AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023863.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023863.01.T01 MTR_8g103750 73.597 481 21 6 1 408 226 673 0.0 628
MsG0480023863.01.T01 MTR_8g103750 73.597 481 21 6 1 408 161 608 0.0 628
MsG0480023863.01.T01 MTR_6g086630 39.518 415 138 14 95 407 246 649 3.17e-62 212
MsG0480023863.01.T01 MTR_4g025560 64.407 59 12 2 80 138 87 136 1.45e-12 65.1
MsG0480023863.01.T01 MTR_1g010280 38.655 119 69 3 230 346 445 561 3.56e-12 68.6
MsG0480023863.01.T02 MTR_8g103750 74.242 132 29 1 1 127 1 132 3.54e-59 194
MsG0480023863.01.T02 MTR_6g086630 58.333 132 50 1 1 127 1 132 3.81e-45 155
MsG0480023863.01.T02 MTR_8g103750 100.000 67 0 0 61 127 1 67 1.30e-41 145
MsG0480023863.01.T02 MTR_6g027300 56.471 85 37 0 51 135 55 139 2.61e-28 108
MsG0480023863.01.T02 MTR_6g027300 56.471 85 37 0 51 135 55 139 3.89e-28 108
MsG0480023863.01.T02 MTR_6g027300 56.471 85 37 0 51 135 55 139 4.09e-28 108
MsG0480023863.01.T02 MTR_1g010280 64.179 67 24 0 61 127 1 67 9.28e-25 99.0
MsG0480023863.01.T02 MTR_6g027300 52.000 75 36 0 61 135 1 75 1.52e-21 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023863.01.T01 AT4G13350 37.621 412 158 15 3 376 206 556 4.35e-45 165
MsG0480023863.01.T01 AT4G13350 37.621 412 158 15 3 376 206 556 4.35e-45 165
MsG0480023863.01.T02 AT4G13350 49.242 132 62 1 1 127 1 132 4.90e-36 130
MsG0480023863.01.T02 AT4G13350 49.242 132 62 1 1 127 1 132 4.90e-36 130
MsG0480023863.01.T02 AT4G32630 47.059 119 58 1 5 118 1 119 2.01e-30 115
MsG0480023863.01.T02 AT4G32630 47.059 119 58 1 5 118 1 119 2.06e-30 115
MsG0480023863.01.T02 AT4G32630 47.059 119 58 1 5 118 1 119 2.06e-30 115
MsG0480023863.01.T02 AT4G32630 47.059 119 58 1 5 118 1 119 2.06e-30 115
MsG0480023863.01.T02 AT4G32630 47.059 119 58 1 5 118 1 119 2.06e-30 115
MsG0480023863.01.T02 AT4G32630 47.059 119 58 1 5 118 1 119 2.06e-30 115
MsG0480023863.01.T02 AT1G08680 41.221 131 72 1 1 126 1 131 7.72e-30 113
MsG0480023863.01.T02 AT1G08680 41.221 131 72 1 1 126 1 131 7.82e-30 113
MsG0480023863.01.T02 AT1G08680 41.221 131 72 1 1 126 1 131 9.34e-30 113
MsG0480023863.01.T02 AT1G08680 41.221 131 72 1 1 126 1 131 9.98e-30 113
MsG0480023863.01.T02 AT1G08680 41.221 131 72 1 1 126 1 131 1.02e-29 113

Find 296 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGCCTGTTAGAGAAATTT+TGG 0.130425 4:-90625244 MsG0480023863.01.T01:CDS
TGACTAATGAACAACATATT+TGG 0.137870 4:+90625701 None:intergenic
TTCCTGTAATCTTATTATTT+TGG 0.158193 4:-90621836 MsG0480023863.01.T01:three_prime_UTR
TACTAGTTCAAGGGTGTATT+TGG 0.183772 4:+90625676 None:intergenic
CCAATACAATATTTCTATAT+TGG 0.208713 4:-90625997 MsG0480023863.01.T01:five_prime_UTR
GCCTGTCCACTGTTTGCTTT+GGG 0.218101 4:+90625186 None:intergenic
TGTAAATTATTTGTTGTTAT+AGG 0.219132 4:-90622082 MsG0480023863.01.T01:three_prime_UTR
GTTGCTTCATTAGCATCTTC+TGG 0.220268 4:-90624384 MsG0480023863.01.T01:CDS
TATTCTTTGATTTGCTATTC+TGG 0.222779 4:-90621861 MsG0480023863.01.T01:three_prime_UTR
TTCTGATGAGGTTCCATTAC+TGG 0.230296 4:+90624835 None:intergenic
TATATAGAATATGCTTAAAA+TGG 0.261268 4:+90626551 None:intergenic
GCTTAATTAGGTCATCTATC+AGG 0.263206 4:+90625934 None:intergenic
GGTAATGAGGGAGCTGCTTT+TGG 0.276609 4:-90622352 MsG0480023863.01.T01:CDS
CGGCGCCAGTCATTGATTAT+TGG 0.285411 4:+90625393 None:intergenic
CATCAAGGAATTGGGACTTT+TGG 0.288342 4:-90622373 MsG0480023863.01.T01:CDS
CAGGAAGACGGAGTCGTATC+AGG 0.291055 4:-90625550 MsG0480023863.01.T01:five_prime_UTR
TACCAAAATAATAAGATTAC+AGG 0.295172 4:+90621834 None:intergenic
TGCAGGTGAAACAGATAAAA+AGG 0.295174 4:+90624485 None:intergenic
TCTCCCAAAATTTCTCTAAC+AGG 0.296870 4:+90625240 None:intergenic
AGCCTGTCCACTGTTTGCTT+TGG 0.303716 4:+90625185 None:intergenic
CTGATACGACTCCGTCTTCC+TGG 0.305228 4:+90625551 None:intergenic
ATTGTGAACCCAACAAATTC+TGG 0.312108 4:-90624710 MsG0480023863.01.T01:CDS
GAGTGAAGAAAAGGGAATAA+AGG 0.313453 4:+90629923 None:intergenic
GACTAATGAACAACATATTT+GGG 0.314074 4:+90625702 None:intergenic
TGGTTTACATGAAATCATTA+TGG 0.316838 4:-90625003 MsG0480023863.01.T01:CDS
TGCTGCTGATACTGCAAATT+AGG 0.317561 4:+90624318 None:intergenic
CCCATTTGCCAGCCTGGGAC+TGG 0.318787 4:+90623842 None:intergenic
AATAAATCTATCATAAGTTT+TGG 0.321720 4:+90626905 None:intergenic
CCAGTAATGTTGACAGGCTT+CGG 0.323021 4:-90626688 MsG0480023863.01.T01:five_prime_UTR
TCCAGTCCCAGGCTGGCAAA+TGG 0.328210 4:-90623843 MsG0480023863.01.T01:CDS
TTATTGGTTCAATTTGTTTA+CGG 0.328849 4:-90626276 MsG0480023863.01.T01:five_prime_UTR
GTTGCACCCCTGTACAAATA+TGG 0.333664 4:-90622191 MsG0480023863.01.T01:three_prime_UTR
TAGTCACTTGTATGAGTGTT+TGG 0.334877 4:+90625739 None:intergenic
TATTCAATTAGTGCTTAATT+AGG 0.335005 4:+90625922 None:intergenic
TCTTGTGCTGCATCTCATAC+AGG 0.343469 4:-90625598 MsG0480023863.01.T01:five_prime_UTR
CTTTGGCTCGTTCAAGAGAT+TGG 0.346177 4:+90625298 None:intergenic
AAGTTAAGCTTGAGACTATC+AGG 0.347652 4:-90624814 MsG0480023863.01.T01:CDS
CAAATTCTGGTGATAACAAT+TGG 0.350343 4:-90624697 MsG0480023863.01.T01:CDS
TGGGTAATCAATCTCTTTCC+TGG 0.352906 4:-90622953 MsG0480023863.01.T01:CDS
ATTACTCTTATTGTCATGTT+TGG 0.354165 4:-90626713 MsG0480023863.01.T01:five_prime_UTR
TGTGTGGCTTGAGGAATTAC+TGG 0.356143 4:+90624749 None:intergenic
ACATGTCCATGATCTACTTT+TGG 0.356322 4:+90625786 None:intergenic
CCGAAGCCTGTCAACATTAC+TGG 0.360239 4:+90626688 None:intergenic
TCCCATTGACAGGCAGATAT+TGG 0.360293 4:+90622048 None:intergenic
GTTGTGCTGTGCTGTGCTGC+TGG 0.364504 4:-90629816 MsG0480023863.01.T02:five_prime_UTR
GGTGCACCCATTTGCCAGCC+TGG 0.366079 4:+90623836 None:intergenic
TGTTTCACCTGCAGGGCCTT+TGG 0.366625 4:-90624475 MsG0480023863.01.T01:CDS
CCAAAGAAAGAGTGAAGAAA+AGG 0.367376 4:+90629914 None:intergenic
TCTTCTTCTTCTTAGTTCTC+AGG 0.371790 4:-90629601 MsG0480023863.01.T02:intron
ATGTGTAGGCATCAAGGAAT+TGG 0.372319 4:-90622382 MsG0480023863.01.T01:intron
TTTCTGAGTTGGTGAAATTA+CGG 0.374040 4:+90629863 None:intergenic
TGTTGATGCTTTATGTGGAT+TGG 0.374570 4:-90626138 MsG0480023863.01.T01:five_prime_UTR
ACAAATACTTACCCGCTATC+AGG 0.383672 4:+90626771 None:intergenic
GCTCAAAGAACCCAGGTCTT+TGG 0.385160 4:+90625281 None:intergenic
AATGTAAATTGTAGTAATAA+TGG 0.385698 4:+90626306 None:intergenic
CCAGTCCCAGGCTGGCAAAT+GGG 0.389187 4:-90623842 MsG0480023863.01.T01:CDS
TGGCAAATGGGTGCACCGCC+TGG 0.389286 4:-90623830 MsG0480023863.01.T01:CDS
GAACATCATCAAAATCAATA+AGG 0.390657 4:+90624789 None:intergenic
TACCCCTGGGGCACTAGTTA+AGG 0.393011 4:+90625971 None:intergenic
TCCTTCCCTGCTCCAGTCCC+AGG 0.393386 4:-90623854 MsG0480023863.01.T01:CDS
CCAATATAGAAATATTGTAT+TGG 0.395841 4:+90625997 None:intergenic
TGCCAGCCTGGGACTGGAGC+AGG 0.395880 4:+90623848 None:intergenic
CAATATAGAAATATTGTATT+GGG 0.396239 4:+90625998 None:intergenic
TTGATTATTGGAGGGCGGCC+AGG 0.396311 4:+90625405 None:intergenic
TTCACCTGCAGGGCCTTTGG+CGG 0.396650 4:-90624472 MsG0480023863.01.T01:CDS
CTCCGTCTTCCTGGTGTCAT+AGG 0.401441 4:+90625560 None:intergenic
AGTGAAGAAAAGGGAATAAA+GGG 0.403723 4:+90629924 None:intergenic
TAACGAGGAGGGTGGATTCC+AGG 0.405464 4:+90622935 None:intergenic
CAGCACAGCACAACACAACC+AGG 0.406960 4:+90629825 None:intergenic
CTTACGGCTGGGGCTTGAAC+TGG 0.408578 4:+90623598 None:intergenic
TTCAGTGATAGGTCTAGTTC+AGG 0.410605 4:-90625483 MsG0480023863.01.T01:five_prime_UTR
CAGTAATGTTGACAGGCTTC+GGG 0.412464 4:-90626687 MsG0480023863.01.T01:five_prime_UTR
TCACCTGCAGGGCCTTTGGC+GGG 0.416171 4:-90624471 MsG0480023863.01.T01:CDS
TTTACTTGGAGGTTTGTCAT+AGG 0.416484 4:+90626616 None:intergenic
AACTAGTGCCCCAGGGGTAC+TGG 0.417731 4:-90625967 MsG0480023863.01.T01:five_prime_UTR
TTTACTCGATGAGTAAATTC+CGG 0.419261 4:+90627011 None:intergenic
AATGGGTGCACCGCCTGGCA+TGG 0.419401 4:-90623825 MsG0480023863.01.T01:CDS
ACTGGAGCAATAGGTGGTTC+AGG 0.420178 4:+90624767 None:intergenic
CTTAATGAAATGAAAATGTT+GGG 0.422238 4:-90626371 MsG0480023863.01.T01:five_prime_UTR
CAGTTAATGCATCTTCGATT+CGG 0.423935 4:+90628923 None:intergenic
AGTCACTTGTATGAGTGTTT+GGG 0.424813 4:+90625740 None:intergenic
TGGCGCCGTGAAGATAGATT+TGG 0.426435 4:-90625378 MsG0480023863.01.T01:five_prime_UTR
GACACTTTACAACCTTTACT+TGG 0.426504 4:+90626602 None:intergenic
TGAGGAATTACTGGAGCAAT+AGG 0.431257 4:+90624758 None:intergenic
TGTTATCACCAGAATTTGTT+GGG 0.433128 4:+90624702 None:intergenic
CTTTATCAAGCGTGTTTATG+TGG 0.435203 4:-90626663 MsG0480023863.01.T01:five_prime_UTR
TTGTTATCACCAGAATTTGT+TGG 0.440130 4:+90624701 None:intergenic
GGTTCGTTGATCACATCAAA+TGG 0.440527 4:+90623625 None:intergenic
GCCAATATCTGCCTGTCAAT+GGG 0.441655 4:-90622049 MsG0480023863.01.T01:three_prime_UTR
GTTGATGCTTTATGTGGATT+GGG 0.442425 4:-90626137 MsG0480023863.01.T01:five_prime_UTR
TCTCTAACAGGCCGGACAAC+AGG 0.442542 4:+90625252 None:intergenic
GTAATAATGGAAAATAAGTT+AGG 0.444910 4:+90626319 None:intergenic
CCTTGGCATTGGCACATTAG+TGG 0.445671 4:+90622742 None:intergenic
ACGAACACCGTTTCAGTGAT+AGG 0.445737 4:-90625494 MsG0480023863.01.T01:five_prime_UTR
ATGGTATCCCACCCACCTAA+TGG 0.446035 4:-90624984 MsG0480023863.01.T01:CDS
TGATTATTGGAGGGCGGCCA+GGG 0.446287 4:+90625406 None:intergenic
AACTTCAACCATATTTGTAC+AGG 0.446643 4:+90622183 None:intergenic
CAAAATCTCAGGGGCGTACA+TGG 0.446706 4:-90622777 MsG0480023863.01.T01:intron
TCCCTGCTCCAGTCCCAGGC+TGG 0.447450 4:-90623850 MsG0480023863.01.T01:CDS
GTTTCCTTAACTAGTGCCCC+AGG 0.449151 4:-90625975 MsG0480023863.01.T01:five_prime_UTR
AACAGTGGACAGGCTGCTAA+TGG 0.451438 4:-90625177 MsG0480023863.01.T01:CDS
