTCTCTTAGATTTCCAAG+TGG - Chr4:80847248-80847267 None:intergenic 40.0%
TGGAACAACAAGATCTTCAC+CGG + Chr4:80844748-80844767 MsG0480023098.01.T01:intron 40.0%
TGTCCTAAAGTTGCTCGAAA+GGG - Chr4:80844527-80844546 None:intergenic 40.0%
TTCATGGAGGTAGTAGATAC+TGG - Chr4:80844009-80844028 None:intergenic 40.0%
TTGTCACGATGTAGGATCTT+TGG - Chr4:80844972-80844991 None:intergenic 40.0%
! AGTATTGCACTACTTTGGAG+AGG + Chr4:80842623-80842642 MsG0480023098.01.T01:CDS 40.0%
! CAGTGAAGGATTTTCCGAAT+GGG + Chr4:80842719-80842738 MsG0480023098.01.T01:CDS 40.0%
! CTCCACGTCTTTTTGCAATT+CGG - Chr4:80844250-80844269 None:intergenic 40.0%
! CTGATGTTTTCTTGTTACGG+AGG - Chr4:80843423-80843442 None:intergenic 40.0%
! GTAGGAGTATGTCCGTTTAT+AGG - Chr4:80845449-80845468 None:intergenic 40.0%
! TAGAGCATCAAATAGGCGTA+TGG + Chr4:80844277-80844296 MsG0480023098.01.T01:intron 40.0%
! TGTTTCGGTTCGTATTTGGT+TGG - Chr4:80844384-80844403 None:intergenic 40.0%
! TTGTTGGTGTCCTCTTTACA+TGG + Chr4:80845649-80845668 MsG0480023098.01.T01:intron 40.0%
!! AACCAATTTTGGGTGTCAAG+GGG - Chr4:80843049-80843068 None:intergenic 40.0%
!! ATCTTGAACCTGGTTTTTCC+TGG - Chr4:80844573-80844592 None:intergenic 40.0%
!! ATTAAGAGGTGTTTGGCACA+AGG - Chr4:80845851-80845870 None:intergenic 40.0%
!! CACCCTTTTACTAGTTCTCT+CGG - Chr4:80844913-80844932 None:intergenic 40.0%
!! GAAACCAATTTTGGGTGTCA+AGG - Chr4:80843051-80843070 None:intergenic 40.0%
!! TTAGCTTGCTTCGTTGTGAA+GGG - Chr4:80844343-80844362 None:intergenic 40.0%
!! TTTAGCTTGCTTCGTTGTGA+AGG - Chr4:80844344-80844363 None:intergenic 40.0%
!! TTTTAACATTTGGGGCCTGA+AGG - Chr4:80842925-80842944 None:intergenic 40.0%
!!! GCGCTTAGTTTTTTAGAGAG+AGG + Chr4:80845066-80845085 MsG0480023098.01.T01:intron 40.0%
!!! TTTGTTTTGTGGGTTTGCGA+CGG - Chr4:80844689-80844708 None:intergenic 40.0%
AAAGATCCGGCGAAACAGTA+CGG + Chr4:80844724-80844743 MsG0480023098.01.T01:intron 45.0%
AAAGGAGCTGAAGAGGATGA+AGG - Chr4:80842292-80842311 None:intergenic 45.0%
AACCCCTTGACACCCAAAAT+TGG + Chr4:80843044-80843063 MsG0480023098.01.T01:intron 45.0%
AAGGAGCTGAAGAGGATGAA+GGG - Chr4:80842291-80842310 None:intergenic 45.0%
AAGGCACAGTGTCCTTTGAT+TGG + Chr4:80842503-80842522 MsG0480023098.01.T01:CDS 45.0%
ACACCGAAATCCATAGTCTC+TGG - Chr4:80846954-80846973 None:intergenic 45.0%
ACCACAAAAACAACCCGAGA+CGG + Chr4:80844128-80844147 MsG0480023098.01.T01:intron 45.0%
ACGCGACGTTTCAGAATGTA+TGG + Chr4:80846146-80846165 MsG0480023098.01.T01:intron 45.0%