GATTGATTACCCATGTTTGA+AGG 0.460288 4:+90622963 None:intergenic
GCCAAGTGTGTACTAGTTCA+AGG 0.462213 4:+90625666 None:intergenic
GGCCAATATCTGCCTGTCAA+TGG 0.462836 4:-90622050 MsG0480023863.01.T01:three_prime_UTR
TGAGCCCACCACCTGTTGTC+CGG 0.463311 4:-90625263 MsG0480023863.01.T01:CDS
AGAGAGAGATCTTTCTGAGT+TGG 0.466902 4:+90629852 None:intergenic
ACTTTAAACCCCTTCCCTGC+AGG 0.470044 4:-90622281 MsG0480023863.01.T01:exon
CCTTGCAAAGATGACATAGA+AGG 0.470966 4:+90623023 None:intergenic
CTCGATGAGTAAATTCCGGC+TGG 0.472713 4:+90627015 None:intergenic
CAAAGAAAGAGTGAAGAAAA+GGG 0.473003 4:+90629915 None:intergenic
ACAGGCCGGACAACAGGTGG+TGG 0.473980 4:+90625258 None:intergenic
GATGTTCACAGTTGGAGCTC+CGG 0.474090 4:+90624428 None:intergenic
GCTTAATGAAATGAAAATGT+TGG 0.477102 4:-90626372 MsG0480023863.01.T01:five_prime_UTR
AAAATAATATGTAACATCAA+TGG 0.478909 4:+90626877 None:intergenic
CATATTCATGCCTCAGCAAT+GGG 0.480130 4:-90622882 MsG0480023863.01.T01:CDS
CCTTCTATGTCATCTTTGCA+AGG 0.482591 4:-90623023 MsG0480023863.01.T01:CDS
GATCCCGCCAAAGGCCCTGC+AGG 0.482680 4:+90624468 None:intergenic
TGTTCGTATGTATCCTCATA+AGG 0.482791 4:+90625510 None:intergenic
GAAATGCTAACCAGTACCCC+TGG 0.483364 4:+90625957 None:intergenic
TGTGTAGGCATCAAGGAATT+GGG 0.485262 4:-90622381 MsG0480023863.01.T01:intron
GCCTGGGACTGGAGCAGGGA+AGG 0.486363 4:+90623853 None:intergenic
CGCCAGTCATTGATTATTGG+AGG 0.486736 4:+90625396 None:intergenic
AGTTCAGGTGGAAGAAGTCC+TGG 0.490126 4:-90625468 MsG0480023863.01.T01:five_prime_UTR
ACTTCAAGAAGGAGGAAATC+AGG 0.490868 4:-90626946 MsG0480023863.01.T01:five_prime_UTR
CTCATACAAGTGACTATGCT+TGG 0.491067 4:-90625732 MsG0480023863.01.T01:five_prime_UTR
CCCTTGAACTAGTACACACT+TGG 0.493755 4:-90625667 MsG0480023863.01.T01:five_prime_UTR
CTGTGTTGTGGTAGCCATGT+TGG 0.494306 4:-90626231 MsG0480023863.01.T01:five_prime_UTR
CCGAATGGATTACCTCCTGC+AGG 0.494585 4:+90622266 None:intergenic
TGCAGTAAACCCTTCAAACA+TGG 0.495545 4:-90622973 MsG0480023863.01.T01:CDS
CTCATTCTTTACCTGATAGC+GGG 0.496064 4:-90626782 MsG0480023863.01.T01:five_prime_UTR
AAAGATCTCTCTCTCTTCCC+TGG 0.496233 4:-90629843 MsG0480023863.01.T02:five_prime_UTR
AATATGCCAAAAGTAGATCA+TGG 0.498125 4:-90625792 MsG0480023863.01.T01:five_prime_UTR
TGTCTTTCTTGATCATATCC+AGG 0.498660 4:+90625450 None:intergenic
TCAGTTAGAACCCTAAAAGT+TGG 0.501923 4:+90629686 None:intergenic
GTGCACCCATTTGCCAGCCT+GGG 0.503540 4:+90623837 None:intergenic
CTTGGCATTGGCACATTAGT+GGG 0.504879 4:+90622743 None:intergenic
CATTACTCGTCTAGGCGAAA+GGG 0.506515 4:+90621973 None:intergenic
CATCTCCAAATCTATCTTCA+CGG 0.506927 4:+90625373 None:intergenic
AAATTCTGGTGATAACAATT+GGG 0.507260 4:-90624696 MsG0480023863.01.T01:CDS
TGTTGTTATAGGAAAGATGA+AGG 0.509927 4:-90622071 MsG0480023863.01.T01:three_prime_UTR
ACTTTACAACCTTTACTTGG+AGG 0.513755 4:+90626605 None:intergenic
GATGACCGATCTCTCTATGC+TGG 0.514247 4:+90622127 None:intergenic
ATGTAAACCATGTCTAGTAA+TGG 0.515212 4:+90625016 None:intergenic
GCCGATCATAAGAGAAGCCC+TGG 0.515583 4:-90625423 MsG0480023863.01.T01:five_prime_UTR
CTTGTGCTGCATCTCATACA+GGG 0.516201 4:-90625597 MsG0480023863.01.T01:five_prime_UTR
GAAGATAATCGTATAACTGA+TGG 0.516298 4:-90625339 MsG0480023863.01.T01:five_prime_UTR
CACTGCTTAATAGTGTGTTA+TGG 0.516603 4:-90621922 MsG0480023863.01.T01:three_prime_UTR
ATGGGTGCACCGCCTGGCAT+GGG 0.517111 4:-90623824 MsG0480023863.01.T01:CDS
TGTCCACTGTTTGCTTTGGG+AGG 0.517269 4:+90625189 None:intergenic
AATATAGATCAGCAACTGAA+TGG 0.517650 4:-90622322 MsG0480023863.01.T01:CDS
GAACGGCATCTTCAGTAGCT+TGG 0.518079 4:-90624861 MsG0480023863.01.T01:CDS
GCTGGGGCTTGAACTGGTGT+TGG 0.519812 4:+90623604 None:intergenic
AAATATTGTATTGGGAAGTG+TGG 0.520357 4:+90626006 None:intergenic
GCTAATGAAGCAACACTGGA+TGG 0.520961 4:+90624393 None:intergenic
CTTAATTAGGTCATCTATCA+GGG 0.523202 4:+90625935 None:intergenic
AACTAGACCTATCACTGAAA+CGG 0.523791 4:+90625487 None:intergenic
AACTGATGGAGGTATTAAGA+TGG 0.524130 4:-90625325 MsG0480023863.01.T01:exon
ATATGTGTTGATGCTTTATG+TGG 0.526582 4:-90626143 MsG0480023863.01.T01:five_prime_UTR
TATGTGGATAGGAGATTCAC+TGG 0.527674 4:-90626647 MsG0480023863.01.T01:five_prime_UTR
TGGATTACCTCCTGCAGGGA+AGG 0.529326 4:+90622271 None:intergenic
CCTGCAGGAGGTAATCCATT+CGG 0.529389 4:-90622266 MsG0480023863.01.T01:three_prime_UTR
TTCCTTTCCATTACTAGACA+TGG 0.530813 4:-90625023 MsG0480023863.01.T01:CDS
TATGACAAACCTCCAAGTAA+AGG 0.532177 4:-90626614 MsG0480023863.01.T01:five_prime_UTR
GATTACCTCCTGCAGGGAAG+GGG 0.535685 4:+90622273 None:intergenic
GTTTAAGCTGCTGACGGTGA+TGG 0.537416 4:+90629779 None:intergenic
TGATACTGCAAATTAGGCCA+TGG 0.537541 4:+90624324 None:intergenic
GGAGATGACAAGTCGACTAA+AGG 0.537579 4:-90628992 MsG0480023863.01.T02:exon
GTGTGTATGTCGTGAGTGTA+AGG 0.537722 4:-90626456 MsG0480023863.01.T01:five_prime_UTR
ACATATTCATGCCTCAGCAA+TGG 0.538067 4:-90622883 MsG0480023863.01.T01:CDS
ATAGTGTGTTATGGTGATCA+TGG 0.538561 4:-90621913 MsG0480023863.01.T01:three_prime_UTR
GTCATGCTAACTAGTGCCTG+TGG 0.540023 4:-90626115 MsG0480023863.01.T01:five_prime_UTR
GAGTACATTATATCTGATAG+AGG 0.540574 4:+90626573 None:intergenic
TGAAATAGTTACCTTGGCAT+TGG 0.541368 4:+90622731 None:intergenic
GCCCTCCAATAATCAATGAC+TGG 0.541872 4:-90625398 MsG0480023863.01.T01:five_prime_UTR
ACATTACTCGTCTAGGCGAA+AGG 0.542873 4:+90621972 None:intergenic
AACTGAATGTGTAGGCATCA+AGG 0.543374 4:-90622388 MsG0480023863.01.T01:intron
TTTCTTAACTATTTCCCCAC+AGG 0.547134 4:+90626099 None:intergenic
GTGAAGAAAAGGGAATAAAG+GGG 0.548713 4:+90629925 None:intergenic
ACTGTACGACTCCCATTGAC+AGG 0.549231 4:+90622038 None:intergenic
GGAAGTTCATATCTTCCACT+TGG 0.549306 4:+90624005 None:intergenic
TTTGTAGATTGTGATGGTTG+TGG 0.549399 4:+90623649 None:intergenic
TTGGTGCCAGTAATGTTGAC+AGG 0.551074 4:-90626694 MsG0480023863.01.T01:five_prime_UTR
GGATTACCTCCTGCAGGGAA+GGG 0.552909 4:+90622272 None:intergenic
GAAGGGTTTACTGCAGCTGA+AGG 0.554095 4:+90622981 None:intergenic
TTGTGCAGTAAATTTAGCCA+TGG 0.554246 4:+90626980 None:intergenic
GTTTCCTCTCGACTAAAGAA+TGG 0.554597 4:+90622153 None:intergenic
ATTGATTACCCATGTTTGAA+GGG 0.554638 4:+90622964 None:intergenic
CCAAAATTTCTCTAACAGGC+CGG 0.556026 4:+90625244 None:intergenic
CATGGGAGTGCATTATTGAA+AGG 0.556859 4:+90624342 None:intergenic
AGTAGCTTGGCATCCAGTAA+TGG 0.560037 4:-90624848 MsG0480023863.01.T01:CDS
TCTTGAACGAGCCAAAGACC+TGG 0.560518 4:-90625292 MsG0480023863.01.T01:CDS
GCCAGGGCTTCTCTTATGAT+CGG 0.560564 4:+90625422 None:intergenic
AGATGCTAATGAAGCAACAC+TGG 0.561491 4:+90624389 None:intergenic
TCCCAAAGCAAACAGTGGAC+AGG 0.562444 4:-90625187 MsG0480023863.01.T01:CDS
GGGTGCAACAAATTGATGCT+TGG 0.562779 4:+90622205 None:intergenic
ATAGGAGATTCACTGGCGAC+AGG 0.563351 4:-90626640 MsG0480023863.01.T01:five_prime_UTR
TTTCCTTAACTAGTGCCCCA+GGG 0.563638 4:-90625974 MsG0480023863.01.T01:five_prime_UTR
TTACCTCAGTGCAACATCAA+AGG 0.564489 4:+90624670 None:intergenic
GTTGCGAAGATGTTCACAGT+TGG 0.565416 4:+90624420 None:intergenic
CATGGCTACCACAACACAGT+AGG 0.565503 4:+90626235 None:intergenic
AACCATGTCTAGTAATGGAA+AGG 0.566532 4:+90625021 None:intergenic
ATTGAAATTACTTACGGCTG+GGG 0.566803 4:+90623588 None:intergenic
CTCAAGCTTAACTTCTGATG+AGG 0.569730 4:+90624823 None:intergenic
TTGAGCCACGGTAGTTTGTG+TGG 0.569914 4:+90624733 None:intergenic
TGTACCATTCTTTAGTCGAG+AGG 0.571743 4:-90622157 MsG0480023863.01.T01:three_prime_UTR
TAGATCAGCAACTGAATGGT+AGG 0.571969 4:-90622318 MsG0480023863.01.T01:CDS
TCAAGCGTGTTTATGTGGAT+AGG 0.573093 4:-90626658 MsG0480023863.01.T01:five_prime_UTR
ACCTAAAACATTACTCGTCT+AGG 0.574658 4:+90621965 None:intergenic
GCTTTGTACAGCTCAGAATG+AGG 0.575343 4:+90629885 None:intergenic
AGCACAGCACAACACAACCA+GGG 0.576147 4:+90629826 None:intergenic
AATGGATTTGTAGATTGTGA+TGG 0.576263 4:+90623643 None:intergenic
GAAGTTAGTGCACTTCAAGA+AGG 0.576846 4:-90626957 MsG0480023863.01.T01:five_prime_UTR
GCCAGTCATTGATTATTGGA+GGG 0.578746 4:+90625397 None:intergenic
TGAACTGAGACACCCATGCC+AGG 0.578979 4:+90623812 None:intergenic
GCAGCTGAAGGCGCTACACT+AGG 0.581634 4:+90622993 None:intergenic
ACACTCCAGCATAGAGAGAT+CGG 0.582746 4:-90622132 MsG0480023863.01.T01:three_prime_UTR
AGCATCTTCTGGATTGACAA+TGG 0.582951 4:-90624373 MsG0480023863.01.T01:CDS
CTAATGAAGCAACACTGGAT+GGG 0.584550 4:+90624394 None:intergenic
AGTGATAGGTCTAGTTCAGG+TGG 0.585327 4:-90625480 MsG0480023863.01.T01:five_prime_UTR
TCATGCTAACTAGTGCCTGT+GGG 0.586367 4:-90626114 MsG0480023863.01.T01:five_prime_UTR
CGTATGTATCCTCATAAGGA+AGG 0.587063 4:+90625514 None:intergenic
TCAGCTCTTACTGCTACTGC+CGG 0.589167 4:-90624447 MsG0480023863.01.T01:CDS
GCCAGCCTGGGACTGGAGCA+GGG 0.589815 4:+90623849 None:intergenic
AACACATATGCACAACACAT+TGG 0.590848 4:+90626157 None:intergenic
AAATGCTAACCAGTACCCCT+GGG 0.591903 4:+90625958 None:intergenic
GATACTGCAAATTAGGCCAT+GGG 0.593319 4:+90624325 None:intergenic
AGCAGTGACGCTACAACACA+AGG 0.594134 4:+90621938 None:intergenic
ATGGCTACCACAACACAGTA+GGG 0.597145 4:+90626236 None:intergenic
GTTAGTGCACTTCAAGAAGG+AGG 0.597643 4:-90626954 MsG0480023863.01.T01:five_prime_UTR
AGGAAGACGGAGTCGTATCA+GGG 0.597957 4:-90625549 MsG0480023863.01.T01:five_prime_UTR
AAATCTTAAGATCATCCGAA+TGG 0.599296 4:+90622251 None:intergenic
AAGATAGATTTGGAGATGGA+CGG 0.599785 4:-90625368 MsG0480023863.01.T01:five_prime_UTR
ACTTCAACCATATTTGTACA+GGG 0.600179 4:+90622184 None:intergenic
CAACAAATAATTTACAAGCA+AGG 0.601128 4:+90622089 None:intergenic
TGAAGAAAAGGGAATAAAGG+GGG 0.601181 4:+90629926 None:intergenic
CCACTAATGTGCCAATGCCA+AGG 0.601289 4:-90622742 MsG0480023863.01.T01:intron
TCGAGTAAAATCAATCTCCA+TGG 0.602286 4:-90626997 MsG0480023863.01.T01:five_prime_UTR
CCAAGTGTGTACTAGTTCAA+GGG 0.604502 4:+90625667 None:intergenic
TTCCTTAACTAGTGCCCCAG+GGG 0.605617 4:-90625973 MsG0480023863.01.T01:five_prime_UTR
CTTGAACGAGCCAAAGACCT+GGG 0.608680 4:-90625291 MsG0480023863.01.T01:CDS
CCGTTGTTCACATCTGCTGT+TGG 0.610741 4:-90624291 MsG0480023863.01.T01:intron
TGTGCTTGTGGAGGGAGCGT+TGG 0.610899 4:+90622903 None:intergenic
TTAAACCCCTTCCCTGCAGG+AGG 0.611118 4:-90622278 MsG0480023863.01.T01:exon
ACTCATTCTTTACCTGATAG+CGG 0.615061 4:-90626783 MsG0480023863.01.T01:five_prime_UTR
GATAATCGTATAACTGATGG+AGG 0.619976 4:-90625336 MsG0480023863.01.T01:five_prime_UTR
GGAATTACTGGAGCAATAGG+TGG 0.620928 4:+90624761 None:intergenic
GCAACTGAATGGTAGGTCGT+CGG 0.621666 4:-90622311 MsG0480023863.01.T01:CDS
ACGGTAGTTTGTGTGGCTTG+AGG 0.623732 4:+90624740 None:intergenic
GCATCTCATACAGGGCGACA+AGG 0.624797 4:-90625589 MsG0480023863.01.T01:five_prime_UTR
AGTTCAATATAATAATGTGA+TGG 0.625728 4:-90623795 MsG0480023863.01.T01:intron
GAGGCATGAATATGTGCTTG+TGG 0.625753 4:+90622891 None:intergenic
CGTGAAGATAGATTTGGAGA+TGG 0.626673 4:-90625372 MsG0480023863.01.T01:five_prime_UTR
TTCCTATGACACCAGGAAGA+CGG 0.630287 4:-90625562 MsG0480023863.01.T01:five_prime_UTR
GCAGTAAACCCTTCAAACAT+GGG 0.631363 4:-90622972 MsG0480023863.01.T01:CDS
AATAAAATCTTACTCCAACA+TGG 0.634014 4:+90626217 None:intergenic
TTAATGAAATGAAAATGTTG+GGG 0.634609 4:-90626370 MsG0480023863.01.T01:five_prime_UTR
ATGAGCTGATGAATTCGAGA+AGG 0.636347 4:-90622006 MsG0480023863.01.T01:three_prime_UTR
CAGGCCGGACAACAGGTGGT+GGG 0.637390 4:+90625259 None:intergenic
CTTTCAATAATGCACTCCCA+TGG 0.639064 4:-90624341 MsG0480023863.01.T01:CDS
ACTGTAGACATAAAACCAAG+TGG 0.639870 4:-90624020 MsG0480023863.01.T01:intron
TGTGATGGTTGTGGAAAACT+CGG 0.641253 4:+90623658 None:intergenic
GCATATGATAACGAGGAGGG+TGG 0.642199 4:+90622927 None:intergenic
CAAAGAATAATAATACAACC+AGG 0.642380 4:+90621875 None:intergenic
CATGAATATGTGCTTGTGGA+GGG 0.642440 4:+90622895 None:intergenic
CGAATGGATTACCTCCTGCA+GGG 0.644063 4:+90622267 None:intergenic
ATGCATTAACTGCAACAGCA+TGG 0.645179 4:-90628912 MsG0480023863.01.T02:intron
AATATGTAACATCAATGGAG+CGG 0.645237 4:+90626882 None:intergenic
CTAACAGGCCGGACAACAGG+TGG 0.645439 4:+90625255 None:intergenic
AGTCATTGATTATTGGAGGG+CGG 0.647052 4:+90625400 None:intergenic
CATGCTAACTAGTGCCTGTG+GGG 0.649399 4:-90626113 MsG0480023863.01.T01:five_prime_UTR
TAATGGCTCAACACTCACAC+AGG 0.649534 4:-90625160 MsG0480023863.01.T01:intron
CGTTGGTGCATATGATAACG+AGG 0.649957 4:+90622920 None:intergenic
TGGTTGTGGAAAACTCGGCA+TGG 0.650360 4:+90623663 None:intergenic
TGGGTTCACAATTTGAGCCA+CGG 0.651378 4:+90624721 None:intergenic
AGGATGATTCCTATGACACC+AGG 0.654640 4:-90625569 MsG0480023863.01.T01:five_prime_UTR
GTAAGAGCTGATCCCGCCAA+AGG 0.656856 4:+90624459 None:intergenic
GGTGCATATGATAACGAGGA+GGG 0.662239 4:+90622924 None:intergenic
GAAGAAAAGGGAATAAAGGG+GGG 0.662483 4:+90629927 None:intergenic
GCATGAATATGTGCTTGTGG+AGG 0.669871 4:+90622894 None:intergenic
CCTCAGTGCAACATCAAAGG+AGG 0.671212 4:+90624673 None:intergenic
GGAGGTTCACTAATTCGCAG+AGG 0.674693 4:+90625207 None:intergenic
TATACTTGGTCCCATTGCTG+AGG 0.675665 4:+90622872 None:intergenic
GTGGTGGGCTCAAAGAACCC+AGG 0.678153 4:+90625274 None:intergenic
TGGAAGATATGAACTTCCTG+AGG 0.678204 4:-90624000 MsG0480023863.01.T01:intron
CTTCAACCATATTTGTACAG+GGG 0.679886 4:+90622185 None:intergenic
GAACCTCCCAAAGCAAACAG+TGG 0.681218 4:-90625192 MsG0480023863.01.T01:CDS
CCTCCTTTGATGTTGCACTG+AGG 0.695913 4:-90624673 MsG0480023863.01.T01:intron
GCAGTCACCCTACTGTGTTG+TGG 0.706821 4:-90626243 MsG0480023863.01.T01:five_prime_UTR
TCAAGCCACACAAACTACCG+TGG 0.714114 4:-90624738 MsG0480023863.01.T01:CDS
TAATGAAATGAAAATGTTGG+GGG 0.718148 4:-90626369 MsG0480023863.01.T01:five_prime_UTR
TGGTGCATATGATAACGAGG+AGG 0.724647 4:+90622923 None:intergenic
ACTGAGACACCCATGCCAGG+CGG 0.743510 4:+90623815 None:intergenic
AAGTTGGTATAAAAGAGACG+TGG 0.743868 4:+90629702 None:intergenic
CCAACAGCAGATGTGAACAA+CGG 0.748816 4:+90624291 None:intergenic
AATGCTAACCAGTACCCCTG+GGG 0.749907 4:+90625959 None:intergenic
AAGACGGAGTCGTATCAGGG+AGG 0.754193 4:-90625546 MsG0480023863.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAATTTAAAAAGGT+TGG + Chr4:90623079-90623098 None:intergenic 10.0%
!! CTTGAATAATTAATTTAAAA+AGG + Chr4:90623083-90623102 None:intergenic 10.0%
!! AAAATAATATGTAACATCAA+TGG + Chr4:90624872-90624891 None:intergenic 15.0%
!! AAAATTAATCTAACTTAAAC+AGG + Chr4:90629068-90629087 None:intergenic 15.0%
!! AAATTAATTATTCAAGATGA+AGG - Chr4:90623087-90623106 MsG0480023863.01.T01:intron 15.0%
!! AATGTAAATTGTAGTAATAA+TGG + Chr4:90625443-90625462 None:intergenic 15.0%
!! AATTAATTATTCAAGATGAA+GGG - Chr4:90623088-90623107 MsG0480023863.01.T01:intron 15.0%
!! ACATAAATTGAAATTACTTA+CGG + Chr4:90628167-90628186 None:intergenic 15.0%
!! AGAAAATACAATTAATATAC+AGG + Chr4:90624563-90624582 None:intergenic 15.0%
!! ATAAAAAATCAGTTTAGAAA+TGG + Chr4:90624703-90624722 None:intergenic 15.0%
!! CAATATAGAAATATTGTATT+GGG + Chr4:90625751-90625770 None:intergenic 15.0%
!! GAATCATTATTAATTACTAT+CGG - Chr4:90628260-90628279 MsG0480023863.01.T02:intron 15.0%
!! GTAAATTTATTATGATTGTA+TGG - Chr4:90629285-90629304 MsG0480023863.01.T02:intron 15.0%
!! GTATTAATAATAAGAATGAT+GGG - Chr4:90628452-90628471 MsG0480023863.01.T02:intron 15.0%
!! TAAAAAATCAGTTTAGAAAT+GGG + Chr4:90624702-90624721 None:intergenic 15.0%
!! TATATAGAATATGCTTAAAA+TGG + Chr4:90625198-90625217 None:intergenic 15.0%
!! TTCTTATTATTAATACGATA+AGG + Chr4:90628448-90628467 None:intergenic 15.0%
!!! AAGAAATATTTTTCAAAGAA+TGG - Chr4:90624931-90624950 MsG0480023863.01.T01:intron 15.0%
!!! AATAAATCTATCATAAGTTT+TGG + Chr4:90624844-90624863 None:intergenic 15.0%
!!! AGAAATATTTTTCAAAGAAT+GGG - Chr4:90624932-90624951 MsG0480023863.01.T01:intron 15.0%
!!! ATTTTTTTACTTTCAAAAAG+TGG - Chr4:90625703-90625722 MsG0480023863.01.T01:five_prime_UTR 15.0%
!!! TAATCTTATTATTTTGGTAA+AGG - Chr4:90629916-90629935 MsG0480023863.01.T02:five_prime_UTR 15.0%
!!! TCAAATAGAAAATCAATTTT+CGG + Chr4:90626829-90626848 None:intergenic 15.0%
!!! TCTTTTTCTTTTTAATTCTA+GGG - Chr4:90625007-90625026 MsG0480023863.01.T01:CDS 15.0%
!!! TGTAAATTATTTGTTGTTAT+AGG - Chr4:90629664-90629683 MsG0480023863.01.T02:five_prime_UTR 15.0%
!!! TTACTAAGAAATTTTTTCAA+GGG - Chr4:90626693-90626712 MsG0480023863.01.T01:five_prime_UTR 15.0%
!!! TTCTTTTTCTTTTTAATTCT+AGG - Chr4:90625006-90625025 MsG0480023863.01.T01:CDS 15.0%
!!! TTTACTAAGAAATTTTTTCA+AGG - Chr4:90626692-90626711 MsG0480023863.01.T01:five_prime_UTR 15.0%
!! AAATAAAGTTCAAATAGCAT+AGG + Chr4:90628934-90628953 None:intergenic 20.0%
!! AGGCAAAAAAATAATTGATT+GGG + Chr4:90628914-90628933 None:intergenic 20.0%
!! AGTTCAATATAATAATGTGA+TGG - Chr4:90627951-90627970 MsG0480023863.01.T02:intron 20.0%
!! ATTAATTATTCAAGATGAAG+GGG - Chr4:90623089-90623108 MsG0480023863.01.T01:intron 20.0%
!! CCAATATAGAAATATTGTAT+TGG + Chr4:90625752-90625771 None:intergenic 20.0%
!! CGTATTAATAATAAGAATGA+TGG - Chr4:90628451-90628470 MsG0480023863.01.T02:intron 20.0%
!! CTTAATGAAATGAAAATGTT+GGG - Chr4:90625375-90625394 MsG0480023863.01.T01:five_prime_UTR 20.0%
!! CTTAGTAAAGAAAGTAAATA+CGG + Chr4:90626681-90626700 None:intergenic 20.0%
!! TACCAAAATAATAAGATTAC+AGG + Chr4:90629915-90629934 None:intergenic 20.0%
!! TAGGCAAAAAAATAATTGAT+TGG + Chr4:90628915-90628934 None:intergenic 20.0%
!! TATTCAATTAGTGCTTAATT+AGG + Chr4:90625827-90625846 None:intergenic 20.0%
!! TGTTGAATAGATATTTCTTA+AGG - Chr4:90624438-90624457 MsG0480023863.01.T01:CDS 20.0%
!! TTAATGAAATGAAAATGTTG+GGG - Chr4:90625376-90625395 MsG0480023863.01.T01:five_prime_UTR 20.0%
!! TTGTCCTATAGTATATTAAA+TGG + Chr4:90622915-90622934 None:intergenic 20.0%
!! TTGTTAATAAAATGTGTAGT+AGG + Chr4:90623352-90623371 None:intergenic 20.0%
!! TTTAATAAAAGATTCAGTGT+TGG + Chr4:90623808-90623827 None:intergenic 20.0%
!! TTTCGAAAGAAGTAAATAAA+TGG - Chr4:90623297-90623316 MsG0480023863.01.T01:intron 20.0%
!!! CCAATACAATATTTCTATAT+TGG - Chr4:90625749-90625768 MsG0480023863.01.T01:five_prime_UTR 20.0%
!!! GATACACTAAATTTTATTGT+AGG - Chr4:90625258-90625277 MsG0480023863.01.T01:CDS 20.0%
!!! GTAATAATGGAAAATAAGTT+AGG + Chr4:90625430-90625449 None:intergenic 20.0%
!!! TATGCCATTTAATATACTAT+AGG - Chr4:90622908-90622927 MsG0480023863.01.T01:CDS 20.0%
!!! TGATTCAAAATCAATTTTCA+CGG + Chr4:90622353-90622372 None:intergenic 20.0%
!!! TTAGATTAATTTTTTGCTCT+TGG - Chr4:90629075-90629094 MsG0480023863.01.T02:intron 20.0%
!!! TTATTGGTTCAATTTGTTTA+CGG - Chr4:90625470-90625489 MsG0480023863.01.T01:five_prime_UTR 20.0%
!!! TTCCTGTAATCTTATTATTT+TGG - Chr4:90629910-90629929 MsG0480023863.01.T02:five_prime_UTR 20.0%
!!! TTGTTGTGTTTTATGAATAA+CGG + Chr4:90629168-90629187 None:intergenic 20.0%
! AAAACTCAATAACTTAACAG+AGG + Chr4:90628364-90628383 None:intergenic 25.0%
! AAAATGTAAATTATGACCGA+TGG - Chr4:90623494-90623513 MsG0480023863.01.T01:intron 25.0%
! AAAGTCAATAAAATAGTGAG+AGG - Chr4:90623423-90623442 MsG0480023863.01.T01:intron 25.0%
! AAATGTAAATTATGACCGAT+GGG - Chr4:90623495-90623514 MsG0480023863.01.T01:intron 25.0%
! AAATTCTGGTGATAACAATT+GGG - Chr4:90627050-90627069 MsG0480023863.01.T02:CDS 25.0%