AGCAAAGTGGAGGTTACTAG+TGG + Chr4:80846054-80846073 MsG0480023098.01.T01:intron 45.0%
AGCAAGCTAAAAGCCCTTTC+GGG + Chr4:80844353-80844372 MsG0480023098.01.T01:intron 45.0%
AGGAAGCTGAAGATTGTTGG+AGG - Chr4:80844617-80844636 None:intergenic 45.0%
AGGCACAGTGTCCTTTGATT+GGG + Chr4:80842504-80842523 MsG0480023098.01.T01:CDS 45.0%
ATAAAGATGAAGGGTCACCG+TGG + Chr4:80842554-80842573 MsG0480023098.01.T01:CDS 45.0%
ATCTGAACTGGAGTCCCATT+CGG - Chr4:80842736-80842755 None:intergenic 45.0%
ATTGTTGTATCACCCGTCTC+GGG - Chr4:80844144-80844163 None:intergenic 45.0%
CAATTGCAGCTGTAGCAAAG+AGG + Chr4:80847199-80847218 MsG0480023098.01.T01:CDS 45.0%
CACGATGTAGGATCTTTGGA+TGG - Chr4:80844968-80844987 None:intergenic 45.0%
CATTGCATCTAGACGCCTAA+AGG - Chr4:80846480-80846499 None:intergenic 45.0%
CGAGAGAACTAGTAAAAGGG+TGG + Chr4:80844911-80844930 MsG0480023098.01.T01:intron 45.0%
CGGTTCGTATTTGGTTGGAT+AGG - Chr4:80844379-80844398 None:intergenic 45.0%
CGTGATTTATACACCGAGGA+AGG + Chr4:80842484-80842503 MsG0480023098.01.T01:CDS 45.0%
CGTTAAACATAGAACTCGGG+GGG - Chr4:80846228-80846247 None:intergenic 45.0%
CTCGACGTCTTCAGTTACTT+TGG + Chr4:80843384-80843403 MsG0480023098.01.T01:intron 45.0%
CTGTCCTAAAGTTGCTCGAA+AGG - Chr4:80844528-80844547 None:intergenic 45.0%
GATGTAGGATCTTTGGATGG+TGG - Chr4:80844965-80844984 None:intergenic 45.0%
GGAAGCTGAAGATTGTTGGA+GGG - Chr4:80844616-80844635 None:intergenic 45.0%
GGGCCTGAAGGATTAATCTA+TGG - Chr4:80842913-80842932 None:intergenic 45.0%
GTATGTGATTCTGGGTGCAA+AGG + Chr4:80847140-80847159 MsG0480023098.01.T01:CDS 45.0%
TAAAGATGAAGGGTCACCGT+GGG + Chr4:80842555-80842574 MsG0480023098.01.T01:CDS 45.0%
TAAGACTACTACCGCCAACA+CGG + Chr4:80844484-80844503 MsG0480023098.01.T01:intron 45.0%
TAGTAAAAGGGTGGTACGGA+GGG + Chr4:80844920-80844939 MsG0480023098.01.T01:intron 45.0%
TAGTTCTCTCGGATTCTCCA+CGG - Chr4:80844902-80844921 None:intergenic 45.0%
TATATAACCGCACCTTCCCA+CGG - Chr4:80842574-80842593 None:intergenic 45.0%
TGAGGGAAGAAAAGGAAAGG+CGG + Chr4:80845005-80845024 MsG0480023098.01.T01:intron 45.0%
TTCGTTGTGAAGGGAGTTGT+TGG - Chr4:80844334-80844353 None:intergenic 45.0%
TTTGCTACAGCTGCAATTGC+CGG - Chr4:80847198-80847217 None:intergenic 45.0%
! ACTTTGGAGAGGTTAGGTCT+AGG + Chr4:80842634-80842653 MsG0480023098.01.T01:CDS 45.0%
! AGGGGAGAGGAAACCAATTT+TGG - Chr4:80843060-80843079 None:intergenic 45.0%
! CACAACGCCAAACCTGATTT+TGG + Chr4:80846367-80846386 MsG0480023098.01.T01:intron 45.0%
! GCAGAAACTCTTGGCTAGTT+TGG - Chr4:80843216-80843235 None:intergenic 45.0%
! GCAGTGAAGGATTTTCCGAA+TGG + Chr4:80842718-80842737 MsG0480023098.01.T01:CDS 45.0%
! GGGGAGAGGAAACCAATTTT+GGG - Chr4:80843059-80843078 None:intergenic 45.0%
! GTATCGTAGAGTCTGAGGTT+GGG + Chr4:80846095-80846114 MsG0480023098.01.T01:intron 45.0%
! GTCTCTGGTTCATTAACAGG+TGG - Chr4:80846939-80846958 None:intergenic 45.0%
! TCCGTGTTTCGGTTCGTATT+TGG - Chr4:80844388-80844407 None:intergenic 45.0%
! TGCACTACTTTGGAGAGGTT+AGG + Chr4:80842628-80842647 MsG0480023098.01.T01:CDS 45.0%
! TGTATCGTAGAGTCTGAGGT+TGG + Chr4:80846094-80846113 MsG0480023098.01.T01:intron 45.0%
!!! GATCTAGTGGGTTGCTGTTT+TGG - Chr4:80844800-80844819 None:intergenic 45.0%
!!! GTCATCGCCACTTTTTCCAA+GGG - Chr4:80847003-80847022 None:intergenic 45.0%
!! AAAAAAAAAAAATACTATAA+AGG - Chr4:80844038-80844057 None:intergenic 5.0%
!! AAAAAAATGATAATAATTAA+GGG + Chr4:80845182-80845201 MsG0480023098.01.T01:intron 5.0%
AAAGGACACTGTGCCTTCCT+CGG - Chr4:80842500-80842519 None:intergenic 50.0%
AACTAACAGGACGGGAGGAT+AGG - Chr4:80843080-80843099 None:intergenic 50.0%
ACCTTTGCGACTCCGTGTTT+CGG - Chr4:80844399-80844418 None:intergenic 50.0%
ACGTCGCGTTTCCCTCTATA+AGG - Chr4:80846135-80846154 None:intergenic 50.0%
ACTAACAGGACGGGAGGATA+GGG - Chr4:80843079-80843098 None:intergenic 50.0%
AGAAAAGGAAAGGCGGTGGA+AGG + Chr4:80845012-80845031 MsG0480023098.01.T01:intron 50.0%
AGAGAGAGAGAGCAAAGTGG+AGG + Chr4:80846044-80846063 MsG0480023098.01.T01:intron 50.0%
AGCAAAACTAACAGGACGGG+AGG - Chr4:80843085-80843104 None:intergenic 50.0%
AGGAGCTGAAGAGGATGAAG+GGG - Chr4:80842290-80842309 None:intergenic 50.0%
CAAATCCAACGAGTCACACC+AGG + Chr4:80844827-80844846 MsG0480023098.01.T01:intron 50.0%
CCAACAGCACATGAAAACCG+CGG + Chr4:80844438-80844457 MsG0480023098.01.T01:intron 50.0%
CCACAAAAACAACCCGAGAC+GGG + Chr4:80844129-80844148 MsG0480023098.01.T01:intron 50.0%
CCATTCATTGCAACACAGGC+AGG - Chr4:80843801-80843820 None:intergenic 50.0%
CCTGCCTGTGTTGCAATGAA+TGG + Chr4:80843798-80843817 MsG0480023098.01.T01:intron 50.0%
CTAGTAAAAGGGTGGTACGG+AGG + Chr4:80844919-80844938 MsG0480023098.01.T01:intron 50.0%
CTTATGGATGGTATCTGCCG+CGG - Chr4:80844458-80844477 None:intergenic 50.0%
GAGAATATGCTCTCGGCAGA+TGG - Chr4:80846888-80846907 None:intergenic 50.0%
GAGAGAGAGAGAGAGCAAAG+TGG + Chr4:80846041-80846060 MsG0480023098.01.T01:intron 50.0%
GAGGATGAAGGGGCTAAAAG+TGG - Chr4:80842280-80842299 None:intergenic 50.0%