! AAATTTGTGCATACATATTG+TGG + Chr4:90624320-90624339 None:intergenic 25.0%
! AAGATTGCTTTCTTTAATAG+AGG - Chr4:90628420-90628439 MsG0480023863.01.T02:intron 25.0%
! AATAAAATCTTACTCCAACA+TGG + Chr4:90625532-90625551 None:intergenic 25.0%
! AATATATACAGCAGCAAAAA+TGG - Chr4:90623138-90623157 MsG0480023863.01.T01:intron 25.0%
! AATATGTATGCACAAATTTC+TGG - Chr4:90624321-90624340 MsG0480023863.01.T01:CDS 25.0%
! ATATATTTATCTTCCACCAA+TGG + Chr4:90628328-90628347 None:intergenic 25.0%
! ATGCAAACAGTAAATAGATA+TGG + Chr4:90629043-90629062 None:intergenic 25.0%
! ATTACTCTTATTGTCATGTT+TGG - Chr4:90625033-90625052 MsG0480023863.01.T01:CDS 25.0%
! CAAAAATAAAACACTATCCA+TGG + Chr4:90623893-90623912 None:intergenic 25.0%
! CAAAGAATAATAATACAACC+AGG + Chr4:90629874-90629893 None:intergenic 25.0%
! CAAATTTATCTCTTCATTCA+AGG + Chr4:90624061-90624080 None:intergenic 25.0%
! CAACAAATAATTTACAAGCA+AGG + Chr4:90629660-90629679 None:intergenic 25.0%
! CAATGATGTTCTTAATAATG+TGG - Chr4:90626620-90626639 MsG0480023863.01.T01:five_prime_UTR 25.0%
! CATTATTAATTACTATCGGT+TGG - Chr4:90628264-90628283 MsG0480023863.01.T02:intron 25.0%
! CTATTAAAGAAAGCAATCTT+CGG + Chr4:90628420-90628439 None:intergenic 25.0%
! GAACATCATCAAAATCAATA+AGG + Chr4:90626960-90626979 None:intergenic 25.0%
! GACTAATGAACAACATATTT+GGG + Chr4:90626047-90626066 None:intergenic 25.0%
! GCTTAATGAAATGAAAATGT+TGG - Chr4:90625374-90625393 MsG0480023863.01.T01:five_prime_UTR 25.0%
! GGCAAAAAAATAATTGATTG+GGG + Chr4:90628913-90628932 None:intergenic 25.0%
! TAATGAAATGAAAATGTTGG+GGG - Chr4:90625377-90625396 MsG0480023863.01.T01:five_prime_UTR 25.0%
! TACTTTGTAGCAACTTTAAA+TGG - Chr4:90623708-90623727 MsG0480023863.01.T01:intron 25.0%
! TAGAGGAGACTAATTAATTA+GGG + Chr4:90624017-90624036 None:intergenic 25.0%
! TAGTATACAATTATGAACTC+CGG + Chr4:90624624-90624643 None:intergenic 25.0%
! TATGTTAGGAAAACAGATAA+TGG - Chr4:90628621-90628640 MsG0480023863.01.T02:intron 25.0%
! TGACTAATGAACAACATATT+TGG + Chr4:90626048-90626067 None:intergenic 25.0%
! TGCATTAACTGAAAGAATTA+TGG + Chr4:90628658-90628677 None:intergenic 25.0%
! TGGTTTACATGAAATCATTA+TGG - Chr4:90626743-90626762 MsG0480023863.01.T01:five_prime_UTR 25.0%
! TTATTTGTGAATTGCTTGAT+TGG - Chr4:90622681-90622700 MsG0480023863.01.T01:intron 25.0%
! TTTATCATCTGACATTGAAA+AGG - Chr4:90628510-90628529 MsG0480023863.01.T02:intron 25.0%
! TTTGATTATGCTATAGTGTA+TGG - Chr4:90623742-90623761 MsG0480023863.01.T01:intron 25.0%
!! ATGGATGATGATCATATTTT+CGG - Chr4:90622287-90622306 MsG0480023863.01.T01:exon 25.0%
!! CTATGTTTGAATTCAGTTTT+TGG + Chr4:90622616-90622635 None:intergenic 25.0%
!! CTCTTTTATACCAACTTTTA+GGG - Chr4:90622050-90622069 MsG0480023863.01.T01:three_prime_UTR 25.0%
!! GAAATGATAAAAGGTATACT+TGG + Chr4:90628891-90628910 None:intergenic 25.0%
!! TCTCTTTGGTTTAACTTTAA+TGG + Chr4:90623978-90623997 None:intergenic 25.0%
!! TCTCTTTTATACCAACTTTT+AGG - Chr4:90622049-90622068 MsG0480023863.01.T01:three_prime_UTR 25.0%
!! TGTTGTGTTTTATGAATAAC+GGG + Chr4:90629167-90629186 None:intergenic 25.0%
!! TTGGTAACATCAAGTAATAT+TGG - Chr4:90623527-90623546 MsG0480023863.01.T01:intron 25.0%
!! TTTGTGATGTAATCTGTTTT+AGG - Chr4:90629263-90629282 MsG0480023863.01.T02:intron 25.0%
!! TTTTCCTAACATAAATTGAC+AGG + Chr4:90628614-90628633 None:intergenic 25.0%
!! TTTTTATGTTAATTTCCAGC+CGG - Chr4:90624716-90624735 MsG0480023863.01.T01:CDS 25.0%
!!! CATATTTTAATAAGCTCTTC+AGG + Chr4:90625940-90625959 None:intergenic 25.0%
!!! GATAAGTTTTAGTTAGTGTT+TGG - Chr4:90622320-90622339 MsG0480023863.01.T01:CDS 25.0%
!!! TAAAAGAGAGCTTTAAGTAA+AGG - Chr4:90622406-90622425 MsG0480023863.01.T01:intron 25.0%
!!! TAGTTATTTCTTGTAGTTCT+TGG - Chr4:90622633-90622652 MsG0480023863.01.T01:intron 25.0%
!!! TATTCTTTGATTTGCTATTC+TGG - Chr4:90629885-90629904 MsG0480023863.01.T02:five_prime_UTR 25.0%
!!! TCAGAATTTTGTTTATGTCA+TGG - Chr4:90623945-90623964 MsG0480023863.01.T01:intron 25.0%
!!! TCTTTTGTTACTTGATGATA+TGG - Chr4:90623222-90623241 MsG0480023863.01.T01:intron 25.0%
!!! TGGATAGAGTTGATAATTAT+TGG - Chr4:90629305-90629324 MsG0480023863.01.T02:intron 25.0%
!!! TGGTTGTATTTTTTTTTTCC+TGG - Chr4:90629853-90629872 MsG0480023863.01.T02:five_prime_UTR 25.0%
!!! TTTTTGGAATTCAACATGTA+GGG - Chr4:90625559-90625578 MsG0480023863.01.T01:five_prime_UTR 25.0%
!!! TTTTTTGGAATTCAACATGT+AGG - Chr4:90625558-90625577 MsG0480023863.01.T01:five_prime_UTR 25.0%
AAAAATGAACGAACTATTCG+AGG - Chr4:90622785-90622804 MsG0480023863.01.T01:intron 30.0%
AAATATTGTATTGGGAAGTG+TGG + Chr4:90625743-90625762 None:intergenic 30.0%
AAATCTTAAGATCATCCGAA+TGG + Chr4:90629498-90629517 None:intergenic 30.0%
AAATTGAAATTACTTACGGC+TGG + Chr4:90628163-90628182 None:intergenic 30.0%
AACAAGAGAGTAAGAAACAA+GGG + Chr4:90624292-90624311 None:intergenic 30.0%
AACTTCAACCATATTTGTAC+AGG + Chr4:90629566-90629585 None:intergenic 30.0%
AATATAGATCAGCAACTGAA+TGG - Chr4:90629424-90629443 MsG0480023863.01.T02:intron 30.0%
AATATGCCAAAAGTAGATCA+TGG - Chr4:90625954-90625973 MsG0480023863.01.T01:five_prime_UTR 30.0%
AATATGTAACATCAATGGAG+CGG + Chr4:90624867-90624886 None:intergenic 30.0%
AATGTAAATTATGACCGATG+GGG - Chr4:90623496-90623515 MsG0480023863.01.T01:intron 30.0%
AATGTTGGGGGAAATAAAAT+TGG - Chr4:90625389-90625408 MsG0480023863.01.T01:five_prime_UTR 30.0%
AATTGAAATTACTTACGGCT+GGG + Chr4:90628162-90628181 None:intergenic 30.0%
ACATTTCTCAAAGTTGTCAA+TGG - Chr4:90627673-90627692 MsG0480023863.01.T02:intron 30.0%
ACTTCAACCATATTTGTACA+GGG + Chr4:90629565-90629584 None:intergenic 30.0%
AGCAAAAATGGTAGAATAGA+AGG - Chr4:90623150-90623169 MsG0480023863.01.T01:intron 30.0%
AGTGAAGAAAAGGGAATAAA+GGG + Chr4:90621825-90621844 None:intergenic 30.0%
ATCTACAGAATCATATGCAT+GGG - Chr4:90623578-90623597 MsG0480023863.01.T01:intron 30.0%
ATGTAAACCATGTCTAGTAA+TGG + Chr4:90626733-90626752 None:intergenic 30.0%
ATTGATTACCCATGTTTGAA+GGG + Chr4:90628785-90628804 None:intergenic 30.0%
ATTGCCTGTCAATTTATGTT+AGG - Chr4:90628607-90628626 MsG0480023863.01.T02:intron 30.0%
ATTTCTCAAAGTTGTCAATG+GGG - Chr4:90627675-90627694 MsG0480023863.01.T02:intron 30.0%
CAAAGAAAGAGTGAAGAAAA+GGG + Chr4:90621834-90621853 None:intergenic 30.0%
CAAATTCTGGTGATAACAAT+TGG - Chr4:90627049-90627068 MsG0480023863.01.T02:CDS 30.0%
CAGACAACATTATAAAAAGC+TGG + Chr4:90624200-90624219 None:intergenic 30.0%
CAGAGTTAGATATTTGCAAT+CGG - Chr4:90623849-90623868 MsG0480023863.01.T01:CDS 30.0%
CATTTCTCAAAGTTGTCAAT+GGG - Chr4:90627674-90627693 MsG0480023863.01.T02:intron 30.0%
CCAACTGAAATATAGAATTG+AGG + Chr4:90629200-90629219 None:intergenic 30.0%
CCTCAATTCTATATTTCAGT+TGG - Chr4:90629197-90629216 MsG0480023863.01.T02:intron 30.0%
CTAGAGGAGACTAATTAATT+AGG + Chr4:90624018-90624037 None:intergenic 30.0%
CTTAATTAGGTCATCTATCA+GGG + Chr4:90625814-90625833 None:intergenic 30.0%
GAAGATAATCGTATAACTGA+TGG - Chr4:90626407-90626426 MsG0480023863.01.T01:five_prime_UTR 30.0%
GAGACATGTATAAATAATGG+AGG - Chr4:90623617-90623636 MsG0480023863.01.T01:CDS 30.0%
GAGTACATTATATCTGATAG+AGG + Chr4:90625176-90625195 None:intergenic 30.0%
GAGTGAATAATCATGTTTGA+GGG - Chr4:90622466-90622485 MsG0480023863.01.T01:intron 30.0%
GTACAACATGATATATTGGA+AGG + Chr4:90624657-90624676 None:intergenic 30.0%
GTCCATATAACAACCAAAAA+CGG - Chr4:90623261-90623280 MsG0480023863.01.T01:intron 30.0%
TAACAAGAGAGTAAGAAACA+AGG + Chr4:90624293-90624312 None:intergenic 30.0%
TAAGAAAATGTATCATGCTG+TGG + Chr4:90628039-90628058 None:intergenic 30.0%
TACCATGTTTGAGCAAAAAA+AGG - Chr4:90623182-90623201 MsG0480023863.01.T01:intron 30.0%
TCACAAAACCTATGTAAAAG+AGG + Chr4:90628230-90628249 None:intergenic 30.0%
TCCAATATATCATGTTGTAC+TGG - Chr4:90624657-90624676 MsG0480023863.01.T01:intron 30.0%
TCCAGTACAACATGATATAT+TGG + Chr4:90624661-90624680 None:intergenic 30.0%
TGAGTGAATAATCATGTTTG+AGG - Chr4:90622465-90622484 MsG0480023863.01.T01:intron 30.0%
TGCGAGACATGTATAAATAA+TGG - Chr4:90623614-90623633 MsG0480023863.01.T01:CDS 30.0%
TGTTGTTATAGGAAAGATGA+AGG - Chr4:90629675-90629694 MsG0480023863.01.T02:five_prime_UTR 30.0%
TGTTTCTTACTCTCTTGTTA+GGG - Chr4:90624293-90624312 MsG0480023863.01.T01:CDS 30.0%
TTGATTGGGGAAATGATAAA+AGG + Chr4:90628900-90628919 None:intergenic 30.0%
TTGTTATCACCAGAATTTGT+TGG + Chr4:90627048-90627067 None:intergenic 30.0%
TTTACTCGATGAGTAAATTC+CGG + Chr4:90624738-90624757 None:intergenic 30.0%
TTTGATGTGTTTAACAGAAG+CGG - Chr4:90622733-90622752 MsG0480023863.01.T01:intron 30.0%
! AATGGATTTGTAGATTGTGA+TGG + Chr4:90628106-90628125 None:intergenic 30.0%
! ACCGCTAAAATTGATTCTAA+CGG + Chr4:90622517-90622536 None:intergenic 30.0%
! ATATGTGTTGATGCTTTATG+TGG - Chr4:90625603-90625622 MsG0480023863.01.T01:five_prime_UTR 30.0%
! ATGTATAAATAATGGAGGCA+TGG - Chr4:90623622-90623641 MsG0480023863.01.T01:CDS 30.0%
! ATTGACAACTTTGAGAAATG+TGG + Chr4:90627674-90627693 None:intergenic 30.0%
! CAAGTGTATTTTACCGTTTT+TGG + Chr4:90623277-90623296 None:intergenic 30.0%
! CTGAGTGATATTTCTATGAA+AGG + Chr4:90627597-90627616 None:intergenic 30.0%
! GTAAAAAAGAAGTGTATCAC+AGG + Chr4:90623557-90623576 None:intergenic 30.0%
! TCTTGATTTTCCTAGAATCT+AGG - Chr4:90622256-90622275 MsG0480023863.01.T01:three_prime_UTR 30.0%
! TGATCTTAAGATTTTCTGCT+CGG - Chr4:90629504-90629523 MsG0480023863.01.T02:intron 30.0%
! TGTATAAATAATGGAGGCAT+GGG - Chr4:90623623-90623642 MsG0480023863.01.T01:CDS 30.0%
! TGTTATCACCAGAATTTGTT+GGG + Chr4:90627047-90627066 None:intergenic 30.0%