GAGTACACGGCAATCAGACA+AGG - Chr4:80843647-80843666 None:intergenic 50.0%
GATTCTCCACGGTGGTTTCT+CGG - Chr4:80844891-80844910 None:intergenic 50.0%
GCAAAACTCGACGGAAAGGA+AGG + Chr4:80844774-80844793 MsG0480023098.01.T01:intron 50.0%
GCGAACTACGAAAGCAGTGA+AGG + Chr4:80842705-80842724 MsG0480023098.01.T01:CDS 50.0%
TAAAGTTGCTCGAAAGGGCC+AGG - Chr4:80844522-80844541 None:intergenic 50.0%
TAGCCTGCAAGTCAGTTTGC+TGG + Chr4:80843854-80843873 MsG0480023098.01.T01:intron 50.0%
TGAAGGGAGTTGTTGGATCG+TGG - Chr4:80844327-80844346 None:intergenic 50.0%
TGGCCCTTTCGAGCAACTTT+AGG + Chr4:80844521-80844540 MsG0480023098.01.T01:intron 50.0%
TTGGTTGGATAGGCCCGAAA+GGG - Chr4:80844369-80844388 None:intergenic 50.0%
TTTGGTTGGATAGGCCCGAA+AGG - Chr4:80844370-80844389 None:intergenic 50.0%
! AAAGGTGCGTGCCTGAAATG+TGG + Chr4:80847158-80847177 MsG0480023098.01.T01:CDS 50.0%
! AGCCTGCAAGTCAGTTTGCT+GGG + Chr4:80843855-80843874 MsG0480023098.01.T01:intron 50.0%
! GGGAGGGAAGCATATGTAAC+TGG - Chr4:80846195-80846214 None:intergenic 50.0%
! TAGAGTCTGAGGTTGGGTGA+TGG + Chr4:80846101-80846120 MsG0480023098.01.T01:intron 50.0%
!! CGGTTTTCATGTGCTGTTGG+TGG - Chr4:80844438-80844457 None:intergenic 50.0%
!! TTCCCAGCAAACTGACTTGC+AGG - Chr4:80843860-80843879 None:intergenic 50.0%
!!! CGTCATCGCCACTTTTTCCA+AGG - Chr4:80847004-80847023 None:intergenic 50.0%
!!! TCGCCACTTTTTCCAAGGGT+TGG - Chr4:80846999-80847018 None:intergenic 50.0%
AACTCGGGGGGTGACAACAT+TGG - Chr4:80846216-80846235 None:intergenic 55.0%
ACACGGTGCATCTACGAACC+TGG + Chr4:80844501-80844520 MsG0480023098.01.T01:intron 55.0%
ACCGAAACACGGAGTCGCAA+AGG + Chr4:80844395-80844414 MsG0480023098.01.T01:intron 55.0%
ACTCGGGGGGTGACAACATT+GGG - Chr4:80846215-80846234 None:intergenic 55.0%
AGGACCTCGAAAACCCACCA+AGG + Chr4:80844847-80844866 MsG0480023098.01.T01:intron 55.0%
CCACAAAACAAACAGCCCGC+CGG + Chr4:80844697-80844716 MsG0480023098.01.T01:intron 55.0%
CCTCGAAAACCCACCAAGGT+CGG + Chr4:80844851-80844870 MsG0480023098.01.T01:intron 55.0%
CGCGGCAGATACCATCCATA+AGG + Chr4:80844456-80844475 MsG0480023098.01.T01:intron 55.0%
CTAACAGGACGGGAGGATAG+GGG - Chr4:80843078-80843097 None:intergenic 55.0%
GCGTGCAAAACTCGACGGAA+AGG + Chr4:80844770-80844789 MsG0480023098.01.T01:intron 55.0%
GGGAAGAAAAGGAAAGGCGG+TGG + Chr4:80845008-80845027 MsG0480023098.01.T01:intron 55.0%
GGTTCGTAGATGCACCGTGT+TGG - Chr4:80844501-80844520 None:intergenic 55.0%
TCGTAGATGCACCGTGTTGG+CGG - Chr4:80844498-80844517 None:intergenic 55.0%