! TTGTTTCTTACTCTCTTGTT+AGG - Chr4:90624292-90624311 MsG0480023863.01.T01:CDS 30.0%
! TTTGGTTGATGCTTTATGAT+TGG - Chr4:90628681-90628700 MsG0480023863.01.T02:intron 30.0%
!! GAGTTGATAATTATTGGTTG+TGG - Chr4:90629311-90629330 MsG0480023863.01.T02:intron 30.0%
!! TAATAAGAATGATGGGTAAC+TGG - Chr4:90628459-90628478 MsG0480023863.01.T02:intron 30.0%
!! TTAAAAAGGTTGGTGTAGAT+AGG + Chr4:90623069-90623088 None:intergenic 30.0%
!! TTTAGTGTGTTTTTGATGAC+CGG - Chr4:90624602-90624621 MsG0480023863.01.T01:intron 30.0%
!! TTTCTGAGTTGGTGAAATTA+CGG + Chr4:90621886-90621905 None:intergenic 30.0%
!!! AATTTTTTGCTCTTGGAAAG+TGG - Chr4:90629082-90629101 MsG0480023863.01.T02:intron 30.0%
!!! ACGATTGTTTTTGTGTAAGT+TGG - Chr4:90625903-90625922 MsG0480023863.01.T01:five_prime_UTR 30.0%
!!! TACCGTTTTTGGTTGTTATA+TGG + Chr4:90623266-90623285 None:intergenic 30.0%
!!! TACCTTTTTTTGCTCAAACA+TGG + Chr4:90623187-90623206 None:intergenic 30.0%
!!! TTTTTTGTTTAAGCTGCTGA+CGG + Chr4:90621976-90621995 None:intergenic 30.0%
AAAGCGGTAAGCTAATGATT+TGG + Chr4:90627987-90628006 None:intergenic 35.0%
AACACATATGCACAACACAT+TGG + Chr4:90625592-90625611 None:intergenic 35.0%
AACTAGACCTATCACTGAAA+CGG + Chr4:90626262-90626281 None:intergenic 35.0%
AAGATAGATTTGGAGATGGA+CGG - Chr4:90626378-90626397 MsG0480023863.01.T01:five_prime_UTR 35.0%
AAGTTAAGCTTGAGACTATC+AGG - Chr4:90626932-90626951 MsG0480023863.01.T01:five_prime_UTR 35.0%
AATGTGGCTCAGTATTTACT+TGG - Chr4:90626636-90626655 MsG0480023863.01.T01:five_prime_UTR 35.0%
AATGTTACGATACTGCTCAA+AGG + Chr4:90627226-90627245 None:intergenic 35.0%
ACAAGAGAGTAAGAAACAAG+GGG + Chr4:90624291-90624310 None:intergenic 35.0%
ACCTAAAACATTACTCGTCT+AGG + Chr4:90629784-90629803 None:intergenic 35.0%
ACTACTATGATTGCAGAGAA+CGG - Chr4:90626868-90626887 MsG0480023863.01.T01:five_prime_UTR 35.0%
ACTCATTCTTTACCTGATAG+CGG - Chr4:90624963-90624982 MsG0480023863.01.T01:CDS 35.0%
ACTGTAGACATAAAACCAAG+TGG - Chr4:90627726-90627745 MsG0480023863.01.T02:intron 35.0%
ACTTGATCAGGTAAAGATGA+TGG + Chr4:90627163-90627182 None:intergenic 35.0%
ACTTTACAACCTTTACTTGG+AGG + Chr4:90625144-90625163 None:intergenic 35.0%
AGTCACTTGTATGAGTGTTT+GGG + Chr4:90626009-90626028 None:intergenic 35.0%
ATAAACCGTGCAAAATCTCA+GGG - Chr4:90628959-90628978 MsG0480023863.01.T02:CDS 35.0%
ATACAATGCACCTAGATTCT+AGG + Chr4:90622269-90622288 None:intergenic 35.0%
ATAGAAGGAAACTGCATTCA+AGG + Chr4:90628711-90628730 None:intergenic 35.0%
ATAGTGTGTTATGGTGATCA+TGG - Chr4:90629833-90629852 MsG0480023863.01.T02:five_prime_UTR 35.0%
ATGTAGTGGTAACCATTCAA+TGG - Chr4:90622980-90622999 MsG0480023863.01.T01:CDS 35.0%
ATGTCTACAGTAGAAGTTTG+TGG + Chr4:90627717-90627736 None:intergenic 35.0%
ATTCAACAATCTACACCAGT+AGG - Chr4:90627487-90627506 MsG0480023863.01.T02:intron 35.0%
ATTGAAATTACTTACGGCTG+GGG + Chr4:90628161-90628180 None:intergenic 35.0%
ATTGCTTGATTGGATTGACT+TGG - Chr4:90622691-90622710 MsG0480023863.01.T01:intron 35.0%
ATTGTGAACCCAACAAATTC+TGG - Chr4:90627036-90627055 MsG0480023863.01.T02:CDS 35.0%
ATTTCTACAAAGTTCGCCTT+AGG + Chr4:90623028-90623047 None:intergenic 35.0%
CACTGCTTAATAGTGTGTTA+TGG - Chr4:90629824-90629843 MsG0480023863.01.T02:five_prime_UTR 35.0%
CAGATCAGCATACAAATTGA+AGG + Chr4:90622208-90622227 None:intergenic 35.0%
CAGTTAATGCATCTTCGATT+CGG + Chr4:90622826-90622845 None:intergenic 35.0%
CATCTACAGAATCATATGCA+TGG - Chr4:90623577-90623596 MsG0480023863.01.T01:intron 35.0%
CATCTCCAAATCTATCTTCA+CGG + Chr4:90626376-90626395 None:intergenic 35.0%
CATGCATATGATTCTGTAGA+TGG + Chr4:90623579-90623598 None:intergenic 35.0%
CCAAAGAAAGAGTGAAGAAA+AGG + Chr4:90621835-90621854 None:intergenic 35.0%
CTTCAACCATATTTGTACAG+GGG + Chr4:90629564-90629583 None:intergenic 35.0%
CTTTATCAAGCGTGTTTATG+TGG - Chr4:90625083-90625102 MsG0480023863.01.T01:intron 35.0%
GACACTTTACAACCTTTACT+TGG + Chr4:90625147-90625166 None:intergenic 35.0%
GAGACTAATTAATTAGGGCA+GGG + Chr4:90624012-90624031 None:intergenic 35.0%
GAGTGAAGAAAAGGGAATAA+AGG + Chr4:90621826-90621845 None:intergenic 35.0%
GATAATCGTATAACTGATGG+AGG - Chr4:90626410-90626429 MsG0480023863.01.T01:five_prime_UTR 35.0%
GATTGATTACCCATGTTTGA+AGG + Chr4:90628786-90628805 None:intergenic 35.0%
GCTAAAAAGCAATGTAAACG+AGG + Chr4:90623675-90623694 None:intergenic 35.0%
GCTTAATTAGGTCATCTATC+AGG + Chr4:90625815-90625834 None:intergenic 35.0%
GGTGTAGATTGTTGAATAGT+AGG + Chr4:90627484-90627503 None:intergenic 35.0%
GTGAAGAAAAGGGAATAAAG+GGG + Chr4:90621824-90621843 None:intergenic 35.0%
GTTGATGCTTTATGTGGATT+GGG - Chr4:90625609-90625628 MsG0480023863.01.T01:five_prime_UTR 35.0%
TAAGAAGTCGATAATACCTC+AGG + Chr4:90627765-90627784 None:intergenic 35.0%
TACAAGTCACAATGATGTAG+TGG - Chr4:90622966-90622985 MsG0480023863.01.T01:CDS 35.0%
TAGAATCTAGGTGCATTGTA+TGG - Chr4:90622268-90622287 MsG0480023863.01.T01:three_prime_UTR 35.0%
TAGTCACTTGTATGAGTGTT+TGG + Chr4:90626010-90626029 None:intergenic 35.0%
TATCATGTTGTACTGGAGAT+AGG - Chr4:90624664-90624683 MsG0480023863.01.T01:intron 35.0%
TATGACAAACCTCCAAGTAA+AGG - Chr4:90625132-90625151 MsG0480023863.01.T01:intron 35.0%
TCAAGGTTTCTGTTATAGCA+AGG + Chr4:90624044-90624063 None:intergenic 35.0%
TCAGTTAGAACCCTAAAAGT+TGG + Chr4:90622063-90622082 None:intergenic 35.0%
TCGAGTAAAATCAATCTCCA+TGG - Chr4:90624749-90624768 MsG0480023863.01.T01:CDS 35.0%
TCTCCCAAAATTTCTCTAAC+AGG + Chr4:90626509-90626528 None:intergenic 35.0%
TCTTTACCTGATCAAGTTTC+TGG - Chr4:90627166-90627185 MsG0480023863.01.T02:intron 35.0%
TGAAATAGTTACCTTGGCAT+TGG + Chr4:90629018-90629037 None:intergenic 35.0%
TGAAGAAAAGGGAATAAAGG+GGG + Chr4:90621823-90621842 None:intergenic 35.0%
TGCAGGTGAAACAGATAAAA+AGG + Chr4:90627264-90627283 None:intergenic 35.0%
TGTAGTGGTAACCATTCAAT+GGG - Chr4:90622981-90623000 MsG0480023863.01.T01:CDS 35.0%
TGTCTTTCTTGATCATATCC+AGG + Chr4:90626299-90626318 None:intergenic 35.0%
TGTTATAGCAAGGAATCTAG+AGG + Chr4:90624034-90624053 None:intergenic 35.0%
TGTTCGTATGTATCCTCATA+AGG + Chr4:90626239-90626258 None:intergenic 35.0%
TGTTGATGCTTTATGTGGAT+TGG - Chr4:90625608-90625627 MsG0480023863.01.T01:five_prime_UTR 35.0%
TTCCTTTCCATTACTAGACA+TGG - Chr4:90626723-90626742 MsG0480023863.01.T01:five_prime_UTR 35.0%
TTCTGAACGTAGCTAAGAAA+TGG - Chr4:90624229-90624248 MsG0480023863.01.T01:intron 35.0%
TTGTGCAGTAAATTTAGCCA+TGG + Chr4:90624769-90624788 None:intergenic 35.0%
TTTACTTGGAGGTTTGTCAT+AGG + Chr4:90625133-90625152 None:intergenic 35.0%
TTTCTTAACTATTTCCCCAC+AGG + Chr4:90625650-90625669 None:intergenic 35.0%
TTTGTAGATTGTGATGGTTG+TGG + Chr4:90628100-90628119 None:intergenic 35.0%
! AACCATGTCTAGTAATGGAA+AGG + Chr4:90626728-90626747 None:intergenic 35.0%
! ACATGTCCATGATCTACTTT+TGG + Chr4:90625963-90625982 None:intergenic 35.0%
! ATGGACTGAAATAGTTACCT+TGG + Chr4:90629024-90629043 None:intergenic 35.0%
! CCACGGATTAAGTTATAAAG+CGG + Chr4:90628003-90628022 None:intergenic 35.0%
! CCCGTTAGAATCAATTTTAG+CGG - Chr4:90622513-90622532 MsG0480023863.01.T01:intron 35.0%
! CCGCTAAAATTGATTCTAAC+GGG + Chr4:90622516-90622535 None:intergenic 35.0%
! CCTTTTCTTCACTCTTTCTT+TGG - Chr4:90621832-90621851 MsG0480023863.01.T01:three_prime_UTR 35.0%
! CGAGTGGATTTACATTTGAA+AGG + Chr4:90627114-90627133 None:intergenic 35.0%
! CTTTCAGTTAATGCACGTTT+TGG - Chr4:90628663-90628682 MsG0480023863.01.T02:intron 35.0%
! GCACATTTCCTCTTTTACAT+AGG - Chr4:90628219-90628238 MsG0480023863.01.T02:intron 35.0%
! GTAAAGGTCTTTTCTGTTCA+TGG - Chr4:90629932-90629951 MsG0480023863.01.T02:five_prime_UTR 35.0%
! TACTAGTTCAAGGGTGTATT+TGG + Chr4:90626073-90626092 None:intergenic 35.0%
! TCTTCTTCTTCTTAGTTCTC+AGG - Chr4:90622145-90622164 MsG0480023863.01.T01:three_prime_UTR 35.0%
! TTTTATCTGTTTCACCTGCA+GGG - Chr4:90627264-90627283 MsG0480023863.01.T02:intron 35.0%
! TTTTTATCTGTTTCACCTGC+AGG - Chr4:90627263-90627282 MsG0480023863.01.T02:intron 35.0%
!! AACTGATGGAGGTATTAAGA+TGG - Chr4:90626421-90626440 MsG0480023863.01.T01:five_prime_UTR 35.0%
!! AAGTTGGTATAAAAGAGACG+TGG + Chr4:90622047-90622066 None:intergenic 35.0%
!! ATTACTATCGGTTGGTGATT+CGG - Chr4:90628272-90628291 MsG0480023863.01.T02:intron 35.0%
!! GTTTTGGCACGTATAAGAAT+TGG + Chr4:90624828-90624847 None:intergenic 35.0%
!!! AATTGGGACTTTTGGTAATG+AGG - Chr4:90629381-90629400 MsG0480023863.01.T02:intron 35.0%
!!! ATTGGGACTTTTGGTAATGA+GGG - Chr4:90629382-90629401 MsG0480023863.01.T02:intron 35.0%
!!! TTGCATTTTTGCTATTCGAC+AGG - Chr4:90623910-90623929 MsG0480023863.01.T01:intron 35.0%
AAAGGCTGGAATGTTGAAGT+AGG - Chr4:90628528-90628547 MsG0480023863.01.T02:intron 40.0%
AACTGAATGTGTAGGCATCA+AGG - Chr4:90629358-90629377 MsG0480023863.01.T02:intron 40.0%
AATGTATCATGCTGTGGTAC+TGG + Chr4:90628033-90628052 None:intergenic 40.0%
AATGTGCACAAACTATCACC+AGG + Chr4:90628206-90628225 None:intergenic 40.0%
ACAAATACTTACCCGCTATC+AGG + Chr4:90624978-90624997 None:intergenic 40.0%
ACACATTCAGTTACGTGTCA+AGG + Chr4:90629350-90629369 None:intergenic 40.0%
ACAGCTTACGTCAGTAAAGT+GGG - Chr4:90623452-90623471 MsG0480023863.01.T01:intron 40.0%
ACATATTCATGCCTCAGCAA+TGG - Chr4:90628863-90628882 MsG0480023863.01.T02:intron 40.0%
ACCAAAAAGCCTTCCTTATG+AGG - Chr4:90626223-90626242 MsG0480023863.01.T01:five_prime_UTR 40.0%
ACTTCAAGAAGGAGGAAATC+AGG - Chr4:90624800-90624819 MsG0480023863.01.T01:CDS 40.0%
AGAGAGAGATCTTTCTGAGT+TGG + Chr4:90621897-90621916 None:intergenic 40.0%
AGATGCTAATGAAGCAACAC+TGG + Chr4:90627360-90627379 None:intergenic 40.0%
AGCATCTTCTGGATTGACAA+TGG - Chr4:90627373-90627392 MsG0480023863.01.T02:intron 40.0%
ATGAGCTGATGAATTCGAGA+AGG - Chr4:90629740-90629759 MsG0480023863.01.T02:five_prime_UTR 40.0%
ATGCATTAACTGCAACAGCA+TGG - Chr4:90622834-90622853 MsG0480023863.01.T01:intron 40.0%
ATGTGTAGGCATCAAGGAAT+TGG - Chr4:90629364-90629383 MsG0480023863.01.T02:intron 40.0%
ATTTCACTTGCTTGAAGAGC+AGG + Chr4:90622872-90622891 None:intergenic 40.0%
ATTTCAGTTGGTTGCTTGAG+TGG - Chr4:90629209-90629228 MsG0480023863.01.T02:intron 40.0%
CAAGAGAGTAAGAAACAAGG+GGG + Chr4:90624290-90624309 None:intergenic 40.0%
CATAAACCGTGCAAAATCTC+AGG - Chr4:90628958-90628977 MsG0480023863.01.T02:CDS 40.0%
CATATTCATGCCTCAGCAAT+GGG - Chr4:90628864-90628883 MsG0480023863.01.T02:intron 40.0%
CATGAATATGTGCTTGTGGA+GGG + Chr4:90628854-90628873 None:intergenic 40.0%
CCAAAATTTCTCTAACAGGC+CGG + Chr4:90626505-90626524 None:intergenic 40.0%
CCAAGTGTGTACTAGTTCAA+GGG + Chr4:90626082-90626101 None:intergenic 40.0%
CCGCTTTATAACTTAATCCG+TGG - Chr4:90628000-90628019 MsG0480023863.01.T02:intron 40.0%
CCTTCTATGTCATCTTTGCA+AGG - Chr4:90628723-90628742 MsG0480023863.01.T02:intron 40.0%
CCTTGCAAAGATGACATAGA+AGG + Chr4:90628726-90628745 None:intergenic 40.0%
CGTATGTATCCTCATAAGGA+AGG + Chr4:90626235-90626254 None:intergenic 40.0%
CGTGAAGATAGATTTGGAGA+TGG - Chr4:90626374-90626393 MsG0480023863.01.T01:five_prime_UTR 40.0%
CTAAAGCACATCATGCACTT+TGG + Chr4:90628303-90628322 None:intergenic 40.0%
CTAATGAAGCAACACTGGAT+GGG + Chr4:90627355-90627374 None:intergenic 40.0%
CTCAAGCTTAACTTCTGATG+AGG + Chr4:90626926-90626945 None:intergenic 40.0%
CTCATACAAGTGACTATGCT+TGG - Chr4:90626014-90626033 MsG0480023863.01.T01:five_prime_UTR 40.0%
CTCATTCTTTACCTGATAGC+GGG - Chr4:90624964-90624983 MsG0480023863.01.T01:CDS 40.0%
CTCTGCAATCATAGTAGTCA+AGG + Chr4:90626866-90626885 None:intergenic 40.0%
CTTTCAATAATGCACTCCCA+TGG - Chr4:90627405-90627424 MsG0480023863.01.T02:intron 40.0%
GAAGAAAAGGGAATAAAGGG+GGG + Chr4:90621822-90621841 None:intergenic 40.0%
GAAGTTAGTGCACTTCAAGA+AGG - Chr4:90624789-90624808 MsG0480023863.01.T01:CDS 40.0%
GATACTGCAAATTAGGCCAT+GGG + Chr4:90627424-90627443 None:intergenic 40.0%
GATGGGTAACTGGTATATGA+TGG - Chr4:90628469-90628488 MsG0480023863.01.T02:intron 40.0%
GCAGTAAACCCTTCAAACAT+GGG - Chr4:90628774-90628793 MsG0480023863.01.T02:intron 40.0%
GCGTCTTAATAAGACAAACC+TGG + Chr4:90627528-90627547 None:intergenic 40.0%
GGAAGTTCATATCTTCCACT+TGG + Chr4:90627744-90627763 None:intergenic 40.0%
GGAGACTAATTAATTAGGGC+AGG + Chr4:90624013-90624032 None:intergenic 40.0%
GGGAACAGAAGATGTATTAC+AGG + Chr4:90627621-90627640 None:intergenic 40.0%
GGGAACTGCTATAATCTCTT+TGG + Chr4:90623992-90624011 None:intergenic 40.0%
GGGGGAAATAAAATTGGTAC+TGG - Chr4:90625395-90625414 MsG0480023863.01.T01:five_prime_UTR 40.0%
GGTTCGTTGATCACATCAAA+TGG + Chr4:90628124-90628143 None:intergenic 40.0%
GTTGCTTCATTAGCATCTTC+TGG - Chr4:90627362-90627381 MsG0480023863.01.T02:intron 40.0%
GTTTCCTCTCGACTAAAGAA+TGG + Chr4:90629596-90629615 None:intergenic 40.0%
TAAACCGTGCAAAATCTCAG+GGG - Chr4:90628960-90628979 MsG0480023863.01.T02:CDS 40.0%
TACAGCTTACGTCAGTAAAG+TGG - Chr4:90623451-90623470 MsG0480023863.01.T01:intron 40.0%
TAGAGAACTTAAGAGGCCTA+AGG - Chr4:90623009-90623028 MsG0480023863.01.T01:CDS 40.0%
TAGATCAGCAACTGAATGGT+AGG - Chr4:90629428-90629447 MsG0480023863.01.T02:intron 40.0%
TATGTGGATAGGAGATTCAC+TGG - Chr4:90625099-90625118 MsG0480023863.01.T01:intron 40.0%
TCAAGCGTGTTTATGTGGAT+AGG - Chr4:90625088-90625107 MsG0480023863.01.T01:intron 40.0%
TCATCTGACATTGAAAAGGC+TGG - Chr4:90628514-90628533 MsG0480023863.01.T02:intron 40.0%
TGACACGTAACTGAATGTGT+AGG - Chr4:90629350-90629369 MsG0480023863.01.T02:intron 40.0%
TGAGGAATTACTGGAGCAAT+AGG + Chr4:90626991-90627010 None:intergenic 40.0%
TGATACTGCAAATTAGGCCA+TGG + Chr4:90627425-90627444 None:intergenic 40.0%
TGCAGTAAACCCTTCAAACA+TGG - Chr4:90628773-90628792 MsG0480023863.01.T02:intron 40.0%
TGCTGCTGATACTGCAAATT+AGG + Chr4:90627431-90627450 None:intergenic 40.0%
TGGAAGATATGAACTTCCTG+AGG - Chr4:90627746-90627765 MsG0480023863.01.T02:intron 40.0%
TGGGTAATCAATCTCTTTCC+TGG - Chr4:90628793-90628812 MsG0480023863.01.T02:intron 40.0%
TGTACCATTCTTTAGTCGAG+AGG - Chr4:90629589-90629608 MsG0480023863.01.T02:intron 40.0%
TGTGATGGTTGTGGAAAACT+CGG + Chr4:90628091-90628110 None:intergenic 40.0%
TGTGTAGGCATCAAGGAATT+GGG - Chr4:90629365-90629384 MsG0480023863.01.T02:intron 40.0%
TTACCTCAGTGCAACATCAA+AGG + Chr4:90627079-90627098 None:intergenic 40.0%
TTATTCAAAGCTCCACCTAC+TGG + Chr4:90627505-90627524 None:intergenic 40.0%
TTCTGATGAGGTTCCATTAC+TGG + Chr4:90626914-90626933 None:intergenic 40.0%
TTTCAGTTGGTTGCTTGAGT+GGG - Chr4:90629210-90629229 MsG0480023863.01.T02:intron 40.0%
TTTGTTTGCACAAACTGCAG+TGG - Chr4:90624347-90624366 MsG0480023863.01.T01:CDS 40.0%
! AGTCATTGATTATTGGAGGG+CGG + Chr4:90626349-90626368 None:intergenic 40.0%
! ATAAATAATGGAGGCATGGG+TGG - Chr4:90623626-90623645 MsG0480023863.01.T01:CDS 40.0%
! CATCAAGGAATTGGGACTTT+TGG - Chr4:90629373-90629392 MsG0480023863.01.T02:intron 40.0%
! CATGGGAGTGCATTATTGAA+AGG + Chr4:90627407-90627426 None:intergenic 40.0%
! CGGCCTGTTAGAGAAATTTT+GGG - Chr4:90626503-90626522 MsG0480023863.01.T01:five_prime_UTR 40.0%
! GAAGGGGTTGTTATTGTCAA+CGG - Chr4:90623105-90623124 MsG0480023863.01.T01:intron 40.0%
! GCCAGTCATTGATTATTGGA+GGG + Chr4:90626352-90626371 None:intergenic 40.0%
! GCCTAGACGAGTAATGTTTT+AGG - Chr4:90629780-90629799 MsG0480023863.01.T02:five_prime_UTR 40.0%
! TCCTCATAAGGAAGGCTTTT+TGG + Chr4:90626227-90626246 None:intergenic 40.0%
! TTCAGTGATAGGTCTAGTTC+AGG - Chr4:90626263-90626282 MsG0480023863.01.T01:five_prime_UTR 40.0%
!! AAGATGATGGAACTGACAAC+TGG + Chr4:90627150-90627169 None:intergenic 40.0%
!! AGATGATGGAACTGACAACT+GGG + Chr4:90627149-90627168 None:intergenic 40.0%
!! ATGATGTGCTTTAGAGCCAT+TGG - Chr4:90628309-90628328 MsG0480023863.01.T02:intron 40.0%
!! CACTGAGGTAAAAGTATCTC+AGG - Chr4:90627088-90627107 MsG0480023863.01.T02:intron 40.0%
!!! AGAGCCTTTTTTCCATTAGG+TGG + Chr4:90626777-90626796 None:intergenic 40.0%
!!! CTTTTTTCCATTAGGTGGGT+GGG + Chr4:90626772-90626791 None:intergenic 40.0%
!!! GAGCCTTTTTTCCATTAGGT+GGG + Chr4:90626776-90626795 None:intergenic 40.0%
AAAGATCTCTCTCTCTTCCC+TGG - Chr4:90621903-90621922 MsG0480023863.01.T01:three_prime_UTR 45.0%
AAAGGGAATAAAGGGGGGTA+AGG + Chr4:90621817-90621836 None:intergenic 45.0%
AAATGCTAACCAGTACCCCT+GGG + Chr4:90625791-90625810 None:intergenic 45.0%
AAATGTGGCACTAGCGTACT+TGG + Chr4:90627659-90627678 None:intergenic 45.0%
ACACTCCAGCATAGAGAGAT+CGG - Chr4:90629614-90629633 MsG0480023863.01.T02:five_prime_UTR 45.0%
ACATTACTCGTCTAGGCGAA+AGG + Chr4:90629777-90629796 None:intergenic 45.0%
ACGAACACCGTTTCAGTGAT+AGG - Chr4:90626252-90626271 MsG0480023863.01.T01:five_prime_UTR 45.0%
AGGATGATTCCTATGACACC+AGG - Chr4:90626177-90626196 MsG0480023863.01.T01:five_prime_UTR 45.0%
AGTAGCTTGGCATCCAGTAA+TGG - Chr4:90626898-90626917 MsG0480023863.01.T01:five_prime_UTR 45.0%
ATCTTCTGTTCCCACGATAC+AGG - Chr4:90627628-90627647 MsG0480023863.01.T02:intron 45.0%
ATGGCTACCACAACACAGTA+GGG + Chr4:90625513-90625532 None:intergenic 45.0%
ATGTCTCGCAAGTTGTCCAT+GGG + Chr4:90623604-90623623 None:intergenic 45.0%
CAACAATCTACACCAGTAGG+TGG - Chr4:90627490-90627509 MsG0480023863.01.T02:intron 45.0%
CAGTAATGTTGACAGGCTTC+GGG - Chr4:90625059-90625078 MsG0480023863.01.T01:intron 45.0%
CATTACTCGTCTAGGCGAAA+GGG + Chr4:90629776-90629795 None:intergenic 45.0%
CCAACAGCAGATGTGAACAA+CGG + Chr4:90627458-90627477 None:intergenic 45.0%
CCACCCACCTAATGGAAAAA+AGG - Chr4:90626770-90626789 MsG0480023863.01.T01:five_prime_UTR 45.0%
CCAGTAATGTTGACAGGCTT+CGG - Chr4:90625058-90625077 MsG0480023863.01.T01:intron 45.0%
CCCTTGAACTAGTACACACT+TGG - Chr4:90626079-90626098 MsG0480023863.01.T01:five_prime_UTR 45.0%
CTTGTGCTGCATCTCATACA+GGG - Chr4:90626149-90626168 MsG0480023863.01.T01:five_prime_UTR 45.0%
GAGGCATGAATATGTGCTTG+TGG + Chr4:90628858-90628877 None:intergenic 45.0%
GCATGAATATGTGCTTGTGG+AGG + Chr4:90628855-90628874 None:intergenic 45.0%
GCCAAGTGTGTACTAGTTCA+AGG + Chr4:90626083-90626102 None:intergenic 45.0%
GCCAATATCTGCCTGTCAAT+GGG - Chr4:90629697-90629716 MsG0480023863.01.T02:five_prime_UTR 45.0%
GCCCTCCAATAATCAATGAC+TGG - Chr4:90626348-90626367 MsG0480023863.01.T01:five_prime_UTR 45.0%
GCTAATGAAGCAACACTGGA+TGG + Chr4:90627356-90627375 None:intergenic 45.0%
GCTTTGTACAGCTCAGAATG+AGG + Chr4:90621864-90621883 None:intergenic 45.0%
GGAATTACTGGAGCAATAGG+TGG + Chr4:90626988-90627007 None:intergenic 45.0%
GGAGATGACAAGTCGACTAA+AGG - Chr4:90622754-90622773 MsG0480023863.01.T01:CDS 45.0%
GGCCTCTTAAGTTCTCTACA+CGG + Chr4:90623007-90623026 None:intergenic 45.0%
GGGTGCAACAAATTGATGCT+TGG + Chr4:90629544-90629563 None:intergenic 45.0%
GTAAATTATGACCGATGGGG+AGG - Chr4:90623499-90623518 MsG0480023863.01.T01:intron 45.0%
GTGTGTATGTCGTGAGTGTA+AGG - Chr4:90625290-90625309 MsG0480023863.01.T01:CDS 45.0%
GTTAGTGCACTTCAAGAAGG+AGG - Chr4:90624792-90624811 MsG0480023863.01.T01:CDS 45.0%
GTTGCACCCCTGTACAAATA+TGG - Chr4:90629555-90629574 MsG0480023863.01.T02:intron 45.0%
GTTGCGAAGATGTTCACAGT+TGG + Chr4:90627329-90627348 None:intergenic 45.0%
TAATGGCTCAACACTCACAC+AGG - Chr4:90626586-90626605 MsG0480023863.01.T01:five_prime_UTR 45.0%
TATACTTGGTCCCATTGCTG+AGG + Chr4:90628877-90628896 None:intergenic 45.0%