TTCCAGCCGTACTGTTTCGC+CGG - Chr4:80844733-80844752 None:intergenic 55.0%
TTCTCTCGGATTCTCCACGG+TGG - Chr4:80844899-80844918 None:intergenic 55.0%
! CCGCGGTTTTCATGTGCTGT+TGG - Chr4:80844441-80844460 None:intergenic 55.0%
! GAGGAAAGCTTTGGCCCACT+TGG + Chr4:80847230-80847249 MsG0480023098.01.T01:CDS 55.0%
! TTCCGTCGAGTTTTGCACGC+CGG - Chr4:80844770-80844789 None:intergenic 55.0%
! TTGGATGGTGGTGCGATGAG+TGG - Chr4:80844953-80844972 None:intergenic 55.0%
!!! CCCGTCTCGGGTTGTTTTTG+TGG - Chr4:80844132-80844151 None:intergenic 55.0%
!!! CGGCGGGCTGTTTGTTTTGT+GGG - Chr4:80844699-80844718 None:intergenic 55.0%
!!! TTGGTGGGTTTTCGAGGTCC+TGG - Chr4:80844848-80844867 None:intergenic 55.0%
ATCCGGCGAAACAGTACGGC+TGG + Chr4:80844728-80844747 MsG0480023098.01.T01:intron 60.0%
CAAAACAAACAGCCCGCCGG+CGG + Chr4:80844700-80844719 MsG0480023098.01.T01:intron 60.0%
CACCGGCGTGCAAAACTCGA+CGG + Chr4:80844765-80844784 MsG0480023098.01.T01:intron 60.0%
CGAAAACCCACCAAGGTCGG+CGG + Chr4:80844854-80844873 MsG0480023098.01.T01:intron 60.0%
GAACCTCCGAGAAACCACCG+TGG + Chr4:80844882-80844901 MsG0480023098.01.T01:intron 60.0%
GAGGTCCTGGTGTGACTCGT+TGG - Chr4:80844835-80844854 None:intergenic 60.0%
GATGAAGGGTCACCGTGGGA+AGG + Chr4:80842559-80842578 MsG0480023098.01.T01:CDS 60.0%
GGGGGGTGACAACATTGGGA+GGG - Chr4:80846211-80846230 None:intergenic 60.0%
TCGGTTTCGCGCTCACACGT+GGG - Chr4:80844231-80844250 None:intergenic 60.0%
TCTCCACGGTGGTTTCTCGG+AGG - Chr4:80844888-80844907 None:intergenic 60.0%
TTCGGTTTCGCGCTCACACG+TGG - Chr4:80844232-80844251 None:intergenic 60.0%
TTTCGCCGGATCTTTGCCGC+CGG - Chr4:80844719-80844738 None:intergenic 60.0%
! AACCAAAAGGCGTGGCCGTC+AGG + Chr4:80846661-80846680 MsG0480023098.01.T01:intron 60.0%
! GATGGTGGTGCGATGAGTGG+TGG - Chr4:80844950-80844969 None:intergenic 60.0%
! GTGGTGCGATGAGTGGTGGA+AGG - Chr4:80844946-80844965 None:intergenic 60.0%
!!! CCGACCTTGGTGGGTTTTCG+AGG - Chr4:80844854-80844873 None:intergenic 60.0%
!!! CCGGCGGGCTGTTTGTTTTG+TGG - Chr4:80844700-80844719 None:intergenic 60.0%
AGGACGGGAGGATAGGGGAG+AGG - Chr4:80843073-80843092 None:intergenic 65.0%
AGGGTCACCGTGGGAAGGTG+CGG + Chr4:80842564-80842583 MsG0480023098.01.T01:CDS 65.0%
CGGGGGGTGACAACATTGGG+AGG - Chr4:80846212-80846231 None:intergenic 65.0%
CTGTTGCCGCCGACCTTGGT+GGG - Chr4:80844863-80844882 None:intergenic 65.0%
GGTTCTGTTGCCGCCGACCT+TGG - Chr4:80844867-80844886 None:intergenic 65.0%
TCTGTTGCCGCCGACCTTGG+TGG - Chr4:80844864-80844883 None:intergenic 65.0%