TCATGCTAACTAGTGCCTGT+GGG - Chr4:90625632-90625651 MsG0480023863.01.T01:five_prime_UTR 45.0%
TCCCATTGACAGGCAGATAT+TGG + Chr4:90629701-90629720 None:intergenic 45.0%
TCTTCTGTTCCCACGATACA+GGG - Chr4:90627629-90627648 MsG0480023863.01.T02:intron 45.0%
TCTTGTGCTGCATCTCATAC+AGG - Chr4:90626148-90626167 MsG0480023863.01.T01:five_prime_UTR 45.0%
TCTTTCGCTGTGATTTCTGC+AGG - Chr4:90627846-90627865 MsG0480023863.01.T02:intron 45.0%
TGGACTCCAGAAACTTGATC+AGG + Chr4:90627175-90627194 None:intergenic 45.0%
TGGGTTCACAATTTGAGCCA+CGG + Chr4:90627028-90627047 None:intergenic 45.0%
TGTGTGGCTTGAGGAATTAC+TGG + Chr4:90627000-90627019 None:intergenic 45.0%
TTCCTATGACACCAGGAAGA+CGG - Chr4:90626184-90626203 MsG0480023863.01.T01:five_prime_UTR 45.0%
TTTCCTTAACTAGTGCCCCA+GGG - Chr4:90625772-90625791 MsG0480023863.01.T01:five_prime_UTR 45.0%
! AGTGATAGGTCTAGTTCAGG+TGG - Chr4:90626266-90626285 MsG0480023863.01.T01:five_prime_UTR 45.0%
! ATTTGCAATCGGTTCAAGCG+AGG - Chr4:90623860-90623879 MsG0480023863.01.T01:CDS 45.0%
! CCGGCCTGTTAGAGAAATTT+TGG - Chr4:90626502-90626521 MsG0480023863.01.T01:five_prime_UTR 45.0%
! CGCCAGTCATTGATTATTGG+AGG + Chr4:90626353-90626372 None:intergenic 45.0%
! CGTTGGTGCATATGATAACG+AGG + Chr4:90628829-90628848 None:intergenic 45.0%
! CTTTGGCTCGTTCAAGAGAT+TGG + Chr4:90626451-90626470 None:intergenic 45.0%
! GGTGCATATGATAACGAGGA+GGG + Chr4:90628825-90628844 None:intergenic 45.0%
! TACCAAAGTATCCTCCCCAT+CGG + Chr4:90623513-90623532 None:intergenic 45.0%
! TCGGCATGGACTGTAACAAT+GGG + Chr4:90628072-90628091 None:intergenic 45.0%
! TGGTGCATATGATAACGAGG+AGG + Chr4:90628826-90628845 None:intergenic 45.0%
!! AGGTGGAGCTTTGAATAACC+AGG - Chr4:90627507-90627526 MsG0480023863.01.T02:intron 45.0%
!! ATGTGCTTTAGAGCCATTGG+TGG - Chr4:90628312-90628331 MsG0480023863.01.T02:intron 45.0%
!! CTTGGCATTGGCACATTAGT+GGG + Chr4:90629006-90629025 None:intergenic 45.0%
!! GATCAAGTTTCTGGAGTCCA+AGG - Chr4:90627175-90627194 MsG0480023863.01.T02:intron 45.0%
!! GTGGTACTGGCATATAACCA+CGG + Chr4:90628020-90628039 None:intergenic 45.0%
!! TTGGTGCCAGTAATGTTGAC+AGG - Chr4:90625052-90625071 MsG0480023863.01.T01:intron 45.0%
!!! CCTTTTTTCCATTAGGTGGG+TGG + Chr4:90626773-90626792 None:intergenic 45.0%
!!! ATTTACATTAATTTTATTAT+TGG - Chr4:90625454-90625473 MsG0480023863.01.T01:five_prime_UTR 5.0%
!!! GATTTTATTTTTTATTTTTT+TGG - Chr4:90625543-90625562 MsG0480023863.01.T01:five_prime_UTR 5.0%
AACAGTGGACAGGCTGCTAA+TGG - Chr4:90626569-90626588 MsG0480023863.01.T01:five_prime_UTR 50.0%
AATGCTAACCAGTACCCCTG+GGG + Chr4:90625790-90625809 None:intergenic 50.0%
ACTGGAGCAATAGGTGGTTC+AGG + Chr4:90626982-90627001 None:intergenic 50.0%
ACTGTACGACTCCCATTGAC+AGG + Chr4:90629711-90629730 None:intergenic 50.0%
ACTTTAAACCCCTTCCCTGC+AGG - Chr4:90629465-90629484 MsG0480023863.01.T02:intron 50.0%
AGCACAGCACAACACAACCA+GGG + Chr4:90621923-90621942 None:intergenic 50.0%
AGCAGTGACGCTACAACACA+AGG + Chr4:90629811-90629830 None:intergenic 50.0%
AGCCTGTCCACTGTTTGCTT+TGG + Chr4:90626564-90626583 None:intergenic 50.0%
AGGAAGACGGAGTCGTATCA+GGG - Chr4:90626197-90626216 MsG0480023863.01.T01:five_prime_UTR 50.0%
AGTTCAGGTGGAAGAAGTCC+TGG - Chr4:90626278-90626297 MsG0480023863.01.T01:five_prime_UTR 50.0%
ATAGGAGATTCACTGGCGAC+AGG - Chr4:90625106-90625125 MsG0480023863.01.T01:intron 50.0%
ATGGTATCCCACCCACCTAA+TGG - Chr4:90626762-90626781 MsG0480023863.01.T01:five_prime_UTR 50.0%
CATGCTAACTAGTGCCTGTG+GGG - Chr4:90625633-90625652 MsG0480023863.01.T01:five_prime_UTR 50.0%
CATGGCTACCACAACACAGT+AGG + Chr4:90625514-90625533 None:intergenic 50.0%
CATGTCTCGCAAGTTGTCCA+TGG + Chr4:90623605-90623624 None:intergenic 50.0%
CCACTAATGTGCCAATGCCA+AGG - Chr4:90629004-90629023 MsG0480023863.01.T02:intron 50.0%
CCGAAGCCTGTCAACATTAC+TGG + Chr4:90625061-90625080 None:intergenic 50.0%
CCGTTGTTCACATCTGCTGT+TGG - Chr4:90627455-90627474 MsG0480023863.01.T02:intron 50.0%
CCTCAGTGCAACATCAAAGG+AGG + Chr4:90627076-90627095 None:intergenic 50.0%
CCTCCTTTGATGTTGCACTG+AGG - Chr4:90627073-90627092 MsG0480023863.01.T02:intron 50.0%
CCTGCAGGAGGTAATCCATT+CGG - Chr4:90629480-90629499 MsG0480023863.01.T02:intron 50.0%
CTCGATGAGTAAATTCCGGC+TGG + Chr4:90624734-90624753 None:intergenic 50.0%
CTGTGTTGTGGTAGCCATGT+TGG - Chr4:90625515-90625534 MsG0480023863.01.T01:five_prime_UTR 50.0%
CTTCTGTTCCCACGATACAG+GGG - Chr4:90627630-90627649 MsG0480023863.01.T02:intron 50.0%
CTTGAACGAGCCAAAGACCT+GGG - Chr4:90626455-90626474 MsG0480023863.01.T01:five_prime_UTR 50.0%
GAAATGCTAACCAGTACCCC+TGG + Chr4:90625792-90625811 None:intergenic 50.0%
GAACCTCCCAAAGCAAACAG+TGG - Chr4:90626554-90626573 MsG0480023863.01.T01:five_prime_UTR 50.0%
GAACGGCATCTTCAGTAGCT+TGG - Chr4:90626885-90626904 MsG0480023863.01.T01:five_prime_UTR 50.0%
GAAGGGTTTACTGCAGCTGA+AGG + Chr4:90628768-90628787 None:intergenic 50.0%
GAATCATATGCATGGGCCCA+TGG - Chr4:90623585-90623604 MsG0480023863.01.T01:intron 50.0%
GATGACCGATCTCTCTATGC+TGG + Chr4:90629622-90629641 None:intergenic 50.0%
GATGTTCACAGTTGGAGCTC+CGG + Chr4:90627321-90627340 None:intergenic 50.0%
GCAACTGAATGGTAGGTCGT+CGG - Chr4:90629435-90629454 MsG0480023863.01.T02:intron 50.0%
GCCAGGGCTTCTCTTATGAT+CGG + Chr4:90626327-90626346 None:intergenic 50.0%
GCCTGTCCACTGTTTGCTTT+GGG + Chr4:90626563-90626582 None:intergenic 50.0%
GCTCAAAGAACCCAGGTCTT+TGG + Chr4:90626468-90626487 None:intergenic 50.0%
GGAGGTTCACTAATTCGCAG+AGG + Chr4:90626542-90626561 None:intergenic 50.0%
GGCCAATATCTGCCTGTCAA+TGG - Chr4:90629696-90629715 MsG0480023863.01.T02:five_prime_UTR 50.0%
GGCCGTGTAGAGAACTTAAG+AGG - Chr4:90623002-90623021 MsG0480023863.01.T01:CDS 50.0%
GTAAACGAGGCTGTTGCCTT+AGG + Chr4:90623662-90623681 None:intergenic 50.0%
GTACTAGTGTGTAGTACGCC+TGG - Chr4:90628185-90628204 MsG0480023863.01.T02:intron 50.0%
GTCATGCTAACTAGTGCCTG+TGG - Chr4:90625631-90625650 MsG0480023863.01.T01:five_prime_UTR 50.0%
GTTTAAGCTGCTGACGGTGA+TGG + Chr4:90621970-90621989 None:intergenic 50.0%
GTTTCCTTAACTAGTGCCCC+AGG - Chr4:90625771-90625790 MsG0480023863.01.T01:five_prime_UTR 50.0%
TCAAGCCACACAAACTACCG+TGG - Chr4:90627008-90627027 MsG0480023863.01.T01:five_prime_UTR 50.0%
TCAGCTCTTACTGCTACTGC+CGG - Chr4:90627299-90627318 MsG0480023863.01.T02:intron 50.0%
TCCCAAAGCAAACAGTGGAC+AGG - Chr4:90626559-90626578 MsG0480023863.01.T01:five_prime_UTR 50.0%
TCTCTACACGGCCCATTGAA+TGG + Chr4:90622995-90623014 None:intergenic 50.0%
TCTTGAACGAGCCAAAGACC+TGG - Chr4:90626454-90626473 MsG0480023863.01.T01:five_prime_UTR 50.0%
TGGCGCCGTGAAGATAGATT+TGG - Chr4:90626368-90626387 MsG0480023863.01.T01:five_prime_UTR 50.0%
TGGTTGTGGAAAACTCGGCA+TGG + Chr4:90628086-90628105 None:intergenic 50.0%
TTCCTTAACTAGTGCCCCAG+GGG - Chr4:90625773-90625792 MsG0480023863.01.T01:five_prime_UTR 50.0%
! ACGGTAGTTTGTGTGGCTTG+AGG + Chr4:90627009-90627028 None:intergenic 50.0%
! CAAAATCTCAGGGGCGTACA+TGG - Chr4:90628969-90628988 MsG0480023863.01.T02:CDS 50.0%
! CGGCGCCAGTCATTGATTAT+TGG + Chr4:90626356-90626375 None:intergenic 50.0%
! CTCGGCATGGACTGTAACAA+TGG + Chr4:90628073-90628092 None:intergenic 50.0%
! GCATATGATAACGAGGAGGG+TGG + Chr4:90628822-90628841 None:intergenic 50.0%
! GGGGTTGTTATTGTCAACGG+TGG - Chr4:90623108-90623127 MsG0480023863.01.T01:intron 50.0%
! TACGCCCCTGAGATTTTGCA+CGG + Chr4:90628967-90628986 None:intergenic 50.0%
! TGTCCACTGTTTGCTTTGGG+AGG + Chr4:90626560-90626579 None:intergenic 50.0%
! TTGAGCCACGGTAGTTTGTG+TGG + Chr4:90627016-90627035 None:intergenic 50.0%
!! CAAGTTTCTGGAGTCCAAGG+TGG - Chr4:90627178-90627197 MsG0480023863.01.T02:intron 50.0%
!! CCTTGGCATTGGCACATTAG+TGG + Chr4:90629007-90629026 None:intergenic 50.0%
!! CGAATGGATTACCTCCTGCA+GGG + Chr4:90629482-90629501 None:intergenic 50.0%
!! GGTAATGAGGGAGCTGCTTT+TGG - Chr4:90629394-90629413 MsG0480023863.01.T02:intron 50.0%
AAGACGGAGTCGTATCAGGG+AGG - Chr4:90626200-90626219 MsG0480023863.01.T01:five_prime_UTR 55.0%
ACTTGGATGCCCCTGTATCG+TGG + Chr4:90627642-90627661 None:intergenic 55.0%
CAGCACAGCACAACACAACC+AGG + Chr4:90621924-90621943 None:intergenic 55.0%
CAGGAAGACGGAGTCGTATC+AGG - Chr4:90626196-90626215 MsG0480023863.01.T01:five_prime_UTR 55.0%
CTGATACGACTCCGTCTTCC+TGG + Chr4:90626198-90626217 None:intergenic 55.0%
CTGCAAGACAGTGACCACCT+TGG + Chr4:90627195-90627214 None:intergenic 55.0%
CTTGGATGCCCCTGTATCGT+GGG + Chr4:90627641-90627660 None:intergenic 55.0%
GACCGATGGGGAGGATACTT+TGG - Chr4:90623508-90623527 MsG0480023863.01.T01:intron 55.0%
GATTACCTCCTGCAGGGAAG+GGG + Chr4:90629476-90629495 None:intergenic 55.0%
GCAGTCACCCTACTGTGTTG+TGG - Chr4:90625503-90625522 MsG0480023863.01.T01:five_prime_UTR 55.0%
GCATCTCATACAGGGCGACA+AGG - Chr4:90626157-90626176 MsG0480023863.01.T01:five_prime_UTR 55.0%
GCCGATCATAAGAGAAGCCC+TGG - Chr4:90626323-90626342 MsG0480023863.01.T01:five_prime_UTR 55.0%
GGATTACCTCCTGCAGGGAA+GGG + Chr4:90629477-90629496 None:intergenic 55.0%
GTAAGAGCTGATCCCGCCAA+AGG + Chr4:90627290-90627309 None:intergenic 55.0%
TCTCTAACAGGCCGGACAAC+AGG + Chr4:90626497-90626516 None:intergenic 55.0%
TGAACTGAGACACCCATGCC+AGG + Chr4:90627937-90627956 None:intergenic 55.0%
TGATTATTGGAGGGCGGCCA+GGG + Chr4:90626343-90626362 None:intergenic 55.0%
TGGATTACCTCCTGCAGGGA+AGG + Chr4:90629478-90629497 None:intergenic 55.0%
TGTTTCACCTGCAGGGCCTT+TGG - Chr4:90627271-90627290 MsG0480023863.01.T02:intron 55.0%
TTAAACCCCTTCCCTGCAGG+AGG - Chr4:90629468-90629487 MsG0480023863.01.T02:intron 55.0%
TTGATTATTGGAGGGCGGCC+AGG + Chr4:90626344-90626363 None:intergenic 55.0%
! TAACGAGGAGGGTGGATTCC+AGG + Chr4:90628814-90628833 None:intergenic 55.0%
! TACCCCTGGGGCACTAGTTA+AGG + Chr4:90625778-90625797 None:intergenic 55.0%
!! CCGAATGGATTACCTCCTGC+AGG + Chr4:90629483-90629502 None:intergenic 55.0%
!! CTCCGTCTTCCTGGTGTCAT+AGG + Chr4:90626189-90626208 None:intergenic 55.0%
!! TGGGACAGCATCGATTCGAG+TGG + Chr4:90627130-90627149 None:intergenic 55.0%
ACTGAGACACCCATGCCAGG+CGG + Chr4:90627934-90627953 None:intergenic 60.0%
CCAGTCCCAGGCTGGCAAAT+GGG - Chr4:90627904-90627923 MsG0480023863.01.T02:intron 60.0%
CTAACAGGCCGGACAACAGG+TGG + Chr4:90626494-90626513 None:intergenic 60.0%
CTTACGGCTGGGGCTTGAAC+TGG + Chr4:90628151-90628170 None:intergenic 60.0%
GAGGCATGGGTGGTTGCTTG+GGG - Chr4:90623636-90623655 MsG0480023863.01.T01:CDS 60.0%
GCTGGGGCTTGAACTGGTGT+TGG + Chr4:90628145-90628164 None:intergenic 60.0%
GTGCACCCATTTGCCAGCCT+GGG + Chr4:90627912-90627931 None:intergenic 60.0%
GTTGTGCTGTGCTGTGCTGC+TGG - Chr4:90621930-90621949 MsG0480023863.01.T01:three_prime_UTR 60.0%
TCAAGCGAGGCTTCGCTCCA+TGG - Chr4:90623873-90623892 MsG0480023863.01.T01:CDS 60.0%
TCCAGTCCCAGGCTGGCAAA+TGG - Chr4:90627903-90627922 MsG0480023863.01.T02:intron 60.0%
TGAGCCCACCACCTGTTGTC+CGG - Chr4:90626483-90626502 MsG0480023863.01.T01:five_prime_UTR 60.0%
TTCACCTGCAGGGCCTTTGG+CGG - Chr4:90627274-90627293 MsG0480023863.01.T02:intron 60.0%
! AACTAGTGCCCCAGGGGTAC+TGG - Chr4:90625779-90625798 MsG0480023863.01.T01:five_prime_UTR 60.0%
! GGAGGCATGGGTGGTTGCTT+GGG - Chr4:90623635-90623654 MsG0480023863.01.T01:CDS 60.0%
! TGGAGGCATGGGTGGTTGCT+TGG - Chr4:90623634-90623653 MsG0480023863.01.T01:CDS 60.0%
! TGTGCTTGTGGAGGGAGCGT+TGG + Chr4:90628846-90628865 None:intergenic 60.0%
!! GCAGCTGAAGGCGCTACACT+AGG + Chr4:90628756-90628775 None:intergenic 60.0%
!! GTGGTGGGCTCAAAGAACCC+AGG + Chr4:90626475-90626494 None:intergenic 60.0%
AATGGGTGCACCGCCTGGCA+TGG - Chr4:90627921-90627940 MsG0480023863.01.T02:intron 65.0%
ACAGGCCGGACAACAGGTGG+TGG + Chr4:90626491-90626510 None:intergenic 65.0%
ATGGGTGCACCGCCTGGCAT+GGG - Chr4:90627922-90627941 MsG0480023863.01.T02:intron 65.0%
CAGGCCGGACAACAGGTGGT+GGG + Chr4:90626490-90626509 None:intergenic 65.0%
CCCATTTGCCAGCCTGGGAC+TGG + Chr4:90627907-90627926 None:intergenic 65.0%
GGGTGGTTGCTTGGGGCCTA+AGG - Chr4:90623643-90623662 MsG0480023863.01.T01:CDS 65.0%
GGTGCACCCATTTGCCAGCC+TGG + Chr4:90627913-90627932 None:intergenic 65.0%
TCACCTGCAGGGCCTTTGGC+GGG - Chr4:90627275-90627294 MsG0480023863.01.T02:intron 65.0%
TCCTTCCCTGCTCCAGTCCC+AGG - Chr4:90627892-90627911 MsG0480023863.01.T02:intron 65.0%
TGGCAAATGGGTGCACCGCC+TGG - Chr4:90627916-90627935 MsG0480023863.01.T02:intron 65.0%
GATCCCGCCAAAGGCCCTGC+AGG + Chr4:90627281-90627300 None:intergenic 70.0%
GCCAGCCTGGGACTGGAGCA+GGG + Chr4:90627900-90627919 None:intergenic 70.0%
GCCTGGGACTGGAGCAGGGA+AGG + Chr4:90627896-90627915 None:intergenic 70.0%
TCCCTGCTCCAGTCCCAGGC+TGG - Chr4:90627896-90627915 MsG0480023863.01.T02:intron 70.0%
TGCCAGCCTGGGACTGGAGC+AGG + Chr4:90627901-90627920 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 90621798 90629970 90621798 ID=MsG0480023863.01;Name=MsG0480023863.01
Chr4 mRNA 90621798 90627031 90621798 ID=MsG0480023863.01.T01;Parent=MsG0480023863.01;Name=MsG0480023863.01.T01;_AED=0.22;_eAED=0.23;_QI=1703|0.55|0.5|0.9|0.88|0.9|10|499|411
Chr4 exon 90621798 90622396 90621798 ID=MsG0480023863.01.T01:exon:33846;Parent=MsG0480023863.01.T01
Chr4 exon 90622743 90622788 90622743 ID=MsG0480023863.01.T01:exon:33845;Parent=MsG0480023863.01.T01
Chr4 exon 90622877 90623048 90622877 ID=MsG0480023863.01.T01:exon:33844;Parent=MsG0480023863.01.T01
Chr4 exon 90623603 90623686 90623603 ID=MsG0480023863.01.T01:exon:33843;Parent=MsG0480023863.01.T01
Chr4 exon 90623796 90623900 90623796 ID=MsG0480023863.01.T01:exon:33842;Parent=MsG0480023863.01.T01
Chr4 exon 90624001 90624035 90624001 ID=MsG0480023863.01.T01:exon:33841;Parent=MsG0480023863.01.T01
Chr4 exon 90624292 90624509 90624292 ID=MsG0480023863.01.T01:exon:33840;Parent=MsG0480023863.01.T01
Chr4 exon 90624674 90624884 90624674 ID=MsG0480023863.01.T01:exon:33839;Parent=MsG0480023863.01.T01
Chr4 exon 90624958 90625054 90624958 ID=MsG0480023863.01.T01:exon:33838;Parent=MsG0480023863.01.T01
Chr4 exon 90625161 90627031 90625161 ID=MsG0480023863.01.T01:exon:33837;Parent=MsG0480023863.01.T01
Chr4 five_prime_UTR 90625329 90627031 90625329 ID=MsG0480023863.01.T01:five_prime_utr;Parent=MsG0480023863.01.T01
Chr4 CDS 90625161 90625328 90625161 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90624958 90625054 90624958 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90624674 90624884 90624674 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90624292 90624509 90624292 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90624001 90624035 90624001 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90623796 90623900 90623796 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90623603 90623686 90623603 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90622877 90623048 90622877 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90622743 90622788 90622743 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 CDS 90622297 90622396 90622297 ID=MsG0480023863.01.T01:cds;Parent=MsG0480023863.01.T01
Chr4 three_prime_UTR 90621798 90622296 90621798 ID=MsG0480023863.01.T01:three_prime_utr;Parent=MsG0480023863.01.T01
Chr4 mRNA 90626580 90629970 90626580 ID=MsG0480023863.01.T02;Parent=MsG0480023863.01;Name=MsG0480023863.01.T02;_AED=0.47;_eAED=0.48;_QI=357|0.8|0.66|1|0.4|0.33|6|0|140
Chr4 exon 90626580 90626706 90626580 ID=MsG0480023863.01.T02:exon:33852;Parent=MsG0480023863.01.T02
Chr4 exon 90626783 90626844 90626783 ID=MsG0480023863.01.T02:exon:33851;Parent=MsG0480023863.01.T02
Chr4 exon 90626947 90627082 90626947 ID=MsG0480023863.01.T02:exon:33850;Parent=MsG0480023863.01.T02
Chr4 exon 90628913 90629018 90628913 ID=MsG0480023863.01.T02:exon:33849;Parent=MsG0480023863.01.T02
Chr4 exon 90629602 90629637 90629602 ID=MsG0480023863.01.T02:exon:33848;Parent=MsG0480023863.01.T02
Chr4 exon 90629658 90629970 90629658 ID=MsG0480023863.01.T02:exon:33847;Parent=MsG0480023863.01.T02
Chr4 five_prime_UTR 90629658 90629970 90629658 ID=MsG0480023863.01.T02:five_prime_utr;Parent=MsG0480023863.01.T02
Chr4 five_prime_UTR 90629602 90629637 90629602 ID=MsG0480023863.01.T02:five_prime_utr;Parent=MsG0480023863.01.T02
Chr4 five_prime_UTR 90629011 90629018 90629011 ID=MsG0480023863.01.T02:five_prime_utr;Parent=MsG0480023863.01.T02
Chr4 CDS 90628913 90629010 90628913 ID=MsG0480023863.01.T02:cds;Parent=MsG0480023863.01.T02
Chr4 CDS 90626947 90627082 90626947 ID=MsG0480023863.01.T02:cds;Parent=MsG0480023863.01.T02
Chr4 CDS 90626783 90626844 90626783 ID=MsG0480023863.01.T02:cds;Parent=MsG0480023863.01.T02
Chr4 CDS 90626580 90626706 90626580 ID=MsG0480023863.01.T02:cds;Parent=MsG0480023863.01.T02
Gene Sequence

>MsG0480023863.01.T01

ATGGAAAGCCAATCTCTTGAACGAGCCAAAGACCTGGGTTCTTTGAGCCCACCACCTGTTGTCCGGCCTGTTAGAGAAATTTTGGGAGAAAATGTAGTACCTCTGCGAATTAGTGAACCTCCCAAAGCAAACAGTGGACAGGCTGCTAATGGCTCAACACTCACACAGGGCTTAGTTTTCCTTTCCATTACTAGACATGGTTTACATGAAATCATTATGGTATCCCACCCACCTAATGGAAAAAAGGCTCTTTTTGGTTGTTGCGAGAACGGCATCTTCAGTAGCTTGGCATCCAGTAATGGAACCTCATCAGAAGTTAAGCTTGAGACTATCAGGAGCCTTATTGATTTTGATGATGTTCCTGAACCACCTATTGCTCCAGTAATTCCTCAAGCCACACAAACTACCGTGGCTCAAATTGTGAACCCAACAAATTCTGGTGATAACAATTGGGCCTCCTTTGATGTTGCACTGAGCGCCTTTTTATCTGTTTCACCTGCAGGGCCTTTGGCGGGATCAGCTCTTACTGCTACTGCCGGAGCTCCAACTGTGAACATCTTCGCAACATTCCCATCCAGTGTTGCTTCATTAGCATCTTCTGGATTGACAATGGAATCGCAGCCTTTCAATAATGCACTCCCATGGCCTAATTTGCAGTATCAGCAGCAACAACCGTTGTTCACATCTGCTGTTGACATAAAACCAAGTGGAAGATATGAACTTCCTGAGGATCTATTCACTATAAAATATTCATCCTTCCCTGCTCCAGTCCCAGGCTGGCAAATGGGTGCACCGCCTGGCATGGGTGTCTCAGTTCAATATAATAATGTGATGTCCATGCCGAGTTTTCCACAACCATCACAATCTACAAATCCATTTGATGTGATCAACGAACCAACACCAGTTCAAGCCCCAGCCTTTCCTTCTATGTCATCTTTGCAAGGTGCTCTGCCTAGTGTAGCGCCTTCAGCTGCAGTAAACCCTTCAAACATGGGTAATCAATCTCTTTCCTGGAATCCACCCTCCTCGTTATCATATGCACCAACGCTCCCTCCACAAGCACATATTCATGCCTCAGCAATGGGACCAAGGGCGTACATGGAGCAACAACTTCCCACTAATGTGCCAATGCCAAGGCATCAAGGAATTGGGACTTTTGGTAATGAGGGAGCTGCTTTTGGCTTCTCTAATATAGATCAGCAACTGAATGGTAGGTCGTCGGCTCTGCTACTTTAA

>MsG0480023863.01.T02

ATGACAAGTCGACTAAAGGAAGATCAGAAAAATGAACGAACTATTCGAGGTCTTCTCAACTTACACCGAATCGAAGATGCATTAACTGCAACAGCATGGACAGTAAAGTTTCCCATTTCTAAACTGATTTTTTATGTTAATTTCCAGCCGGAATTTACTCATCGAGTAAAATCAATCTCCATGGCTAAATTTACTGCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAAATATTTTTCAAAGAATGGGATGCGCAAACTCATTCTTTACCTGATAGCGGTAATGTTGACAGGCTTCGGGACTTTATCAAGCGTGTTTATGTGGATAGGAGATTCACTGGCGACAGGTCCTATGACAAACCTCCAAGTAAAGGTTGTAAAGTGTCTGTTGTCCTCTATCAGATATAA
Protein sequence

>MsG0480023863.01.T01

MESQSLERAKDLGSLSPPPVVRPVREILGENVVPLRISEPPKANSGQAANGSTLTQGLVFLSITRHGLHEIIMVSHPPNGKKALFGCCENGIFSSLASSNGTSSEVKLETIRSLIDFDDVPEPPIAPVIPQATQTTVAQIVNPTNSGDNNWASFDVALSAFLSVSPAGPLAGSALTATAGAPTVNIFATFPSSVASLASSGLTMESQPFNNALPWPNLQYQQQQPLFTSAVDIKPSGRYELPEDLFTIKYSSFPAPVPGWQMGAPPGMGVSVQYNNVMSMPSFPQPSQSTNPFDVINEPTPVQAPAFPSMSSLQGALPSVAPSAAVNPSNMGNQSLSWNPPSSLSYAPTLPPQAHIHASAMGPRAYMEQQLPTNVPMPRHQGIGTFGNEGAAFGFSNIDQQLNGRSSALLL*

>MsG0480023863.01.T02

MTSRLKEDQKNERTIRGLLNLHRIEDALTATAWTVKFPISKLIFYVNFQPEFTHRVKSISMAKFTAQEVSALQEGGNQRAKEIFFKEWDAQTHSLPDSGNVDRLRDFIKRVYVDRRFTGDRSYDKPPSKGCKVSVVLYQI*