GCGCTCACACGTGGGTTCGC+TGG - Chr4:80844223-80844242 None:intergenic 70.0%
! GGCCTGACGGCCACGCCTTT+TGG - Chr4:80846666-80846685 None:intergenic 70.0%
CGCCGGATCTTTGCCGCCGG+CGG - Chr4:80844716-80844735 None:intergenic 75.0%
GCCCGCCGGCGGCAAAGATC+CGG + Chr4:80844711-80844730 MsG0480023098.01.T01:intron 75.0%
GCCGGATCTTTGCCGCCGGC+GGG - Chr4:80844715-80844734 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 80842274 80847280 80842274 ID=MsG0480023098.01;Name=MsG0480023098.01
Chr4 mRNA 80842274 80847280 80842274 ID=MsG0480023098.01.T01;Parent=MsG0480023098.01;Name=MsG0480023098.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|322
Chr4 exon 80842274 80842836 80842274 ID=MsG0480023098.01.T01:exon:5117;Parent=MsG0480023098.01.T01
Chr4 exon 80846875 80847280 80846875 ID=MsG0480023098.01.T01:exon:5118;Parent=MsG0480023098.01.T01
Chr4 CDS 80842274 80842836 80842274 ID=MsG0480023098.01.T01:cds;Parent=MsG0480023098.01.T01
Chr4 CDS 80846875 80847280 80846875 ID=MsG0480023098.01.T01:cds;Parent=MsG0480023098.01.T01
Gene Sequence

>MsG0480023098.01.T01

ATGCCACTTTTAGCCCCTTCATCCTCTTCAGCTCCTTTTTGTTTCTCTCAATGGAACATTTACAATTCAAATTCCATAACAACATTTTCTTGCAATTCCTTCACCCCTTTTCAACATAGAACTGTTCCCCTTTGTAAAACAAGACATATTGGTATGCATCAAAATCTGTTACACAAACACATGTATGCATCAAAATGTATGGAGAATGATCGTGATTTATACACCGAGGAAGGCACAGTGTCCTTTGATTGGGACTATGAAGAAGAAGAAGAAGAAATTGATAAAGATGAAGGGTCACCGTGGGAAGGTGCGGTTATATACAAGAGAAATGCTGCAATCTTACATTTTGAGTATTGCACTACTTTGGAGAGGTTAGGTCTAGGAAACCTTTCAACCGATGTTTCAAAAAATAAGGCTTCTGTTATGGGATTGCGAACTACGAAAGCAGTGAAGGATTTTCCGAATGGGACTCCAGTTCAGATTTCTATTGATGTTACCAGGAAGAAGAAGAAATTGAGGCTTGATGGGATTATAAAAACTGTCATCACGCTTATGTGTAATAGGTGTTGCATGCCATCTGCCGAGAGCATATTCTCTGAGTTCTCCCTTTTACTCACTGAAGAACCACCTGTTAATGAACCAGAGACTATGGATTTCGGTGTTATTTTTGGGGAAGACAAAATTCCAACCCTTGGAAAAAGTGGCGATGACGATGAAGATGCACTAATTGATTTGGATGATCAATTATATTTTCCTCTTGAAGAGAAACAAATTGACATTTCAAAAAACATAAGAGAAAGGGTGCATCTTGAGATTACAATGAATTCAGTATGTGATTCTGGGTGCAAAGGTGCGTGCCTGAAATGTGGTCAAAACTTTAACACCGGCAATTGCAGCTGTAGCAAAGAGGAAGTAAAAGAGGAAAGCTTTGGCCCACTTGGAAATCTAAGAGAGCAGATGCAATTGTAA

Protein sequence

>MsG0480023098.01.T01

MPLLAPSSSSAPFCFSQWNIYNSNSITTFSCNSFTPFQHRTVPLCKTRHIGMHQNLLHKHMYASKCMENDRDLYTEEGTVSFDWDYEEEEEEIDKDEGSPWEGAVIYKRNAAILHFEYCTTLERLGLGNLSTDVSKNKASVMGLRTTKAVKDFPNGTPVQISIDVTRKKKKLRLDGIIKTVITLMCNRCCMPSAESIFSEFSLLLTEEPPVNEPETMDFGVIFGEDKIPTLGKSGDDDEDALIDLDDQLYFPLEEKQIDISKNIRERVHLEITMNSVCDSGCKGACLKCGQNFNTGNCSCSKEEVKEESFGPLGNLREQMQL*